Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0013087

Physical Location & Seq

Genomic Coordinates Forward (+)

6776890 .. 6778571

Gene Structure 1682 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g09790.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1611 bp

ATGGCAAGGGTTTGCACCCGAGAACTCTTTCGATTCCGGAGCTCTATTTCCCCACACCTCGCTTCCAACCCATCAAAATCCAATCTTCCCTTACCATCCTCTCCATTTTCCTCCTCTTCGTTCGAGCCCTCTGTTAACCGCCACATCTTTTCGCTTCTGGATTCGTGTCAGAGCTTGATCCAGATTACCCAATTCCACGCCCATTTGGTCACCCAGGGCCTTTTCGATTCGTTTTGGGCCCGGAAGTTACTCAAGAGCTATTACGATTTCGGTGATTTCGATTATACTATATGGGTTTTCGGATACATTGACGCTCCAGGTAGATTTTGCGTTAATACAGTTATTAAGGCGTACTCAGTGAGTTCGGCGCCGGGCCGAGCTTTGGTGGTGTATTTGGAGTGGCTGAGAAATGGGTTTGTTCCCAACAGCTATACGATCGTGCCGGTTTTTGGGTCGTGTGCGAAAATGGCGTGTGTTGAATCTGGGAGAAAATGTCATGGGCAGGTTGTGAAGCATGGGGTGGACTCTGTGCTGCATGTGCAGAACTCTTTGATTCATATGTATTTTAGTTGTGGGGAATTGGAGCTTGCCGGGAAGATGTTCAATGAAATGCCTGAGAAGGACTTGGTGTCTTGGAATGCAATTCTCGATGGGAATGCTAGCGGCGGGAAGCCGGAGTGTGCGTTGAAGTTGTTTTGGAAAATGGTGGATGTGGGATTGAAGGGGAACGAAACTACCATGGTGAATTTGTTTGCGGCTTCCGGTCGATCTGCTAGACCAAATGAGGGAAGATCAGTTCACGGACGTCTAGTTAGCGCATTCTTGGAGTTGAATGTATTTCTTAACACAGCTTTGATTGATATGTATGGTAAATGTGAAACGGTGCAAGCAGCACGTGTGGTGTTTGAGAACACAGCGTATAGGAATCTGGTTTGTTGTAATGTAATGATTTTGGGGCATTGCATTCATGGAAATCCTGAAGATGAATTTAACATATATAGAGAAATGGTGTGTAGAACAAAGTCGAGCGATGATGAAACAATCCATGAGAAGGAGAGTTCGAGGCCAGATGATAATCAGGAAGGAATTACCCCAGATGAAGTAACTTTTGTAGGTGTTCTTTGTGCCTGTGCCCGCACTGGATTGGTAAGAGAAGCCAGAGATTACTTCAGCCAAATGATCAATGTCTTCCAAGTAAAGCCCAATTTTGCACACTATTGGTGCATGGTTAATGCTTTTGCTGGTGTGGGGCTTACACAAGAGGCAGAGGAAATAATTAGGAACGTGCTGGAGGTTGTCGAGGACTTGCCATCGGAATCCTTGGCATGGGCTAGTGTGCTTAGCTCGTGTCGTTTCCAAGGAGATGCCAAATCGGTAGAACAAATTGCAAAGTCTCTTATTGAACAGGAACCTCAGAACATTGCATACTATTGGTTGCTCTTGCATGTCTATGCCATGGCAGGTCAATGGGAGAATGTTACTTGGGTTAAAGAGACCATGAAAGAAAAGAAGTTCAGAAGAATCCCCGGATGCAATCTAGTGGACTTGAATGAAATTGTTCGTGAGCTCAGAGTTGGAAGACATTATCTAGTTGACCTTGTAGAACCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

537

Amino Acids

60.4

Weight (kDa)

6.04

Isoelectric Point (pI)

43.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E_motif	PF20431	460 - 514	8.2e-10	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013087)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51320
malus_domestica	MD15G1241200.v1.1
prunus_persica	Prupe.7G172800_v2.0.a1
pyrus_communis	pycom02g09790 pycom15g21270
rosa_chinensis	RchiOBHm_Chr2g0098771
rosa_laevigata	RLG00000016826 RLG00000037003
rosa_multiflora	Rmu_sc0002776.1_g000032 Rmu_sc0004816.1_g000008
rosa_roxburghii	Rroxscaffold_2G00143720
rosa_rugosa	Rorug02G0074800
rosa_samantha	Rh2AG122400 Rh2BG126100 Rh2CG127000 Rh2DG128100 Rh7DG389800
rosa_wichuraiana	Rw0G004250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	808
Acc36I	ACCTGC	2 cut(s)	493, 1451
AccB1I	GGYRCC	1 cut(s)	367
AccIII	TCCGGA	1 cut(s)	36
AciI	CCGC	5 cut(s)	139, 663, 666, 755, 1135
AclWI	GGATC	1 cut(s)	172
AcsI	RAATTY	2 cut(s)	745, 986
AcuI	CTGAAG	2 cut(s)	999, 1153
AcvI	CACGTG	1 cut(s)	896
AcyI	GRCGYC	2 cut(s)	368, 805
AfaI	GTAC	1 cut(s)	353
AfiI	CCNNNNNNNGG	5 cut(s)	382, 449, 785, 1051, 1326
AflIII	ACRYGT	1 cut(s)	895
AgsI	TTSAA	7 cut(s)	479, 604, 688, 721, 832, 1403, 1549
AhdI	GACNNNNNGTC	1 cut(s)	628
AjnI	CCWGG	2 cut(s)	213, 316
AloI	GAACNNNNNNTCC	2 cut(s)	780, 812
AluBI	AGCT	9 cut(s)	42, 174, 258, 380, 429, 586, 851, 1344, 1567
AluI	AGCT	9 cut(s)	42, 174, 258, 380, 429, 586, 851, 1344, 1567
Alw21I	GWGCWC	2 cut(s)	44, 1569
Alw26I	GTCTC	2 cut(s)	1398, 1487
AlwI	GGATC	1 cut(s)	172
Ama87I	CYCGRG	1 cut(s)	18
Aor13HI	TCCGGA	1 cut(s)	36
AoxI	GGCC	4 cut(s)	217, 237, 373, 1064
ApaI	GGGCCC	1 cut(s)	241
ApeKI	GCWGC	2 cut(s)	532, 890
ApoI	RAATTY	2 cut(s)	745, 986
Asp700I	GAANNNNTTC	3 cut(s)	27, 599, 1557
AspLEI	GCGC	2 cut(s)	370, 818
AspS9I	GGNCC	4 cut(s)	217, 237, 238, 373
AsuC2I	CCSGG	4 cut(s)	241, 372, 592, 1527
AsuHPI	GGTGA	3 cut(s)	202, 284, 754
AsuNHI	GCTAGC	1 cut(s)	659
AvaI	CYCGRG	1 cut(s)	18
BaeGI	GKGCMC	2 cut(s)	241, 1135
BanI	GGYRCC	1 cut(s)	367
BanII	GRGCYC	4 cut(s)	44, 129, 241, 1569
BauI	CACGAG	1 cut(s)	1345
BbrPI	CACGTG	1 cut(s)	896
BbsI	GAAGAC	2 cut(s)	1180, 1585
Bbv12I	GWGCWC	2 cut(s)	44, 1569
BbvI	GCAGC	2 cut(s)	519, 902
BccI	CCATC	4 cut(s)	79, 103, 644, 1318
BcgI	CGANNNNNNTGC	2 cut(s)	638, 672
BciT130I	CCWGG	2 cut(s)	215, 318
BciVI	GTATCC	1 cut(s)	296
BclI	TGATCA	1 cut(s)	1179
BcnI	CCSGG	4 cut(s)	241, 372, 592, 1527
BcoDI	GTCTC	2 cut(s)	1398, 1487
BfaI	CTAG	6 cut(s)	660, 774, 809, 1332, 1538, 1589
BfoI	RGCGCY	1 cut(s)	371
BfuAI	ACCTGC	2 cut(s)	493, 1451
BfuI	GTATCC	1 cut(s)	296
BisI	GCNGC	4 cut(s)	533, 664, 756, 891
BlpI	GCTNAGC	1 cut(s)	1340
BlsI	GCNGC	4 cut(s)	534, 665, 757, 892
Bme1390I	CCNGG	6 cut(s)	215, 241, 318, 372, 592, 1527
BmeRI	GACNNNNNGTC	1 cut(s)	628
BmeT110I	CYCGRG	1 cut(s)	18
BmgT120I	GGNCC	4 cut(s)	217, 237, 238, 373
BmiI	GGNNCC	3 cut(s)	239, 369, 1410
BmrFI	CCNGG	6 cut(s)	215, 241, 318, 372, 592, 1527
BmsI	GCATC	2 cut(s)	1354, 1520
BmtI	GCTAGC	1 cut(s)	663
BpiI	GAAGAC	2 cut(s)	1180, 1585
BpmI	CTGGAG	2 cut(s)	300, 1310
Bpu1102I	GCTNAGC	1 cut(s)	1340
BpuEI	CTTGAG	1 cut(s)	236
BpuMI	CCSGG	4 cut(s)	241, 372, 592, 1527
BsaAI	YACGTR	1 cut(s)	896
BsaBI	GATNNNNATC	1 cut(s)	1074
BsaHI	GRCGYC	2 cut(s)	368, 805
BsaI	GGTCTC	1 cut(s)	1487
BsaJI	CCNNGG	7 cut(s)	213, 214, 738, 1320, 1357, 1455, 1525
BsaWI	WCCGGW	2 cut(s)	36, 761
BsaXI	ACNNNNNCTCC	4 cut(s)	478, 508, 668, 698
Bsc4I	CCNNNNNNNGG	5 cut(s)	382, 449, 785, 1051, 1326
Bse118I	RCCGGY	1 cut(s)	442
Bse1I	ACTGG	1 cut(s)	1144
Bse3DI	GCAATG	2 cut(s)	958, 1419
Bse8I	GATNNNNATC	1 cut(s)	1074
BseAI	TCCGGA	1 cut(s)	36
BseBI	CCWGG	2 cut(s)	215, 318
BseDI	CCNNGG	7 cut(s)	213, 214, 738, 1320, 1357, 1455, 1525
BseGI	GGATG	3 cut(s)	95, 715, 1535
BseJI	GATNNNNATC	1 cut(s)	1074
BseLI	CCNNNNNNNGG	5 cut(s)	382, 449, 785, 1051, 1326
BseMI	GCAATG	2 cut(s)	958, 1419
BseMII	CTCAG	5 cut(s)	369, 395, 606, 1427, 1582
BseNI	ACTGG	1 cut(s)	1144
BseRI	GAGGAG	1 cut(s)	103
BseSI	GKGCMC	2 cut(s)	241, 1135
BseXI	GCAGC	2 cut(s)	519, 902
BsgI	GTGCAG	1 cut(s)	560
Bsh1285I	CGRYCG	2 cut(s)	438, 766
BshFI	GGCC	4 cut(s)	219, 239, 375, 1066
BshNI	GGYRCC	1 cut(s)	367
BsiEI	CGRYCG	2 cut(s)	438, 766
BsiHKAI	GWGCWC	2 cut(s)	44, 1569
BsiHKCI	CYCGRG	1 cut(s)	18
BsiSI	CCGG	8 cut(s)	37, 241, 371, 443, 591, 674, 762, 1527
BslI	CCNNNNNNNGG	5 cut(s)	382, 449, 785, 1051, 1326
BsmAI	GTCTC	2 cut(s)	1398, 1487
BsmI	GAATGC	4 cut(s)	643, 661, 818, 963
BsnI	GGCC	4 cut(s)	219, 239, 375, 1066
Bso31I	GGTCTC	1 cut(s)	1487
BsoBI	CYCGRG	1 cut(s)	18
Bsp120I	GGGCCC	1 cut(s)	237
Bsp1286I	GDGCHC	5 cut(s)	44, 129, 241, 1135, 1569
Bsp13I	TCCGGA	1 cut(s)	36
Bsp143I	GATC	5 cut(s)	177, 435, 767, 791, 1179
Bsp1720I	GCTNAGC	1 cut(s)	1340
Bsp19I	CCATGG	2 cut(s)	738, 1455
BspACI	CCGC	5 cut(s)	139, 663, 666, 755, 1135
BspANI	GGCC	4 cut(s)	219, 239, 375, 1066
BspCNI	CTCAG	5 cut(s)	368, 396, 607, 1426, 1581
BspEI	TCCGGA	1 cut(s)	36
BspLI	GGNNCC	3 cut(s)	239, 369, 1410
BspMI	ACCTGC	2 cut(s)	493, 1451
BspOI	GCTAGC	1 cut(s)	663
BspPI	GGATC	1 cut(s)	172
BspT107I	GGYRCC	1 cut(s)	367
BspTNI	GGTCTC	1 cut(s)	1487
BsrDI	GCAATG	2 cut(s)	958, 1419
BsrFI	RCCGGY	1 cut(s)	442
BsrI	ACTGG	1 cut(s)	1144
BssAI	RCCGGY	1 cut(s)	442
BssECI	CCNNGG	7 cut(s)	213, 214, 738, 1320, 1357, 1455, 1525
BssMI	GATC	5 cut(s)	177, 435, 767, 791, 1179
BssNI	GRCGYC	2 cut(s)	368, 805
BssSI	CACGAG	1 cut(s)	1345
BssT1I	CCWWGG	4 cut(s)	738, 1320, 1357, 1455
Bst2BI	CACGAG	1 cut(s)	1345
Bst2UI	CCWGG	2 cut(s)	215, 318
Bst4CI	ACNGT	2 cut(s)	340, 883
Bst6I	CTCTTC	1 cut(s)	121
BstACI	GRCGYC	2 cut(s)	368, 805
BstBAI	YACGTR	1 cut(s)	896
BstC8I	GCNNGC	4 cut(s)	588, 661, 888, 1135
BstDEI	CTNAG	6 cut(s)	355, 404, 615, 1340, 1413, 1568
BstDSI	CCRYGG	2 cut(s)	738, 1455
BstEII	GGTNACC	1 cut(s)	208
BstF5I	GGATG	3 cut(s)	95, 715, 1535
BstH2I	RGCGCY	1 cut(s)	371
BstHHI	GCGC	2 cut(s)	370, 818
BstKTI	GATC	5 cut(s)	180, 438, 770, 794, 1182
BstMAI	GTCTC	2 cut(s)	1398, 1487
BstMBI	GATC	5 cut(s)	177, 435, 767, 791, 1179
BstMCI	CGRYCG	2 cut(s)	438, 766
BstMWI	GCNNNNNNNGC	2 cut(s)	467, 538
BstNI	CCWGG	2 cut(s)	215, 318
BstNSI	RCATGY	2 cut(s)	539, 1448
BstPI	GGTNACC	1 cut(s)	208
BstSCI	CCNGG	6 cut(s)	213, 239, 316, 370, 590, 1525
BstSLI	GKGCMC	2 cut(s)	241, 1135
BstV1I	GCAGC	2 cut(s)	519, 902
BstV2I	GAAGAC	2 cut(s)	1180, 1585
BsuI	GTATCC	1 cut(s)	296
BsuRI	GGCC	4 cut(s)	219, 239, 375, 1066
BtgI	CCRYGG	2 cut(s)	738, 1455
BtgZI	GCGATG	1 cut(s)	1044
BtsCI	GGATG	3 cut(s)	95, 715, 1535
BtsIMutI	CAGTG	2 cut(s)	363, 1137
BveI	ACCTGC	2 cut(s)	493, 1451
Cac8I	GCNNGC	4 cut(s)	588, 661, 888, 1135
CfoI	GCGC	2 cut(s)	370, 818
Cfr10I	RCCGGY	1 cut(s)	442
Cfr13I	GGNCC	4 cut(s)	217, 237, 238, 373
CseI	GACGC	1 cut(s)	320
Csp6I	GTAC	1 cut(s)	352
CviQI	GTAC	1 cut(s)	352
DdeI	CTNAG	6 cut(s)	355, 404, 615, 1340, 1413, 1568
DinI	GGCGCC	1 cut(s)	369
DpnI	GATC	5 cut(s)	179, 437, 769, 793, 1181
DpnII	GATC	5 cut(s)	177, 435, 767, 791, 1179
DriI	GACNNNNNGTC	1 cut(s)	628
Eam1104I	CTCTTC	1 cut(s)	121
Eam1105I	GACNNNNNGTC	1 cut(s)	628
EarI	CTCTTC	1 cut(s)	121
Ecl136II	GAGCTC	2 cut(s)	42, 1567
Eco130I	CCWWGG	4 cut(s)	738, 1320, 1357, 1455
Eco24I	GRGCYC	4 cut(s)	44, 129, 241, 1569
Eco31I	GGTCTC	1 cut(s)	1487
Eco53kI	GAGCTC	2 cut(s)	42, 1567
Eco57I	CTGAAG	2 cut(s)	999, 1153
Eco72I	CACGTG	1 cut(s)	896
Eco88I	CYCGRG	1 cut(s)	18
Eco91I	GGTNACC	1 cut(s)	208
EcoICRI	GAGCTC	2 cut(s)	42, 1567
EcoO109I	RGGNCCY	1 cut(s)	217
EcoO65I	GGTNACC	1 cut(s)	208
EcoRII	CCWGG	2 cut(s)	213, 316
EcoT14I	CCWWGG	4 cut(s)	738, 1320, 1357, 1455
EcoT38I	GRGCYC	4 cut(s)	44, 129, 241, 1569
EgeI	GGCGCC	1 cut(s)	369
EheI	GGCGCC	1 cut(s)	369
ErhI	CCWWGG	4 cut(s)	738, 1320, 1357, 1455
FauI	CCCGC	2 cut(s)	659, 1142
FauNDI	CATATG	1 cut(s)	558
FbaI	TGATCA	1 cut(s)	1179
Fnu4HI	GCNGC	4 cut(s)	533, 664, 756, 891
FokI	GGATG	3 cut(s)	82, 722, 1542
FriOI	GRGCYC	4 cut(s)	44, 129, 241, 1569
Fsp4HI	GCNGC	4 cut(s)	533, 664, 756, 891
FspBI	CTAG	6 cut(s)	660, 774, 809, 1332, 1538, 1589
GlaI	GCGC	2 cut(s)	369, 817
GluI	GCNGC	4 cut(s)	533, 664, 756, 891
GsuI	CTGGAG	2 cut(s)	300, 1310
HaeII	RGCGCY	1 cut(s)	371
HaeIII	GGCC	4 cut(s)	219, 239, 375, 1066
HapII	CCGG	8 cut(s)	37, 241, 371, 443, 591, 674, 762, 1527
HgaI	GACGC	1 cut(s)	320
HhaI	GCGC	2 cut(s)	370, 818
Hin1I	GRCGYC	2 cut(s)	368, 805
Hin6I	GCGC	2 cut(s)	368, 816
HinP1I	GCGC	2 cut(s)	368, 816
HincII	GTYRAC	2 cut(s)	136, 1594
HindII	GTYRAC	2 cut(s)	136, 1594
HinfI	GANTC	9 cut(s)	33, 161, 227, 479, 524, 553, 925, 1316, 1521
HpaI	GTTAAC	1 cut(s)	136
HpaII	CCGG	8 cut(s)	37, 241, 371, 443, 591, 674, 762, 1527
HphI	GGTGA	3 cut(s)	202, 284, 754
Hpy166II	GTNNAC	5 cut(s)	136, 523, 799, 1543, 1594
Hpy188I	TCNGA	6 cut(s)	171, 302, 1315, 1416, 1517, 1571
Hpy188III	TCNNGA	8 cut(s)	37, 158, 181, 253, 647, 977, 1079, 1562
Hpy8I	GTNNAC	5 cut(s)	136, 523, 799, 1543, 1594
HpyAV	CCTTC	4 cut(s)	613, 715, 1045, 1076
HpyCH4III	ACNGT	2 cut(s)	340, 883
HpyCH4IV	ACGT	3 cut(s)	805, 895, 1284
HpyF10VI	GCNNNNNNNGC	2 cut(s)	467, 538
HpyF3I	CTNAG	6 cut(s)	355, 404, 615, 1340, 1413, 1568
HpySE526I	ACGT	3 cut(s)	805, 895, 1284
Hsp92I	GRCGYC	2 cut(s)	368, 805
HspAI	GCGC	2 cut(s)	368, 816
KasI	GGCGCC	1 cut(s)	367
Kpn2I	TCCGGA	1 cut(s)	36
Ksp22I	TGATCA	1 cut(s)	1179
KspAI	GTTAAC	1 cut(s)	136
Kzo9I	GATC	5 cut(s)	177, 435, 767, 791, 1179
LmnI	GCTCC	3 cut(s)	39, 319, 583
Lsp1109I	GCAGC	2 cut(s)	519, 902
LweI	GCATC	2 cut(s)	1354, 1520
MaeI	CTAG	6 cut(s)	660, 774, 809, 1332, 1538, 1589
MaeII	ACGT	3 cut(s)	805, 895, 1284
MaeIII	GTNAC	4 cut(s)	208, 246, 1102, 1477
MalI	GATC	5 cut(s)	179, 437, 769, 793, 1181
MboI	GATC	5 cut(s)	177, 435, 767, 791, 1179
MboII	GAAGA	8 cut(s)	77, 108, 607, 801, 992, 1180, 1530, 1590
MhlI	GDGCHC	5 cut(s)	44, 129, 241, 1135, 1569
Mly113I	GGCGCC	1 cut(s)	368
MlyI	GAGTC	1 cut(s)	518
MmeI	TCCRAC	2 cut(s)	90, 1555
MroI	TCCGGA	1 cut(s)	36
MroXI	GAANNNNTTC	3 cut(s)	27, 599, 1557
MseI	TTAA	7 cut(s)	135, 333, 345, 843, 990, 1230, 1488
MslI	CAYNNNNRTG	1 cut(s)	1449
MspI	CCGG	8 cut(s)	37, 241, 371, 443, 591, 674, 762, 1527
MspR9I	CCNGG	6 cut(s)	215, 241, 318, 372, 592, 1527
Mva1269I	GAATGC	4 cut(s)	643, 661, 818, 963
MvaI	CCWGG	2 cut(s)	215, 318
MwoI	GCNNNNNNNGC	2 cut(s)	467, 538
NarI	GGCGCC	1 cut(s)	368
NciI	CCSGG	4 cut(s)	241, 372, 592, 1527
NcoI	CCATGG	2 cut(s)	738, 1455
NdeI	CATATG	1 cut(s)	558
NdeII	GATC	5 cut(s)	177, 435, 767, 791, 1179
NheI	GCTAGC	1 cut(s)	659
NlaIV	GGNNCC	3 cut(s)	239, 369, 1410
NmeAIII	GCCGAG	1 cut(s)	401
NmuCI	GTSAC	1 cut(s)	208
NspI	RCATGY	2 cut(s)	539, 1448
PasI	CCCWGGG	1 cut(s)	214
PcsI	WCGNNNNNNNCGW	1 cut(s)	276
PctI	GAATGC	4 cut(s)	643, 661, 818, 963
PdmI	GAANNNNTTC	3 cut(s)	27, 599, 1557
PfeI	GAWTC	8 cut(s)	33, 161, 227, 479, 553, 925, 1316, 1521
PkrI	GCNGC	4 cut(s)	534, 665, 757, 892
Ple19I	CGATCG	1 cut(s)	438
PleI	GAGTC	1 cut(s)	518
PluTI	GGCGCC	1 cut(s)	371
PmaCI	CACGTG	1 cut(s)	896
PmlI	CACGTG	1 cut(s)	896
PpsI	GAGTC	1 cut(s)	518
Ppu21I	YACGTR	1 cut(s)	896
Psp124BI	GAGCTC	2 cut(s)	44, 1569
Psp6I	CCWGG	2 cut(s)	213, 316
PspCI	CACGTG	1 cut(s)	896
PspEI	GGTNACC	1 cut(s)	208
PspGI	CCWGG	2 cut(s)	213, 316
PspN4I	GGNNCC	3 cut(s)	239, 369, 1410
PspOMI	GGGCCC	1 cut(s)	237
PspPI	GGNCC	4 cut(s)	217, 237, 238, 373
PsrI	GAACNNNNNNTAC	2 cut(s)	1409, 1441
PvuI	CGATCG	1 cut(s)	438
RsaI	GTAC	1 cut(s)	353
RsaNI	GTAC	1 cut(s)	352
RseI	CAYNNNNRTG	1 cut(s)	1449
SacI	GAGCTC	2 cut(s)	44, 1569
SaqAI	TTAA	7 cut(s)	135, 333, 345, 843, 990, 1230, 1488
SatI	GCNGC	4 cut(s)	533, 664, 756, 891
Sau3AI	GATC	5 cut(s)	177, 435, 767, 791, 1179
Sau96I	GGNCC	4 cut(s)	217, 237, 238, 373
SchI	GAGTC	1 cut(s)	518
ScrFI	CCNGG	6 cut(s)	215, 241, 318, 372, 592, 1527
SduI	GDGCHC	5 cut(s)	44, 129, 241, 1135, 1569
SfaNI	GCATC	2 cut(s)	1354, 1520
SfoI	GGCGCC	1 cut(s)	369
SmiMI	CAYNNNNRTG	1 cut(s)	1449
SmlI	CTYRAG	1 cut(s)	251
SmoI	CTYRAG	1 cut(s)	251
SsiI	CCGC	5 cut(s)	139, 663, 666, 755, 1135
SspDI	GGCGCC	1 cut(s)	367
SspMI	CTAG	6 cut(s)	660, 774, 809, 1332, 1538, 1589
SstI	GAGCTC	2 cut(s)	44, 1569
StyD4I	CCNGG	6 cut(s)	213, 239, 316, 370, 590, 1525
StyI	CCWWGG	4 cut(s)	738, 1320, 1357, 1455
TaaI	ACNGT	2 cut(s)	340, 883
TaiI	ACGT	3 cut(s)	808, 898, 1287
TaqI	TCGA	9 cut(s)	31, 123, 225, 279, 648, 766, 1025, 1061, 1299
TauI	GCSGC	2 cut(s)	666, 758
TfiI	GAWTC	8 cut(s)	33, 161, 227, 479, 553, 925, 1316, 1521
Tru1I	TTAA	7 cut(s)	135, 333, 345, 843, 990, 1230, 1488
Tru9I	TTAA	7 cut(s)	135, 333, 345, 843, 990, 1230, 1488
TscAI	CASTG	2 cut(s)	363, 1144
TseFI	GTSAC	1 cut(s)	208
TseI	GCWGC	2 cut(s)	532, 890
Tsp45I	GTSAC	1 cut(s)	208
TspDTI	ATGAA	8 cut(s)	545, 621, 956, 999, 1050, 1113, 1514, 1566
TspGWI	ACGGA	1 cut(s)	816
TspRI	CASTG	2 cut(s)	363, 1144
XapI	RAATTY	2 cut(s)	745, 986
XceI	RCATGY	2 cut(s)	539, 1448
XmnI	GAANNNNTTC	3 cut(s)	27, 599, 1557
XspI	CTAG	6 cut(s)	660, 774, 809, 1332, 1538, 1589
ZraI	GACGTC	1 cut(s)	806

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.