Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0009247

Physical Location & Seq

Genomic Coordinates Forward (+)

22863754 .. 22867275

Gene Structure 3522 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1266200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGCCGACCGACGTAGATAATTCCCCTACAGCTTCAGGCGAAGCTAGCGTTTCCTCCTCCGGCAACCAAACCGCTCCGCCCAAACCCGCCACCAAGAAAAAAAGAAACTTGCCAGGAATGCCAGATCCAGATGCAGAAGTGATTGCTCTGTCGCCGAAGACCCTTTTGGCGACGAACCGATTCGTCTGTGAAATTTGCAGCAAAGGGTTTCAGAGGGATCAGAATCTGCAGCTTCATCGGCGCGGCCATAATCTGCCATGGAAGCTGCGGCAGAGGTCGAGCAAAGAGGTGAAGAAGCGAGTCTACGTCTGCCCGGAGGCCTCCTGTGTTCACCACGATCCGTCTAGAGCTTTGGGTGATCTTACTGGGATCAAAAAGCACTTTTGTAGAAAGCACGGGGAGAAGAAGTGGAAATGCGATAAGTGCTCAAAGAAGTATGCGGTTCAGTCGGATTGGAAGGCTCATTCCAAGATTTGTGGCACCCGAGAGTACAAATGTGATTGTGGGACTTTGTTCTCAAGGAGGGACAGCTTCATAACTCACAGGGCTTTTTGCGATGCTTTGGCTGAGGAGAGCGCCAGAGGCCCCACCACCACCAGCGCCACGGCTGCCGCCACCACAGCCGCTGCCACAGCGGTGAATTTGAATTCAGAGTCAGACCCAAGAGCTCAATCTGTTAATTCACCTCCACAACCACTGCCGTCACCGCCTCCGCCGGCCGCAGCTCCACCCCAGCCTACAACTTCATCAGTTCCATCCCAGTCAGCTGGTGTGCTATCTTCATCCCCGCCTACACAAAGTCCAGTGAGAGAGTTGCCAGAAAATCCCACGCAAGTTGTAGAAGCAGTGCCGGCTGTGGCGGGTAGAAAATGGAATTGTAGCAGCAGCAGCAGCAACAGCTCAAGTAGCAATGGCAGTACAAGCAGTGGTGTGTTTGCAAGTTTATTTGCTTCCTCAACAACATCGGCGAGCTTGCAACCTCCTCAACAGCCTGCATTTACTGACTTAATTCGAGCCATGGGGCATCCAGATCAATCAACCAACCTAGCTCCATCTTCTTCAATGGAGCCCATTTCTCTTGGCCTCTCAACCAGCCATGGATCCTCAATTTTCGAGTCTGCAGGGCAGGAGCGTAGGCAATATGCTCCTCCACCACAACCAGCTATGTCTGCGACAGCACTGCTTCAGAAAGCTGCTCAAATGGGCGCAGCAGCAACCAATGCATCATTGCTTCGTGGGTTTGGCATTATGTCATCCTCAACGTCTTCCACGCAACAAGAGAGTATGCAGTGGAATCAAAGGCCGGCAGAACCAGATAATGTCTCAGTTGCTGCAGGGCTTGGACTTGGTCTTCCTTGTGACGGAGGTTCGGGATGGAAGGAACTAATGATGGGAAGTCCTCCAATGTTCGGTCCAAAGCAAACCACACTCGATCTTTTGGGATTGGGAATGGCCGCTGGTAATAACCCCAGTAGTGGCCTATCAGCCCTAATCACATCAATTGGTGGCGGTCTAGATGTAGCTGCTGCAGCTGCATCCTATGGAGGTGGAGAATATAGCGGTAAGGACTTGGCAAGAAGCTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009791 GO:0009889 GO:0009937 GO:0009966 GO:0010029 GO:0010154 GO:0010431 GO:0010468 GO:0010556 GO:0010646 GO:0019219 GO:0019222 GO:0021700 GO:0022414 GO:0023051 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0048316 GO:0048580 GO:0048583 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071695 GO:0080090 GO:0097159 GO:0140110 GO:1900140 GO:1901363 GO:1903506 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C2H2

Protein Analysis

529

Amino Acids

55.08

Weight (kDa)

9.04

Isoelectric Point (pI)

62.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2H2-2nd_BIRD-IDD	PF22996	98 - 132	1.4e-21	BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD	PF22995	136 - 160	2e-14	BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD	PF22992	163 - 202	5.9e-24	BIRD-IDD transcription factor, fourth C2HC zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009247)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50700 AT5G66730
fragaria_vesca	FvH4_1g13710 FvH4_1g13710
malus_domestica	MD02G1151700.v1.1 MD15G1266200.v1.1
prunus_persica	Prupe.7G151500_v2.0.a1
pyrus_communis	pycom02g11890 pycom15g23170
rosa_chinensis	RchiOBHm_Chr2g0102031
rosa_laevigata	RLG00000017128
rosa_multiflora	Rmu_co7992216.1_g000001 Rmu_co8011972.1_g000001 Rmu_sc0020987.1_g000001
rosa_roxburghii	Rroxscaffold_2G00140800
rosa_rugosa	Rorug02G0104200.1 Rorug02G0104300
rosa_samantha	Rh2AG152300 Rh2BG157700 Rh2CG157600 Rh2DG157800
rosa_wichuraiana	Rw2G011890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	479
AccBSI	CCGCTC	1 cut(s)	74
AccI	GTMKAC	1 cut(s)	303
AccII	CGCG	1 cut(s)	243
AclWI	GGATC	6 cut(s)	119, 225, 332, 377, 1095, 1108
AcoI	YGGCCR	3 cut(s)	244, 717, 1452
AcsI	RAATTY	3 cut(s)	192, 640, 646
AcuI	CTGAAG	2 cut(s)	18, 1169
AfaI	GTAC	2 cut(s)	491, 919
AfiI	CCNNNNNNNGG	3 cut(s)	1361, 1409, 1475
AgsI	TTSAA	2 cut(s)	646, 1062
AjnI	CCWGG	1 cut(s)	112
AjuI	GAANNNNNNNTTGG	2 cut(s)	149, 181
AleI	CACNNNNGTG	1 cut(s)	635
Alw21I	GWGCWC	2 cut(s)	428, 670
Alw26I	GTCTC	1 cut(s)	1327
AlwI	GGATC	6 cut(s)	119, 225, 332, 377, 1095, 1108
AlwNI	CAGNNNCTG	3 cut(s)	226, 626, 1331
Ama87I	CYCGRG	1 cut(s)	483
AoxI	GGCC	8 cut(s)	244, 318, 583, 717, 1081, 1301, 1452, 1477
ApoI	RAATTY	3 cut(s)	192, 640, 646
Asp700I	GAANNNNTTC	1 cut(s)	179
AspLEI	GCGC	4 cut(s)	243, 578, 602, 1208
AspS9I	GGNCC	2 cut(s)	584, 1412
AsuC2I	CCSGG	1 cut(s)	314
AsuHPI	GGTGA	6 cut(s)	301, 323, 368, 649, 675, 696
AsuNHI	GCTAGC	1 cut(s)	44
AvaI	CYCGRG	1 cut(s)	483
AvaII	GGWCC	1 cut(s)	1412
BamHI	GGATCC	1 cut(s)	1100
BanI	GGYRCC	1 cut(s)	479
BanII	GRGCYC	2 cut(s)	670, 1071
BarI	GAAGNNNNNNTAC	2 cut(s)	287, 319
BbsI	GAAGAC	3 cut(s)	164, 1257, 1343
Bbv12I	GWGCWC	2 cut(s)	428, 670
BbvCI	CCTCAGC	1 cut(s)	567
BccI	CCATC	4 cut(s)	763, 1060, 1368, 1384
BceAI	ACGGC	2 cut(s)	621, 685
BcgI	CGANNNNNNTGC	4 cut(s)	218, 252, 1162, 1196
BciT130I	CCWGG	1 cut(s)	114
BcnI	CCSGG	1 cut(s)	314
BcoDI	GTCTC	1 cut(s)	1327
BfaI	CTAG	4 cut(s)	45, 345, 1046, 1514
BfmI	CTRYAG	5 cut(s)	27, 227, 1119, 1332, 1527
BfoI	RGCGCY	2 cut(s)	579, 603
Bme1390I	CCNGG	2 cut(s)	114, 314
Bme18I	GGWCC	1 cut(s)	1412
BmeT110I	CYCGRG	1 cut(s)	483
BmgT120I	GGNCC	2 cut(s)	584, 1412
BmiI	GGNNCC	4 cut(s)	481, 586, 1068, 1102
BmrFI	CCNGG	2 cut(s)	114, 314
BmrI	ACTGGG	3 cut(s)	375, 754, 1464
BmsI	GCATC	5 cut(s)	121, 547, 1033, 1232, 1544
BmtI	GCTAGC	1 cut(s)	48
BmuI	ACTGGG	3 cut(s)	375, 754, 1464
BpiI	GAAGAC	3 cut(s)	164, 1257, 1343
Bpu10I	CCTNAGC	1 cut(s)	567
BpuEI	CTTGAG	2 cut(s)	502, 886
BpuMI	CCSGG	1 cut(s)	314
BsaBI	GATNNNNATC	1 cut(s)	222
BsaJI	CCNNGG	4 cut(s)	257, 603, 1017, 1096
BsaXI	ACNNNNNCTCC	2 cut(s)	392, 422
Bsc4I	CCNNNNNNNGG	3 cut(s)	1361, 1409, 1475
Bse118I	RCCGGY	3 cut(s)	715, 850, 1303
Bse1I	ACTGG	4 cut(s)	370, 760, 803, 1470
Bse3DI	GCAATG	2 cut(s)	916, 1226
Bse8I	GATNNNNATC	1 cut(s)	222
BseBI	CCWGG	1 cut(s)	114
BseDI	CCNNGG	4 cut(s)	257, 603, 1017, 1096
BseGI	GGATG	6 cut(s)	755, 782, 1024, 1253, 1379, 1535
BseJI	GATNNNNATC	1 cut(s)	222
BseLI	CCNNNNNNNGG	3 cut(s)	1361, 1409, 1475
BseMI	GCAATG	2 cut(s)	916, 1226
BseMII	CTCAG	2 cut(s)	558, 1338
BseNI	ACTGG	4 cut(s)	370, 760, 803, 1470
BseRI	GAGGAG	4 cut(s)	46, 584, 972, 1137
BseX3I	CGGCCG	1 cut(s)	717
BseYI	CCCAGC	1 cut(s)	732
Bsh1236I	CGCG	1 cut(s)	243
Bsh1285I	CGRYCG	2 cut(s)	9, 720
BshFI	GGCC	8 cut(s)	246, 320, 585, 719, 1083, 1303, 1454, 1479
BshNI	GGYRCC	1 cut(s)	479
BsiEI	CGRYCG	2 cut(s)	9, 720
BsiHKAI	GWGCWC	2 cut(s)	428, 670
BsiHKCI	CYCGRG	1 cut(s)	483
BsiSI	CCGG	5 cut(s)	60, 314, 716, 851, 1304
BslFI	GGGAC	2 cut(s)	520, 539
BslI	CCNNNNNNNGG	3 cut(s)	1361, 1409, 1475
BsmAI	GTCTC	1 cut(s)	1327
BsmFI	GGGAC	2 cut(s)	520, 539
BsmI	GAATGC	1 cut(s)	123
BsnI	GGCC	8 cut(s)	246, 320, 585, 719, 1083, 1303, 1454, 1479
BsoBI	CYCGRG	1 cut(s)	483
Bsp1286I	GDGCHC	3 cut(s)	428, 670, 1071
Bsp143I	GATC	8 cut(s)	124, 217, 337, 358, 369, 1030, 1100, 1432
Bsp19I	CCATGG	3 cut(s)	257, 1017, 1096
BspANI	GGCC	8 cut(s)	246, 320, 585, 719, 1083, 1303, 1454, 1479
BspCNI	CTCAG	2 cut(s)	559, 1337
BspFNI	CGCG	1 cut(s)	243
BspHI	TCATGA	1 cut(s)	1583
BspLI	GGNNCC	4 cut(s)	481, 586, 1068, 1102
BspMAI	CTGCAG	4 cut(s)	231, 1123, 1336, 1531
BspOI	GCTAGC	1 cut(s)	48
BspPI	GGATC	6 cut(s)	119, 225, 332, 377, 1095, 1108
BspT107I	GGYRCC	1 cut(s)	479
BsrBI	CCGCTC	1 cut(s)	74
BsrDI	GCAATG	2 cut(s)	916, 1226
BsrFI	RCCGGY	3 cut(s)	715, 850, 1303
BsrI	ACTGG	4 cut(s)	370, 760, 803, 1470
BssAI	RCCGGY	3 cut(s)	715, 850, 1303
BssECI	CCNNGG	4 cut(s)	257, 603, 1017, 1096
BssMI	GATC	8 cut(s)	124, 217, 337, 358, 369, 1030, 1100, 1432
BssT1I	CCWWGG	3 cut(s)	257, 1017, 1096
Bst2UI	CCWGG	1 cut(s)	114
BstAPI	GCANNNNNTGC	1 cut(s)	1220
BstC8I	GCNNGC	7 cut(s)	46, 717, 852, 970, 974, 993, 1305
BstDEI	CTNAG	2 cut(s)	567, 1324
BstDSI	CCRYGG	4 cut(s)	257, 603, 1017, 1096
BstF5I	GGATG	6 cut(s)	755, 782, 1024, 1253, 1379, 1535
BstFNI	CGCG	1 cut(s)	243
BstH2I	RGCGCY	2 cut(s)	579, 603
BstHHI	GCGC	4 cut(s)	243, 578, 602, 1208
BstKTI	GATC	8 cut(s)	127, 220, 340, 361, 372, 1033, 1103, 1435
BstMAI	GTCTC	1 cut(s)	1327
BstMBI	GATC	8 cut(s)	124, 217, 337, 358, 369, 1030, 1100, 1432
BstMCI	CGRYCG	2 cut(s)	9, 720
BstNI	CCWGG	1 cut(s)	114
BstSCI	CCNGG	2 cut(s)	112, 312
BstSFI	CTRYAG	5 cut(s)	27, 227, 1119, 1332, 1527
BstUI	CGCG	1 cut(s)	243
BstV2I	GAAGAC	3 cut(s)	164, 1257, 1343
BstX2I	RGATCY	2 cut(s)	124, 1100
BstXI	CCANNNNNNTGG	1 cut(s)	767
BstYI	RGATCY	2 cut(s)	124, 1100
BstZI	CGGCCG	1 cut(s)	717
BsuRI	GGCC	8 cut(s)	246, 320, 585, 719, 1083, 1303, 1454, 1479
BtgI	CCRYGG	4 cut(s)	257, 603, 1017, 1096
BtgZI	GCGATG	1 cut(s)	570
BtsCI	GGATG	6 cut(s)	755, 782, 1024, 1253, 1379, 1535
BtsI	GCAGTG	5 cut(s)	695, 852, 931, 1178, 1295
BtsIMutI	CAGTG	6 cut(s)	695, 810, 852, 931, 1178, 1295
Cac8I	GCNNGC	7 cut(s)	46, 717, 852, 970, 974, 993, 1305
CaiI	CAGNNNCTG	3 cut(s)	226, 626, 1331
CciI	TCATGA	1 cut(s)	1583
CfoI	GCGC	4 cut(s)	243, 578, 602, 1208
Cfr10I	RCCGGY	3 cut(s)	715, 850, 1303
Cfr13I	GGNCC	2 cut(s)	584, 1412
Csp6I	GTAC	2 cut(s)	490, 918
CspCI	CAANNNNNGTGG	4 cut(s)	457, 492, 817, 852
CviAII	CATG	4 cut(s)	258, 1018, 1097, 1584
CviQI	GTAC	2 cut(s)	490, 918
DdeI	CTNAG	2 cut(s)	567, 1324
DpnI	GATC	8 cut(s)	126, 219, 339, 360, 371, 1032, 1102, 1434
DpnII	GATC	8 cut(s)	124, 217, 337, 358, 369, 1030, 1100, 1432
EaeI	YGGCCR	3 cut(s)	244, 717, 1452
EagI	CGGCCG	1 cut(s)	717
EciI	GGCGGA	2 cut(s)	66, 702
Ecl136II	GAGCTC	1 cut(s)	668
EclXI	CGGCCG	1 cut(s)	717
Eco130I	CCWWGG	3 cut(s)	257, 1017, 1096
Eco147I	AGGCCT	1 cut(s)	320
Eco24I	GRGCYC	2 cut(s)	670, 1071
Eco47I	GGWCC	1 cut(s)	1412
Eco52I	CGGCCG	1 cut(s)	717
Eco53kI	GAGCTC	1 cut(s)	668
Eco57I	CTGAAG	2 cut(s)	18, 1169
Eco88I	CYCGRG	1 cut(s)	483
EcoICRI	GAGCTC	1 cut(s)	668
EcoO109I	RGGNCCY	1 cut(s)	584
EcoRI	GAATTC	1 cut(s)	646
EcoRII	CCWGG	1 cut(s)	112
EcoT14I	CCWWGG	3 cut(s)	257, 1017, 1096
EcoT22I	ATGCAT	1 cut(s)	1225
EcoT38I	GRGCYC	2 cut(s)	670, 1071
ErhI	CCWWGG	3 cut(s)	257, 1017, 1096
FaeI	CATG	4 cut(s)	261, 1021, 1100, 1587
FaqI	GGGAC	2 cut(s)	520, 539
FatI	CATG	4 cut(s)	257, 1017, 1096, 1583
FauI	CCCGC	3 cut(s)	94, 795, 853
FblI	GTMKAC	1 cut(s)	303
FokI	GGATG	6 cut(s)	742, 769, 1011, 1240, 1386, 1522
FriOI	GRGCYC	2 cut(s)	670, 1071
FspBI	CTAG	4 cut(s)	45, 345, 1046, 1514
GlaI	GCGC	4 cut(s)	242, 577, 601, 1207
GsaI	CCCAGC	1 cut(s)	736
HaeII	RGCGCY	2 cut(s)	579, 603
HaeIII	GGCC	8 cut(s)	246, 320, 585, 719, 1083, 1303, 1454, 1479
HapII	CCGG	5 cut(s)	60, 314, 716, 851, 1304
HhaI	GCGC	4 cut(s)	243, 578, 602, 1208
Hin1II	CATG	4 cut(s)	261, 1021, 1100, 1587
Hin6I	GCGC	4 cut(s)	241, 576, 600, 1206
HinP1I	GCGC	4 cut(s)	241, 576, 600, 1206
HinfI	GANTC	6 cut(s)	180, 223, 300, 653, 1115, 1294
HpaII	CCGG	5 cut(s)	60, 314, 716, 851, 1304
HphI	GGTGA	6 cut(s)	301, 323, 368, 649, 675, 696
Hpy166II	GTNNAC	2 cut(s)	304, 331
Hpy188I	TCNGA	6 cut(s)	213, 222, 451, 652, 658, 1188
Hpy188III	TCNNGA	6 cut(s)	128, 345, 1028, 1371, 1514, 1584
Hpy8I	GTNNAC	2 cut(s)	304, 331
Hpy99I	CGWCG	2 cut(s)	14, 175
HpyAV	CCTTC	2 cut(s)	451, 1372
HpyCH4IV	ACGT	3 cut(s)	12, 306, 1262
HpyF3I	CTNAG	2 cut(s)	567, 1324
HpySE526I	ACGT	3 cut(s)	12, 306, 1262
Hsp92II	CATG	4 cut(s)	261, 1021, 1100, 1587
HspAI	GCGC	4 cut(s)	241, 576, 600, 1206
KroI	GCCGGC	3 cut(s)	715, 850, 1303
KroNI	GCCGGC	3 cut(s)	717, 852, 1305
Kzo9I	GATC	8 cut(s)	124, 217, 337, 358, 369, 1030, 1100, 1432
LmnI	GCTCC	6 cut(s)	79, 730, 1054, 1066, 1129, 1150
LweI	GCATC	5 cut(s)	121, 547, 1033, 1232, 1544
MaeI	CTAG	4 cut(s)	45, 345, 1046, 1514
MaeII	ACGT	3 cut(s)	12, 306, 1262
MaeIII	GTNAC	2 cut(s)	702, 1358
MalI	GATC	8 cut(s)	126, 219, 339, 360, 371, 1032, 1102, 1434
MbiI	CCGCTC	1 cut(s)	74
MboI	GATC	8 cut(s)	124, 217, 337, 358, 369, 1030, 1100, 1432
MboII	GAAGA	8 cut(s)	169, 304, 415, 771, 1047, 1050, 1257, 1343
MfeI	CAATTG	1 cut(s)	1500
MflI	RGATCY	2 cut(s)	124, 1100
MhlI	GDGCHC	3 cut(s)	428, 670, 1071
MluCI	AATT	9 cut(s)	19, 192, 640, 646, 679, 874, 1008, 1107, 1500
MlyI	GAGTC	3 cut(s)	309, 662, 1124
MmeI	TCCRAC	1 cut(s)	429
Mph1103I	ATGCAT	1 cut(s)	1225
MroNI	GCCGGC	3 cut(s)	715, 850, 1303
MroXI	GAANNNNTTC	1 cut(s)	179
MseI	TTAA	2 cut(s)	678, 1007
MslI	CAYNNNNRTG	1 cut(s)	635
MspA1I	CMGCKG	5 cut(s)	626, 635, 767, 1457, 1532
MspI	CCGG	5 cut(s)	60, 314, 716, 851, 1304
MspR9I	CCNGG	2 cut(s)	114, 314
MunI	CAATTG	1 cut(s)	1500
Mva1269I	GAATGC	1 cut(s)	123
MvaI	CCWGG	1 cut(s)	114
MvnI	CGCG	1 cut(s)	243
NaeI	GCCGGC	3 cut(s)	717, 852, 1305
NciI	CCSGG	1 cut(s)	314
NcoI	CCATGG	3 cut(s)	257, 1017, 1096
NdeII	GATC	8 cut(s)	124, 217, 337, 358, 369, 1030, 1100, 1432
NgoMIV	GCCGGC	3 cut(s)	715, 850, 1303
NheI	GCTAGC	1 cut(s)	44
NlaIII	CATG	4 cut(s)	261, 1021, 1100, 1587
NlaIV	GGNNCC	4 cut(s)	481, 586, 1068, 1102
NmuCI	GTSAC	2 cut(s)	702, 1358
NsiI	ATGCAT	1 cut(s)	1225
OliI	CACNNNNGTG	1 cut(s)	635
PagI	TCATGA	1 cut(s)	1583
PceI	AGGCCT	1 cut(s)	320
PctI	GAATGC	1 cut(s)	123
PdiI	GCCGGC	3 cut(s)	717, 852, 1305
PdmI	GAANNNNTTC	1 cut(s)	179
PfeI	GAWTC	3 cut(s)	180, 223, 1294
PflFI	GACNNNGTC	1 cut(s)	1347
PleI	GAGTC	3 cut(s)	308, 661, 1123
PpsI	GAGTC	3 cut(s)	308, 661, 1123
Psp124BI	GAGCTC	1 cut(s)	670
Psp6I	CCWGG	1 cut(s)	112
PspFI	CCCAGC	1 cut(s)	732
PspGI	CCWGG	1 cut(s)	112
PspN4I	GGNNCC	4 cut(s)	481, 586, 1068, 1102
PspPI	GGNCC	2 cut(s)	584, 1412
PstI	CTGCAG	4 cut(s)	231, 1123, 1336, 1531
PstNI	CAGNNNCTG	3 cut(s)	226, 626, 1331
PsuI	RGATCY	2 cut(s)	124, 1100
PsyI	GACNNNGTC	1 cut(s)	1347
PvuII	CAGCTG	2 cut(s)	767, 1532
RsaI	GTAC	2 cut(s)	491, 919
RsaNI	GTAC	2 cut(s)	490, 918
RseI	CAYNNNNRTG	1 cut(s)	635
SacI	GAGCTC	1 cut(s)	670
SaqAI	TTAA	2 cut(s)	678, 1007
Sau3AI	GATC	8 cut(s)	124, 217, 337, 358, 369, 1030, 1100, 1432
Sau96I	GGNCC	2 cut(s)	584, 1412
SchI	GAGTC	3 cut(s)	309, 662, 1124
ScrFI	CCNGG	2 cut(s)	114, 314
SduI	GDGCHC	3 cut(s)	428, 670, 1071
SfaNI	GCATC	5 cut(s)	121, 547, 1033, 1232, 1544
SfcI	CTRYAG	5 cut(s)	27, 227, 1119, 1332, 1527
SinI	GGWCC	1 cut(s)	1412
SmiMI	CAYNNNNRTG	1 cut(s)	635
SmlI	CTYRAG	2 cut(s)	517, 901
SmoI	CTYRAG	2 cut(s)	517, 901
Sse9I	AATT	9 cut(s)	19, 192, 640, 646, 679, 874, 1008, 1107, 1500
SseBI	AGGCCT	1 cut(s)	320
SspMI	CTAG	4 cut(s)	45, 345, 1046, 1514
SstI	GAGCTC	1 cut(s)	670
StuI	AGGCCT	1 cut(s)	320
StyD4I	CCNGG	2 cut(s)	112, 312
StyI	CCWWGG	3 cut(s)	257, 1017, 1096
TaiI	ACGT	3 cut(s)	15, 309, 1265
TaqI	TCGA	4 cut(s)	278, 1012, 1113, 1431
TaqII	GACCGA	2 cut(s)	23, 1400
TasI	AATT	9 cut(s)	19, 192, 640, 646, 679, 874, 1008, 1107, 1500
TatI	WGTACW	2 cut(s)	489, 917
TauI	GCSGC	6 cut(s)	246, 271, 614, 626, 722, 1457
TfiI	GAWTC	3 cut(s)	180, 223, 1294
Tru1I	TTAA	2 cut(s)	678, 1007
Tru9I	TTAA	2 cut(s)	678, 1007
TscAI	CASTG	6 cut(s)	702, 810, 852, 931, 1185, 1295
TseFI	GTSAC	2 cut(s)	702, 1358
Tsp45I	GTSAC	2 cut(s)	702, 1358
TspDTI	ATGAA	4 cut(s)	224, 523, 735, 771
TspGWI	ACGGA	2 cut(s)	330, 1377
TspRI	CASTG	6 cut(s)	702, 810, 852, 931, 1185, 1295
Tth111I	GACNNNGTC	1 cut(s)	1347
VpaK11BI	GGWCC	1 cut(s)	1412
XapI	RAATTY	3 cut(s)	192, 640, 646
XbaI	TCTAGA	2 cut(s)	344, 1513
XmiI	GTMKAC	1 cut(s)	303
XmnI	GAANNNNTTC	1 cut(s)	179
XspI	CTAG	4 cut(s)	45, 345, 1046, 1514
Zsp2I	ATGCAT	1 cut(s)	1225

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.