Prupe.7G151500_v2.0.a1

ZINC FINGER protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
16241543 .. 16245456
3914 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G151500.1

Sequence Viewer

Length: 1554 bp
ATGCCGACCGACCTAGATAATTCCTCTACAGCTTCAGGTGAAGCTAGCGTTTCTTCCTCTGGCAACCAAACTGCTCCTCCCAAACCCACCACCAAGAAAAAACGTAACTTGCCTGGAATGCCAGATCCAGATGCAGAGGTGATTGCTCTGTCTCCCAAGACCCTATTGGCCACAAACCGTTTCGTTTGTGAAATTTGCAACAAAGGGTTTCAGAGGGATCAGAATCTGCAGCTTCATAGGCGTGGTCATAATCTGCCATGGAAGCTGAGGCAGAGGTCGAGTAAAGAGGTGAAGAAGAGAGTCTATGTCTGCCCAGAGCCCTCTTGTGTGCACCATGACCCATCAAGAGCTTTGGGTGATCTCACTGGGATAAAGAAGCACTTTTGCAGAAAGCACGGCGAGAAGAAGTGGAAATGCGATAAGTGTTCCAAGAAATATGCGGTTCAGTCGGATTGGAAAGCCCATTCCAAGATTTGTGGTACCAGAGAGTACAAATGCGATTGTGGGACTTTGTTTTCAAGGAGGGATAGCTTCATAACACATAGGGCCTTCTGTGATGCTTTGGCTGAGGAGAGCGCCAGAGGCCATACCCAAACTCCAACCCAGACTCAAACGGAAGTGAATTTGAATTCAGAATCAGACCCAAAAGATCAAAGTGCTAATTCACCCCCACAGCCAACACCACAGCCACCAGTTCCTTCCCAAGCTACAACTTCATCAGTCCCATCTCAGTCAGCTGGTTTATTATCTTCACCTATGCCTATTACACAAAATCCAGTGACAGAATTGCCTGAAAATCCCACACAAACTATGGAAGAAGCACCAGCTGTGACTGGTCCGAAGGGGAACTGTAGCAGCAGCAACAGCTCAAGCAGCAATGGTAGTACAAGCAGTAGTGTTTTTGCAAGTTTATTTGCTTCCTCAACAGCATCAGCAAGCTTGCAACCTCTTCAACCTCCTGCATTTACCGACTTAATTCGAGCCATGGGGAATCCAGATAGTACAACTGACTTAGCACCATCTTCTTCAGTAGAACCTATCTCTCTTGGCCTCTCAACCAGCCATGGATCCTCACTTTTTGGGCCTGCAGGACAGGAGCGTAGGCAGTATGCGCCTCCACCACAACCAGCTATGTCAGCTACAGCACTGCTTCAGAAAGCTGCTCAAATGGGAGCGGCAGCAACTAATGCATCGTTGCTTCGTGGGTTTGGCATTATGTCTTCCTCATCATCTTCTGCACAACAAGAGAGTTTGCAATGGAGTCAGCGGCAAGCAGAACCAGATAGTGCCTCAGTTGCTGCAGGGCTTGGACTTGCTCTTCCTTGTGATGGAGGTTCAGGATGGAAGGAACTAATGATGGGAAGTCCTTCCATGTTCGGGCCTAAGCAAACCACACTCGATCTTTTGGGATTAGGAATGGCCGCTGGTAATAACCCCAGCGGAGGATTGTCAGCCCTAATTACATCTATCGGTGGAGGCCTCGATGTAGCCGCTGCAGCTGCATCCTTTGGAGGCGGAGAATATAGTGGTAAAGACTTGGCAAGGGGCTCATGA

Protein Analysis

518

Amino Acids

54.16

Weight (kDa)

8.61

Isoelectric Point (pI)

60.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 479
AccB1I GGYRCC 1 cut(s) 479
AccBSI CCGCTC 1 cut(s) 1175
AciI CCGC 7 cut(s) 440, 1175, 1267, 1422, 1440, 1491, 1515
AclWI GGATC 4 cut(s) 119, 225, 1062, 1075
AcoI YGGCCR 2 cut(s) 168, 1419
AcsI RAATTY 3 cut(s) 192, 622, 628
AcuI CTGAAG 3 cut(s) 18, 1011, 1136
AfaI GTAC 4 cut(s) 481, 491, 886, 1003
AfiI CCNNNNNNNGG 3 cut(s) 1328, 1377, 1442
AgsI TTSAA 3 cut(s) 519, 628, 953
AjnI CCWGG 1 cut(s) 112
Alw21I GWGCWC 1 cut(s) 333
Alw26I GTCTC 1 cut(s) 156
Alw44I GTGCAC 1 cut(s) 329
AlwI GGATC 4 cut(s) 119, 225, 1062, 1075
AlwNI CAGNNNCTG 2 cut(s) 226, 1298
AoxI GGCC 8 cut(s) 168, 546, 583, 1048, 1082, 1379, 1419, 1477
ApaLI GTGCAC 1 cut(s) 329
ApoI RAATTY 3 cut(s) 192, 622, 628
Asp700I GAANNNNTTC 1 cut(s) 1366
Asp718I GGTACC 1 cut(s) 479
AspLEI GCGC 2 cut(s) 578, 1114
AspS9I GGNCC 4 cut(s) 546, 836, 1082, 1379
AsuHPI GGTGA 6 cut(s) 50, 151, 301, 368, 657, 744
AsuNHI GCTAGC 1 cut(s) 44
AvaII GGWCC 1 cut(s) 836
BaeGI GKGCMC 1 cut(s) 333
BalI TGGCCA 1 cut(s) 170
BamHI GGATCC 1 cut(s) 1067
BanI GGYRCC 1 cut(s) 479
BanII GRGCYC 2 cut(s) 321, 1550
BbsI GAAGAC 1 cut(s) 1212
Bbv12I GWGCWC 1 cut(s) 333
BbvCI CCTCAGC 2 cut(s) 266, 567
BccI CCATC 6 cut(s) 349, 733, 1027, 1322, 1335, 1351
BceAI ACGGC 1 cut(s) 412
BciT130I CCWGG 1 cut(s) 114
BcoDI GTCTC 1 cut(s) 156
BfaI CTAG 2 cut(s) 14, 45
BfmI CTRYAG 7 cut(s) 27, 227, 850, 1086, 1140, 1299, 1494
BfoI RGCGCY 1 cut(s) 579
Bme1390I CCNGG 1 cut(s) 114
Bme18I GGWCC 1 cut(s) 836
BmgT120I GGNCC 4 cut(s) 546, 836, 1082, 1379
BmiI GGNNCC 2 cut(s) 481, 1069
BmrFI CCNGG 1 cut(s) 114
BmrI ACTGGG 1 cut(s) 375
BmsI GCATC 5 cut(s) 121, 547, 938, 1199, 1511
BmtI GCTAGC 1 cut(s) 48
BmuI ACTGGG 1 cut(s) 375
BpiI GAAGAC 1 cut(s) 1212
Bpu10I CCTNAGC 3 cut(s) 266, 567, 1383
BpuEI CTTGAG 1 cut(s) 853
BsaBI GATNNNNATC 1 cut(s) 222
BsaJI CCNNGG 3 cut(s) 257, 984, 1063
BsaXI ACNNNNNCTCC 4 cut(s) 61, 91, 580, 610
Bsc4I CCNNNNNNNGG 3 cut(s) 1328, 1377, 1442
Bse1I ACTGG 4 cut(s) 370, 692, 776, 838
Bse3DI GCAATG 2 cut(s) 883, 1262
Bse8I GATNNNNATC 1 cut(s) 222
BseBI CCWGG 1 cut(s) 114
BseDI CCNNGG 3 cut(s) 257, 984, 1063
BseGI GGATG 2 cut(s) 1346, 1502
BseJI GATNNNNATC 1 cut(s) 222
BseLI CCNNNNNNNGG 3 cut(s) 1328, 1377, 1442
BseMI GCAATG 2 cut(s) 883, 1262
BseMII CTCAG 4 cut(s) 257, 558, 743, 1305
BseNI ACTGG 4 cut(s) 370, 692, 776, 838
BseRI GAGGAG 2 cut(s) 66, 584
BseSI GKGCMC 1 cut(s) 333
BseYI CCCAGC 1 cut(s) 1436
BsgI GTGCAG 1 cut(s) 1221
Bsh1285I CGRYCG 1 cut(s) 9
BshFI GGCC 8 cut(s) 170, 548, 585, 1050, 1084, 1381, 1421, 1479
BshNI GGYRCC 1 cut(s) 479
BsiEI CGRYCG 1 cut(s) 9
BsiHKAI GWGCWC 1 cut(s) 333
BslFI GGGAC 2 cut(s) 520, 707
BslI CCNNNNNNNGG 3 cut(s) 1328, 1377, 1442
BsmAI GTCTC 1 cut(s) 156
BsmFI GGGAC 2 cut(s) 520, 707
BsmI GAATGC 1 cut(s) 123
BsnI GGCC 8 cut(s) 170, 548, 585, 1050, 1084, 1381, 1421, 1479
Bsp1286I GDGCHC 3 cut(s) 321, 333, 1550
Bsp143I GATC 6 cut(s) 124, 217, 358, 649, 1067, 1399
Bsp19I CCATGG 3 cut(s) 257, 984, 1063
BspACI CCGC 7 cut(s) 440, 1175, 1267, 1422, 1440, 1491, 1515
BspANI GGCC 8 cut(s) 170, 548, 585, 1050, 1084, 1381, 1421, 1479
BspCNI CTCAG 4 cut(s) 258, 559, 742, 1304
BspHI TCATGA 1 cut(s) 1550
BspLI GGNNCC 2 cut(s) 481, 1069
BspMAI CTGCAG 4 cut(s) 231, 1090, 1303, 1498
BspOI GCTAGC 1 cut(s) 48
BspPI GGATC 4 cut(s) 119, 225, 1062, 1075
BspQI GCTCTTC 1 cut(s) 1323
BspT107I GGYRCC 1 cut(s) 479
BsrBI CCGCTC 1 cut(s) 1175
BsrDI GCAATG 2 cut(s) 883, 1262
BsrI ACTGG 4 cut(s) 370, 692, 776, 838
BssECI CCNNGG 3 cut(s) 257, 984, 1063
BssMI GATC 6 cut(s) 124, 217, 358, 649, 1067, 1399
BssT1I CCWWGG 3 cut(s) 257, 984, 1063
Bst2UI CCWGG 1 cut(s) 114
Bst4CI ACNGT 2 cut(s) 179, 851
Bst6I CTCTTC 3 cut(s) 290, 954, 1323
BstAPI GCANNNNNTGC 1 cut(s) 1187
BstC8I GCNNGC 5 cut(s) 46, 937, 941, 1086, 1272
BstDEI CTNAG 6 cut(s) 266, 567, 729, 1012, 1291, 1383
BstDSI CCRYGG 3 cut(s) 257, 984, 1063
BstF5I GGATG 2 cut(s) 1346, 1502
BstH2I RGCGCY 1 cut(s) 579
BstHHI GCGC 2 cut(s) 578, 1114
BstKTI GATC 6 cut(s) 127, 220, 361, 652, 1070, 1402
BstMAI GTCTC 1 cut(s) 156
BstMBI GATC 6 cut(s) 124, 217, 358, 649, 1067, 1399
BstMCI CGRYCG 1 cut(s) 9
BstNI CCWGG 1 cut(s) 114
BstSCI CCNGG 1 cut(s) 112
BstSFI CTRYAG 7 cut(s) 27, 227, 850, 1086, 1140, 1299, 1494
BstSLI GKGCMC 1 cut(s) 333
BstV2I GAAGAC 1 cut(s) 1212
BstX2I RGATCY 2 cut(s) 124, 1067
BstYI RGATCY 2 cut(s) 124, 1067
BsuRI GGCC 8 cut(s) 170, 548, 585, 1050, 1084, 1381, 1421, 1479
BtgI CCRYGG 3 cut(s) 257, 984, 1063
BtsCI GGATG 2 cut(s) 1346, 1502
BtsI GCAGTG 1 cut(s) 1145
BtsIMutI CAGTG 3 cut(s) 363, 783, 1145
Cac8I GCNNGC 5 cut(s) 46, 937, 941, 1086, 1272
CaiI CAGNNNCTG 2 cut(s) 226, 1298
CciI TCATGA 1 cut(s) 1550
CfoI GCGC 2 cut(s) 578, 1114
Cfr13I GGNCC 4 cut(s) 546, 836, 1082, 1379
Csp6I GTAC 4 cut(s) 480, 490, 885, 1002
CspCI CAANNNNNGTGG 2 cut(s) 457, 492
CviAII CATG 6 cut(s) 258, 335, 985, 1064, 1372, 1551
CviQI GTAC 4 cut(s) 480, 490, 885, 1002
DdeI CTNAG 6 cut(s) 266, 567, 729, 1012, 1291, 1383
DpnI GATC 6 cut(s) 126, 219, 360, 651, 1069, 1401
DpnII GATC 6 cut(s) 124, 217, 358, 649, 1067, 1399
EaeI YGGCCR 2 cut(s) 168, 1419
Eam1104I CTCTTC 3 cut(s) 290, 954, 1323
EarI CTCTTC 3 cut(s) 290, 954, 1323
EciI GGCGGA 1 cut(s) 1530
Eco130I CCWWGG 3 cut(s) 257, 984, 1063
Eco147I AGGCCT 1 cut(s) 1479
Eco24I GRGCYC 2 cut(s) 321, 1550
Eco47I GGWCC 1 cut(s) 836
Eco57I CTGAAG 3 cut(s) 18, 1011, 1136
EcoO109I RGGNCCY 1 cut(s) 546
EcoRI GAATTC 1 cut(s) 628
EcoRII CCWGG 1 cut(s) 112
EcoT14I CCWWGG 3 cut(s) 257, 984, 1063
EcoT22I ATGCAT 1 cut(s) 1192
EcoT38I GRGCYC 2 cut(s) 321, 1550
ErhI CCWWGG 3 cut(s) 257, 984, 1063
FaeI CATG 6 cut(s) 261, 338, 988, 1067, 1375, 1554
FalI AAGNNNNNCTT 2 cut(s) 365, 397
FaqI GGGAC 2 cut(s) 520, 707
FatI CATG 6 cut(s) 257, 334, 984, 1063, 1371, 1550
FokI GGATG 2 cut(s) 1353, 1489
FriOI GRGCYC 2 cut(s) 321, 1550
FspBI CTAG 2 cut(s) 14, 45
GlaI GCGC 2 cut(s) 577, 1113
GsaI CCCAGC 1 cut(s) 1440
HaeII RGCGCY 1 cut(s) 579
HaeIII GGCC 8 cut(s) 170, 548, 585, 1050, 1084, 1381, 1421, 1479
HhaI GCGC 2 cut(s) 578, 1114
Hin1II CATG 6 cut(s) 261, 338, 988, 1067, 1375, 1554
Hin6I GCGC 2 cut(s) 576, 1112
HinP1I GCGC 2 cut(s) 576, 1112
HindIII AAGCTT 1 cut(s) 937
HinfI GANTC 6 cut(s) 223, 300, 607, 635, 991, 1261
HphI GGTGA 6 cut(s) 50, 151, 301, 368, 657, 744
Hpy166II GTNNAC 1 cut(s) 331
Hpy188I TCNGA 7 cut(s) 213, 222, 451, 634, 640, 840, 1155
Hpy188III TCNNGA 5 cut(s) 128, 345, 995, 1338, 1551
Hpy8I GTNNAC 1 cut(s) 331
HpyAV CCTTC 5 cut(s) 559, 708, 835, 1339, 1377
HpyCH4III ACNGT 2 cut(s) 179, 851
HpyCH4IV ACGT 1 cut(s) 103
HpyF3I CTNAG 6 cut(s) 266, 567, 729, 1012, 1291, 1383
HpySE526I ACGT 1 cut(s) 103
Hsp92II CATG 6 cut(s) 261, 338, 988, 1067, 1375, 1554
HspAI GCGC 2 cut(s) 576, 1112
KpnI GGTACC 1 cut(s) 483
Kzo9I GATC 6 cut(s) 124, 217, 358, 649, 1067, 1399
LguI GCTCTTC 1 cut(s) 1323
LmnI GCTCC 3 cut(s) 79, 1096, 1172
LweI GCATC 5 cut(s) 121, 547, 938, 1199, 1511
MaeI CTAG 2 cut(s) 14, 45
MaeII ACGT 1 cut(s) 103
MaeIII GTNAC 3 cut(s) 104, 778, 829
MalI GATC 6 cut(s) 126, 219, 360, 651, 1069, 1401
MbiI CCGCTC 1 cut(s) 1175
MboI GATC 6 cut(s) 124, 217, 358, 649, 1067, 1399
MflI RGATCY 2 cut(s) 124, 1067
MhlI GDGCHC 3 cut(s) 321, 333, 1550
MlsI TGGCCA 1 cut(s) 170
MluCI AATT 8 cut(s) 19, 192, 622, 628, 661, 785, 975, 1458
MluNI TGGCCA 1 cut(s) 170
MlyI GAGTC 3 cut(s) 309, 601, 1270
MmeI TCCRAC 2 cut(s) 429, 623
Mox20I TGGCCA 1 cut(s) 170
Mph1103I ATGCAT 1 cut(s) 1192
MroXI GAANNNNTTC 1 cut(s) 1366
MscI TGGCCA 1 cut(s) 170
MseI TTAA 1 cut(s) 974
MslI CAYNNNNRTG 1 cut(s) 240
Msp20I TGGCCA 1 cut(s) 170
MspA1I CMGCKG 7 cut(s) 737, 827, 1267, 1424, 1440, 1493, 1499
MspR9I CCNGG 1 cut(s) 114
Mva1269I GAATGC 1 cut(s) 123
MvaI CCWGG 1 cut(s) 114
NcoI CCATGG 3 cut(s) 257, 984, 1063
NdeII GATC 6 cut(s) 124, 217, 358, 649, 1067, 1399
NheI GCTAGC 1 cut(s) 44
NlaIII CATG 6 cut(s) 261, 338, 988, 1067, 1375, 1554
NlaIV GGNNCC 2 cut(s) 481, 1069
NmuCI GTSAC 2 cut(s) 778, 829
NsiI ATGCAT 1 cut(s) 1192
PagI TCATGA 1 cut(s) 1550
PceI AGGCCT 1 cut(s) 1479
PciSI GCTCTTC 1 cut(s) 1323
PctI GAATGC 1 cut(s) 123
PdmI GAANNNNTTC 1 cut(s) 1366
PfeI GAWTC 3 cut(s) 223, 635, 991
PleI GAGTC 3 cut(s) 308, 601, 1269
PpsI GAGTC 3 cut(s) 308, 601, 1269
Psp6I CCWGG 1 cut(s) 112
PspFI CCCAGC 1 cut(s) 1436
PspGI CCWGG 1 cut(s) 112
PspN4I GGNNCC 2 cut(s) 481, 1069
PspPI GGNCC 4 cut(s) 546, 836, 1082, 1379
PstI CTGCAG 4 cut(s) 231, 1090, 1303, 1498
PstNI CAGNNNCTG 2 cut(s) 226, 1298
PsuI RGATCY 2 cut(s) 124, 1067
PvuII CAGCTG 3 cut(s) 737, 827, 1499
RsaI GTAC 4 cut(s) 481, 491, 886, 1003
RsaNI GTAC 4 cut(s) 480, 490, 885, 1002
RseI CAYNNNNRTG 1 cut(s) 240
SapI GCTCTTC 1 cut(s) 1323
SaqAI TTAA 1 cut(s) 974
Sau3AI GATC 6 cut(s) 124, 217, 358, 649, 1067, 1399
Sau96I GGNCC 4 cut(s) 546, 836, 1082, 1379
SbfI CCTGCAGG 1 cut(s) 1090
SchI GAGTC 3 cut(s) 309, 601, 1270
ScrFI CCNGG 1 cut(s) 114
SdaI CCTGCAGG 1 cut(s) 1090
SduI GDGCHC 3 cut(s) 321, 333, 1550
SfaNI GCATC 5 cut(s) 121, 547, 938, 1199, 1511
SfcI CTRYAG 7 cut(s) 27, 227, 850, 1086, 1140, 1299, 1494
SinI GGWCC 1 cut(s) 836
SmiMI CAYNNNNRTG 1 cut(s) 240
SmlI CTYRAG 1 cut(s) 868
SmoI CTYRAG 1 cut(s) 868
Sse8387I CCTGCAGG 1 cut(s) 1090
Sse9I AATT 8 cut(s) 19, 192, 622, 628, 661, 785, 975, 1458
SseBI AGGCCT 1 cut(s) 1479
SsiI CCGC 7 cut(s) 440, 1175, 1267, 1422, 1440, 1491, 1515
SspMI CTAG 2 cut(s) 14, 45
StuI AGGCCT 1 cut(s) 1479
StyD4I CCNGG 1 cut(s) 112
StyI CCWWGG 3 cut(s) 257, 984, 1063
TaaI ACNGT 2 cut(s) 179, 851
TaiI ACGT 1 cut(s) 106
TaqI TCGA 4 cut(s) 278, 979, 1398, 1482
TaqII GACCGA 1 cut(s) 23
TasI AATT 8 cut(s) 19, 192, 622, 628, 661, 785, 975, 1458
TatI WGTACW 3 cut(s) 489, 884, 1001
TauI GCSGC 4 cut(s) 1178, 1270, 1424, 1493
TfiI GAWTC 3 cut(s) 223, 635, 991
Tru1I TTAA 1 cut(s) 974
Tru9I TTAA 1 cut(s) 974
TscAI CASTG 3 cut(s) 370, 783, 1152
TseFI GTSAC 2 cut(s) 778, 829
Tsp45I GTSAC 2 cut(s) 778, 829
TspDTI ATGAA 3 cut(s) 224, 523, 705
TspGWI ACGGA 1 cut(s) 629
TspRI CASTG 3 cut(s) 370, 783, 1152
VneI GTGCAC 1 cut(s) 329
VpaK11BI GGWCC 1 cut(s) 836
XapI RAATTY 3 cut(s) 192, 622, 628
XcmI CCANNNNNNNNNTGG 2 cut(s) 163, 808
XmnI GAANNNNTTC 1 cut(s) 1366
XspI CTAG 2 cut(s) 14, 45
Zsp2I ATGCAT 1 cut(s) 1192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.