Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0009247

Physical Location & Seq

Genomic Coordinates Forward (+)

13060648 .. 13062838

Gene Structure 2191 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000017128

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

ATGCCGACCGACTTGGATAACTCCTCCACAGCTTCAGGGGAGGCCAGTGTTTCTTCCTCCGGTAACCAAACAGCTCCGGCTCCAAAACCCACCACCAAGAAAAAGCGAAACTTGCCGGGAATGCCAGATCCAGATGCAGAGGTGATTGCTCTGTCTCCCAAGACCCTTATGGCAACGAACCGATTTGTTTGCGAAATTTGCAACAAAGGGTTTCAGAGGGATCAGAATCTGCAGCTCCATCGGCGAGGTCATAATCTGCCGTGGAAGCTGAGGCAGAGATCGAGCAAAGAGATCAAGAAGAGAGTCTATGTCTGCCCTGAAGCTTCTTGTGTCCACCACGATCCTTCTAGAGCTTTGGGCGATCTGACTGGGATTAAGAAGCACTTTTGCAGAAAGCACGGCGAGAAGAAGTGGAAATGCGACAAGTGCTCGAAGAAATACGCTGTTCAGTCGGATTGGAAAGCTCATTCTAAGATATGTGGCACCAGAGAGTATAAATGTGATTGTGGGACTTTGTTTTCAAGGAGGGATAGCTTCATAACACACAGGGCTTTCTGTGATGCTTTGGCTGAGGAAAGTGCTAGAGGTCCTTCTCAGACTCAAAATGTGAATTTGAATTCAGAATCAGAACCGAAGGTTCAAACAGTAAATTCACCTCCACCAGCAGCAGCAGCAGCACAGGCTTCAGTTCCATCCCAACCCACTAGTTCTTCAGCTCCGTCTCAGCCAGCAGCTCTGCCTATTCAGGGTTCAGTTGGAGTGCCAGAGTTGCCCGAAAATCCCCCAGAAGATGCCCCTGCTGTGACTCAGCGGAAGGGACACTGTAGCAGCAGCAACAGCTCAAGCAGCAACGGTAGTACAAGCAGTAGTGTATTTGCAAGTTTATTTGCCTCGTCGACAGCATCTGGAGCAAGCTTGCAACCTCCTCAGCCTCCTGCATTTACCGACTTAATTCGAGCCATGGGGCAACCAGATCAACCAACTGACCTAGCGCCATCTTCTTCAATTGAGCCTATCTCTCTTGGCCTCTCAACCAGTCACGCATCCTCAATTTTCGGATCTGCAGGACAGGAGCGTAGGCAGTATGTGCCTCCACCACAACCAGCTATGTCTGCCACTGCGCTACTTCAGAAAGCTGCTCAAATGGGTGCAGCAGCAACTAATGCATCGTTGCTTCGCGGGTTTGGCATTGTCTCCTCCTCATCTTCTTCCACACAGCAAGATTGCATGCAATGGAATCAGCGGCAAGCAGAATCGGATAGTGCCTCAATTGCTGCAGGGCTTGGACTTGGTCTTCCTTGTGATGGTTCTGGATGGAAGGAATTAATGATGGGAAGTCCTTCAATGTTTGGTCCTAAGCAAACCACACTTGATCTTTTGGGATTGGGAATGGCTGCCGGTAATAACCCCAATGGTGGCCTGTCGGCCCTAATTACATCCATCGGTGGTGGTATAGATGTGGCTGCTGCAGCTGCATCATTTGGAAGTGGAGAATACAGTGGCAAAGATTTGGCGAGGAGCTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009791 GO:0009889 GO:0009937 GO:0009966 GO:0010029 GO:0010154 GO:0010431 GO:0010468 GO:0010556 GO:0010646 GO:0019219 GO:0019222 GO:0021700 GO:0022414 GO:0023051 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0048316 GO:0048580 GO:0048583 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071695 GO:0080090 GO:0097159 GO:0140110 GO:1900140 GO:1901363 GO:1903506 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C2H2

Protein Analysis

509

Amino Acids

53.13

Weight (kDa)

8.85

Isoelectric Point (pI)

59.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2H2-2nd_BIRD-IDD	PF22996	99 - 133	1.3e-21	BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD	PF22995	137 - 161	1.9e-14	BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD	PF22992	164 - 202	1.3e-24	BIRD-IDD transcription factor, fourth C2HC zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009247)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50700 AT5G66730
fragaria_vesca	FvH4_1g13710 FvH4_1g13710
malus_domestica	MD02G1151700.v1.1 MD15G1266200.v1.1
prunus_persica	Prupe.7G151500_v2.0.a1
pyrus_communis	pycom02g11890 pycom15g23170
rosa_chinensis	RchiOBHm_Chr2g0102031
rosa_laevigata	RLG00000017128
rosa_multiflora	Rmu_co7992216.1_g000001 Rmu_co8011972.1_g000001 Rmu_sc0020987.1_g000001
rosa_roxburghii	Rroxscaffold_2G00140800
rosa_rugosa	Rorug02G0104200.1 Rorug02G0104300
rosa_samantha	Rh2AG152300 Rh2BG157700 Rh2CG157600 Rh2DG157800
rosa_wichuraiana	Rw2G011890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	482
AccI	GTMKAC	1 cut(s)	896
AccII	CGCG	1 cut(s)	1179
AciI	CCGC	3 cut(s)	811, 1179, 1243
AclWI	GGATC	4 cut(s)	122, 228, 335, 1066
AcsI	RAATTY	4 cut(s)	195, 610, 616, 649
AcuI	CTGAAG	5 cut(s)	18, 339, 669, 696, 1112
AfaI	GTAC	1 cut(s)	859
AfiI	CCNNNNNNNGG	3 cut(s)	746, 1304, 1415
AgsI	TTSAA	5 cut(s)	522, 616, 641, 1005, 1344
AhlI	ACTAGT	1 cut(s)	704
Alw21I	GWGCWC	2 cut(s)	431, 1523
Alw26I	GTCTC	3 cut(s)	159, 726, 1198
AlwI	GGATC	4 cut(s)	122, 228, 335, 1066
AlwNI	CAGNNNCTG	2 cut(s)	229, 905
AoxI	GGCC	4 cut(s)	42, 1024, 1417, 1425
ApoI	RAATTY	4 cut(s)	195, 610, 616, 649
AseI	ATTAAT	1 cut(s)	1325
Asp700I	GAANNNNTTC	1 cut(s)	1339
AspLEI	GCGC	2 cut(s)	994, 1123
AspS9I	GGNCC	3 cut(s)	587, 1352, 1426
AsuC2I	CCSGG	1 cut(s)	117
AsuHPI	GGTGA	2 cut(s)	154, 645
AvaII	GGWCC	2 cut(s)	587, 1352
BanI	GGYRCC	1 cut(s)	482
BanII	GRGCYC	1 cut(s)	1523
BbsI	GAAGAC	1 cut(s)	1286
Bbv12I	GWGCWC	2 cut(s)	431, 1523
BbvCI	CCTCAGC	3 cut(s)	269, 570, 927
BccI	CCATC	7 cut(s)	246, 700, 1003, 1298, 1308, 1324, 1448
BceAI	ACGGC	2 cut(s)	244, 415
BcgI	CGANNNNNNTGC	4 cut(s)	171, 205, 221, 255
BcnI	CCSGG	1 cut(s)	117
BcoDI	GTCTC	3 cut(s)	159, 726, 1198
BcuI	ACTAGT	1 cut(s)	704
BfaI	CTAG	4 cut(s)	348, 582, 705, 989
BfmI	CTRYAG	5 cut(s)	230, 823, 1062, 1275, 1467
BfoI	RGCGCY	1 cut(s)	995
Bme1390I	CCNGG	1 cut(s)	117
Bme18I	GGWCC	2 cut(s)	587, 1352
BmgT120I	GGNCC	3 cut(s)	587, 1352, 1426
BmiI	GGNNCC	2 cut(s)	81, 484
BmrFI	CCNGG	1 cut(s)	117
BmrI	ACTGGG	1 cut(s)	378
BmsI	GCATC	7 cut(s)	124, 550, 781, 911, 1052, 1175, 1484
BmuI	ACTGGG	1 cut(s)	378
BpiI	GAAGAC	1 cut(s)	1286
BplI	GAGNNNNNCTC	2 cut(s)	1001, 1033
BpmI	CTGGAG	1 cut(s)	927
Bpu10I	CCTNAGC	4 cut(s)	269, 570, 927, 1356
BpuEI	CTTGAG	1 cut(s)	826
BpuMI	CCSGG	1 cut(s)	117
BsaBI	GATNNNNATC	1 cut(s)	225
BsaJI	CCNNGG	2 cut(s)	260, 960
BsaWI	WCCGGW	1 cut(s)	59
Bsc4I	CCNNNNNNNGG	3 cut(s)	746, 1304, 1415
Bse118I	RCCGGY	1 cut(s)	1397
Bse1I	ACTGG	3 cut(s)	45, 373, 1035
Bse3DI	GCAATG	1 cut(s)	1238
Bse8I	GATNNNNATC	1 cut(s)	225
BseDI	CCNNGG	2 cut(s)	260, 960
BseGI	GGATG	4 cut(s)	692, 1043, 1319, 1436
BseJI	GATNNNNATC	1 cut(s)	225
BseLI	CCNNNNNNNGG	3 cut(s)	746, 1304, 1415
BseMI	GCAATG	1 cut(s)	1238
BseMII	CTCAG	6 cut(s)	260, 561, 608, 737, 821, 941
BseNI	ACTGG	3 cut(s)	45, 373, 1035
BseRI	GAGGAG	4 cut(s)	13, 915, 1186, 1189
BsgI	GTGCAG	1 cut(s)	1170
Bsh1236I	CGCG	1 cut(s)	1179
Bsh1285I	CGRYCG	1 cut(s)	9
BshFI	GGCC	4 cut(s)	44, 1026, 1419, 1427
BshNI	GGYRCC	1 cut(s)	482
BsiEI	CGRYCG	1 cut(s)	9
BsiHKAI	GWGCWC	2 cut(s)	431, 1523
BsiSI	CCGG	4 cut(s)	60, 77, 116, 1398
BslFI	GGGAC	2 cut(s)	523, 831
BslI	CCNNNNNNNGG	3 cut(s)	746, 1304, 1415
BsmAI	GTCTC	3 cut(s)	159, 726, 1198
BsmBI	CGTCTC	1 cut(s)	726
BsmFI	GGGAC	2 cut(s)	523, 831
BsmI	GAATGC	1 cut(s)	126
BsnI	GGCC	4 cut(s)	44, 1026, 1419, 1427
Bsp1286I	GDGCHC	2 cut(s)	431, 1523
Bsp143I	GATC	9 cut(s)	127, 220, 278, 291, 340, 361, 973, 1058, 1372
Bsp19I	CCATGG	1 cut(s)	960
BspACI	CCGC	3 cut(s)	811, 1179, 1243
BspANI	GGCC	4 cut(s)	44, 1026, 1419, 1427
BspCNI	CTCAG	6 cut(s)	261, 562, 607, 736, 820, 940
BspFNI	CGCG	1 cut(s)	1179
BspHI	TCATGA	1 cut(s)	1523
BspLI	GGNNCC	2 cut(s)	81, 484
BspMAI	CTGCAG	4 cut(s)	234, 1066, 1279, 1471
BspPI	GGATC	4 cut(s)	122, 228, 335, 1066
BspT107I	GGYRCC	1 cut(s)	482
BsrDI	GCAATG	1 cut(s)	1238
BsrFI	RCCGGY	1 cut(s)	1397
BsrI	ACTGG	3 cut(s)	45, 373, 1035
BssAI	RCCGGY	1 cut(s)	1397
BssECI	CCNNGG	2 cut(s)	260, 960
BssMI	GATC	9 cut(s)	127, 220, 278, 291, 340, 361, 973, 1058, 1372
BssT1I	CCWWGG	1 cut(s)	960
Bst4CI	ACNGT	4 cut(s)	646, 824, 854, 1499
Bst6I	CTCTTC	1 cut(s)	293
BstAPI	GCANNNNNTGC	2 cut(s)	1087, 1163
BstC8I	GCNNGC	5 cut(s)	729, 913, 917, 1229, 1248
BstDEI	CTNAG	8 cut(s)	269, 471, 570, 594, 723, 807, 927, 1356
BstDSI	CCRYGG	2 cut(s)	260, 960
BstEII	GGTNACC	1 cut(s)	62
BstF5I	GGATG	4 cut(s)	692, 1043, 1319, 1436
BstFNI	CGCG	1 cut(s)	1179
BstH2I	RGCGCY	1 cut(s)	995
BstHHI	GCGC	2 cut(s)	994, 1123
BstKTI	GATC	9 cut(s)	130, 223, 281, 294, 343, 364, 976, 1061, 1375
BstMAI	GTCTC	3 cut(s)	159, 726, 1198
BstMBI	GATC	9 cut(s)	127, 220, 278, 291, 340, 361, 973, 1058, 1372
BstMCI	CGRYCG	1 cut(s)	9
BstNSI	RCATGY	1 cut(s)	1231
BstPI	GGTNACC	1 cut(s)	62
BstSCI	CCNGG	1 cut(s)	115
BstSFI	CTRYAG	5 cut(s)	230, 823, 1062, 1275, 1467
BstUI	CGCG	1 cut(s)	1179
BstV2I	GAAGAC	1 cut(s)	1286
BstX2I	RGATCY	2 cut(s)	127, 1058
BstYI	RGATCY	2 cut(s)	127, 1058
BsuRI	GGCC	4 cut(s)	44, 1026, 1419, 1427
BtgI	CCRYGG	2 cut(s)	260, 960
BtsCI	GGATG	4 cut(s)	692, 1043, 1319, 1436
BtsI	GCAGTG	1 cut(s)	1116
BtsIMutI	CAGTG	4 cut(s)	52, 820, 1116, 1504
Cac8I	GCNNGC	5 cut(s)	729, 913, 917, 1229, 1248
CaiI	CAGNNNCTG	2 cut(s)	229, 905
CciI	TCATGA	1 cut(s)	1523
CfoI	GCGC	2 cut(s)	994, 1123
Cfr10I	RCCGGY	1 cut(s)	1397
Cfr13I	GGNCC	3 cut(s)	587, 1352, 1426
Csp6I	GTAC	1 cut(s)	858
CviAII	CATG	3 cut(s)	961, 1228, 1524
CviQI	GTAC	1 cut(s)	858
DdeI	CTNAG	8 cut(s)	269, 471, 570, 594, 723, 807, 927, 1356
DpnI	GATC	9 cut(s)	129, 222, 280, 293, 342, 363, 975, 1060, 1374
DpnII	GATC	9 cut(s)	127, 220, 278, 291, 340, 361, 973, 1058, 1372
Eam1104I	CTCTTC	1 cut(s)	293
EarI	CTCTTC	1 cut(s)	293
Ecl136II	GAGCTC	1 cut(s)	1521
Eco130I	CCWWGG	1 cut(s)	960
Eco24I	GRGCYC	1 cut(s)	1523
Eco47I	GGWCC	2 cut(s)	587, 1352
Eco53kI	GAGCTC	1 cut(s)	1521
Eco57I	CTGAAG	5 cut(s)	18, 339, 669, 696, 1112
Eco91I	GGTNACC	1 cut(s)	62
EcoICRI	GAGCTC	1 cut(s)	1521
EcoO109I	RGGNCCY	1 cut(s)	587
EcoO65I	GGTNACC	1 cut(s)	62
EcoRI	GAATTC	1 cut(s)	616
EcoT14I	CCWWGG	1 cut(s)	960
EcoT22I	ATGCAT	1 cut(s)	1168
EcoT38I	GRGCYC	1 cut(s)	1523
ErhI	CCWWGG	1 cut(s)	960
Esp3I	CGTCTC	1 cut(s)	726
FaeI	CATG	3 cut(s)	964, 1231, 1527
FalI	AAGNNNNNCTT	4 cut(s)	95, 127, 368, 400
FaqI	GGGAC	2 cut(s)	523, 831
FatI	CATG	3 cut(s)	960, 1227, 1523
FauI	CCCGC	1 cut(s)	1172
FblI	GTMKAC	1 cut(s)	896
FokI	GGATG	4 cut(s)	679, 1030, 1326, 1423
FriOI	GRGCYC	1 cut(s)	1523
FspBI	CTAG	4 cut(s)	348, 582, 705, 989
GlaI	GCGC	2 cut(s)	993, 1122
GsuI	CTGGAG	1 cut(s)	927
HaeII	RGCGCY	1 cut(s)	995
HaeIII	GGCC	4 cut(s)	44, 1026, 1419, 1427
HapII	CCGG	4 cut(s)	60, 77, 116, 1398
HhaI	GCGC	2 cut(s)	994, 1123
Hin1II	CATG	3 cut(s)	964, 1231, 1527
Hin6I	GCGC	2 cut(s)	992, 1121
HinP1I	GCGC	2 cut(s)	992, 1121
HincII	GTYRAC	1 cut(s)	897
HindII	GTYRAC	1 cut(s)	897
HindIII	AAGCTT	2 cut(s)	321, 913
HinfI	GANTC	7 cut(s)	226, 303, 598, 623, 805, 1237, 1253
HpaII	CCGG	4 cut(s)	60, 77, 116, 1398
HphI	GGTGA	2 cut(s)	154, 645
Hpy166II	GTNNAC	2 cut(s)	334, 897
Hpy188III	TCNNGA	6 cut(s)	131, 295, 348, 906, 1311, 1524
Hpy8I	GTNNAC	2 cut(s)	334, 897
Hpy99I	CGWCG	1 cut(s)	898
HpyAV	CCTTC	6 cut(s)	354, 600, 628, 808, 1312, 1350
HpyCH4III	ACNGT	4 cut(s)	646, 824, 854, 1499
HpyF3I	CTNAG	8 cut(s)	269, 471, 570, 594, 723, 807, 927, 1356
Hsp92II	CATG	3 cut(s)	964, 1231, 1527
HspAI	GCGC	2 cut(s)	992, 1121
Kzo9I	GATC	9 cut(s)	127, 220, 278, 291, 340, 361, 973, 1058, 1372
LmnI	GCTCC	7 cut(s)	79, 85, 240, 721, 908, 1072, 1518
LweI	GCATC	7 cut(s)	124, 550, 781, 911, 1052, 1175, 1484
MaeI	CTAG	4 cut(s)	348, 582, 705, 989
MaeIII	GTNAC	3 cut(s)	62, 802, 1037
MalI	GATC	9 cut(s)	129, 222, 280, 293, 342, 363, 975, 1060, 1374
MboI	GATC	9 cut(s)	127, 220, 278, 291, 340, 361, 973, 1058, 1372
MfeI	CAATTG	2 cut(s)	1005, 1269
MflI	RGATCY	2 cut(s)	127, 1058
MhlI	GDGCHC	2 cut(s)	431, 1523
MlyI	GAGTC	3 cut(s)	312, 592, 799
MmeI	TCCRAC	2 cut(s)	432, 736
Mph1103I	ATGCAT	1 cut(s)	1168
MroXI	GAANNNNTTC	1 cut(s)	1339
MseI	TTAA	3 cut(s)	375, 950, 1325
MspA1I	CMGCKG	3 cut(s)	811, 1243, 1472
MspI	CCGG	4 cut(s)	60, 77, 116, 1398
MspR9I	CCNGG	1 cut(s)	117
MunI	CAATTG	2 cut(s)	1005, 1269
Mva1269I	GAATGC	1 cut(s)	126
MvnI	CGCG	1 cut(s)	1179
NciI	CCSGG	1 cut(s)	117
NcoI	CCATGG	1 cut(s)	960
NdeII	GATC	9 cut(s)	127, 220, 278, 291, 340, 361, 973, 1058, 1372
NlaIII	CATG	3 cut(s)	964, 1231, 1527
NlaIV	GGNNCC	2 cut(s)	81, 484
NmuCI	GTSAC	2 cut(s)	802, 1037
NsiI	ATGCAT	1 cut(s)	1168
NspI	RCATGY	1 cut(s)	1231
PaeI	GCATGC	1 cut(s)	1231
PagI	TCATGA	1 cut(s)	1523
PctI	GAATGC	1 cut(s)	126
PdmI	GAANNNNTTC	1 cut(s)	1339
PfeI	GAWTC	4 cut(s)	226, 623, 1237, 1253
PflFI	GACNNNGTC	1 cut(s)	1290
PleI	GAGTC	3 cut(s)	311, 592, 799
PpsI	GAGTC	3 cut(s)	311, 592, 799
PpuMI	RGGWCCY	1 cut(s)	587
PshBI	ATTAAT	1 cut(s)	1325
Psp124BI	GAGCTC	1 cut(s)	1523
Psp5II	RGGWCCY	1 cut(s)	587
PspEI	GGTNACC	1 cut(s)	62
PspN4I	GGNNCC	2 cut(s)	81, 484
PspPI	GGNCC	3 cut(s)	587, 1352, 1426
PspPPI	RGGWCCY	1 cut(s)	587
PstI	CTGCAG	4 cut(s)	234, 1066, 1279, 1471
PstNI	CAGNNNCTG	2 cut(s)	229, 905
PsuI	RGATCY	2 cut(s)	127, 1058
PsyI	GACNNNGTC	1 cut(s)	1290
PvuII	CAGCTG	1 cut(s)	1472
RsaI	GTAC	1 cut(s)	859
RsaNI	GTAC	1 cut(s)	858
SacI	GAGCTC	1 cut(s)	1523
SalI	GTCGAC	1 cut(s)	895
SaqAI	TTAA	3 cut(s)	375, 950, 1325
Sau3AI	GATC	9 cut(s)	127, 220, 278, 291, 340, 361, 973, 1058, 1372
Sau96I	GGNCC	3 cut(s)	587, 1352, 1426
SchI	GAGTC	3 cut(s)	312, 592, 799
ScrFI	CCNGG	1 cut(s)	117
SduI	GDGCHC	2 cut(s)	431, 1523
SfaNI	GCATC	7 cut(s)	124, 550, 781, 911, 1052, 1175, 1484
SfcI	CTRYAG	5 cut(s)	230, 823, 1062, 1275, 1467
SinI	GGWCC	2 cut(s)	587, 1352
SmlI	CTYRAG	1 cut(s)	841
SmoI	CTYRAG	1 cut(s)	841
SpeI	ACTAGT	1 cut(s)	704
SphI	GCATGC	1 cut(s)	1231
SsiI	CCGC	3 cut(s)	811, 1179, 1243
SspMI	CTAG	4 cut(s)	348, 582, 705, 989
SstI	GAGCTC	1 cut(s)	1523
StyD4I	CCNGG	1 cut(s)	115
StyI	CCWWGG	1 cut(s)	960
TaaI	ACNGT	4 cut(s)	646, 824, 854, 1499
TaqI	TCGA	4 cut(s)	281, 431, 896, 955
TaqII	GACCGA	1 cut(s)	23
TatI	WGTACW	1 cut(s)	857
TauI	GCSGC	1 cut(s)	1246
TfiI	GAWTC	4 cut(s)	226, 623, 1237, 1253
Tru1I	TTAA	3 cut(s)	375, 950, 1325
Tru9I	TTAA	3 cut(s)	375, 950, 1325
TscAI	CASTG	4 cut(s)	52, 827, 1123, 1504
TseFI	GTSAC	2 cut(s)	802, 1037
Tsp45I	GTSAC	2 cut(s)	802, 1037
TspDTI	ATGAA	1 cut(s)	526
TspGWI	ACGGA	1 cut(s)	708
TspRI	CASTG	4 cut(s)	52, 827, 1123, 1504
Tth111I	GACNNNGTC	1 cut(s)	1290
VpaK11BI	GGWCC	2 cut(s)	587, 1352
VspI	ATTAAT	1 cut(s)	1325
XapI	RAATTY	4 cut(s)	195, 610, 616, 649
XbaI	TCTAGA	1 cut(s)	347
XceI	RCATGY	1 cut(s)	1231
XcmI	CCANNNNNNNNNTGG	1 cut(s)	166
XmiI	GTMKAC	1 cut(s)	896
XmnI	GAANNNNTTC	1 cut(s)	1339
XspI	CTAG	4 cut(s)	348, 582, 705, 989
Zsp2I	ATGCAT	1 cut(s)	1168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.