MD15G1421100.v1.1

Lipolytic acyl hydrolase (LAH)

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
52292637 .. 52297428
4792 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1421100.v1.1.491

Sequence Viewer

Length: 1302 bp
ATGAAGCTACAGCTGCTTTTCAACAGGAAACCAAGGGTAGCCTCTTGTTCTTCTTCCCCACCACTCATGGCTTCCTTATCCTCTCTCCTCCACCCCAACCACCTCCACCTCCCCTTCTCCTCCCCTAACCCTAACCCTAACCCTAATCTCCTCCACCGCTACCCCATTCCTCTCCGCCCCTTATTCCTAACCCACTCCGTCTCCCCTCACTCCAACCCCAACTCCGATACCAACCAAAACTCATCGTCTTCCTCCTCCTCTTCCGCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTACCAAGAAGTCCTTTGCTGTCGCCACGGGGGAGCTCTTTCTGGGCTTGGCTTCTAGGATTATCAAGCGCCGGAATGGAGACCCAGAAGGCAAGGCGGCGGCCTCGTCGGTCGCCATGTTTGAGAGTTCCGGTAAGTACTTTGAAGAGAGAATTGGGAAGGTAATAGAGGATGATATTCAGCCGGAGGTTATTTGGGAGCAGCGCGTCAAGGATGTGGAGGCTGAGAAAGAGCGGCGCGTCGTTACTAGTCCCGGCTTTAGCTTCTCCGCCGCCGGACTTCTTTTTCCTTATCATTTAGGCGCCGCTAAGTTCCTTATTCAGAATGGTTATATCAAGGAAACTACACCATTAGCCGGTTCCTCAGCGGGCGCAATTGTCTGTGCTGTGGTTGCCTCTGGAGCCAGCATGGAAGAGGCTTTACAAGCAACCAAAATACTTGCTGAAGATTGCCGGAACAGAGGGACTGCTTTTCGACTTGGGGCTGTTCTTCGAGAAGTTCTTCAAAGGTTTTTGCCTGACGATGCTCATATCAAGTCTAATGGGAGGGTTCGAGTTGCAGTAACACAGCTTCTATGGAGACCGAGGGGTTTATTGGTGGATCAGTTTGACTCCAAGGAGGATCTCATTGATGCTGTTTTTACTTCTTCCTTTATTCCAGGATATCTTGCTCCAAGACCAGCAACGATGTTCCGGAATCGGCTTTGCATTGATGGGGGCTTGACATTATTCATGCCACCAACGTCTGCAACAGAGACGGTACGAGTTTGTGCTTTCCCAGCCAGTCGATTAGGGTTTTTTGGAGAAATCGGGATCAGTCCGGACTGTAATCCTGATAACAGGGCTACCCCTCGACAGCTTTTCAATTGGGCACTTGAGCCAGCCGAGGATGATGTTCTTGACCGGCTCTTTGAGCTTGGATATAAAGATGCAGCGGTATGGGCTATGGAAAATCCCGTCGACCAAATAGTTAAAGATGACACTTCTTTAGCTGGCGTAGCTCAGTAG

Protein Analysis

434

Amino Acids

47.18

Weight (kDa)

7.09

Isoelectric Point (pI)

42.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Patatin PF01734 186 - 346 1e-18 Patatin-like phospholipase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 596
AccBSI CCGCTC 1 cut(s) 529
AccI GTMKAC 1 cut(s) 1254
AccII CGCG 3 cut(s) 266, 501, 534
AccIII TCCGGA 2 cut(s) 987, 1114
AclWI GGATC 3 cut(s) 903, 924, 1115
AcuI CTGAAG 1 cut(s) 759
AcyI GRCGYC 1 cut(s) 597
AfaI GTAC 2 cut(s) 434, 1056
AfiI CCNNNNNNNGG 1 cut(s) 650
AgsI TTSAA 4 cut(s) 22, 440, 800, 1159
AhlI ACTAGT 1 cut(s) 542
AjnI CCWGG 1 cut(s) 952
AjuI GAANNNNNNNTTGG 2 cut(s) 432, 464
AluBI AGCT 9 cut(s) 7, 13, 331, 558, 865, 1153, 1210, 1286, 1295
AluI AGCT 9 cut(s) 7, 13, 331, 558, 865, 1153, 1210, 1286, 1295
Alw21I GWGCWC 1 cut(s) 333
Alw26I GTCTC 4 cut(s) 205, 369, 868, 1043
AlwI GGATC 3 cut(s) 903, 924, 1115
Aor13HI TCCGGA 2 cut(s) 987, 1114
AoxI GGCC 1 cut(s) 396
ApeKI GCWGC 3 cut(s) 13, 496, 1226
ArsI GACNNNNNNTTYG 2 cut(s) 1187, 1219
Asp700I GAANNNNTTC 1 cut(s) 795
AspLEI GCGC 6 cut(s) 268, 366, 501, 534, 599, 668
AsuC2I CCSGG 1 cut(s) 549
BaeGI GKGCMC 1 cut(s) 1168
BanI GGYRCC 1 cut(s) 596
BanII GRGCYC 1 cut(s) 333
BarI GAAGNNNNNNTAC 4 cut(s) 699, 731, 849, 881
BbsI GAAGAC 1 cut(s) 240
Bbv12I GWGCWC 1 cut(s) 333
BbvCI CCTCAGC 1 cut(s) 658
BbvI GCAGC 2 cut(s) 508, 1238
BccI CCATC 1 cut(s) 1001
BciT130I CCWGG 1 cut(s) 954
BcnI CCSGG 1 cut(s) 549
BcoDI GTCTC 4 cut(s) 205, 369, 868, 1043
BcuI ACTAGT 1 cut(s) 542
BfaI CTAG 2 cut(s) 351, 543
BfmI CTRYAG 1 cut(s) 8
BfoI RGCGCY 2 cut(s) 367, 600
BisI GCNGC 8 cut(s) 14, 393, 396, 497, 530, 567, 600, 1227
BlsI GCNGC 8 cut(s) 15, 394, 397, 498, 531, 568, 601, 1228
BmcAI AGTACT 1 cut(s) 434
Bme1390I CCNGG 2 cut(s) 549, 954
BmiI GGNNCC 3 cut(s) 598, 655, 697
BmrFI CCNGG 2 cut(s) 549, 954
BmsI GCATC 3 cut(s) 808, 916, 1213
BpiI GAAGAC 1 cut(s) 240
BpmI CTGGAG 1 cut(s) 714
Bpu10I CCTNAGC 1 cut(s) 658
BpuEI CTTGAG 1 cut(s) 1190
BpuMI CCSGG 1 cut(s) 549
BsaHI GRCGYC 1 cut(s) 597
BsaI GGTCTC 2 cut(s) 369, 868
BsaJI CCNNGG 5 cut(s) 32, 321, 878, 909, 1179
BsaWI WCCGGW 3 cut(s) 425, 987, 1114
BsaXI ACNNNNNCTCC 4 cut(s) 185, 206, 215, 236
Bsc4I CCNNNNNNNGG 1 cut(s) 650
Bse118I RCCGGY 2 cut(s) 650, 1197
Bse1I ACTGG 1 cut(s) 1077
BseAI TCCGGA 2 cut(s) 987, 1114
BseBI CCWGG 1 cut(s) 954
BseDI CCNNGG 5 cut(s) 32, 321, 878, 909, 1179
BseGI GGATG 3 cut(s) 472, 514, 1189
BseLI CCNNNNNNNGG 1 cut(s) 650
BseMII CTCAG 2 cut(s) 510, 672
BseNI ACTGG 1 cut(s) 1077
BseSI GKGCMC 1 cut(s) 1168
BseXI GCAGC 2 cut(s) 508, 1238
BseYI CCCAGC 1 cut(s) 1072
Bsh1236I CGCG 3 cut(s) 266, 501, 534
Bsh1285I CGRYCG 1 cut(s) 408
BshFI GGCC 1 cut(s) 398
BshNI GGYRCC 1 cut(s) 596
BsiEI CGRYCG 1 cut(s) 408
BsiHKAI GWGCWC 1 cut(s) 333
BslFI GGGAC 2 cut(s) 531, 772
BslI CCNNNNNNNGG 1 cut(s) 650
BsmAI GTCTC 4 cut(s) 205, 369, 868, 1043
BsmBI CGTCTC 2 cut(s) 205, 1043
BsmFI GGGAC 2 cut(s) 531, 772
BsnI GGCC 1 cut(s) 398
Bso31I GGTCTC 2 cut(s) 369, 868
Bsp1286I GDGCHC 2 cut(s) 333, 1168
Bsp13I TCCGGA 2 cut(s) 987, 1114
Bsp143I GATC 3 cut(s) 895, 916, 1107
BspANI GGCC 1 cut(s) 398
BspCNI CTCAG 2 cut(s) 511, 671
BspEI TCCGGA 2 cut(s) 987, 1114
BspFNI CGCG 3 cut(s) 266, 501, 534
BspLI GGNNCC 3 cut(s) 598, 655, 697
BspPI GGATC 3 cut(s) 903, 924, 1115
BspT107I GGYRCC 1 cut(s) 596
BspTNI GGTCTC 2 cut(s) 369, 868
BsrBI CCGCTC 1 cut(s) 529
BsrFI RCCGGY 2 cut(s) 650, 1197
BsrI ACTGG 1 cut(s) 1077
BssAI RCCGGY 2 cut(s) 650, 1197
BssECI CCNNGG 5 cut(s) 32, 321, 878, 909, 1179
BssMI GATC 3 cut(s) 895, 916, 1107
BssNI GRCGYC 1 cut(s) 597
BssT1I CCWWGG 2 cut(s) 32, 909
Bst2UI CCWGG 1 cut(s) 954
Bst4CI ACNGT 2 cut(s) 1054, 1121
Bst6I CTCTTC 3 cut(s) 265, 435, 702
BstACI GRCGYC 1 cut(s) 597
BstC8I GCNNGC 4 cut(s) 664, 700, 1176, 1288
BstDEI CTNAG 4 cut(s) 519, 603, 658, 1296
BstDSI CCRYGG 1 cut(s) 321
BstF5I GGATG 3 cut(s) 472, 514, 1189
BstFNI CGCG 3 cut(s) 266, 501, 534
BstH2I RGCGCY 2 cut(s) 367, 600
BstHHI GCGC 6 cut(s) 268, 366, 501, 534, 599, 668
BstKTI GATC 3 cut(s) 898, 919, 1110
BstMAI GTCTC 4 cut(s) 205, 369, 868, 1043
BstMBI GATC 3 cut(s) 895, 916, 1107
BstMCI CGRYCG 1 cut(s) 408
BstMWI GCNNNNNNNGC 8 cut(s) 13, 686, 695, 719, 1073, 1207, 1235, 1292
BstNI CCWGG 1 cut(s) 954
BstSCI CCNGG 2 cut(s) 547, 952
BstSFI CTRYAG 1 cut(s) 8
BstSLI GKGCMC 1 cut(s) 1168
BstUI CGCG 3 cut(s) 266, 501, 534
BstV1I GCAGC 2 cut(s) 508, 1238
BstV2I GAAGAC 1 cut(s) 240
BstX2I RGATCY 1 cut(s) 916
BstYI RGATCY 1 cut(s) 916
BsuRI GGCC 1 cut(s) 398
BtgI CCRYGG 1 cut(s) 321
BtsCI GGATG 3 cut(s) 472, 514, 1189
Cac8I GCNNGC 4 cut(s) 664, 700, 1176, 1288
CfoI GCGC 6 cut(s) 268, 366, 501, 534, 599, 668
Cfr10I RCCGGY 2 cut(s) 650, 1197
CseI GACGC 2 cut(s) 490, 523
Csp6I GTAC 2 cut(s) 433, 1055
CviAII CATG 4 cut(s) 67, 412, 703, 1027
CviQI GTAC 2 cut(s) 433, 1055
DdeI CTNAG 4 cut(s) 519, 603, 658, 1296
DinI GGCGCC 1 cut(s) 598
DpnI GATC 3 cut(s) 897, 918, 1109
DpnII GATC 3 cut(s) 895, 916, 1107
Eam1104I CTCTTC 3 cut(s) 265, 435, 702
EarI CTCTTC 3 cut(s) 265, 435, 702
EciI GGCGGA 2 cut(s) 164, 553
Ecl136II GAGCTC 1 cut(s) 331
Eco130I CCWWGG 2 cut(s) 32, 909
Eco24I GRGCYC 1 cut(s) 333
Eco31I GGTCTC 2 cut(s) 369, 868
Eco32I GATATC 1 cut(s) 959
Eco53kI GAGCTC 1 cut(s) 331
Eco57I CTGAAG 1 cut(s) 759
EcoICRI GAGCTC 1 cut(s) 331
EcoRII CCWGG 1 cut(s) 952
EcoRV GATATC 1 cut(s) 959
EcoT14I CCWWGG 2 cut(s) 32, 909
EcoT38I GRGCYC 1 cut(s) 333
EgeI GGCGCC 1 cut(s) 598
EheI GGCGCC 1 cut(s) 598
ErhI CCWWGG 2 cut(s) 32, 909
Esp3I CGTCTC 2 cut(s) 205, 1043
FaeI CATG 4 cut(s) 70, 415, 706, 1030
FalI AAGNNNNNCTT 2 cut(s) 293, 325
FaqI GGGAC 2 cut(s) 531, 772
FatI CATG 4 cut(s) 66, 411, 702, 1026
FauI CCCGC 1 cut(s) 655
FblI GTMKAC 1 cut(s) 1254
Fnu4HI GCNGC 8 cut(s) 14, 393, 396, 497, 530, 567, 600, 1227
FokI GGATG 3 cut(s) 479, 521, 1196
FriOI GRGCYC 1 cut(s) 333
Fsp4HI GCNGC 8 cut(s) 14, 393, 396, 497, 530, 567, 600, 1227
FspBI CTAG 2 cut(s) 351, 543
GlaI GCGC 6 cut(s) 267, 365, 500, 533, 598, 667
GluI GCNGC 8 cut(s) 14, 393, 396, 497, 530, 567, 600, 1227
GsaI CCCAGC 1 cut(s) 1076
GsuI CTGGAG 1 cut(s) 714
HaeII RGCGCY 2 cut(s) 367, 600
HaeIII GGCC 1 cut(s) 398
HgaI GACGC 2 cut(s) 490, 523
HhaI GCGC 6 cut(s) 268, 366, 501, 534, 599, 668
Hin1I GRCGYC 1 cut(s) 597
Hin1II CATG 4 cut(s) 70, 415, 706, 1030
Hin6I GCGC 6 cut(s) 266, 364, 499, 532, 597, 666
HinP1I GCGC 6 cut(s) 266, 364, 499, 532, 597, 666
HincII GTYRAC 1 cut(s) 1255
HindII GTYRAC 1 cut(s) 1255
HinfI GANTC 2 cut(s) 905, 991
Hpy166II GTNNAC 1 cut(s) 1255
Hpy188I TCNGA 2 cut(s) 226, 618
Hpy188III TCNNGA 7 cut(s) 693, 788, 988, 1105, 1115, 1127, 1193
Hpy8I GTNNAC 1 cut(s) 1255
Hpy99I CGWCG 3 cut(s) 406, 539, 1256
HpyAV CCTTC 3 cut(s) 124, 377, 448
HpyCH4III ACNGT 2 cut(s) 1054, 1121
HpyCH4IV ACGT 1 cut(s) 1037
HpyCH4V TGCA 4 cut(s) 854, 1002, 1043, 1226
HpyF10VI GCNNNNNNNGC 8 cut(s) 13, 686, 695, 719, 1073, 1207, 1235, 1292
HpyF3I CTNAG 4 cut(s) 519, 603, 658, 1296
HpySE526I ACGT 1 cut(s) 1037
Hsp92I GRCGYC 1 cut(s) 597
Hsp92II CATG 4 cut(s) 70, 415, 706, 1030
HspAI GCGC 6 cut(s) 266, 364, 499, 532, 597, 666
KasI GGCGCC 1 cut(s) 596
Kpn2I TCCGGA 2 cut(s) 987, 1114
Kzo9I GATC 3 cut(s) 895, 916, 1107
LmnI GCTCC 4 cut(s) 328, 493, 695, 970
Lsp1109I GCAGC 2 cut(s) 508, 1238
LweI GCATC 3 cut(s) 808, 916, 1213
MaeI CTAG 2 cut(s) 351, 543
MaeII ACGT 1 cut(s) 1037
MaeIII GTNAC 2 cut(s) 538, 856
MalI GATC 3 cut(s) 897, 918, 1109
MbiI CCGCTC 1 cut(s) 529
MboI GATC 3 cut(s) 895, 916, 1107
MfeI CAATTG 2 cut(s) 669, 1159
MflI RGATCY 1 cut(s) 916
MhlI GDGCHC 2 cut(s) 333, 1168
MluCI AATT 3 cut(s) 447, 669, 1159
Mly113I GGCGCC 1 cut(s) 597
MlyI GAGTC 1 cut(s) 899
MmeI TCCRAC 1 cut(s) 237
MroI TCCGGA 2 cut(s) 987, 1114
MroXI GAANNNNTTC 1 cut(s) 795
MseI TTAA 1 cut(s) 1266
MspA1I CMGCKG 3 cut(s) 13, 662, 1229
MspR9I CCNGG 2 cut(s) 549, 954
MunI CAATTG 2 cut(s) 669, 1159
MvaI CCWGG 1 cut(s) 954
MvnI CGCG 3 cut(s) 266, 501, 534
MwoI GCNNNNNNNGC 8 cut(s) 13, 686, 695, 719, 1073, 1207, 1235, 1292
NarI GGCGCC 1 cut(s) 597
NciI CCSGG 1 cut(s) 549
NdeII GATC 3 cut(s) 895, 916, 1107
NlaIII CATG 4 cut(s) 70, 415, 706, 1030
NlaIV GGNNCC 3 cut(s) 598, 655, 697
NmeAIII GCCGAG 1 cut(s) 1204
PdmI GAANNNNTTC 1 cut(s) 795
PfeI GAWTC 1 cut(s) 991
PfoI TCCNGGA 1 cut(s) 952
PkrI GCNGC 8 cut(s) 15, 394, 397, 498, 531, 568, 601, 1228
PleI GAGTC 1 cut(s) 899
PluTI GGCGCC 1 cut(s) 600
PpsI GAGTC 1 cut(s) 899
Psp124BI GAGCTC 1 cut(s) 333
Psp6I CCWGG 1 cut(s) 952
PspFI CCCAGC 1 cut(s) 1072
PspGI CCWGG 1 cut(s) 952
PspN4I GGNNCC 3 cut(s) 598, 655, 697
PsuI RGATCY 1 cut(s) 916
PvuII CAGCTG 1 cut(s) 13
RsaI GTAC 2 cut(s) 434, 1056
RsaNI GTAC 2 cut(s) 433, 1055
SacI GAGCTC 1 cut(s) 333
SalI GTCGAC 1 cut(s) 1253
SaqAI TTAA 1 cut(s) 1266
SatI GCNGC 8 cut(s) 14, 393, 396, 497, 530, 567, 600, 1227
Sau3AI GATC 3 cut(s) 895, 916, 1107
ScaI AGTACT 1 cut(s) 434
SchI GAGTC 1 cut(s) 899
ScrFI CCNGG 2 cut(s) 549, 954
SduI GDGCHC 2 cut(s) 333, 1168
SfaNI GCATC 3 cut(s) 808, 916, 1213
SfcI CTRYAG 1 cut(s) 8
SfoI GGCGCC 1 cut(s) 598
SmlI CTYRAG 1 cut(s) 1169
SmoI CTYRAG 1 cut(s) 1169
SpeI ACTAGT 1 cut(s) 542
Sse9I AATT 3 cut(s) 447, 669, 1159
SspDI GGCGCC 1 cut(s) 596
SspMI CTAG 2 cut(s) 351, 543
SstI GAGCTC 1 cut(s) 333
StyD4I CCNGG 2 cut(s) 547, 952
StyI CCWWGG 2 cut(s) 32, 909
TaaI ACNGT 2 cut(s) 1054, 1121
TaiI ACGT 1 cut(s) 1040
TaqI TCGA 6 cut(s) 769, 787, 847, 1081, 1147, 1254
TaqII GACCGA 2 cut(s) 394, 892
TasI AATT 3 cut(s) 447, 669, 1159
TatI WGTACW 1 cut(s) 432
TauI GCSGC 5 cut(s) 395, 398, 532, 569, 602
TfiI GAWTC 1 cut(s) 991
Tru1I TTAA 1 cut(s) 1266
Tru9I TTAA 1 cut(s) 1266
TseI GCWGC 3 cut(s) 13, 496, 1226
TspDTI ATGAA 2 cut(s) 17, 1015
TspGWI ACGGA 1 cut(s) 187
XmiI GTMKAC 1 cut(s) 1254
XmnI GAANNNNTTC 1 cut(s) 795
XspI CTAG 2 cut(s) 351, 543
ZrmI AGTACT 1 cut(s) 434
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.