RchiOBHm_Chr7g0223001

Lipolytic acyl hydrolase (LAH)

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
44627525 .. 44632437
4913 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19965

Sequence Viewer

Length: 1278 bp
ATGTTTCGGAGGAAACTAACTGGAGCCTCTTCTTCATCCTCCTCACCACTCATGGCTCCCTACTCCTCTCTCCTCCTCCGTCCTCAACCTCACCCCTTCTCTCTCTCCACCATCAAACCTAACCCTAACCCTAACCCTAATCTCATCAACCGCTACACCTTACTCCCTCTCCGCACCGTAAACTTAAAGTCCTCTCTCCCGCGCTCTTCATCTGACCCCGACACCAATCGCACGGCGGCGTCGTCGGCTTCACCTCCACCTCCACCGCCTCCGACGACAAAGAAGTCGTTTGCTGTTGCGACGGGGGAGTTGTTCTTGGGCCTGGCGACTAGGATCATCAAGCGGCGCAATGGAGGCCCGGACCGTGACGCGGCGGCATCCGTCGCCATGTTTGAGAGCTCCGGCAAGTTCTCCGATGAGAGAATTGGGAAGGTGATTGAGGATGAGCTTCAGCCGGAGGTCGTTTGGGAGCAGCGCGTGAAGGATGTGGAGGCTGAGAAAGAGAGGCGCGTGATTACAAGTCCCGGCTTTAGTTTCTCCGCTGCGGGACTTCTTTTCCCTTACCATCTAGGTGCTGCTCAGTTCTTGATTGAGAATGGCTATATCAAGGAAACCACTCCATTAGCTGGTTCCTCTGCAGGTGCCATTGTGTGTGCTGTGATTGCCTCTGGAGCAAGTATGGCAGAGGCCTTACAAGCTACTAAAATTCTGGCTGAAGATTGCCGGAACAGAGGGACAGCTTTTCGACTTGGGGCTGTTCTTCGAGATGTTCTCCAAAAGTTTTTGCCTGAGGATGCTCATATTAAGTCTAATGGGAGGGTTAGAGTTGCTGTAACACAGCTCCTATGGAGACCAAGAGGTTTACTGGTGGATCAGTTTGACTCCAAGGAAGATCTCATTAATGCGGTTTTCACTTCTTCCTTTATTCCAGGGTATCTCGCACCAAGACCAGCAACGATGTTCCGGAATCGTCTTTGTATTGATGGGGGCTTGACTTTATTTATGCCACCAACATCTGCAGCAAAGACGGTTCGTGTTTGTGCTTTCCCAGCTAGTCGATTGGGTTTACAAGGAATTGGGATCAGTCCGGACTGTAATCCGGATGATAGGGCAACCCCTCGAGAGCTTTTCAATTGGGCACTTGAGCCAGCAGAAGATGATATTCTTGACCGGCTTTTTGCGCTTGGATATAAAGATGCAGCTGTATGGGCCGAGTCCAACCCAGTTGGCCAAATAGTTGAAGATGATAGTTCCTTGATCGGTAGTGGCTTAGCTTAG

Protein Analysis

425

Amino Acids

45.89

Weight (kDa)

8.75

Isoelectric Point (pI)

44.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Patatin PF01734 178 - 339 1.1e-17 Patatin-like phospholipase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 629
AasI GACNNNNNNGTC 1 cut(s) 283
Acc36I ACCTGC 1 cut(s) 629
AccB1I GGYRCC 1 cut(s) 641
AccB7I CCANNNNNTGG 1 cut(s) 626
AccII CGCG 4 cut(s) 202, 371, 477, 510
AccIII TCCGGA 3 cut(s) 963, 1087, 1099
AclWI GGATC 3 cut(s) 341, 879, 1088
AcoI YGGCCR 1 cut(s) 1228
AcsI RAATTY 1 cut(s) 705
AcuI CTGAAG 2 cut(s) 434, 735
AcyI GRCGYC 1 cut(s) 239
AfiI CCNNNNNNNGG 2 cut(s) 370, 626
AgsI TTSAA 2 cut(s) 1132, 1241
AjnI CCWGG 2 cut(s) 321, 928
Alw21I GWGCWC 1 cut(s) 401
Alw26I GTCTC 1 cut(s) 844
AlwI GGATC 3 cut(s) 341, 879, 1088
Ama87I CYCGRG 1 cut(s) 1119
Aor13HI TCCGGA 3 cut(s) 963, 1087, 1099
AoxI GGCC 5 cut(s) 319, 355, 687, 1209, 1228
ApeKI GCWGC 5 cut(s) 472, 542, 575, 1019, 1199
ApoI RAATTY 1 cut(s) 705
ArsI GACNNNNNNTTYG 2 cut(s) 1160, 1192
AseI ATTAAT 1 cut(s) 900
AspLEI GCGC 5 cut(s) 204, 348, 477, 510, 1183
AspS9I GGNCC 4 cut(s) 319, 356, 361, 1209
AsuC2I CCSGG 2 cut(s) 359, 525
AsuHPI GGTGA 4 cut(s) 36, 83, 243, 445
AvaI CYCGRG 1 cut(s) 1119
AvaII GGWCC 1 cut(s) 361
AxyI CCTNAGG 1 cut(s) 789
BaeGI GKGCMC 1 cut(s) 1141
BalI TGGCCA 1 cut(s) 1230
BanI GGYRCC 1 cut(s) 641
BanII GRGCYC 1 cut(s) 401
Bbv12I GWGCWC 1 cut(s) 401
BbvI GCAGC 5 cut(s) 484, 529, 562, 1031, 1211
BccI CCATC 3 cut(s) 119, 573, 977
BceAI ACGGC 1 cut(s) 249
BciT130I CCWGG 2 cut(s) 323, 930
BcnI CCSGG 2 cut(s) 359, 525
BcoDI GTCTC 1 cut(s) 844
BfaI CTAG 3 cut(s) 330, 569, 1053
BfmI CTRYAG 2 cut(s) 636, 1017
BfuAI ACCTGC 1 cut(s) 629
BglII AGATCT 1 cut(s) 892
BisI GCNGC 9 cut(s) 237, 344, 372, 375, 473, 543, 576, 1020, 1200
BlpI GCTNAGC 1 cut(s) 1270
BlsI GCNGC 9 cut(s) 238, 345, 373, 376, 474, 544, 577, 1021, 1201
Bme1390I CCNGG 4 cut(s) 323, 359, 525, 930
Bme18I GGWCC 1 cut(s) 361
BmeT110I CYCGRG 1 cut(s) 1119
BmgT120I GGNCC 4 cut(s) 319, 356, 361, 1209
BmiI GGNNCC 4 cut(s) 25, 57, 631, 643
BmrFI CCNGG 4 cut(s) 323, 359, 525, 930
BmrI ACTGGG 1 cut(s) 1217
BmsI GCATC 3 cut(s) 386, 784, 1186
BmuI ACTGGG 1 cut(s) 1217
BplI GAGNNNNNCTC 2 cut(s) 756, 788
BpmI CTGGAG 2 cut(s) 42, 690
Bpu1102I GCTNAGC 1 cut(s) 1270
BpuEI CTTGAG 1 cut(s) 1163
BpuMI CCSGG 2 cut(s) 359, 525
BsaHI GRCGYC 1 cut(s) 239
BsaI GGTCTC 1 cut(s) 844
BsaJI CCNNGG 2 cut(s) 885, 929
BsaWI WCCGGW 3 cut(s) 963, 1087, 1099
BsaXI ACNNNNNCTCC 2 cut(s) 153, 183
Bsc4I CCNNNNNNNGG 2 cut(s) 370, 626
Bse118I RCCGGY 1 cut(s) 1170
Bse1I ACTGG 3 cut(s) 25, 870, 1223
Bse21I CCTNAGG 1 cut(s) 789
Bse3DI GCAATG 1 cut(s) 355
BseAI TCCGGA 3 cut(s) 963, 1087, 1099
BseBI CCWGG 2 cut(s) 323, 930
BseDI CCNNGG 2 cut(s) 885, 929
BseGI GGATG 6 cut(s) 35, 377, 448, 490, 799, 1108
BseLI CCNNNNNNNGG 2 cut(s) 370, 626
BseMI GCAATG 1 cut(s) 355
BseMII CTCAG 3 cut(s) 486, 593, 780
BseNI ACTGG 3 cut(s) 25, 870, 1223
BseRI GAGGAG 4 cut(s) 31, 55, 62, 65
BseSI GKGCMC 1 cut(s) 1141
BseXI GCAGC 5 cut(s) 484, 529, 562, 1031, 1211
BseYI CCCAGC 1 cut(s) 1048
Bsh1236I CGCG 4 cut(s) 202, 371, 477, 510
BshFI GGCC 5 cut(s) 321, 357, 689, 1211, 1230
BshNI GGYRCC 1 cut(s) 641
BsiHKAI GWGCWC 1 cut(s) 401
BsiHKCI CYCGRG 1 cut(s) 1119
BsiSI CCGG 9 cut(s) 359, 402, 455, 525, 724, 964, 1088, 1100, 1171
BslFI GGGAC 3 cut(s) 507, 561, 748
BslI CCNNNNNNNGG 2 cut(s) 370, 626
BsmAI GTCTC 1 cut(s) 844
BsmFI GGGAC 3 cut(s) 507, 561, 748
BsnI GGCC 5 cut(s) 321, 357, 689, 1211, 1230
Bso31I GGTCTC 1 cut(s) 844
BsoBI CYCGRG 1 cut(s) 1119
Bsp1286I GDGCHC 2 cut(s) 401, 1141
Bsp13I TCCGGA 3 cut(s) 963, 1087, 1099
Bsp143I GATC 5 cut(s) 333, 871, 892, 1080, 1257
Bsp1720I GCTNAGC 1 cut(s) 1270
BspANI GGCC 5 cut(s) 321, 357, 689, 1211, 1230
BspCNI CTCAG 3 cut(s) 487, 592, 781
BspEI TCCGGA 3 cut(s) 963, 1087, 1099
BspFNI CGCG 4 cut(s) 202, 371, 477, 510
BspLI GGNNCC 4 cut(s) 25, 57, 631, 643
BspMAI CTGCAG 2 cut(s) 640, 1021
BspMI ACCTGC 1 cut(s) 629
BspPI GGATC 3 cut(s) 341, 879, 1088
BspQI GCTCTTC 1 cut(s) 211
BspT107I GGYRCC 1 cut(s) 641
BspTNI GGTCTC 1 cut(s) 844
BsrDI GCAATG 1 cut(s) 355
BsrFI RCCGGY 1 cut(s) 1170
BsrI ACTGG 3 cut(s) 25, 870, 1223
BssAI RCCGGY 1 cut(s) 1170
BssECI CCNNGG 2 cut(s) 885, 929
BssMI GATC 5 cut(s) 333, 871, 892, 1080, 1257
BssNI GRCGYC 1 cut(s) 239
BssT1I CCWWGG 1 cut(s) 885
Bst2UI CCWGG 2 cut(s) 323, 930
Bst4CI ACNGT 4 cut(s) 178, 365, 1030, 1094
Bst6I CTCTTC 2 cut(s) 34, 211
BstACI GRCGYC 1 cut(s) 239
BstC8I GCNNGC 1 cut(s) 1149
BstDEI CTNAG 5 cut(s) 495, 579, 789, 1270, 1275
BstF5I GGATG 6 cut(s) 35, 377, 448, 490, 799, 1108
BstFNI CGCG 4 cut(s) 202, 371, 477, 510
BstHHI GCGC 5 cut(s) 204, 348, 477, 510, 1183
BstKTI GATC 5 cut(s) 336, 874, 895, 1083, 1260
BstMAI GTCTC 1 cut(s) 844
BstMBI GATC 5 cut(s) 333, 871, 892, 1080, 1257
BstNI CCWGG 2 cut(s) 323, 930
BstSCI CCNGG 4 cut(s) 321, 357, 523, 928
BstSFI CTRYAG 2 cut(s) 636, 1017
BstSLI GKGCMC 1 cut(s) 1141
BstUI CGCG 4 cut(s) 202, 371, 477, 510
BstV1I GCAGC 5 cut(s) 484, 529, 562, 1031, 1211
BstX2I RGATCY 1 cut(s) 892
BstYI RGATCY 1 cut(s) 892
Bsu36I CCTNAGG 1 cut(s) 789
BsuRI GGCC 5 cut(s) 321, 357, 689, 1211, 1230
BtsCI GGATG 6 cut(s) 35, 377, 448, 490, 799, 1108
BveI ACCTGC 1 cut(s) 629
Cac8I GCNNGC 1 cut(s) 1149
CfoI GCGC 5 cut(s) 204, 348, 477, 510, 1183
Cfr10I RCCGGY 1 cut(s) 1170
Cfr13I GGNCC 4 cut(s) 319, 356, 361, 1209
CpoI CGGWCCG 1 cut(s) 361
CseI GACGC 2 cut(s) 228, 377
CspI CGGWCCG 1 cut(s) 361
CviAII CATG 2 cut(s) 52, 388
DdeI CTNAG 5 cut(s) 495, 579, 789, 1270, 1275
DpnI GATC 5 cut(s) 335, 873, 894, 1082, 1259
DpnII GATC 5 cut(s) 333, 871, 892, 1080, 1257
DrdI GACNNNNNNGTC 1 cut(s) 283
DseDI GACNNNNNNGTC 1 cut(s) 283
EaeI YGGCCR 1 cut(s) 1228
Eam1104I CTCTTC 2 cut(s) 34, 211
EarI CTCTTC 2 cut(s) 34, 211
Ecl136II GAGCTC 1 cut(s) 399
Eco130I CCWWGG 1 cut(s) 885
Eco147I AGGCCT 1 cut(s) 689
Eco24I GRGCYC 1 cut(s) 401
Eco31I GGTCTC 1 cut(s) 844
Eco47I GGWCC 1 cut(s) 361
Eco53kI GAGCTC 1 cut(s) 399
Eco57I CTGAAG 2 cut(s) 434, 735
Eco81I CCTNAGG 1 cut(s) 789
Eco88I CYCGRG 1 cut(s) 1119
EcoICRI GAGCTC 1 cut(s) 399
EcoRII CCWGG 2 cut(s) 321, 928
EcoT14I CCWWGG 1 cut(s) 885
EcoT38I GRGCYC 1 cut(s) 401
ErhI CCWWGG 1 cut(s) 885
FaeI CATG 2 cut(s) 55, 391
FaiI YATR 9 cut(s) 53, 389, 603, 680, 801, 847, 1004, 1191, 1207
FaqI GGGAC 3 cut(s) 507, 561, 748
FatI CATG 2 cut(s) 51, 387
FauI CCCGC 2 cut(s) 207, 538
Fnu4HI GCNGC 9 cut(s) 237, 344, 372, 375, 473, 543, 576, 1020, 1200
FokI GGATG 6 cut(s) 22, 364, 455, 497, 806, 1115
FriOI GRGCYC 1 cut(s) 401
Fsp4HI GCNGC 9 cut(s) 237, 344, 372, 375, 473, 543, 576, 1020, 1200
FspBI CTAG 3 cut(s) 330, 569, 1053
GlaI GCGC 5 cut(s) 203, 347, 476, 509, 1182
GluI GCNGC 9 cut(s) 237, 344, 372, 375, 473, 543, 576, 1020, 1200
GsaI CCCAGC 1 cut(s) 1052
GsuI CTGGAG 2 cut(s) 42, 690
HaeIII GGCC 5 cut(s) 321, 357, 689, 1211, 1230
HapII CCGG 9 cut(s) 359, 402, 455, 525, 724, 964, 1088, 1100, 1171
HgaI GACGC 2 cut(s) 228, 377
HhaI GCGC 5 cut(s) 204, 348, 477, 510, 1183
Hin1I GRCGYC 1 cut(s) 239
Hin1II CATG 2 cut(s) 55, 391
Hin6I GCGC 5 cut(s) 202, 346, 475, 508, 1181
HinP1I GCGC 5 cut(s) 202, 346, 475, 508, 1181
HinfI GANTC 3 cut(s) 881, 967, 1214
HpaII CCGG 9 cut(s) 359, 402, 455, 525, 724, 964, 1088, 1100, 1171
HphI GGTGA 4 cut(s) 36, 83, 243, 445
Hpy166II GTNNAC 3 cut(s) 181, 863, 1067
Hpy188I TCNGA 4 cut(s) 9, 214, 273, 415
Hpy188III TCNNGA 8 cut(s) 586, 669, 764, 964, 1088, 1100, 1121, 1166
Hpy8I GTNNAC 3 cut(s) 181, 863, 1067
Hpy99I CGWCG 5 cut(s) 244, 247, 277, 304, 386
HpyAV CCTTC 3 cut(s) 106, 424, 475
HpyCH4III ACNGT 4 cut(s) 178, 365, 1030, 1094
HpyCH4V TGCA 3 cut(s) 638, 1019, 1199
HpyF3I CTNAG 5 cut(s) 495, 579, 789, 1270, 1275
Hsp92I GRCGYC 1 cut(s) 239
Hsp92II CATG 2 cut(s) 55, 391
HspAI GCGC 5 cut(s) 202, 346, 475, 508, 1181
Kpn2I TCCGGA 3 cut(s) 963, 1087, 1099
Kzo9I GATC 5 cut(s) 333, 871, 892, 1080, 1257
LguI GCTCTTC 1 cut(s) 211
LmnI GCTCC 6 cut(s) 23, 61, 404, 469, 671, 846
Lsp1109I GCAGC 5 cut(s) 484, 529, 562, 1031, 1211
LweI GCATC 3 cut(s) 386, 784, 1186
MaeI CTAG 3 cut(s) 330, 569, 1053
MaeIII GTNAC 2 cut(s) 365, 832
MalI GATC 5 cut(s) 335, 873, 894, 1082, 1259
MboI GATC 5 cut(s) 333, 871, 892, 1080, 1257
MboII GAAGA 9 cut(s) 21, 24, 198, 728, 752, 902, 909, 1166, 1253
MfeI CAATTG 1 cut(s) 1132
MflI RGATCY 1 cut(s) 892
MhlI GDGCHC 2 cut(s) 401, 1141
MlsI TGGCCA 1 cut(s) 1230
MluCI AATT 4 cut(s) 423, 705, 1074, 1132
MluNI TGGCCA 1 cut(s) 1230
MlyI GAGTC 2 cut(s) 875, 1223
MmeI TCCRAC 2 cut(s) 296, 1242
Mox20I TGGCCA 1 cut(s) 1230
MroI TCCGGA 3 cut(s) 963, 1087, 1099
MscI TGGCCA 1 cut(s) 1230
MseI TTAA 3 cut(s) 185, 804, 900
MslI CAYNNNNRTG 1 cut(s) 570
Msp20I TGGCCA 1 cut(s) 1230
MspA1I CMGCKG 2 cut(s) 542, 1202
MspI CCGG 9 cut(s) 359, 402, 455, 525, 724, 964, 1088, 1100, 1171
MspR9I CCNGG 4 cut(s) 323, 359, 525, 930
MunI CAATTG 1 cut(s) 1132
MvaI CCWGG 2 cut(s) 323, 930
MvnI CGCG 4 cut(s) 202, 371, 477, 510
NciI CCSGG 2 cut(s) 359, 525
NdeII GATC 5 cut(s) 333, 871, 892, 1080, 1257
NlaIII CATG 2 cut(s) 55, 391
NlaIV GGNNCC 4 cut(s) 25, 57, 631, 643
NmeAIII GCCGAG 1 cut(s) 1237
NmuCI GTSAC 1 cut(s) 365
PaeR7I CTCGAG 1 cut(s) 1119
PaqCI CACCTGC 1 cut(s) 629
PceI AGGCCT 1 cut(s) 689
PciSI GCTCTTC 1 cut(s) 211
PcsI WCGNNNNNNNCGW 1 cut(s) 239
PfeI GAWTC 1 cut(s) 967
PflMI CCANNNNNTGG 1 cut(s) 626
PkrI GCNGC 9 cut(s) 238, 345, 373, 376, 474, 544, 577, 1021, 1201
PleI GAGTC 2 cut(s) 875, 1222
PpsI GAGTC 2 cut(s) 875, 1222
PshBI ATTAAT 1 cut(s) 900
Psp124BI GAGCTC 1 cut(s) 401
Psp6I CCWGG 2 cut(s) 321, 928
PspFI CCCAGC 1 cut(s) 1048
PspGI CCWGG 2 cut(s) 321, 928
PspN4I GGNNCC 4 cut(s) 25, 57, 631, 643
PspPI GGNCC 4 cut(s) 319, 356, 361, 1209
PstI CTGCAG 2 cut(s) 640, 1021
PsuI RGATCY 1 cut(s) 892
PvuII CAGCTG 1 cut(s) 1202
RseI CAYNNNNRTG 1 cut(s) 570
Rsr2I CGGWCCG 1 cut(s) 361
RsrII CGGWCCG 1 cut(s) 361
SacI GAGCTC 1 cut(s) 401
SapI GCTCTTC 1 cut(s) 211
SaqAI TTAA 3 cut(s) 185, 804, 900
SatI GCNGC 9 cut(s) 237, 344, 372, 375, 473, 543, 576, 1020, 1200
Sau3AI GATC 5 cut(s) 333, 871, 892, 1080, 1257
Sau96I GGNCC 4 cut(s) 319, 356, 361, 1209
SchI GAGTC 2 cut(s) 875, 1223
ScrFI CCNGG 4 cut(s) 323, 359, 525, 930
SduI GDGCHC 2 cut(s) 401, 1141
SfaNI GCATC 3 cut(s) 386, 784, 1186
SfcI CTRYAG 2 cut(s) 636, 1017
Sfr274I CTCGAG 1 cut(s) 1119
SinI GGWCC 1 cut(s) 361
SlaI CTCGAG 1 cut(s) 1119
SmiMI CAYNNNNRTG 1 cut(s) 570
SmlI CTYRAG 2 cut(s) 1119, 1142
SmoI CTYRAG 2 cut(s) 1119, 1142
Sse9I AATT 4 cut(s) 423, 705, 1074, 1132
SseBI AGGCCT 1 cut(s) 689
SspMI CTAG 3 cut(s) 330, 569, 1053
SstI GAGCTC 1 cut(s) 401
StuI AGGCCT 1 cut(s) 689
StyD4I CCNGG 4 cut(s) 321, 357, 523, 928
StyI CCWWGG 1 cut(s) 885
TaaI ACNGT 4 cut(s) 178, 365, 1030, 1094
TaqI TCGA 4 cut(s) 745, 763, 1057, 1120
TasI AATT 4 cut(s) 423, 705, 1074, 1132
TauI GCSGC 4 cut(s) 239, 346, 374, 377
TfiI GAWTC 1 cut(s) 967
Tru1I TTAA 3 cut(s) 185, 804, 900
Tru9I TTAA 3 cut(s) 185, 804, 900
TseFI GTSAC 1 cut(s) 365
TseI GCWGC 5 cut(s) 472, 542, 575, 1019, 1199
Tsp45I GTSAC 1 cut(s) 365
TspDTI ATGAA 2 cut(s) 24, 198
TspGWI ACGGA 2 cut(s) 68, 370
Van91I CCANNNNNTGG 1 cut(s) 626
VpaK11BI GGWCC 1 cut(s) 361
VspI ATTAAT 1 cut(s) 900
XapI RAATTY 1 cut(s) 705
XhoI CTCGAG 1 cut(s) 1119
XspI CTAG 3 cut(s) 330, 569, 1053
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.