Rw7G030430

Lipolytic acyl hydrolase (LAH)

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
43216512 .. 43221326
4815 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G030430.1

Sequence Viewer

Length: 1275 bp
ATGTTTCGGAGGAAACTAACTGGAGCCTCGTCTTCATCCTCCTCACCACTCATGGCTCCCTACTCCTCTCTCCTCCTACGTCCTCAACCTCACCCCTTCTCTCTCTCCACCACCAACCCCAACCCTAACCCCAACCCTAATCTCGTCAACCGCTACACCTTACTCCCTCTCCGCACCGTAAACCTGAAGTCCTCTCTCCCGCGCTCTTCATCTGACCCCGACACCAATCGCACGGCGGCGTCCTCGGCTTCACCTCCACCGCCTCCGACGACGACGAAGAAGTCGTTTGCTGTTGCGACGGGGGAGTTGTTCTTGGGCCTGGCGACTAGGATCATCAAGCGGCGCAATGGAGGCCCGGACCGTGACGCGGCGGCCTCCGTCGCCATGTTTGAGAGCTCCGGCAAGTTCTCCGATGAGAGAATTGGGAAGGTGATTGAGGATGAGCTTCAGCCGGAGGTCGTTTGGGAGCAGCGCGTGAAGGATGTGGAGGCTGAGAAAGAGAGGCGCGTGATTACAAGTCCCGGCTTTAGTTTCTCCGCTGCGGGACTTCTTTTCCCTTACCATCTAGGTGCTGCTCAGTTCTTGATTGAGAATGGCTATATCAAGGAAACCACTCCATTAGCTGGTTCCTCTGCAGGTGCCATTGTCTGTGCTGTGATTGCCTCTGGAGCAAGTATGGCAGAGGCCTTACAAGCTACTAAAATTCTGGCTGAAGATTGCCGGAACAGAGGGACAGCTTTTCGACTTGGGGCTGTTCTTCGAGATGTTCTCCAAAAGTTTTTGCCTGAGGATGCTCATATTAGGTCTAATGGGAGGGTTAGAGTTGCTGTAACACAGCTCCTATGGAGACCAAGAGGTTTATTGGTGGATCAGTTTGACTCCAAGGAAGATCTCATTAATGCGGTTTTCACTTCTTCCTTTATCCCAGGGTATCTTGCACCAAGACCAGCAACGATGTTCCGGAATCGTCTTTGTATTGATGGCGGCTTGACTTTATTTATGCCACCAACATCTGCAGCAAAGACGGTTCGTGTTTGTGCTTTCCCAGCTAGTCGATTGGGTTTACAAGGAATTGGGATCAGTCCAGACTGTAATCCGGATGATAGGGCAACCCCTCGAGAGCTTTTCAATTGGGCACTTGAGCCAGCAGAAGATGATATTCTTGACCGGCTTTTTGCGCTTGGATATAAAGATGCAGCTGTATGGGCCGAGTCCAACCCAGTTGGCCAAATAGTTGAAGATGATAGTTCCTTGATCGGTAGTGGCTTAGCTTAG

Protein Analysis

424

Amino Acids

45.78

Weight (kDa)

8.55

Isoelectric Point (pI)

44.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Patatin PF01734 177 - 338 4.1e-18 Patatin-like phospholipase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 626
AasI GACNNNNNNGTC 1 cut(s) 280
Acc36I ACCTGC 1 cut(s) 626
AccB1I GGYRCC 1 cut(s) 638
AccB7I CCANNNNNTGG 1 cut(s) 623
AccII CGCG 4 cut(s) 202, 368, 474, 507
AccIII TCCGGA 2 cut(s) 960, 1096
AclWI GGATC 3 cut(s) 338, 876, 1085
AcoI YGGCCR 1 cut(s) 1225
AcsI RAATTY 1 cut(s) 702
AcuI CTGAAG 3 cut(s) 206, 431, 732
AcyI GRCGYC 1 cut(s) 239
AfiI CCNNNNNNNGG 2 cut(s) 367, 623
AgsI TTSAA 2 cut(s) 1129, 1238
AjnI CCWGG 2 cut(s) 318, 925
Alw21I GWGCWC 1 cut(s) 398
Alw26I GTCTC 1 cut(s) 841
AlwI GGATC 3 cut(s) 338, 876, 1085
Ama87I CYCGRG 1 cut(s) 1116
Aor13HI TCCGGA 2 cut(s) 960, 1096
AoxI GGCC 6 cut(s) 316, 352, 372, 684, 1206, 1225
ApeKI GCWGC 5 cut(s) 469, 539, 572, 1016, 1196
ApoI RAATTY 1 cut(s) 702
ArsI GACNNNNNNTTYG 2 cut(s) 1157, 1189
AseI ATTAAT 1 cut(s) 897
AspLEI GCGC 5 cut(s) 204, 345, 474, 507, 1180
AspS9I GGNCC 4 cut(s) 316, 353, 358, 1206
AsuC2I CCSGG 2 cut(s) 356, 522
AsuHPI GGTGA 4 cut(s) 36, 83, 243, 442
AvaI CYCGRG 1 cut(s) 1116
AvaII GGWCC 1 cut(s) 358
AxyI CCTNAGG 1 cut(s) 786
BaeGI GKGCMC 1 cut(s) 1138
BalI TGGCCA 1 cut(s) 1227
BanI GGYRCC 1 cut(s) 638
BanII GRGCYC 1 cut(s) 398
BbsI GAAGAC 1 cut(s) 24
Bbv12I GWGCWC 1 cut(s) 398
BbvI GCAGC 5 cut(s) 481, 526, 559, 1028, 1208
BccI CCATC 2 cut(s) 570, 974
BceAI ACGGC 1 cut(s) 249
BciT130I CCWGG 2 cut(s) 320, 927
BcnI CCSGG 2 cut(s) 356, 522
BcoDI GTCTC 1 cut(s) 841
BfaI CTAG 3 cut(s) 327, 566, 1050
BfmI CTRYAG 2 cut(s) 633, 1014
BfuAI ACCTGC 1 cut(s) 626
BglII AGATCT 1 cut(s) 889
BlpI GCTNAGC 1 cut(s) 1267
Bme1390I CCNGG 4 cut(s) 320, 356, 522, 927
Bme18I GGWCC 1 cut(s) 358
BmeT110I CYCGRG 1 cut(s) 1116
BmgT120I GGNCC 4 cut(s) 316, 353, 358, 1206
BmiI GGNNCC 4 cut(s) 25, 57, 628, 640
BmrFI CCNGG 4 cut(s) 320, 356, 522, 927
BmrI ACTGGG 1 cut(s) 1214
BmsI GCATC 2 cut(s) 781, 1183
BmuI ACTGGG 1 cut(s) 1214
BpiI GAAGAC 1 cut(s) 24
BplI GAGNNNNNCTC 2 cut(s) 753, 785
BpmI CTGGAG 2 cut(s) 42, 687
Bpu1102I GCTNAGC 1 cut(s) 1267
BpuEI CTTGAG 1 cut(s) 1160
BpuMI CCSGG 2 cut(s) 356, 522
BsaHI GRCGYC 1 cut(s) 239
BsaI GGTCTC 1 cut(s) 841
BsaJI CCNNGG 4 cut(s) 243, 882, 925, 926
BsaWI WCCGGW 2 cut(s) 960, 1096
BsaXI ACNNNNNCTCC 2 cut(s) 153, 183
Bsc4I CCNNNNNNNGG 2 cut(s) 367, 623
Bse118I RCCGGY 1 cut(s) 1167
Bse1I ACTGG 2 cut(s) 25, 1220
Bse21I CCTNAGG 1 cut(s) 786
Bse3DI GCAATG 1 cut(s) 352
BseAI TCCGGA 2 cut(s) 960, 1096
BseBI CCWGG 2 cut(s) 320, 927
BseDI CCNNGG 4 cut(s) 243, 882, 925, 926
BseGI GGATG 5 cut(s) 35, 445, 487, 796, 1105
BseLI CCNNNNNNNGG 2 cut(s) 367, 623
BseMI GCAATG 1 cut(s) 352
BseMII CTCAG 3 cut(s) 483, 590, 777
BseNI ACTGG 2 cut(s) 25, 1220
BseRI GAGGAG 3 cut(s) 31, 55, 62
BseSI GKGCMC 1 cut(s) 1138
BseXI GCAGC 5 cut(s) 481, 526, 559, 1028, 1208
BseYI CCCAGC 1 cut(s) 1045
Bsh1236I CGCG 4 cut(s) 202, 368, 474, 507
BshFI GGCC 6 cut(s) 318, 354, 374, 686, 1208, 1227
BshNI GGYRCC 1 cut(s) 638
BsiHKAI GWGCWC 1 cut(s) 398
BsiHKCI CYCGRG 1 cut(s) 1116
BsiSI CCGG 8 cut(s) 356, 399, 452, 522, 721, 961, 1097, 1168
BslFI GGGAC 3 cut(s) 504, 558, 745
BslI CCNNNNNNNGG 2 cut(s) 367, 623
BsmAI GTCTC 1 cut(s) 841
BsmFI GGGAC 3 cut(s) 504, 558, 745
BsnI GGCC 6 cut(s) 318, 354, 374, 686, 1208, 1227
Bso31I GGTCTC 1 cut(s) 841
BsoBI CYCGRG 1 cut(s) 1116
Bsp1286I GDGCHC 2 cut(s) 398, 1138
Bsp13I TCCGGA 2 cut(s) 960, 1096
Bsp143I GATC 5 cut(s) 330, 868, 889, 1077, 1254
Bsp1720I GCTNAGC 1 cut(s) 1267
BspANI GGCC 6 cut(s) 318, 354, 374, 686, 1208, 1227
BspCNI CTCAG 3 cut(s) 484, 589, 778
BspEI TCCGGA 2 cut(s) 960, 1096
BspFNI CGCG 4 cut(s) 202, 368, 474, 507
BspLI GGNNCC 4 cut(s) 25, 57, 628, 640
BspMAI CTGCAG 2 cut(s) 637, 1018
BspMI ACCTGC 1 cut(s) 626
BspPI GGATC 3 cut(s) 338, 876, 1085
BspQI GCTCTTC 1 cut(s) 211
BspT107I GGYRCC 1 cut(s) 638
BspTNI GGTCTC 1 cut(s) 841
BsrDI GCAATG 1 cut(s) 352
BsrFI RCCGGY 1 cut(s) 1167
BsrI ACTGG 2 cut(s) 25, 1220
BssAI RCCGGY 1 cut(s) 1167
BssECI CCNNGG 4 cut(s) 243, 882, 925, 926
BssMI GATC 5 cut(s) 330, 868, 889, 1077, 1254
BssNI GRCGYC 1 cut(s) 239
BssT1I CCWWGG 1 cut(s) 882
Bst2UI CCWGG 2 cut(s) 320, 927
Bst4CI ACNGT 4 cut(s) 178, 362, 1027, 1091
Bst6I CTCTTC 1 cut(s) 211
BstACI GRCGYC 1 cut(s) 239
BstC8I GCNNGC 1 cut(s) 1146
BstDEI CTNAG 5 cut(s) 492, 576, 786, 1267, 1272
BstF5I GGATG 5 cut(s) 35, 445, 487, 796, 1105
BstFNI CGCG 4 cut(s) 202, 368, 474, 507
BstHHI GCGC 5 cut(s) 204, 345, 474, 507, 1180
BstKTI GATC 5 cut(s) 333, 871, 892, 1080, 1257
BstMAI GTCTC 1 cut(s) 841
BstMBI GATC 5 cut(s) 330, 868, 889, 1077, 1254
BstNI CCWGG 2 cut(s) 320, 927
BstSCI CCNGG 4 cut(s) 318, 354, 520, 925
BstSFI CTRYAG 2 cut(s) 633, 1014
BstSLI GKGCMC 1 cut(s) 1138
BstUI CGCG 4 cut(s) 202, 368, 474, 507
BstV1I GCAGC 5 cut(s) 481, 526, 559, 1028, 1208
BstV2I GAAGAC 1 cut(s) 24
BstX2I RGATCY 1 cut(s) 889
BstYI RGATCY 1 cut(s) 889
Bsu36I CCTNAGG 1 cut(s) 786
BsuRI GGCC 6 cut(s) 318, 354, 374, 686, 1208, 1227
BtsCI GGATG 5 cut(s) 35, 445, 487, 796, 1105
BveI ACCTGC 1 cut(s) 626
Cac8I GCNNGC 1 cut(s) 1146
CfoI GCGC 5 cut(s) 204, 345, 474, 507, 1180
Cfr10I RCCGGY 1 cut(s) 1167
Cfr13I GGNCC 4 cut(s) 316, 353, 358, 1206
CpoI CGGWCCG 1 cut(s) 358
CseI GACGC 2 cut(s) 228, 374
CspI CGGWCCG 1 cut(s) 358
CviAII CATG 2 cut(s) 52, 385
DdeI CTNAG 5 cut(s) 492, 576, 786, 1267, 1272
DpnI GATC 5 cut(s) 332, 870, 891, 1079, 1256
DpnII GATC 5 cut(s) 330, 868, 889, 1077, 1254
DrdI GACNNNNNNGTC 1 cut(s) 280
DseDI GACNNNNNNGTC 1 cut(s) 280
EaeI YGGCCR 1 cut(s) 1225
Eam1104I CTCTTC 1 cut(s) 211
EarI CTCTTC 1 cut(s) 211
Ecl136II GAGCTC 1 cut(s) 396
Eco130I CCWWGG 1 cut(s) 882
Eco147I AGGCCT 1 cut(s) 686
Eco24I GRGCYC 1 cut(s) 398
Eco31I GGTCTC 1 cut(s) 841
Eco47I GGWCC 1 cut(s) 358
Eco53kI GAGCTC 1 cut(s) 396
Eco57I CTGAAG 3 cut(s) 206, 431, 732
Eco81I CCTNAGG 1 cut(s) 786
Eco88I CYCGRG 1 cut(s) 1116
EcoICRI GAGCTC 1 cut(s) 396
EcoRII CCWGG 2 cut(s) 318, 925
EcoT14I CCWWGG 1 cut(s) 882
EcoT38I GRGCYC 1 cut(s) 398
ErhI CCWWGG 1 cut(s) 882
FaeI CATG 2 cut(s) 55, 388
FaiI YATR 9 cut(s) 53, 386, 600, 677, 798, 844, 1001, 1188, 1204
FaqI GGGAC 3 cut(s) 504, 558, 745
FatI CATG 2 cut(s) 51, 384
FauI CCCGC 2 cut(s) 207, 535
FokI GGATG 5 cut(s) 22, 452, 494, 803, 1112
FriOI GRGCYC 1 cut(s) 398
FspBI CTAG 3 cut(s) 327, 566, 1050
GlaI GCGC 5 cut(s) 203, 344, 473, 506, 1179
GsaI CCCAGC 1 cut(s) 1049
GsuI CTGGAG 2 cut(s) 42, 687
HaeIII GGCC 6 cut(s) 318, 354, 374, 686, 1208, 1227
HapII CCGG 8 cut(s) 356, 399, 452, 522, 721, 961, 1097, 1168
HgaI GACGC 2 cut(s) 228, 374
HhaI GCGC 5 cut(s) 204, 345, 474, 507, 1180
Hin1I GRCGYC 1 cut(s) 239
Hin1II CATG 2 cut(s) 55, 388
Hin6I GCGC 5 cut(s) 202, 343, 472, 505, 1178
HinP1I GCGC 5 cut(s) 202, 343, 472, 505, 1178
HincII GTYRAC 1 cut(s) 148
HindII GTYRAC 1 cut(s) 148
HinfI GANTC 3 cut(s) 878, 964, 1211
HpaII CCGG 8 cut(s) 356, 399, 452, 522, 721, 961, 1097, 1168
HphI GGTGA 4 cut(s) 36, 83, 243, 442
Hpy166II GTNNAC 3 cut(s) 148, 181, 1064
Hpy188I TCNGA 4 cut(s) 9, 214, 267, 412
Hpy188III TCNNGA 8 cut(s) 583, 666, 761, 961, 1085, 1097, 1118, 1163
Hpy8I GTNNAC 3 cut(s) 148, 181, 1064
Hpy99I CGWCG 5 cut(s) 271, 274, 277, 301, 383
HpyAV CCTTC 3 cut(s) 106, 421, 472
HpyCH4III ACNGT 4 cut(s) 178, 362, 1027, 1091
HpyCH4IV ACGT 1 cut(s) 79
HpyCH4V TGCA 4 cut(s) 635, 938, 1016, 1196
HpyF3I CTNAG 5 cut(s) 492, 576, 786, 1267, 1272
HpySE526I ACGT 1 cut(s) 79
Hsp92I GRCGYC 1 cut(s) 239
Hsp92II CATG 2 cut(s) 55, 388
HspAI GCGC 5 cut(s) 202, 343, 472, 505, 1178
Kpn2I TCCGGA 2 cut(s) 960, 1096
Kzo9I GATC 5 cut(s) 330, 868, 889, 1077, 1254
LguI GCTCTTC 1 cut(s) 211
LmnI GCTCC 6 cut(s) 23, 61, 401, 466, 668, 843
Lsp1109I GCAGC 5 cut(s) 481, 526, 559, 1028, 1208
LweI GCATC 2 cut(s) 781, 1183
MaeI CTAG 3 cut(s) 327, 566, 1050
MaeII ACGT 1 cut(s) 79
MaeIII GTNAC 2 cut(s) 362, 829
MalI GATC 5 cut(s) 332, 870, 891, 1079, 1256
MboI GATC 5 cut(s) 330, 868, 889, 1077, 1254
MboII GAAGA 9 cut(s) 24, 198, 289, 725, 749, 899, 906, 1163, 1250
MfeI CAATTG 1 cut(s) 1129
MflI RGATCY 1 cut(s) 889
MhlI GDGCHC 2 cut(s) 398, 1138
MlsI TGGCCA 1 cut(s) 1227
MluCI AATT 4 cut(s) 420, 702, 1071, 1129
MluNI TGGCCA 1 cut(s) 1227
MlyI GAGTC 2 cut(s) 872, 1220
MmeI TCCRAC 2 cut(s) 290, 1239
Mox20I TGGCCA 1 cut(s) 1227
MroI TCCGGA 2 cut(s) 960, 1096
MscI TGGCCA 1 cut(s) 1227
MseI TTAA 1 cut(s) 897
MslI CAYNNNNRTG 1 cut(s) 567
Msp20I TGGCCA 1 cut(s) 1227
MspA1I CMGCKG 2 cut(s) 539, 1199
MspI CCGG 8 cut(s) 356, 399, 452, 522, 721, 961, 1097, 1168
MspR9I CCNGG 4 cut(s) 320, 356, 522, 927
MunI CAATTG 1 cut(s) 1129
MvaI CCWGG 2 cut(s) 320, 927
MvnI CGCG 4 cut(s) 202, 368, 474, 507
NciI CCSGG 2 cut(s) 356, 522
NdeII GATC 5 cut(s) 330, 868, 889, 1077, 1254
NlaIII CATG 2 cut(s) 55, 388
NlaIV GGNNCC 4 cut(s) 25, 57, 628, 640
NmeAIII GCCGAG 2 cut(s) 224, 1234
NmuCI GTSAC 1 cut(s) 362
PaeR7I CTCGAG 1 cut(s) 1116
PaqCI CACCTGC 1 cut(s) 626
PasI CCCWGGG 1 cut(s) 926
PceI AGGCCT 1 cut(s) 686
PciSI GCTCTTC 1 cut(s) 211
PcsI WCGNNNNNNNCGW 1 cut(s) 281
PfeI GAWTC 1 cut(s) 964
PflMI CCANNNNNTGG 1 cut(s) 623
PleI GAGTC 2 cut(s) 872, 1219
PpsI GAGTC 2 cut(s) 872, 1219
PshBI ATTAAT 1 cut(s) 897
Psp124BI GAGCTC 1 cut(s) 398
Psp6I CCWGG 2 cut(s) 318, 925
PspFI CCCAGC 1 cut(s) 1045
PspGI CCWGG 2 cut(s) 318, 925
PspN4I GGNNCC 4 cut(s) 25, 57, 628, 640
PspPI GGNCC 4 cut(s) 316, 353, 358, 1206
PstI CTGCAG 2 cut(s) 637, 1018
PsuI RGATCY 1 cut(s) 889
PvuII CAGCTG 1 cut(s) 1199
RseI CAYNNNNRTG 1 cut(s) 567
Rsr2I CGGWCCG 1 cut(s) 358
RsrII CGGWCCG 1 cut(s) 358
SacI GAGCTC 1 cut(s) 398
SapI GCTCTTC 1 cut(s) 211
SaqAI TTAA 1 cut(s) 897
Sau3AI GATC 5 cut(s) 330, 868, 889, 1077, 1254
Sau96I GGNCC 4 cut(s) 316, 353, 358, 1206
SchI GAGTC 2 cut(s) 872, 1220
ScrFI CCNGG 4 cut(s) 320, 356, 522, 927
SduI GDGCHC 2 cut(s) 398, 1138
SfaNI GCATC 2 cut(s) 781, 1183
SfcI CTRYAG 2 cut(s) 633, 1014
Sfr274I CTCGAG 1 cut(s) 1116
SinI GGWCC 1 cut(s) 358
SlaI CTCGAG 1 cut(s) 1116
SmiMI CAYNNNNRTG 1 cut(s) 567
SmlI CTYRAG 2 cut(s) 1116, 1139
SmoI CTYRAG 2 cut(s) 1116, 1139
Sse9I AATT 4 cut(s) 420, 702, 1071, 1129
SseBI AGGCCT 1 cut(s) 686
SspMI CTAG 3 cut(s) 327, 566, 1050
SstI GAGCTC 1 cut(s) 398
StuI AGGCCT 1 cut(s) 686
StyD4I CCNGG 4 cut(s) 318, 354, 520, 925
StyI CCWWGG 1 cut(s) 882
TaaI ACNGT 4 cut(s) 178, 362, 1027, 1091
TaiI ACGT 1 cut(s) 82
TaqI TCGA 4 cut(s) 742, 760, 1054, 1117
TasI AATT 4 cut(s) 420, 702, 1071, 1129
TauI GCSGC 5 cut(s) 239, 343, 371, 374, 987
TfiI GAWTC 1 cut(s) 964
Tru1I TTAA 1 cut(s) 897
Tru9I TTAA 1 cut(s) 897
TseFI GTSAC 1 cut(s) 362
TseI GCWGC 5 cut(s) 469, 539, 572, 1016, 1196
Tsp45I GTSAC 1 cut(s) 362
TspDTI ATGAA 2 cut(s) 24, 198
TspGWI ACGGA 1 cut(s) 367
Van91I CCANNNNNTGG 1 cut(s) 623
VpaK11BI GGWCC 1 cut(s) 358
VspI ATTAAT 1 cut(s) 897
XapI RAATTY 1 cut(s) 702
XhoI CTCGAG 1 cut(s) 1116
XspI CTAG 3 cut(s) 327, 566, 1050
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.