RNA-binding protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G04600 |
| fragaria_vesca | FvH4_5g27351 |
| malus_domestica | MD08G1243300.v1.1 MD15G1437100.v1.1 |
| prunus_persica | Prupe.1G580700_v2.0.a1 Prupe.1G580700_v2.0.a1 Prupe.1G580700_v2.0.a1 Prupe.1G580700_v2.0.a1 |
| pyrus_communis | pycom08g21100 pycom15g38550 |
| rosa_chinensis | RchiOBHm_Chr4g0433501 |
| rosa_laevigata | RLG00000006750 |
| rosa_multiflora | Rmu_sc0000312.1_g000003 Rmu_sc0000759.1_g000001 Rmu_sc0018241.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00375020 |
| rosa_rugosa | Rorug04G0269100 |
| rosa_samantha | Rh4AG323700 Rh4BG331700 Rh4CG347000 Rh4DG328200 |
| rosa_wichuraiana | Rw0G020110 Rw4G028050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfiI | CCNNNNNNNGG | 1 cut(s) | 125 |
| AluBI | AGCT | 5 cut(s) | 41, 65, 104, 137, 145 |
| AluI | AGCT | 5 cut(s) | 41, 65, 104, 137, 145 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 107 |
| Ama87I | CYCGRG | 1 cut(s) | 149 |
| ApeKI | GCWGC | 3 cut(s) | 65, 68, 104 |
| AspS9I | GGNCC | 1 cut(s) | 131 |
| AvaI | CYCGRG | 1 cut(s) | 149 |
| AvaII | GGWCC | 1 cut(s) | 131 |
| BbvI | GCAGC | 3 cut(s) | 52, 55, 91 |
| BccI | CCATC | 1 cut(s) | 220 |
| BceAI | ACGGC | 1 cut(s) | 223 |
| BciVI | GTATCC | 1 cut(s) | 192 |
| BfmI | CTRYAG | 2 cut(s) | 99, 177 |
| BfuI | GTATCC | 1 cut(s) | 192 |
| BisI | GCNGC | 3 cut(s) | 66, 69, 105 |
| BlsI | GCNGC | 3 cut(s) | 67, 70, 106 |
| Bme18I | GGWCC | 1 cut(s) | 131 |
| BmeT110I | CYCGRG | 1 cut(s) | 149 |
| BmgT120I | GGNCC | 1 cut(s) | 131 |
| BsaJI | CCNNGG | 1 cut(s) | 150 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 125 |
| BseDI | CCNNGG | 1 cut(s) | 150 |
| BseGI | GGATG | 1 cut(s) | 175 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 125 |
| BseXI | GCAGC | 3 cut(s) | 52, 55, 91 |
| BsiHKCI | CYCGRG | 1 cut(s) | 149 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 125 |
| BsoBI | CYCGRG | 1 cut(s) | 149 |
| BssECI | CCNNGG | 1 cut(s) | 150 |
| Bst4CI | ACNGT | 2 cut(s) | 88, 181 |
| BstF5I | GGATG | 1 cut(s) | 175 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 74, 101 |
| BstSFI | CTRYAG | 2 cut(s) | 99, 177 |
| BstV1I | GCAGC | 3 cut(s) | 52, 55, 91 |
| BsuI | GTATCC | 1 cut(s) | 192 |
| BtsCI | GGATG | 1 cut(s) | 175 |
| CaiI | CAGNNNCTG | 1 cut(s) | 107 |
| Cfr13I | GGNCC | 1 cut(s) | 131 |
| CviJI | RGCY | 8 cut(s) | 23, 41, 65, 104, 137, 145, 160, 210 |
| CviKI_1 | RGCY | 8 cut(s) | 23, 41, 65, 104, 137, 145, 160, 210 |
| Eco47I | GGWCC | 1 cut(s) | 131 |
| Eco88I | CYCGRG | 1 cut(s) | 149 |
| FaiI | YATR | 2 cut(s) | 187, 216 |
| Fnu4HI | GCNGC | 3 cut(s) | 66, 69, 105 |
| FokI | GGATG | 1 cut(s) | 182 |
| Fsp4HI | GCNGC | 3 cut(s) | 66, 69, 105 |
| GluI | GCNGC | 3 cut(s) | 66, 69, 105 |
| Hpy188I | TCNGA | 1 cut(s) | 198 |
| HpyAV | CCTTC | 3 cut(s) | 119, 214, 224 |
| HpyCH4III | ACNGT | 2 cut(s) | 88, 181 |
| HpyCH4V | TGCA | 1 cut(s) | 238 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 74, 101 |
| LmnI | GCTCC | 1 cut(s) | 150 |
| LpnPI | CCDG | 1 cut(s) | 147 |
| Lsp1109I | GCAGC | 3 cut(s) | 52, 55, 91 |
| MaeIII | GTNAC | 2 cut(s) | 82, 88 |
| MboII | GAAGA | 1 cut(s) | 36 |
| MfeI | CAATTG | 1 cut(s) | 11 |
| MluCI | AATT | 2 cut(s) | 11, 32 |
| MmeI | TCCRAC | 1 cut(s) | 176 |
| MnlI | CCTC | 4 cut(s) | 34, 145, 160, 213 |
| MspA1I | CMGCKG | 1 cut(s) | 104 |
| MunI | CAATTG | 1 cut(s) | 11 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 74, 101 |
| PkrI | GCNGC | 3 cut(s) | 67, 70, 106 |
| PspPI | GGNCC | 1 cut(s) | 131 |
| PstNI | CAGNNNCTG | 1 cut(s) | 107 |
| PvuII | CAGCTG | 1 cut(s) | 104 |
| SatI | GCNGC | 3 cut(s) | 66, 69, 105 |
| Sau96I | GGNCC | 1 cut(s) | 131 |
| SetI | ASST | 8 cut(s) | 43, 67, 106, 130, 139, 147, 205, 235 |
| SfcI | CTRYAG | 2 cut(s) | 99, 177 |
| SgeI | CNNG | 6 cut(s) | 127, 146, 150, 161, 163, 218 |
| SinI | GGWCC | 1 cut(s) | 131 |
| Sse9I | AATT | 2 cut(s) | 11, 32 |
| TaaI | ACNGT | 2 cut(s) | 88, 181 |
| TasI | AATT | 2 cut(s) | 11, 32 |
| TseI | GCWGC | 3 cut(s) | 65, 68, 104 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| VpaK11BI | GGWCC | 1 cut(s) | 131 |