MD16G1036800.v1.1

PB1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0011786
Physical Location & Seq
Forward (+)
2652395 .. 2655292
2898 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1036800.v1.1.491

Sequence Viewer

Length: 2121 bp
ATGGACCCACCACCAGCGGGCCCGCCGCTGCAACCCCACCACCTCAACTACCCGGAGTCCCTAGACTCCTCCCCTCGCTCCCGCAACACCGACTCATGGGACGATCCCATCCCCCCCACCAACAGGCTCCGCCTCATGTGCAGCTACGGCGGCCACATCGTCCCCCGCCCCCACGACAAGTCGCTGTGCTACGTCGGTGGCGACACCCGAATCGTCGTCGTCGACCGCCAGACCTCCCTCTCCGAACTCTCCAACCGCCTCTCCAAGACTCTCCTCAGCGGCCGACCCTTCACCCTCAAGTACCAGCTCCCCAGCGAAGACCTCGATTCCTTAATCTCCGTCACCACCGACGAGGACCTCGACAACATGATCGACGAGTACGAACGCACGGCCAACCACAGCGGCGCTTCGTCCAAACCCTCACGCCTCCGTCTCTTTCTCTTCCCCCTGAAGCCCGAGTCGTCGCAATCGATGGGGCCCATTCTCGATATTCCAGCCAATAAGTCTGAGGACTGGTTCCTGAACGCGCTCAATGGCGAGTCCGATATGCTAAATCGGGGCTTCTCCGACTCCGCCTCTGTCAATTGCTTGCTGGGTCTCGACGACGATTCGATTTCAGGCGGGGCTGCCAATAATTTGGACTCCGGTTCGAGAGACGTCGAGGCTTCAGTTCCTGCGAATGGCAAGAATGCCAAACAGGGCGGAGGTGGTGGCGGTGGGAACGGGCAGGACGTTCACTCCGTCCCCGATTCGCCGATGCTGGAGAACTCCTCTTCGTTTGGGTCCACGTCATCGTCGCCATCGCTTGCGAACTTGCCGCCGATTCGGGTCCACGTGGAAGATGGTATCGGCGGCGGAGGTGGAGATCGGATTAGAGTGCAGGATCAGAAGATGGGGATAGAAGAGCAGTTCGCTCGGATGACTGTTGGTGGTGGTGTTGGCCCTGTTGGGCAGAAGCAAGACGATGGTGGCTTCGCGGTCCTTTCATCGCCTCCTCTGATTCCCACTACCATCGTGGCATCCGCCGCGCCGCTGAGCACGGCCACCGATTACTTGAATCGCGTAGTTTCGGACGATGAGCGATCCGATCACGGCGCACCAGTTGGGTATCGGAAACCGACGCCTCCTCAGCCTCAGCTTCAGCCACAGACTCTGCCTCCTCAGTCTCAGCAGCCTAAATCTAGTGGCGTTCTTGATTTGCCCTCCCCAGATTCTGTTTCAAGTGACAATAGTTTATCAAATGCCATGTCTCGCCCAAAACCTGTAATTTATCAAGACCCAGTAGTTCAAATCCCCTCTGCAAACGCCAGGTTTCCGGCAAACCTAGTTGATCCGAAATTAAATCTTTCCGATCCAAACTCTCGGATTCAGATGCAACAACAGGTTCACGATTCTGGGTACGTTTTGCAATCGCAATTCGATCATCAGCAGCAGCAGCAACACCAACAACACCCACAACAAGCACAACAGCCGCATCAATTTATACACGCTGGAACACATTACATCCAGCACCACCCAGGTTCGGTCCCCATTCCAGCGTACTACCCAGTATATCCGCCCCAGCAGCAACAGCACCACCATCATCATCCCCAGCTTGATCAGCAGCAGCAGCAGCAGCAGCAATACCAAGTTTATTACATGCCTGCCAGGCAGCCACAACCTTACACCACTTTGCCAGTTCAGCAATCGAATATCAGCGATTCTGCCGCTCCTATCCCTTCGACCCGCTCCCAAACGCCTCCTAACCCTGCCATGTCCTCCTCTTCTGCGCCTTACAACCAGATGAGGAATCCCCAAATTGCCAAACCCGAACTGGGTGCCCCAACAGGGGTGTACAGAACGGCAACCACAGCAGCTCCGCCTCTAGTTCAAGTCCCATCTGCTCAGCATCAGCAGCAGTATGTCGGCTACCCCACCCAGATGCACCATCCGTCCCAATCGGCCGTTCCTTCTTCTGGGGCCAATGCCAGTTATGCCTATGAATATGCTACTGATCCCTCTCATGCGCCGATATACTACACACAGCCTCTGGCGCCCTCAATGCCTTCTCAGTACCAAACCATGACGCTGCCGGAAGTCTCTGCTCAGCTTCCCACCGACAACATCAAGCAGCAGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PB1

Protein Analysis

707

Amino Acids

76.6

Weight (kDa)

5.7

Isoelectric Point (pI)

68.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 58 - 149 1.7e-17 PB1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011786)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01190
fragaria_vesca FvH4_4g26650 FvH4_4g26650 FvH4_4g26650
malus_domestica MD13G1034900.v1.1 MD16G1036800.v1.1
prunus_persica Prupe.1G317300_v2.0.a1
pyrus_communis pycom13g03050 pycom16g03170
rosa_chinensis RchiOBHm_Chr4g0434361
rosa_laevigata RLG00000006680
rosa_multiflora Rmu_sc0016328.1_g000003
rosa_roxburghii Rroxscaffold_5G00375720
rosa_rugosa Rorug04G0276300
rosa_samantha Rh4AG331400 Rh4BG339300 Rh4CG354400 Rh4DG334400
rosa_wichuraiana Rw4G028740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 660
AccB1I GGYRCC 2 cut(s) 1817, 2032
AccBSI CCGCTC 2 cut(s) 1709, 1728
AccI GTMKAC 1 cut(s) 222
AccII CGCG 4 cut(s) 527, 977, 1028, 1062
AclWI GGATC 6 cut(s) 98, 891, 1077, 1325, 1346, 1988
AcoI YGGCCR 5 cut(s) 151, 280, 390, 1041, 1941
AcuI CTGAAG 3 cut(s) 470, 651, 1124
AcvI CACGTG 1 cut(s) 835
AcyI GRCGYC 3 cut(s) 657, 1121, 2033
AfaI GTAC 6 cut(s) 302, 380, 1400, 1541, 1835, 2054
AfiI CCNNNNNNNGG 9 cut(s) 17, 96, 123, 680, 1522, 1814, 1827, 1828, 1955
AgsI TTSAA 4 cut(s) 1057, 1221, 1289, 1871
AjiI CACGTC 1 cut(s) 789
AjnI CCWGG 3 cut(s) 1307, 1516, 1646
AjuI GAANNNNNNNTTGG 2 cut(s) 1929, 1961
AluBI AGCT 6 cut(s) 144, 307, 1138, 1594, 1856, 2089
AluI AGCT 6 cut(s) 144, 307, 1138, 1594, 1856, 2089
Alw21I GWGCWC 1 cut(s) 1040
Alw26I GTCTC 6 cut(s) 437, 602, 648, 1170, 1254, 2083
AlwI GGATC 6 cut(s) 98, 891, 1077, 1325, 1346, 1988
AlwNI CAGNNNCTG 4 cut(s) 674, 1153, 1214, 2029
Ama87I CYCGRG 1 cut(s) 455
AoxI GGCC 9 cut(s) 19, 151, 280, 390, 476, 940, 1041, 1941, 1959
ApaI GGGCCC 2 cut(s) 23, 480
ArsI GACNNNNNNTTYG 2 cut(s) 1232, 1264
AspLEI GCGC 7 cut(s) 407, 529, 1030, 1097, 1771, 2008, 2035
AsuC2I CCSGG 1 cut(s) 53
AsuHPI GGTGA 2 cut(s) 283, 334
AvaI CYCGRG 1 cut(s) 455
AvaII GGWCC 6 cut(s) 4, 355, 783, 829, 979, 1525
BaeGI GKGCMC 3 cut(s) 23, 480, 1822
BanI GGYRCC 2 cut(s) 1817, 2032
BanII GRGCYC 2 cut(s) 23, 480
BbrPI CACGTG 1 cut(s) 835
BbsI GAAGAC 1 cut(s) 324
Bbv12I GWGCWC 1 cut(s) 1040
BbvCI CCTCAGC 3 cut(s) 275, 1128, 1134
BceAI ACGGC 6 cut(s) 163, 405, 1056, 1108, 1857, 1928
BcgI CGANNNNNNTGC 4 cut(s) 896, 930, 1799, 1833
BciT130I CCWGG 3 cut(s) 1309, 1518, 1648
BclI TGATCA 1 cut(s) 1597
BcnI CCSGG 1 cut(s) 53
BcoDI GTCTC 6 cut(s) 437, 602, 648, 1170, 1254, 2083
BfaI CTAG 4 cut(s) 62, 1182, 1325, 1865
BfoI RGCGCY 2 cut(s) 408, 2036
BglI GCCNNNNNGGC 1 cut(s) 1648
BlpI GCTNAGC 3 cut(s) 1034, 1884, 2085
Bme1390I CCNGG 4 cut(s) 53, 1309, 1518, 1648
Bme18I GGWCC 6 cut(s) 4, 355, 783, 829, 979, 1525
BmeT110I CYCGRG 1 cut(s) 455
BmgBI CACGTC 1 cut(s) 789
BmrFI CCNGG 4 cut(s) 53, 1309, 1518, 1648
BmrI ACTGGG 3 cut(s) 1274, 1541, 1823
BmsI GCATC 6 cut(s) 747, 1028, 1362, 1483, 1897, 1911
BmuI ACTGGG 3 cut(s) 1274, 1541, 1823
BpiI GAAGAC 1 cut(s) 324
BplI GAGNNNNNCTC 2 cut(s) 755, 787
BpmI CTGGAG 1 cut(s) 782
Bpu10I CCTNAGC 3 cut(s) 275, 1128, 1134
Bpu1102I GCTNAGC 3 cut(s) 1034, 1884, 2085
BpuEI CTTGAG 1 cut(s) 281
BpuMI CCSGG 1 cut(s) 53
Bsa29I ATCGAT 1 cut(s) 470
BsaAI YACGTR 1 cut(s) 835
BsaHI GRCGYC 3 cut(s) 657, 1121, 2033
BsaI GGTCTC 1 cut(s) 602
BsaJI CCNNGG 1 cut(s) 1516
BsaWI WCCGGW 1 cut(s) 644
BsaXI ACNNNNNCTCC 8 cut(s) 245, 275, 722, 752, 1141, 1171, 1840, 1870
Bsc4I CCNNNNNNNGG 9 cut(s) 17, 96, 123, 680, 1522, 1814, 1827, 1828, 1955
Bse1I ACTGG 7 cut(s) 518, 1100, 1280, 1547, 1676, 1818, 1968
BseBI CCWGG 3 cut(s) 1309, 1518, 1648
BseCI ATCGAT 1 cut(s) 470
BseDI CCNNGG 1 cut(s) 1516
BseGI GGATG 6 cut(s) 108, 924, 1019, 1503, 1585, 1927
BseLI CCNNNNNNNGG 9 cut(s) 17, 96, 123, 680, 1522, 1814, 1827, 1828, 1955
BseNI ACTGG 7 cut(s) 518, 1100, 1280, 1547, 1676, 1818, 1968
BseRI GAGGAG 7 cut(s) 58, 263, 760, 984, 1116, 1149, 1750
BseSI GKGCMC 3 cut(s) 23, 480, 1822
BseX3I CGGCCG 2 cut(s) 280, 1941
BseYI CCCAGC 4 cut(s) 311, 592, 1560, 1590
BsgI GTGCAG 2 cut(s) 160, 899
Bsh1236I CGCG 4 cut(s) 527, 977, 1028, 1062
Bsh1285I CGRYCG 3 cut(s) 226, 283, 1944
BshFI GGCC 9 cut(s) 21, 153, 282, 392, 478, 942, 1043, 1943, 1961
BshNI GGYRCC 2 cut(s) 1817, 2032
BshVI ATCGAT 1 cut(s) 470
BsiEI CGRYCG 3 cut(s) 226, 283, 1944
BsiHKAI GWGCWC 1 cut(s) 1040
BsiHKCI CYCGRG 1 cut(s) 455
BsiSI CCGG 4 cut(s) 53, 645, 1316, 2072
BslFI GGGAC 7 cut(s) 43, 113, 146, 728, 1511, 1859, 1918
BslI CCNNNNNNNGG 9 cut(s) 17, 96, 123, 680, 1522, 1814, 1827, 1828, 1955
BsmAI GTCTC 6 cut(s) 437, 602, 648, 1170, 1254, 2083
BsmBI CGTCTC 2 cut(s) 437, 648
BsmFI GGGAC 7 cut(s) 43, 113, 146, 728, 1511, 1859, 1918
BsmI GAATGC 1 cut(s) 694
BsnI GGCC 9 cut(s) 21, 153, 282, 392, 478, 942, 1043, 1943, 1961
Bso31I GGTCTC 1 cut(s) 602
BsoBI CYCGRG 1 cut(s) 455
Bsp120I GGGCCC 2 cut(s) 19, 476
Bsp1286I GDGCHC 4 cut(s) 23, 480, 1040, 1822
Bsp1407I TGTACA 1 cut(s) 1833
Bsp1720I GCTNAGC 3 cut(s) 1034, 1884, 2085
BspANI GGCC 9 cut(s) 21, 153, 282, 392, 478, 942, 1043, 1943, 1961
BspDI ATCGAT 1 cut(s) 470
BspFNI CGCG 4 cut(s) 527, 977, 1028, 1062
BspPI GGATC 6 cut(s) 98, 891, 1077, 1325, 1346, 1988
BspQI GCTCTTC 1 cut(s) 897
BspT107I GGYRCC 2 cut(s) 1817, 2032
BspTNI GGTCTC 1 cut(s) 602
BsrBI CCGCTC 2 cut(s) 1709, 1728
BsrGI TGTACA 1 cut(s) 1833
BsrI ACTGG 7 cut(s) 518, 1100, 1280, 1547, 1676, 1818, 1968
BssECI CCNNGG 1 cut(s) 1516
BssNI GRCGYC 3 cut(s) 657, 1121, 2033
Bst2UI CCWGG 3 cut(s) 1309, 1518, 1648
Bst4CI ACNGT 1 cut(s) 925
Bst6I CTCTTC 4 cut(s) 446, 778, 897, 1768
BstACI GRCGYC 3 cut(s) 657, 1121, 2033
BstAUI TGTACA 1 cut(s) 1833
BstBAI YACGTR 1 cut(s) 835
BstC8I GCNNGC 5 cut(s) 19, 23, 590, 807, 1644
BstF5I GGATG 6 cut(s) 108, 924, 1019, 1503, 1585, 1927
BstFNI CGCG 4 cut(s) 527, 977, 1028, 1062
BstH2I RGCGCY 2 cut(s) 408, 2036
BstHHI GCGC 7 cut(s) 407, 529, 1030, 1097, 1771, 2008, 2035
BstMAI GTCTC 6 cut(s) 437, 602, 648, 1170, 1254, 2083
BstMCI CGRYCG 3 cut(s) 226, 283, 1944
BstNI CCWGG 3 cut(s) 1309, 1518, 1648
BstNSI RCATGY 1 cut(s) 1642
BstSCI CCNGG 4 cut(s) 51, 1307, 1516, 1646
BstSLI GKGCMC 3 cut(s) 23, 480, 1822
BstUI CGCG 4 cut(s) 527, 977, 1028, 1062
BstV2I GAAGAC 1 cut(s) 324
BstXI CCANNNNNNTGG 1 cut(s) 637
BstZI CGGCCG 2 cut(s) 280, 1941
Bsu15I ATCGAT 1 cut(s) 470
BsuRI GGCC 9 cut(s) 21, 153, 282, 392, 478, 942, 1043, 1943, 1961
BsuTUI ATCGAT 1 cut(s) 470
BtgZI GCGATG 2 cut(s) 786, 972
BtrI CACGTC 1 cut(s) 789
BtsCI GGATG 6 cut(s) 108, 924, 1019, 1503, 1585, 1927
Cac8I GCNNGC 5 cut(s) 19, 23, 590, 807, 1644
CaiI CAGNNNCTG 4 cut(s) 674, 1153, 1214, 2029
CfoI GCGC 7 cut(s) 407, 529, 1030, 1097, 1771, 2008, 2035
ClaI ATCGAT 1 cut(s) 470
CseI GACGC 2 cut(s) 1129, 2074
Csp6I GTAC 6 cut(s) 301, 379, 1399, 1540, 1834, 2053
CviAII CATG 8 cut(s) 96, 136, 367, 1246, 1639, 1753, 2003, 2062
CviQI GTAC 6 cut(s) 301, 379, 1399, 1540, 1834, 2053
DinI GGCGCC 1 cut(s) 2034
EaeI YGGCCR 5 cut(s) 151, 280, 390, 1041, 1941
EagI CGGCCG 2 cut(s) 280, 1941
Eam1104I CTCTTC 4 cut(s) 446, 778, 897, 1768
EarI CTCTTC 4 cut(s) 446, 778, 897, 1768
EciI GGCGGA 7 cut(s) 119, 562, 717, 870, 1012, 1545, 1848
EclXI CGGCCG 2 cut(s) 280, 1941
Eco24I GRGCYC 2 cut(s) 23, 480
Eco31I GGTCTC 1 cut(s) 602
Eco47I GGWCC 6 cut(s) 4, 355, 783, 829, 979, 1525
Eco52I CGGCCG 2 cut(s) 280, 1941
Eco57I CTGAAG 3 cut(s) 470, 651, 1124
Eco72I CACGTG 1 cut(s) 835
Eco88I CYCGRG 1 cut(s) 455
EcoO109I RGGNCCY 2 cut(s) 355, 476
EcoRII CCWGG 3 cut(s) 1307, 1516, 1646
EcoT38I GRGCYC 2 cut(s) 23, 480
EgeI GGCGCC 1 cut(s) 2034
EheI GGCGCC 1 cut(s) 2034
Esp3I CGTCTC 2 cut(s) 437, 648
FaeI CATG 8 cut(s) 99, 139, 370, 1249, 1642, 1756, 2006, 2065
FaqI GGGAC 7 cut(s) 43, 113, 146, 728, 1511, 1859, 1918
FatI CATG 8 cut(s) 95, 135, 366, 1245, 1638, 1752, 2002, 2061
FauI CCCGC 6 cut(s) 10, 30, 89, 173, 614, 1733
FbaI TGATCA 1 cut(s) 1597
FblI GTMKAC 1 cut(s) 222
FokI GGATG 6 cut(s) 95, 931, 1006, 1490, 1572, 1914
FriOI GRGCYC 2 cut(s) 23, 480
FspBI CTAG 4 cut(s) 62, 1182, 1325, 1865
GlaI GCGC 7 cut(s) 406, 528, 1029, 1096, 1770, 2007, 2034
GsaI CCCAGC 4 cut(s) 315, 596, 1564, 1594
GsuI CTGGAG 1 cut(s) 782
HaeII RGCGCY 2 cut(s) 408, 2036
HaeIII GGCC 9 cut(s) 21, 153, 282, 392, 478, 942, 1043, 1943, 1961
HapII CCGG 4 cut(s) 53, 645, 1316, 2072
HgaI GACGC 2 cut(s) 1129, 2074
HhaI GCGC 7 cut(s) 407, 529, 1030, 1097, 1771, 2008, 2035
Hin1I GRCGYC 3 cut(s) 657, 1121, 2033
Hin1II CATG 8 cut(s) 99, 139, 370, 1249, 1642, 1756, 2006, 2065
Hin6I GCGC 7 cut(s) 405, 527, 1028, 1095, 1769, 2006, 2033
HinP1I GCGC 7 cut(s) 405, 527, 1028, 1095, 1769, 2006, 2033
HincII GTYRAC 1 cut(s) 223
HindII GTYRAC 1 cut(s) 223
HpaII CCGG 4 cut(s) 53, 645, 1316, 2072
HphI GGTGA 2 cut(s) 283, 334
Hpy166II GTNNAC 6 cut(s) 223, 736, 786, 832, 1387, 1834
Hpy188III TCNNGA 7 cut(s) 485, 520, 599, 651, 1193, 1274, 1388
Hpy8I GTNNAC 6 cut(s) 223, 736, 786, 832, 1387, 1834
HpyAV CCTTC 4 cut(s) 298, 1728, 1959, 2055
HpyCH4III ACNGT 1 cut(s) 925
HpyCH4IV ACGT 6 cut(s) 192, 657, 732, 788, 834, 1401
HpyCH4V TGCA 7 cut(s) 31, 141, 880, 1301, 1375, 1408, 1924
HpySE526I ACGT 6 cut(s) 192, 657, 732, 788, 834, 1401
Hsp92I GRCGYC 3 cut(s) 657, 1121, 2033
Hsp92II CATG 8 cut(s) 99, 139, 370, 1249, 1642, 1756, 2006, 2065
HspAI GCGC 7 cut(s) 405, 527, 1028, 1095, 1769, 2006, 2033
KasI GGCGCC 1 cut(s) 2032
Ksp22I TGATCA 1 cut(s) 1597
LguI GCTCTTC 1 cut(s) 897
LmnI GCTCC 6 cut(s) 83, 132, 312, 1714, 1733, 1861
LweI GCATC 6 cut(s) 747, 1028, 1362, 1483, 1897, 1911
MaeI CTAG 4 cut(s) 62, 1182, 1325, 1865
MaeII ACGT 6 cut(s) 192, 657, 732, 788, 834, 1401
MaeIII GTNAC 2 cut(s) 340, 1223
MbiI CCGCTC 2 cut(s) 1709, 1728
MboII GAAGA 8 cut(s) 329, 433, 765, 851, 901, 914, 1755, 1944
MfeI CAATTG 1 cut(s) 583
MhlI GDGCHC 4 cut(s) 23, 480, 1040, 1822
MluCI AATT 7 cut(s) 583, 634, 1266, 1337, 1415, 1478, 1797
Mly113I GGCGCC 1 cut(s) 2033
MlyI GAGTC 9 cut(s) 59, 65, 86, 262, 467, 548, 563, 635, 1144
MmeI TCCRAC 2 cut(s) 276, 591
MseI TTAA 2 cut(s) 332, 1340
MslI CAYNNNNRTG 1 cut(s) 1919
MspA1I CMGCKG 5 cut(s) 17, 28, 279, 402, 1033
MspI CCGG 4 cut(s) 53, 645, 1316, 2072
MspR9I CCNGG 4 cut(s) 53, 1309, 1518, 1648
MunI CAATTG 1 cut(s) 583
Mva1269I GAATGC 1 cut(s) 694
MvaI CCWGG 3 cut(s) 1309, 1518, 1648
MvnI CGCG 4 cut(s) 527, 977, 1028, 1062
NarI GGCGCC 1 cut(s) 2033
NciI CCSGG 1 cut(s) 53
NlaIII CATG 8 cut(s) 99, 139, 370, 1249, 1642, 1756, 2006, 2065
NmuCI GTSAC 2 cut(s) 340, 1223
NspI RCATGY 1 cut(s) 1642
PciSI GCTCTTC 1 cut(s) 897
PcsI WCGNNNNNNNCGW 7 cut(s) 198, 219, 357, 378, 467, 729, 738
PctI GAATGC 1 cut(s) 694
PleI GAGTC 9 cut(s) 59, 64, 86, 262, 466, 547, 563, 635, 1144
PluTI GGCGCC 1 cut(s) 2036
PmaCI CACGTG 1 cut(s) 835
PmlI CACGTG 1 cut(s) 835
PpsI GAGTC 9 cut(s) 59, 64, 86, 262, 466, 547, 563, 635, 1144
Ppu21I YACGTR 1 cut(s) 835
PpuMI RGGWCCY 1 cut(s) 355
Psp5II RGGWCCY 1 cut(s) 355
Psp6I CCWGG 3 cut(s) 1307, 1516, 1646
PspCI CACGTG 1 cut(s) 835
PspFI CCCAGC 4 cut(s) 311, 592, 1560, 1590
PspGI CCWGG 3 cut(s) 1307, 1516, 1646
PspOMI GGGCCC 2 cut(s) 19, 476
PspPPI RGGWCCY 1 cut(s) 355
PstNI CAGNNNCTG 4 cut(s) 674, 1153, 1214, 2029
RsaI GTAC 6 cut(s) 302, 380, 1400, 1541, 1835, 2054
RsaNI GTAC 6 cut(s) 301, 379, 1399, 1540, 1834, 2053
RseI CAYNNNNRTG 1 cut(s) 1919
SalI GTCGAC 1 cut(s) 221
SapI GCTCTTC 1 cut(s) 897
SaqAI TTAA 2 cut(s) 332, 1340
SchI GAGTC 9 cut(s) 59, 65, 86, 262, 467, 548, 563, 635, 1144
ScrFI CCNGG 4 cut(s) 53, 1309, 1518, 1648
SduI GDGCHC 4 cut(s) 23, 480, 1040, 1822
SfaNI GCATC 6 cut(s) 747, 1028, 1362, 1483, 1897, 1911
SfoI GGCGCC 1 cut(s) 2034
SinI GGWCC 6 cut(s) 4, 355, 783, 829, 979, 1525
SmiMI CAYNNNNRTG 1 cut(s) 1919
SmlI CTYRAG 1 cut(s) 296
SmoI CTYRAG 1 cut(s) 296
Sse9I AATT 7 cut(s) 583, 634, 1266, 1337, 1415, 1478, 1797
SspDI GGCGCC 1 cut(s) 2032
SspMI CTAG 4 cut(s) 62, 1182, 1325, 1865
StyD4I CCNGG 4 cut(s) 51, 1307, 1516, 1646
TaaI ACNGT 1 cut(s) 925
TaiI ACGT 6 cut(s) 195, 660, 735, 791, 837, 1404
TaqII GACCGA 1 cut(s) 1513
TasI AATT 7 cut(s) 583, 634, 1266, 1337, 1415, 1478, 1797
TatI WGTACW 1 cut(s) 1833
Tru1I TTAA 2 cut(s) 332, 1340
Tru9I TTAA 2 cut(s) 332, 1340
TseFI GTSAC 2 cut(s) 340, 1223
Tsp45I GTSAC 2 cut(s) 340, 1223
TspDTI ATGAA 2 cut(s) 975, 1995
TspGWI ACGGA 4 cut(s) 328, 419, 730, 1920
VpaK11BI GGWCC 6 cut(s) 4, 355, 783, 829, 979, 1525
XceI RCATGY 1 cut(s) 1642
XcmI CCANNNNNNNNNTGG 3 cut(s) 839, 1012, 1810
XmiI GTMKAC 1 cut(s) 222
XspI CTAG 4 cut(s) 62, 1182, 1325, 1865
ZraI GACGTC 1 cut(s) 658
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.