pycom13g03050

PB1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0011786
Physical Location & Seq
Forward (+)
2079868 .. 2081797
1930 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g03050.3

Sequence Viewer

Length: 1602 bp
ATGGACCCATCACCAGCGGCGCCCCCGCTGCAATCCCACCACCTCAACTACGCCGACTCCCTCGACTCTTCCCCTCGCTCCCGCAACACCGACTCATGGGACGAGCCTCAACCCCCCTCCACCAGGCTCCGCCTTATGTGCAGCTACGGCGGCCACATCGTCCCCCGCCCCCACGACAAGTCGCTATGCTACGTCGGAGGCGACACCCGAATCGTCGTCGTCGACCGCCAGACCTCCCTCTCCGACCTTTCCGACCGTCTCTCCAAGACTCTCCTCAACGGCCGACCCTTCACCCTCAAGTACCAGCTCCCCAGCGAGGACCTCGACTCCTTAATCTCCCTGACCACCGACGAGGACCTCGACAACATGATCGACGAGTACGACCGCACGGCCAACCACAGCGGCGCTTCGTCCAAACCCTCGCGACTCCGTCTCTTTCTCTTCCCCCTGAAGCCCGAGTCGTCGCAATCGATGGGGCCCATTCTCGATATTTCAGCCAATAAGTCCGAGGACTGGTTCTTGAACGCGCTCAATGGCGCGTCCGGTATGCTCAATCGGGGCTTCTCCGACTCCGCCTCCGTCAACTGCTTGCTGGGTCTCGACGACGATTCGATTTCCGGCGGTGCTGCCAATAATTTGGACTCCGGTTCGAGAGACGTCGAGGTTTCGGTTCCTGCGAATGGCAAGAATGCCAAACAGGGCGGAGGTGCCGGCGGTGGGAACGGGCAGGACGTTCAATCTGTCCCCGATTCGCCGATGCTTGAGAACTCCTCATCGTTTGGGTCCACGTCATCGTCGCCATTGCTTGCGAACTTGCCGCCGATTCGGGTCCACGTGGAAGATGGCGGCGGCGGTGGAGGTGGAGGCGGGATTGGAGTGCAGGATCAGAAGATGGGGATTGAAGAGCAGTTTGCTCAGATGACTGTTGGTGGTGGTGTTGGGCAGAAGCCAGACGACGGTGCTTTCGCGGTCCTTTCATCGCCTCCTCAGATGCCCACTACCATCGTGGCATCCGCCGCGCAGCTGAGCACGGCCACCAATTACTTGAATCGCGTAGTTTCGGACGATGAGCGATCCGATCACGGCGCCCCAGCTGGTTACCGGAAACCAGCGCCACCGCAGCCTCAGCTTCAGCCACTGACTCTGCCTCCTCAGTCTCAGCAGCCCAAATCTAGTGGCGTTATTGATTTGCCCTCCCCAGATTCAGTTTCAAGTGACAATAGTTTATCAAATGCCATGTCTCGCCCAAAACCTGTAATTTATCAAGACCCAGTAGTTCAAATCCCCTCTGCAAACGCCAGGTTTCCGGCAAACCTCGTTGATCCGAAATTAAGTCTTTCCGATCCAACCACTCGGATTCAGATGCAACAACAGGTACACGATTCTGGGTACGTTTTGCAATCGCAATTCGATCATCATCAGCAGCAGCAGCAGCAACACACAACAGCAACACCACCAACAAGAAGCACAGCAGCCACATCAATTTATACACGCTGGAACACATTACATCCAGCACCACCCAGGTTCGGTCCCCATTCCGGCGTACTACCCGGTGTATCCGCCCCAGCAGCAACAGCACCACCATCATCATCCCCAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PB1

Protein Analysis

534

Amino Acids

56.28

Weight (kDa)

5.18

Isoelectric Point (pI)

65.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011786)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G01190
fragaria_vesca FvH4_4g26650 FvH4_4g26650 FvH4_4g26650
malus_domestica MD13G1034900.v1.1 MD16G1036800.v1.1
prunus_persica Prupe.1G317300_v2.0.a1
pyrus_communis pycom13g03050 pycom16g03170
rosa_chinensis RchiOBHm_Chr4g0434361
rosa_laevigata RLG00000006680
rosa_multiflora Rmu_sc0016328.1_g000003
rosa_roxburghii Rroxscaffold_5G00375720
rosa_rugosa Rorug04G0276300
rosa_samantha Rh4AG331400 Rh4BG339300 Rh4CG354400 Rh4DG334400
rosa_wichuraiana Rw4G028740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 660
AccB1I GGYRCC 3 cut(s) 19, 707, 1085
AccI GTMKAC 1 cut(s) 222
AccII CGCG 6 cut(s) 424, 527, 539, 968, 1019, 1053
AclWI GGATC 4 cut(s) 891, 1068, 1316, 1337
AcoI YGGCCR 4 cut(s) 151, 280, 390, 1032
AcuI CTGAAG 2 cut(s) 470, 1115
AcvI CACGTG 1 cut(s) 835
AcyI GRCGYC 3 cut(s) 20, 657, 1086
AfaI GTAC 5 cut(s) 302, 380, 1377, 1391, 1545
AfiI CCNNNNNNNGG 9 cut(s) 96, 123, 316, 513, 680, 717, 956, 1526, 1538
AgsI TTSAA 6 cut(s) 523, 737, 902, 1048, 1212, 1280
AjiI CACGTC 1 cut(s) 789
AjnI CCWGG 3 cut(s) 122, 1298, 1520
AluBI AGCT 6 cut(s) 144, 307, 1024, 1094, 1129, 1598
AluI AGCT 6 cut(s) 144, 307, 1024, 1094, 1129, 1598
Alw21I GWGCWC 1 cut(s) 1031
Alw26I GTCTC 6 cut(s) 263, 437, 602, 648, 1161, 1245
AlwI GGATC 4 cut(s) 891, 1068, 1316, 1337
AlwNI CAGNNNCTG 1 cut(s) 1138
Ama87I CYCGRG 1 cut(s) 455
AoxI GGCC 5 cut(s) 151, 280, 390, 476, 1032
ApaI GGGCCC 1 cut(s) 480
ArsI GACNNNNNNTTYG 4 cut(s) 947, 979, 1223, 1255
AspLEI GCGC 7 cut(s) 22, 407, 529, 539, 1021, 1088, 1114
AspS9I GGNCC 9 cut(s) 4, 319, 355, 476, 477, 783, 829, 970, 1529
AsuC2I CCSGG 1 cut(s) 1551
AsuHPI GGTGA 2 cut(s) 3, 283
AvaI CYCGRG 1 cut(s) 455
AvaII GGWCC 7 cut(s) 4, 319, 355, 783, 829, 970, 1529
BaeGI GKGCMC 1 cut(s) 480
BanI GGYRCC 3 cut(s) 19, 707, 1085
BanII GRGCYC 1 cut(s) 480
BbrPI CACGTG 1 cut(s) 835
Bbv12I GWGCWC 1 cut(s) 1031
BbvCI CCTCAGC 1 cut(s) 1125
BccI CCATC 6 cut(s) 16, 466, 836, 886, 1010, 1591
BceAI ACGGC 5 cut(s) 163, 295, 405, 1047, 1099
BciT130I CCWGG 3 cut(s) 124, 1300, 1522
BciVI GTATCC 1 cut(s) 1567
BcnI CCSGG 1 cut(s) 1551
BcoDI GTCTC 6 cut(s) 263, 437, 602, 648, 1161, 1245
BfaI CTAG 1 cut(s) 1173
BfoI RGCGCY 4 cut(s) 23, 408, 1089, 1115
BfuI GTATCC 1 cut(s) 1567
BlpI GCTNAGC 1 cut(s) 1025
Bme1390I CCNGG 4 cut(s) 124, 1300, 1522, 1551
Bme18I GGWCC 7 cut(s) 4, 319, 355, 783, 829, 970, 1529
BmeT110I CYCGRG 1 cut(s) 455
BmgBI CACGTC 1 cut(s) 789
BmgT120I GGNCC 9 cut(s) 4, 319, 355, 476, 477, 783, 829, 970, 1529
BmrFI CCNGG 4 cut(s) 124, 1300, 1522, 1551
BmrI ACTGGG 1 cut(s) 1265
BmsI GCATC 4 cut(s) 747, 981, 1019, 1353
BmuI ACTGGG 1 cut(s) 1265
BplI GAGNNNNNCTC 2 cut(s) 755, 787
Bpu10I CCTNAGC 1 cut(s) 1125
Bpu1102I GCTNAGC 1 cut(s) 1025
BpuEI CTTGAG 2 cut(s) 281, 782
BpuMI CCSGG 1 cut(s) 1551
Bsa29I ATCGAT 1 cut(s) 470
BsaAI YACGTR 1 cut(s) 835
BsaBI GATNNNNATC 1 cut(s) 1416
BsaHI GRCGYC 3 cut(s) 20, 657, 1086
BsaI GGTCTC 1 cut(s) 602
BsaJI CCNNGG 2 cut(s) 507, 1520
BsaWI WCCGGW 3 cut(s) 542, 644, 1101
Bsc4I CCNNNNNNNGG 9 cut(s) 96, 123, 316, 513, 680, 717, 956, 1526, 1538
Bse118I RCCGGY 1 cut(s) 710
Bse1I ACTGG 2 cut(s) 518, 1271
Bse3DI GCAATG 1 cut(s) 800
Bse8I GATNNNNATC 1 cut(s) 1416
BseBI CCWGG 3 cut(s) 124, 1300, 1522
BseCI ATCGAT 1 cut(s) 470
BseDI CCNNGG 2 cut(s) 507, 1520
BseGI GGATG 3 cut(s) 1010, 1507, 1589
BseJI GATNNNNATC 1 cut(s) 1416
BseLI CCNNNNNNNGG 9 cut(s) 96, 123, 316, 513, 680, 717, 956, 1526, 1538
BseMI GCAATG 1 cut(s) 800
BseMII CTCAG 6 cut(s) 929, 1001, 1016, 1139, 1166, 1172
BseNI ACTGG 2 cut(s) 518, 1271
BseRI GAGGAG 4 cut(s) 263, 760, 975, 1140
BseSI GKGCMC 1 cut(s) 480
BseX3I CGGCCG 1 cut(s) 280
BseYI CCCAGC 5 cut(s) 311, 592, 1090, 1564, 1594
BsgI GTGCAG 2 cut(s) 160, 899
Bsh1236I CGCG 6 cut(s) 424, 527, 539, 968, 1019, 1053
Bsh1285I CGRYCG 4 cut(s) 226, 256, 283, 385
BshFI GGCC 5 cut(s) 153, 282, 392, 478, 1034
BshNI GGYRCC 3 cut(s) 19, 707, 1085
BshVI ATCGAT 1 cut(s) 470
BsiEI CGRYCG 4 cut(s) 226, 256, 283, 385
BsiHKAI GWGCWC 1 cut(s) 1031
BsiHKCI CYCGRG 1 cut(s) 455
BsiSI CCGG 8 cut(s) 543, 618, 645, 711, 1102, 1307, 1539, 1551
BslFI GGGAC 4 cut(s) 113, 146, 728, 1515
BslI CCNNNNNNNGG 9 cut(s) 96, 123, 316, 513, 680, 717, 956, 1526, 1538
BsmAI GTCTC 6 cut(s) 263, 437, 602, 648, 1161, 1245
BsmBI CGTCTC 3 cut(s) 263, 437, 648
BsmFI GGGAC 4 cut(s) 113, 146, 728, 1515
BsmI GAATGC 1 cut(s) 694
BsnI GGCC 5 cut(s) 153, 282, 392, 478, 1034
Bso31I GGTCTC 1 cut(s) 602
BsoBI CYCGRG 1 cut(s) 455
Bsp120I GGGCCC 1 cut(s) 476
Bsp1286I GDGCHC 2 cut(s) 480, 1031
Bsp143I GATC 7 cut(s) 369, 883, 1073, 1078, 1321, 1342, 1411
Bsp1720I GCTNAGC 1 cut(s) 1025
Bsp68I TCGCGA 1 cut(s) 424
BspANI GGCC 5 cut(s) 153, 282, 392, 478, 1034
BspCNI CTCAG 6 cut(s) 928, 1000, 1017, 1138, 1165, 1171
BspDI ATCGAT 1 cut(s) 470
BspFNI CGCG 6 cut(s) 424, 527, 539, 968, 1019, 1053
BspPI GGATC 4 cut(s) 891, 1068, 1316, 1337
BspQI GCTCTTC 1 cut(s) 897
BspT107I GGYRCC 3 cut(s) 19, 707, 1085
BspTNI GGTCTC 1 cut(s) 602
BsrDI GCAATG 1 cut(s) 800
BsrFI RCCGGY 1 cut(s) 710
BsrI ACTGG 2 cut(s) 518, 1271
BssAI RCCGGY 1 cut(s) 710
BssECI CCNNGG 2 cut(s) 507, 1520
BssMI GATC 7 cut(s) 369, 883, 1073, 1078, 1321, 1342, 1411
BssNI GRCGYC 3 cut(s) 20, 657, 1086
Bst2UI CCWGG 3 cut(s) 124, 1300, 1522
Bst4CI ACNGT 3 cut(s) 257, 925, 959
Bst6I CTCTTC 3 cut(s) 73, 446, 897
BstACI GRCGYC 3 cut(s) 20, 657, 1086
BstBAI YACGTR 1 cut(s) 835
BstC8I GCNNGC 3 cut(s) 590, 712, 807
BstDEI CTNAG 6 cut(s) 915, 987, 1025, 1125, 1152, 1158
BstEII GGTNACC 1 cut(s) 1097
BstENI CCTNNNNNAGG 1 cut(s) 121
BstF5I GGATG 3 cut(s) 1010, 1507, 1589
BstFNI CGCG 6 cut(s) 424, 527, 539, 968, 1019, 1053
BstH2I RGCGCY 4 cut(s) 23, 408, 1089, 1115
BstHHI GCGC 7 cut(s) 22, 407, 529, 539, 1021, 1088, 1114
BstKTI GATC 7 cut(s) 372, 886, 1076, 1081, 1324, 1345, 1414
BstMAI GTCTC 6 cut(s) 263, 437, 602, 648, 1161, 1245
BstMBI GATC 7 cut(s) 369, 883, 1073, 1078, 1321, 1342, 1411
BstMCI CGRYCG 4 cut(s) 226, 256, 283, 385
BstNI CCWGG 3 cut(s) 124, 1300, 1522
BstPI GGTNACC 1 cut(s) 1097
BstSCI CCNGG 4 cut(s) 122, 1298, 1520, 1549
BstSLI GKGCMC 1 cut(s) 480
BstUI CGCG 6 cut(s) 424, 527, 539, 968, 1019, 1053
BstXI CCANNNNNNTGG 1 cut(s) 637
BstZI CGGCCG 1 cut(s) 280
Bsu15I ATCGAT 1 cut(s) 470
BsuI GTATCC 1 cut(s) 1567
BsuRI GGCC 5 cut(s) 153, 282, 392, 478, 1034
BsuTUI ATCGAT 1 cut(s) 470
BtgZI GCGATG 1 cut(s) 963
BtrI CACGTC 1 cut(s) 789
BtsCI GGATG 3 cut(s) 1010, 1507, 1589
BtsIMutI CAGTG 1 cut(s) 1136
BtuMI TCGCGA 1 cut(s) 424
Cac8I GCNNGC 3 cut(s) 590, 712, 807
CaiI CAGNNNCTG 1 cut(s) 1138
CfoI GCGC 7 cut(s) 22, 407, 529, 539, 1021, 1088, 1114
Cfr10I RCCGGY 1 cut(s) 710
Cfr13I GGNCC 9 cut(s) 4, 319, 355, 476, 477, 783, 829, 970, 1529
ClaI ATCGAT 1 cut(s) 470
CseI GACGC 1 cut(s) 528
Csp6I GTAC 5 cut(s) 301, 379, 1376, 1390, 1544
CspCI CAANNNNNGTGG 2 cut(s) 1156, 1191
CviAII CATG 3 cut(s) 96, 367, 1237
CviQI GTAC 5 cut(s) 301, 379, 1376, 1390, 1544
DdeI CTNAG 6 cut(s) 915, 987, 1025, 1125, 1152, 1158
DinI GGCGCC 2 cut(s) 21, 1087
DpnI GATC 7 cut(s) 371, 885, 1075, 1080, 1323, 1344, 1413
DpnII GATC 7 cut(s) 369, 883, 1073, 1078, 1321, 1342, 1411
EaeI YGGCCR 4 cut(s) 151, 280, 390, 1032
EagI CGGCCG 1 cut(s) 280
Eam1104I CTCTTC 3 cut(s) 73, 446, 897
EarI CTCTTC 3 cut(s) 73, 446, 897
EciI GGCGGA 5 cut(s) 119, 562, 717, 1003, 1549
EclXI CGGCCG 1 cut(s) 280
Eco24I GRGCYC 1 cut(s) 480
Eco31I GGTCTC 1 cut(s) 602
Eco47I GGWCC 7 cut(s) 4, 319, 355, 783, 829, 970, 1529
Eco52I CGGCCG 1 cut(s) 280
Eco57I CTGAAG 2 cut(s) 470, 1115
Eco72I CACGTG 1 cut(s) 835
Eco88I CYCGRG 1 cut(s) 455
Eco91I GGTNACC 1 cut(s) 1097
EcoNI CCTNNNNNAGG 1 cut(s) 121
EcoO109I RGGNCCY 3 cut(s) 319, 355, 476
EcoO65I GGTNACC 1 cut(s) 1097
EcoRII CCWGG 3 cut(s) 122, 1298, 1520
EcoT38I GRGCYC 1 cut(s) 480
EgeI GGCGCC 2 cut(s) 21, 1087
EheI GGCGCC 2 cut(s) 21, 1087
Esp3I CGTCTC 3 cut(s) 263, 437, 648
FaeI CATG 3 cut(s) 99, 370, 1240
FaiI YATR 7 cut(s) 97, 137, 187, 368, 548, 1238, 1488
FaqI GGGAC 4 cut(s) 113, 146, 728, 1515
FatI CATG 3 cut(s) 95, 366, 1236
FauI CCCGC 4 cut(s) 33, 89, 173, 860
FblI GTMKAC 1 cut(s) 222
FokI GGATG 3 cut(s) 997, 1494, 1576
FriOI GRGCYC 1 cut(s) 480
FspBI CTAG 1 cut(s) 1173
GlaI GCGC 7 cut(s) 21, 406, 528, 538, 1020, 1087, 1113
GsaI CCCAGC 5 cut(s) 315, 596, 1094, 1568, 1598
HaeII RGCGCY 4 cut(s) 23, 408, 1089, 1115
HaeIII GGCC 5 cut(s) 153, 282, 392, 478, 1034
HapII CCGG 8 cut(s) 543, 618, 645, 711, 1102, 1307, 1539, 1551
HgaI GACGC 1 cut(s) 528
HhaI GCGC 7 cut(s) 22, 407, 529, 539, 1021, 1088, 1114
Hin1I GRCGYC 3 cut(s) 20, 657, 1086
Hin1II CATG 3 cut(s) 99, 370, 1240
Hin6I GCGC 7 cut(s) 20, 405, 527, 537, 1019, 1086, 1112
HinP1I GCGC 7 cut(s) 20, 405, 527, 537, 1019, 1086, 1112
HincII GTYRAC 2 cut(s) 223, 583
HindII GTYRAC 2 cut(s) 223, 583
HpaII CCGG 8 cut(s) 543, 618, 645, 711, 1102, 1307, 1539, 1551
HphI GGTGA 2 cut(s) 3, 283
Hpy166II GTNNAC 5 cut(s) 223, 583, 786, 832, 1378
Hpy188III TCNNGA 6 cut(s) 423, 485, 520, 599, 651, 1265
Hpy8I GTNNAC 5 cut(s) 223, 583, 786, 832, 1378
HpyAV CCTTC 1 cut(s) 298
HpyCH4III ACNGT 3 cut(s) 257, 925, 959
HpyCH4IV ACGT 6 cut(s) 192, 657, 732, 788, 834, 1392
HpyCH4V TGCA 6 cut(s) 31, 141, 880, 1292, 1366, 1399
HpyF3I CTNAG 6 cut(s) 915, 987, 1025, 1125, 1152, 1158
HpySE526I ACGT 6 cut(s) 192, 657, 732, 788, 834, 1392
Hsp92I GRCGYC 3 cut(s) 20, 657, 1086
Hsp92II CATG 3 cut(s) 99, 370, 1240
HspAI GCGC 7 cut(s) 20, 405, 527, 537, 1019, 1086, 1112
KasI GGCGCC 2 cut(s) 19, 1085
KroI GCCGGC 1 cut(s) 710
KroNI GCCGGC 1 cut(s) 712
Kzo9I GATC 7 cut(s) 369, 883, 1073, 1078, 1321, 1342, 1411
LguI GCTCTTC 1 cut(s) 897
LmnI GCTCC 3 cut(s) 83, 132, 312
LweI GCATC 4 cut(s) 747, 981, 1019, 1353
MaeI CTAG 1 cut(s) 1173
MaeII ACGT 6 cut(s) 192, 657, 732, 788, 834, 1392
MaeIII GTNAC 2 cut(s) 1097, 1214
MalI GATC 7 cut(s) 371, 885, 1075, 1080, 1323, 1344, 1413
MboI GATC 7 cut(s) 369, 883, 1073, 1078, 1321, 1342, 1411
MboII GAAGA 5 cut(s) 60, 433, 851, 901, 914
MhlI GDGCHC 2 cut(s) 480, 1031
MluCI AATT 6 cut(s) 634, 1039, 1257, 1328, 1406, 1482
Mly113I GGCGCC 2 cut(s) 20, 1086
MmeI TCCRAC 5 cut(s) 175, 267, 276, 591, 1370
MroNI GCCGGC 1 cut(s) 710
MseI TTAA 2 cut(s) 332, 1331
MspA1I CMGCKG 5 cut(s) 17, 28, 402, 1024, 1094
MspI CCGG 8 cut(s) 543, 618, 645, 711, 1102, 1307, 1539, 1551
MspR9I CCNGG 4 cut(s) 124, 1300, 1522, 1551
Mva1269I GAATGC 1 cut(s) 694
MvaI CCWGG 3 cut(s) 124, 1300, 1522
MvnI CGCG 6 cut(s) 424, 527, 539, 968, 1019, 1053
NaeI GCCGGC 1 cut(s) 712
NarI GGCGCC 2 cut(s) 20, 1086
NciI CCSGG 1 cut(s) 1551
NdeII GATC 7 cut(s) 369, 883, 1073, 1078, 1321, 1342, 1411
NgoMIV GCCGGC 1 cut(s) 710
NlaIII CATG 3 cut(s) 99, 370, 1240
NmuCI GTSAC 1 cut(s) 1214
NruI TCGCGA 1 cut(s) 424
PciSI GCTCTTC 1 cut(s) 897
PcsI WCGNNNNNNNCGW 7 cut(s) 198, 219, 357, 378, 467, 674, 729
PctI GAATGC 1 cut(s) 694
PdiI GCCGGC 1 cut(s) 712
PfeI GAWTC 8 cut(s) 210, 608, 749, 823, 1048, 1202, 1357, 1382
PflFI GACNNNGTC 1 cut(s) 429
PluTI GGCGCC 2 cut(s) 23, 1089
PmaCI CACGTG 1 cut(s) 835
PmlI CACGTG 1 cut(s) 835
Ppu21I YACGTR 1 cut(s) 835
PpuMI RGGWCCY 2 cut(s) 319, 355
Psp5II RGGWCCY 2 cut(s) 319, 355
Psp6I CCWGG 3 cut(s) 122, 1298, 1520
PspCI CACGTG 1 cut(s) 835
PspEI GGTNACC 1 cut(s) 1097
PspFI CCCAGC 5 cut(s) 311, 592, 1090, 1564, 1594
PspGI CCWGG 3 cut(s) 122, 1298, 1520
PspOMI GGGCCC 1 cut(s) 476
PspPI GGNCC 9 cut(s) 4, 319, 355, 476, 477, 783, 829, 970, 1529
PspPPI RGGWCCY 2 cut(s) 319, 355
PstNI CAGNNNCTG 1 cut(s) 1138
PsyI GACNNNGTC 1 cut(s) 429
PvuII CAGCTG 2 cut(s) 1024, 1094
RruI TCGCGA 1 cut(s) 424
RsaI GTAC 5 cut(s) 302, 380, 1377, 1391, 1545
RsaNI GTAC 5 cut(s) 301, 379, 1376, 1390, 1544
SalI GTCGAC 1 cut(s) 221
SapI GCTCTTC 1 cut(s) 897
SaqAI TTAA 2 cut(s) 332, 1331
Sau3AI GATC 7 cut(s) 369, 883, 1073, 1078, 1321, 1342, 1411
Sau96I GGNCC 9 cut(s) 4, 319, 355, 476, 477, 783, 829, 970, 1529
ScrFI CCNGG 4 cut(s) 124, 1300, 1522, 1551
SduI GDGCHC 2 cut(s) 480, 1031
SfaNI GCATC 4 cut(s) 747, 981, 1019, 1353
SfoI GGCGCC 2 cut(s) 21, 1087
SinI GGWCC 7 cut(s) 4, 319, 355, 783, 829, 970, 1529
SmlI CTYRAG 2 cut(s) 296, 761
SmoI CTYRAG 2 cut(s) 296, 761
Sse9I AATT 6 cut(s) 634, 1039, 1257, 1328, 1406, 1482
SspDI GGCGCC 2 cut(s) 19, 1085
SspMI CTAG 1 cut(s) 1173
StyD4I CCNGG 4 cut(s) 122, 1298, 1520, 1549
TaaI ACNGT 3 cut(s) 257, 925, 959
TaiI ACGT 6 cut(s) 195, 660, 735, 791, 837, 1395
TaqII GACCGA 1 cut(s) 1517
TasI AATT 6 cut(s) 634, 1039, 1257, 1328, 1406, 1482
TauI GCSGC 7 cut(s) 20, 153, 405, 820, 849, 852, 1019
TfiI GAWTC 8 cut(s) 210, 608, 749, 823, 1048, 1202, 1357, 1382
Tru1I TTAA 2 cut(s) 332, 1331
Tru9I TTAA 2 cut(s) 332, 1331
TscAI CASTG 1 cut(s) 1143
TseFI GTSAC 1 cut(s) 1214
Tsp45I GTSAC 1 cut(s) 1214
TspDTI ATGAA 1 cut(s) 966
TspGWI ACGGA 2 cut(s) 419, 568
TspRI CASTG 1 cut(s) 1143
Tth111I GACNNNGTC 1 cut(s) 429
VpaK11BI GGWCC 7 cut(s) 4, 319, 355, 783, 829, 970, 1529
XagI CCTNNNNNAGG 1 cut(s) 121
XcmI CCANNNNNNNNNTGG 2 cut(s) 839, 1003
XmiI GTMKAC 1 cut(s) 222
XspI CTAG 1 cut(s) 1173
ZraI GACGTC 1 cut(s) 658
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.