Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0005916

Physical Location & Seq

Genomic Coordinates Forward (+)

4206721 .. 4211294

Gene Structure 4574 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1058800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

ATGGAGTCCTGGAGTTTTGGTTCAGAAGGGAAAGGGTTTTTGTTTCCGGAAGAAATCGATATACCAACTGATGCATTTTCAAGGAATACTAGAAAACCATTCCTGGAATTGGATGACAAAACTTGCTTTAATTTTGGCAAGGAATCAGTTGACAGGGTGGGGTTCATCGATTTGGGGTTCCCTGATAGTAACCAAGGAGTGGAAATCTTGAATGGTGTGGTTTGTAATGATTCTAGTTATAATTCTGTAGCTTCACCGAGTTGTTTGATTAGTTCAAGTTCATCTTTTGGTGAGGGGGAATCCGGGTCGAAGTTTTCAGGCCCTGTGACTGAATGTAGTAGTATGGATTCATCAATGATTGCTTTGAAGCTAGGGAGCTTGGCTGATAGCAGAGGTGGGCAGAATATTCAGCATTCGATTTCTACAGAGAGGTCGAAAAAAGCTGGCAATGGCACGAGGAGTTCGTACTATCCCGCTCCCACCTGCCAAGTCCATGGGTGTAACATGGATCTTACCTTCTCAAAGGATTACCACAAGAGGCATAGGGTTTGTGATGCTCACTCCAAGACTGCCGTAGTGATTGTTAATGGAATCGAACAGCGGTTTTGCCAGCAGTGCAGCAGGTTTCATCTTCTTGCTGAATTTGATGATGTGAAGCGCAGTTGTCGTAAGCGCCTAGCTGGCCACAACCTTCGCCGAAGGAAGCCTCTACTAGATACCCTCGATTGTAAACCGCATAAGTTGATCCGGACATGTCAAGGAAACGGGTATATGGGAAGTTCCTTCCCGAAGGGAACACCCTTTGGTTTTTCGGATATACTTCCAGATGGCTGCATTCTGCATCCAGAATATGAACAAGCTAAGCAATATGGAAATGTCAAATCTGAAGACAGGTCAACCTACGGTCAGTCTGTAACACCTATACCAAACAGGCAGTTTATTCCAAAATCATTCCACCATCTGCCTGGCCTTGGCGAACAGTTTGCTCCAGGAACTCCCTTGTCAGGAAATGAATACTCTGTCTTTGATACAGCATCAAATGCTCAGAAAGCATTTGGGGCTTCAAACTCCAGCTGTGCTCTCTCTCTTCTGTCAGCTCAATCGCATAACTTATCAAGCCATTCAGCCGGAGTTCAAGTGCCTAACCCCCTGGTCAATCAAAGAGCCCATCACTGTTATGGTCAACTTAATGAAAAGACTTCGAGGGTAAACTCCATGGAAAATTGTGGACGAAACAGGTCCTACCCGTTTAGTAAGAAATCTATGGGAGCCAACCACATGGAATCAGTAAACATTTCTGATTCTAGTCATGCTGCTGACTTCCAACTTCACACAGACAGAGCTTATCATGTGTCAGATTGCTTGAGTGCCAAGTATTGTGTTTCTCCTGAACGCGGAACAACTTTTGATTTGCTGCAATTGTCATCACACCTTCAGAGAGTGGAGCATGAGAGGAACTTTCTCCAAGTAAAGCAGGAAAATGGAAAATTCTACTGTTTCCCGACAGGCATGCAAGCAACAATGTTGCTGGAGGCAGTTTGGATCTTCAGCATCAGAATTCCAACATTTCCACAGAGGCTGGGAGAAACTTTAGATACCAGTGGTAGCAACACTCTATTCCGAAAGGAAAATATAGCTATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042742 GO:0043207 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0098542 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SBP

Protein Analysis

548

Amino Acids

60.49

Weight (kDa)

8.03

Isoelectric Point (pI)

46.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SBP	PF03110	162 - 235	4.5e-31	SBP domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005916)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g29640
malus_domestica	MD13G1059500.v1.1 MD16G1058800.v1.1
prunus_persica	Prupe.1G290200_v2.0.a1 Prupe.1G290200_v2.0.a1 Prupe.1G290200_v2.0.a1 Prupe.1G290200_v2.0.a1 Prupe.1G290200_v2.0.a1 Prupe.1G290200_v2.0.a1 Prupe.1G290200_v2.0.a1
pyrus_communis	pycom13g05300 pycom16g05140
rosa_chinensis	RchiOBHm_Chr4g0437871
rosa_laevigata	RLG00000006405
rosa_multiflora	Rmu_sc0008907.1_g000005
rosa_roxburghii	Rroxscaffold_5G00379060
rosa_rugosa	Rorug04G0304800 Rorug04G0304900 Rorug04G0305000 Rorug04G0305000 Rorug04G0305100
rosa_samantha	Rh4AG356900 Rh4BG367700 Rh4CG381700 Rh4DG362200 Rh4DG362300
rosa_wichuraiana	Rw0G011580 Rw0G016100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	240
AarI	CACCTGC	1 cut(s)	491
Acc36I	ACCTGC	2 cut(s)	491, 612
AccB7I	CCANNNNNTGG	1 cut(s)	199
AccBSI	CCGCTC	1 cut(s)	476
AccII	CGCG	1 cut(s)	1395
AccIII	TCCGGA	2 cut(s)	46, 747
AciI	CCGC	4 cut(s)	474, 601, 734, 1395
AclWI	GGATC	3 cut(s)	516, 739, 1550
AcoI	YGGCCR	1 cut(s)	682
AcsI	RAATTY	3 cut(s)	641, 1487, 1557
AcuI	CTGAAG	3 cut(s)	906, 1418, 1531
AfaI	GTAC	1 cut(s)	467
AfiI	CCNNNNNNNGG	5 cut(s)	109, 199, 971, 1004, 1394
AflIII	ACRYGT	1 cut(s)	752
AgsI	TTSAA	6 cut(s)	81, 211, 276, 367, 1065, 1136
AjnI	CCWGG	5 cut(s)	8, 102, 964, 988, 1149
AloI	GAACNNNNNNTCC	1 cut(s)	36
Alw21I	GWGCWC	1 cut(s)	1081
AlwI	GGATC	3 cut(s)	516, 739, 1550
AlwNI	CAGNNNCTG	2 cut(s)	323, 1579
Aor13HI	TCCGGA	2 cut(s)	46, 747
AoxI	GGCC	3 cut(s)	319, 682, 967
ApeKI	GCWGC	4 cut(s)	618, 831, 1313, 1414
ApoI	RAATTY	3 cut(s)	641, 1487, 1557
AspLEI	GCGC	2 cut(s)	660, 675
AspS9I	GGNCC	2 cut(s)	320, 1239
AsuC2I	CCSGG	1 cut(s)	304
AsuHPI	GGTGA	2 cut(s)	246, 302
AvaII	GGWCC	1 cut(s)	1239
BalI	TGGCCA	1 cut(s)	684
BanII	GRGCYC	1 cut(s)	1168
BauI	CACGAG	1 cut(s)	454
BbsI	GAAGAC	1 cut(s)	894
Bbv12I	GWGCWC	1 cut(s)	1081
BbvI	GCAGC	4 cut(s)	630, 818, 1300, 1401
BccI	CCATC	3 cut(s)	821, 966, 1176
BceAI	ACGGC	1 cut(s)	557
BcgI	CGANNNNNNTGC	4 cut(s)	965, 999, 1492, 1526
BciT130I	CCWGG	5 cut(s)	10, 104, 966, 990, 1151
BcnI	CCSGG	1 cut(s)	304
BfaI	CTAG	7 cut(s)	90, 234, 371, 677, 713, 1305, 1642
BfmI	CTRYAG	2 cut(s)	246, 423
BfoI	RGCGCY	1 cut(s)	676
BfuAI	ACCTGC	2 cut(s)	491, 612
BglI	GCCNNNNNGGC	1 cut(s)	681
BisI	GCNGC	4 cut(s)	619, 832, 1314, 1415
BlpI	GCTNAGC	1 cut(s)	861
BlsI	GCNGC	4 cut(s)	620, 833, 1315, 1416
Bme1390I	CCNGG	6 cut(s)	10, 104, 304, 966, 990, 1151
Bme18I	GGWCC	1 cut(s)	1239
BmgT120I	GGNCC	2 cut(s)	320, 1239
BmiI	GGNNCC	2 cut(s)	179, 1270
BmrFI	CCNGG	6 cut(s)	10, 104, 304, 966, 990, 1151
BmsI	GCATC	5 cut(s)	61, 544, 850, 1043, 1560
BpiI	GAAGAC	1 cut(s)	894
BpmI	CTGGAG	4 cut(s)	31, 972, 1054, 1550
Bpu1102I	GCTNAGC	1 cut(s)	861
BpuEI	CTTGAG	1 cut(s)	1384
BpuMI	CCSGG	1 cut(s)	304
Bsa29I	ATCGAT	2 cut(s)	57, 168
BsaJI	CCNNGG	5 cut(s)	193, 493, 970, 1149, 1215
BsaWI	WCCGGW	2 cut(s)	46, 747
BsaXI	ACNNNNNCTCC	3 cut(s)	34, 1122, 1152
Bsc4I	CCNNNNNNNGG	5 cut(s)	109, 199, 971, 1004, 1394
Bse1I	ACTGG	1 cut(s)	1599
Bse3DI	GCAATG	1 cut(s)	454
BseAI	TCCGGA	2 cut(s)	46, 747
BseBI	CCWGG	5 cut(s)	10, 104, 966, 990, 1151
BseCI	ATCGAT	2 cut(s)	57, 168
BseDI	CCNNGG	5 cut(s)	193, 493, 970, 1149, 1215
BseGI	GGATG	2 cut(s)	118, 841
BseLI	CCNNNNNNNGG	5 cut(s)	109, 199, 971, 1004, 1394
BseMI	GCAATG	1 cut(s)	454
BseMII	CTCAG	1 cut(s)	1058
BseNI	ACTGG	1 cut(s)	1599
BseRI	GAGGAG	1 cut(s)	472
BseXI	GCAGC	4 cut(s)	630, 818, 1300, 1401
BseYI	CCCAGC	1 cut(s)	1579
BsgI	GTGCAG	1 cut(s)	637
Bsh1236I	CGCG	1 cut(s)	1395
BshFI	GGCC	3 cut(s)	321, 684, 969
BshVI	ATCGAT	2 cut(s)	57, 168
BsiHKAI	GWGCWC	1 cut(s)	1081
BsiSI	CCGG	4 cut(s)	47, 303, 748, 1128
BslI	CCNNNNNNNGG	5 cut(s)	109, 199, 971, 1004, 1394
BsmI	GAATGC	2 cut(s)	412, 834
BsnI	GGCC	3 cut(s)	321, 684, 969
Bsp1286I	GDGCHC	2 cut(s)	1081, 1168
Bsp13I	TCCGGA	2 cut(s)	46, 747
Bsp143I	GATC	3 cut(s)	508, 744, 1542
Bsp1720I	GCTNAGC	1 cut(s)	861
Bsp19I	CCATGG	2 cut(s)	493, 1215
BspACI	CCGC	4 cut(s)	474, 601, 734, 1395
BspANI	GGCC	3 cut(s)	321, 684, 969
BspCNI	CTCAG	1 cut(s)	1057
BspDI	ATCGAT	2 cut(s)	57, 168
BspEI	TCCGGA	2 cut(s)	46, 747
BspFNI	CGCG	1 cut(s)	1395
BspLI	GGNNCC	2 cut(s)	179, 1270
BspMI	ACCTGC	2 cut(s)	491, 612
BspPI	GGATC	3 cut(s)	516, 739, 1550
BsrBI	CCGCTC	1 cut(s)	476
BsrDI	GCAATG	1 cut(s)	454
BsrI	ACTGG	1 cut(s)	1599
BssECI	CCNNGG	5 cut(s)	193, 493, 970, 1149, 1215
BssMI	GATC	3 cut(s)	508, 744, 1542
BssSI	CACGAG	1 cut(s)	454
BssT1I	CCWWGG	4 cut(s)	193, 493, 970, 1215
Bst2BI	CACGAG	1 cut(s)	454
Bst2UI	CCWGG	5 cut(s)	10, 104, 966, 990, 1151
Bst4CI	ACNGT	4 cut(s)	905, 981, 1175, 1496
Bst6I	CTCTTC	1 cut(s)	1092
BstAPI	GCANNNNNTGC	1 cut(s)	1040
BstC8I	GCNNGC	5 cut(s)	445, 611, 682, 1511, 1515
BstDEI	CTNAG	2 cut(s)	861, 1044
BstDSI	CCRYGG	2 cut(s)	493, 1215
BstF5I	GGATG	2 cut(s)	118, 841
BstFNI	CGCG	1 cut(s)	1395
BstH2I	RGCGCY	1 cut(s)	676
BstHHI	GCGC	2 cut(s)	660, 675
BstKTI	GATC	3 cut(s)	511, 747, 1545
BstMBI	GATC	3 cut(s)	508, 744, 1542
BstMWI	GCNNNNNNNGC	5 cut(s)	615, 681, 1040, 1049, 1058
BstNI	CCWGG	5 cut(s)	10, 104, 966, 990, 1151
BstNSI	RCATGY	2 cut(s)	756, 1513
BstSCI	CCNGG	6 cut(s)	8, 102, 302, 964, 988, 1149
BstSFI	CTRYAG	2 cut(s)	246, 423
BstUI	CGCG	1 cut(s)	1395
BstV1I	GCAGC	4 cut(s)	630, 818, 1300, 1401
BstV2I	GAAGAC	1 cut(s)	894
BstX2I	RGATCY	2 cut(s)	508, 1542
BstXI	CCANNNNNNTGG	3 cut(s)	494, 965, 1279
BstYI	RGATCY	2 cut(s)	508, 1542
Bsu15I	ATCGAT	2 cut(s)	57, 168
BsuRI	GGCC	3 cut(s)	321, 684, 969
BsuTUI	ATCGAT	2 cut(s)	57, 168
BtgI	CCRYGG	2 cut(s)	493, 1215
BtsCI	GGATG	2 cut(s)	118, 841
BtsI	GCAGTG	1 cut(s)	620
BtsIMutI	CAGTG	3 cut(s)	620, 1171, 1606
BveI	ACCTGC	2 cut(s)	491, 612
Cac8I	GCNNGC	5 cut(s)	445, 611, 682, 1511, 1515
CaiI	CAGNNNCTG	2 cut(s)	323, 1579
CfoI	GCGC	2 cut(s)	660, 675
Cfr13I	GGNCC	2 cut(s)	320, 1239
ClaI	ATCGAT	2 cut(s)	57, 168
Csp6I	GTAC	1 cut(s)	466
CviAII	CATG	9 cut(s)	494, 505, 753, 1216, 1279, 1310, 1349, 1448, 1510
CviQI	GTAC	1 cut(s)	466
DdeI	CTNAG	2 cut(s)	861, 1044
DpnI	GATC	3 cut(s)	510, 746, 1544
DpnII	GATC	3 cut(s)	508, 744, 1542
EaeI	YGGCCR	1 cut(s)	682
Eam1104I	CTCTTC	1 cut(s)	1092
EarI	CTCTTC	1 cut(s)	1092
Eco130I	CCWWGG	4 cut(s)	193, 493, 970, 1215
Eco24I	GRGCYC	1 cut(s)	1168
Eco47I	GGWCC	1 cut(s)	1239
Eco57I	CTGAAG	3 cut(s)	906, 1418, 1531
EcoO109I	RGGNCCY	2 cut(s)	320, 1239
EcoRI	GAATTC	1 cut(s)	1557
EcoRII	CCWGG	5 cut(s)	8, 102, 964, 988, 1149
EcoT14I	CCWWGG	4 cut(s)	193, 493, 970, 1215
EcoT22I	ATGCAT	1 cut(s)	76
EcoT38I	GRGCYC	1 cut(s)	1168
ErhI	CCWWGG	4 cut(s)	193, 493, 970, 1215
FaeI	CATG	9 cut(s)	497, 508, 756, 1219, 1282, 1313, 1352, 1451, 1513
FalI	AAGNNNNNCTT	2 cut(s)	268, 300
FatI	CATG	9 cut(s)	493, 504, 752, 1215, 1278, 1309, 1348, 1447, 1509
FauI	CCCGC	1 cut(s)	481
Fnu4HI	GCNGC	4 cut(s)	619, 832, 1314, 1415
FokI	GGATG	2 cut(s)	125, 828
FriOI	GRGCYC	1 cut(s)	1168
Fsp4HI	GCNGC	4 cut(s)	619, 832, 1314, 1415
FspBI	CTAG	7 cut(s)	90, 234, 371, 677, 713, 1305, 1642
GlaI	GCGC	2 cut(s)	659, 674
GluI	GCNGC	4 cut(s)	619, 832, 1314, 1415
GsaI	CCCAGC	1 cut(s)	1583
GsuI	CTGGAG	4 cut(s)	31, 972, 1054, 1550
HaeII	RGCGCY	1 cut(s)	676
HaeIII	GGCC	3 cut(s)	321, 684, 969
HapII	CCGG	4 cut(s)	47, 303, 748, 1128
HhaI	GCGC	2 cut(s)	660, 675
Hin1II	CATG	9 cut(s)	497, 508, 756, 1219, 1282, 1313, 1352, 1451, 1513
Hin6I	GCGC	2 cut(s)	658, 673
HinP1I	GCGC	2 cut(s)	658, 673
HincII	GTYRAC	3 cut(s)	151, 897, 1184
HindII	GTYRAC	3 cut(s)	151, 897, 1184
HinfI	GANTC	8 cut(s)	5, 143, 230, 299, 347, 591, 1283, 1301
HpaII	CCGG	4 cut(s)	47, 303, 748, 1128
HphI	GGTGA	2 cut(s)	246, 302
Hpy166II	GTNNAC	7 cut(s)	151, 731, 897, 1184, 1210, 1229, 1291
Hpy188I	TCNGA	9 cut(s)	25, 814, 886, 1047, 1300, 1357, 1437, 1556, 1622
Hpy188III	TCNNGA	9 cut(s)	47, 208, 748, 787, 824, 845, 1005, 1388, 1501
Hpy8I	GTNNAC	7 cut(s)	151, 731, 897, 1184, 1210, 1229, 1291
HpyAV	CCTTC	7 cut(s)	20, 526, 693, 701, 784, 793, 1442
HpyCH4III	ACNGT	4 cut(s)	905, 981, 1175, 1496
HpyCH4V	TGCA	6 cut(s)	74, 618, 834, 841, 1417, 1513
HpyF10VI	GCNNNNNNNGC	5 cut(s)	615, 681, 1040, 1049, 1058
HpyF3I	CTNAG	2 cut(s)	861, 1044
Hsp92II	CATG	9 cut(s)	497, 508, 756, 1219, 1282, 1313, 1352, 1451, 1513
HspAI	GCGC	2 cut(s)	658, 673
Kpn2I	TCCGGA	2 cut(s)	46, 747
Kzo9I	GATC	3 cut(s)	508, 744, 1542
LmnI	GCTCC	5 cut(s)	375, 481, 991, 1268, 1444
Lsp1109I	GCAGC	4 cut(s)	630, 818, 1300, 1401
LweI	GCATC	5 cut(s)	61, 544, 850, 1043, 1560
MaeI	CTAG	7 cut(s)	90, 234, 371, 677, 713, 1305, 1642
MaeIII	GTNAC	4 cut(s)	188, 325, 500, 913
MalI	GATC	3 cut(s)	510, 746, 1544
MbiI	CCGCTC	1 cut(s)	476
MboI	GATC	3 cut(s)	508, 744, 1542
MboII	GAAGA	5 cut(s)	62, 623, 899, 1079, 1537
MfeI	CAATTG	1 cut(s)	1418
MflI	RGATCY	2 cut(s)	508, 1542
MhlI	GDGCHC	2 cut(s)	1081, 1168
MlsI	TGGCCA	1 cut(s)	684
MluCI	AATT	8 cut(s)	107, 130, 241, 641, 1222, 1418, 1487, 1557
MluNI	TGGCCA	1 cut(s)	684
MlyI	GAGTC	1 cut(s)	14
MmeI	TCCRAC	2 cut(s)	1348, 1586
Mox20I	TGGCCA	1 cut(s)	684
Mph1103I	ATGCAT	1 cut(s)	76
MroI	TCCGGA	2 cut(s)	46, 747
MscI	TGGCCA	1 cut(s)	684
MseI	TTAA	3 cut(s)	129, 585, 1188
MslI	CAYNNNNRTG	1 cut(s)	1176
Msp20I	TGGCCA	1 cut(s)	684
MspA1I	CMGCKG	2 cut(s)	601, 1074
MspI	CCGG	4 cut(s)	47, 303, 748, 1128
MspR9I	CCNGG	6 cut(s)	10, 104, 304, 966, 990, 1151
MunI	CAATTG	1 cut(s)	1418
Mva1269I	GAATGC	2 cut(s)	412, 834
MvaI	CCWGG	5 cut(s)	10, 104, 966, 990, 1151
MvnI	CGCG	1 cut(s)	1395
MwoI	GCNNNNNNNGC	5 cut(s)	615, 681, 1040, 1049, 1058
NciI	CCSGG	1 cut(s)	304
NcoI	CCATGG	2 cut(s)	493, 1215
NdeII	GATC	3 cut(s)	508, 744, 1542
NlaIII	CATG	9 cut(s)	497, 508, 756, 1219, 1282, 1313, 1352, 1451, 1513
NlaIV	GGNNCC	2 cut(s)	179, 1270
NmuCI	GTSAC	1 cut(s)	325
NsiI	ATGCAT	1 cut(s)	76
NspI	RCATGY	2 cut(s)	756, 1513
PaeI	GCATGC	1 cut(s)	1513
PaqCI	CACCTGC	1 cut(s)	491
PciI	ACATGT	1 cut(s)	752
PcsI	WCGNNNNNNNCGW	1 cut(s)	461
PctI	GAATGC	2 cut(s)	412, 834
PfeI	GAWTC	7 cut(s)	143, 230, 299, 347, 591, 1283, 1301
PflMI	CCANNNNNTGG	1 cut(s)	199
PfoI	TCCNGGA	3 cut(s)	8, 102, 988
PkrI	GCNGC	4 cut(s)	620, 833, 1315, 1416
PleI	GAGTC	1 cut(s)	13
PpsI	GAGTC	1 cut(s)	13
PpuMI	RGGWCCY	1 cut(s)	1239
PscI	ACATGT	1 cut(s)	752
PsiI	TTATAA	1 cut(s)	240
Psp5II	RGGWCCY	1 cut(s)	1239
Psp6I	CCWGG	5 cut(s)	8, 102, 964, 988, 1149
PspFI	CCCAGC	1 cut(s)	1579
PspGI	CCWGG	5 cut(s)	8, 102, 964, 988, 1149
PspN4I	GGNNCC	2 cut(s)	179, 1270
PspPI	GGNCC	2 cut(s)	320, 1239
PspPPI	RGGWCCY	1 cut(s)	1239
PstNI	CAGNNNCTG	2 cut(s)	323, 1579
PsuI	RGATCY	2 cut(s)	508, 1542
PvuII	CAGCTG	1 cut(s)	1074
RsaI	GTAC	1 cut(s)	467
RsaNI	GTAC	1 cut(s)	466
RseI	CAYNNNNRTG	1 cut(s)	1176
SaqAI	TTAA	3 cut(s)	129, 585, 1188
SatI	GCNGC	4 cut(s)	619, 832, 1314, 1415
Sau3AI	GATC	3 cut(s)	508, 744, 1542
Sau96I	GGNCC	2 cut(s)	320, 1239
SchI	GAGTC	1 cut(s)	14
ScrFI	CCNGG	6 cut(s)	10, 104, 304, 966, 990, 1151
SduI	GDGCHC	2 cut(s)	1081, 1168
SfaNI	GCATC	5 cut(s)	61, 544, 850, 1043, 1560
SfcI	CTRYAG	2 cut(s)	246, 423
SinI	GGWCC	1 cut(s)	1239
SmiMI	CAYNNNNRTG	1 cut(s)	1176
SmlI	CTYRAG	1 cut(s)	1363
SmoI	CTYRAG	1 cut(s)	1363
SphI	GCATGC	1 cut(s)	1513
Sse9I	AATT	8 cut(s)	107, 130, 241, 641, 1222, 1418, 1487, 1557
SsiI	CCGC	4 cut(s)	474, 601, 734, 1395
SspI	AATATT	1 cut(s)	406
SspMI	CTAG	7 cut(s)	90, 234, 371, 677, 713, 1305, 1642
StyD4I	CCNGG	6 cut(s)	8, 102, 302, 964, 988, 1149
StyI	CCWWGG	4 cut(s)	193, 493, 970, 1215
TaaI	ACNGT	4 cut(s)	905, 981, 1175, 1496
TaqI	TCGA	8 cut(s)	57, 168, 308, 416, 434, 594, 723, 1202
TasI	AATT	8 cut(s)	107, 130, 241, 641, 1222, 1418, 1487, 1557
TfiI	GAWTC	7 cut(s)	143, 230, 299, 347, 591, 1283, 1301
Tru1I	TTAA	3 cut(s)	129, 585, 1188
Tru9I	TTAA	3 cut(s)	129, 585, 1188
TscAI	CASTG	3 cut(s)	620, 1178, 1606
TseFI	GTSAC	1 cut(s)	325
TseI	GCWGC	4 cut(s)	618, 831, 1313, 1414
Tsp45I	GTSAC	1 cut(s)	325
TspDTI	ATGAA	7 cut(s)	154, 270, 339, 617, 867, 1026, 1206
TspRI	CASTG	3 cut(s)	620, 1178, 1606
Van91I	CCANNNNNTGG	1 cut(s)	199
VpaK11BI	GGWCC	1 cut(s)	1239
XapI	RAATTY	3 cut(s)	641, 1487, 1557
XceI	RCATGY	2 cut(s)	756, 1513
XcmI	CCANNNNNNNNNTGG	2 cut(s)	962, 1175
XspI	CTAG	7 cut(s)	90, 234, 371, 677, 713, 1305, 1642
Zsp2I	ATGCAT	1 cut(s)	76

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.