Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G01580 |
| fragaria_vesca | FvH4_6g51580 FvH4_6g51620 |
| malus_domestica | MD07G1177500.v1.1 MD17G1023700.v1.1 MD17G1024400.v1.1 MD17G1024800.v1.1 MD17G1025100.v1.1 MD17G1025800.v1.1 MD17G1026000.v1.1 |
| prunus_persica | Prupe.3G292700_v2.0.a1 |
| pyrus_communis | pycom07g17150 pycom17g02080 pycom17g02110 |
| rosa_laevigata | RLG00000022166 |
| rosa_multiflora | Rmu_sc0000860.1_g000001 Rmu_sc0016793.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00079160 |
| rosa_rugosa | Rorug02G0565900 |
| rosa_samantha | Rh2AG646100 Rh2BG656800 Rh2CG621900 Rh2DG670200 |
| rosa_wichuraiana | Rw2G053060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 124 |
| AgsI | TTSAA | 1 cut(s) | 22 |
| AluBI | AGCT | 2 cut(s) | 107, 291 |
| AluI | AGCT | 2 cut(s) | 107, 291 |
| Alw21I | GWGCWC | 2 cut(s) | 115, 293 |
| Alw44I | GTGCAC | 1 cut(s) | 111 |
| ApaLI | GTGCAC | 1 cut(s) | 111 |
| ApoI | RAATTY | 1 cut(s) | 124 |
| AseI | ATTAAT | 1 cut(s) | 69 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 170 |
| AsuHPI | GGTGA | 1 cut(s) | 25 |
| BaeGI | GKGCMC | 1 cut(s) | 115 |
| BanII | GRGCYC | 2 cut(s) | 66, 293 |
| Bbv12I | GWGCWC | 2 cut(s) | 115, 293 |
| BccI | CCATC | 1 cut(s) | 311 |
| BfaI | CTAG | 1 cut(s) | 246 |
| BmsI | GCATC | 1 cut(s) | 252 |
| BpmI | CTGGAG | 1 cut(s) | 52 |
| Bse1I | ACTGG | 1 cut(s) | 35 |
| BseGI | GGATG | 1 cut(s) | 328 |
| BseNI | ACTGG | 1 cut(s) | 35 |
| BseSI | GKGCMC | 1 cut(s) | 115 |
| BsiHKAI | GWGCWC | 2 cut(s) | 115, 293 |
| BsiSI | CCGG | 1 cut(s) | 266 |
| Bsp1286I | GDGCHC | 3 cut(s) | 66, 115, 293 |
| Bsp143I | GATC | 1 cut(s) | 15 |
| BspHI | TCATGA | 1 cut(s) | 313 |
| BsrI | ACTGG | 1 cut(s) | 35 |
| BssMI | GATC | 1 cut(s) | 15 |
| Bst4CI | ACNGT | 1 cut(s) | 117 |
| BstF5I | GGATG | 1 cut(s) | 328 |
| BstKTI | GATC | 1 cut(s) | 18 |
| BstMBI | GATC | 1 cut(s) | 15 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 104, 308 |
| BstSLI | GKGCMC | 1 cut(s) | 115 |
| BtsCI | GGATG | 1 cut(s) | 328 |
| BtsIMutI | CAGTG | 1 cut(s) | 28 |
| CciI | TCATGA | 1 cut(s) | 313 |
| CseI | GACGC | 1 cut(s) | 94 |
| CviAII | CATG | 3 cut(s) | 149, 295, 314 |
| CviJI | RGCY | 4 cut(s) | 64, 107, 281, 291 |
| CviKI_1 | RGCY | 4 cut(s) | 64, 107, 281, 291 |
| DpnI | GATC | 1 cut(s) | 17 |
| DpnII | GATC | 1 cut(s) | 15 |
| Ecl136II | GAGCTC | 1 cut(s) | 291 |
| Eco24I | GRGCYC | 2 cut(s) | 66, 293 |
| Eco53kI | GAGCTC | 1 cut(s) | 291 |
| EcoICRI | GAGCTC | 1 cut(s) | 291 |
| EcoT38I | GRGCYC | 2 cut(s) | 66, 293 |
| FaeI | CATG | 3 cut(s) | 152, 298, 317 |
| FaiI | YATR | 6 cut(s) | 8, 150, 216, 296, 315, 331 |
| FatI | CATG | 3 cut(s) | 148, 294, 313 |
| FriOI | GRGCYC | 2 cut(s) | 66, 293 |
| FspBI | CTAG | 1 cut(s) | 246 |
| GsuI | CTGGAG | 1 cut(s) | 52 |
| HapII | CCGG | 1 cut(s) | 266 |
| HgaI | GACGC | 1 cut(s) | 94 |
| Hin1II | CATG | 3 cut(s) | 152, 298, 317 |
| HinfI | GANTC | 2 cut(s) | 171, 176 |
| HpaII | CCGG | 1 cut(s) | 266 |
| HphI | GGTGA | 1 cut(s) | 25 |
| Hpy166II | GTNNAC | 2 cut(s) | 113, 255 |
| Hpy188I | TCNGA | 1 cut(s) | 181 |
| Hpy188III | TCNNGA | 4 cut(s) | 19, 45, 74, 314 |
| Hpy8I | GTNNAC | 2 cut(s) | 113, 255 |
| HpyCH4III | ACNGT | 1 cut(s) | 117 |
| HpyCH4V | TGCA | 2 cut(s) | 113, 218 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 104, 308 |
| Hsp92II | CATG | 3 cut(s) | 152, 298, 317 |
| Kzo9I | GATC | 1 cut(s) | 15 |
| LmnI | GCTCC | 2 cut(s) | 288, 296 |
| LpnPI | CCDG | 4 cut(s) | 16, 87, 279, 316 |
| LweI | GCATC | 1 cut(s) | 252 |
| MaeI | CTAG | 1 cut(s) | 246 |
| MaeIII | GTNAC | 3 cut(s) | 82, 305, 325 |
| MalI | GATC | 1 cut(s) | 17 |
| MboI | GATC | 1 cut(s) | 15 |
| MhlI | GDGCHC | 3 cut(s) | 66, 115, 293 |
| MluCI | AATT | 3 cut(s) | 48, 124, 132 |
| MlyI | GAGTC | 1 cut(s) | 170 |
| MroXI | GAANNNNTTC | 1 cut(s) | 170 |
| MseI | TTAA | 1 cut(s) | 69 |
| MslI | CAYNNNNRTG | 2 cut(s) | 11, 260 |
| MspI | CCGG | 1 cut(s) | 266 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 104, 308 |
| NdeII | GATC | 1 cut(s) | 15 |
| NlaIII | CATG | 3 cut(s) | 152, 298, 317 |
| NmuCI | GTSAC | 1 cut(s) | 82 |
| PagI | TCATGA | 1 cut(s) | 313 |
| PdmI | GAANNNNTTC | 1 cut(s) | 170 |
| PfeI | GAWTC | 1 cut(s) | 171 |
| PleI | GAGTC | 1 cut(s) | 170 |
| PpsI | GAGTC | 1 cut(s) | 170 |
| PshBI | ATTAAT | 1 cut(s) | 69 |
| Psp124BI | GAGCTC | 1 cut(s) | 293 |
| RseI | CAYNNNNRTG | 2 cut(s) | 11, 260 |
| SacI | GAGCTC | 1 cut(s) | 293 |
| SaqAI | TTAA | 1 cut(s) | 69 |
| Sau3AI | GATC | 1 cut(s) | 15 |
| SchI | GAGTC | 1 cut(s) | 170 |
| SduI | GDGCHC | 3 cut(s) | 66, 115, 293 |
| SetI | ASST | 4 cut(s) | 109, 196, 251, 293 |
| SfaNI | GCATC | 1 cut(s) | 252 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 11, 260 |
| Sse9I | AATT | 3 cut(s) | 48, 124, 132 |
| SspMI | CTAG | 1 cut(s) | 246 |
| SstI | GAGCTC | 1 cut(s) | 293 |
| TaaI | ACNGT | 1 cut(s) | 117 |
| TaqI | TCGA | 1 cut(s) | 174 |
| TaqII | GACCGA | 1 cut(s) | 93 |
| TasI | AATT | 3 cut(s) | 48, 124, 132 |
| TfiI | GAWTC | 1 cut(s) | 171 |
| Tru1I | TTAA | 1 cut(s) | 69 |
| Tru9I | TTAA | 1 cut(s) | 69 |
| TscAI | CASTG | 1 cut(s) | 35 |
| TseFI | GTSAC | 1 cut(s) | 82 |
| Tsp45I | GTSAC | 1 cut(s) | 82 |
| TspGWI | ACGGA | 1 cut(s) | 183 |
| TspRI | CASTG | 1 cut(s) | 35 |
| VneI | GTGCAC | 1 cut(s) | 111 |
| VspI | ATTAAT | 1 cut(s) | 69 |
| XapI | RAATTY | 1 cut(s) | 124 |
| XmnI | GAANNNNTTC | 1 cut(s) | 170 |
| XspI | CTAG | 1 cut(s) | 246 |