Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0008082

Physical Location & Seq

Genomic Coordinates Forward (+)

1337468 .. 1339594

Gene Structure 2127 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g02110.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2085 bp

ATGAAAAGGAGGGACGTCCTTGCTAATCTGCTTGCATCATGTAACAGCGCGAAATCAGTGGCGCAATTGCACTCTCAAACCCTCAAAGCCGGCCTTTCCCATGACAGCTTCTTTGCCGCAAAACTCAACGCTCTCTACGCAAAATATGAGTCCCTCGGTCAGGCCCGCAAGGTGTTCGACGAAACGCCCCACAGAACTGTCTATCTCTGGAACGCCATGCTCAGGAGCTACTGTAGAGAGGACCGATGGGAGGAGACATTGTGTCTATTTCGTAGCATGATGTCTGAGTCAAGAGGTAATGAGGAAAAGCCTGATAATTTCACCATTCCCATTGCTATGAAGGCGTGTGCGAGGTTAAGGGCGCTAGCGTGTGGAAAAATAATACATGGGTTTGTGAAGAAACATGAGAAGGTTGCATTGGATATGTTTGTAGGTTCTGCATTGGTTGAATTGTATTCCAAATGCGGAGAAATGGGCGAGGCTGTGAAAGCGTTTGACGAGTTTCCACAACCGGATGTGTTTTTGTGGACTTCTATGGTTACTGGATATGAGCAGAATGGTGATCCTGAAGAAGCATTGGAGTTTTTCTCCCGAATGGTGATGGTGGGGCGCATTAATCCGGACCGAGTGACGCTTGTTAGTGCTGTTTCGGCTTGTGCTCAGTTATCAAATTTTAGAATTGGAAGTTGCGTGCATGGTGTTTCTATTAGGAACGGGTTCAACTCTAATTTATCTTTAGGTAATGCGTTGCTAAATCTATATGCAAAGACGGGTTCTGTCAAAACTGCCACTAGCTCCATGATTGCGTGTTACACTCATAATGGGGATGTAATAGAAGCGTTAAATCTTTTCAACGAAATGATTGATATGAGAACCGAACCTAATTCAGTGACTCTGGTAAGTGCATTGCAAGCATGTGCGCTGGCAGGTAATTTAGAGGAAGGTAAGAAGATCCACGAAATTGCTACTAGGAAGTGTTTCGAGTTAGATATCAAGGTAGCTACAGCCCTGATTGATATGTACATGAAGTGCTCTGCACCCGAAAAAGCAGTTGATCTCTTCAATAGAATGCCAGAGAAAGATGTGGTTTCGTGGGCTGCCTTGTTGAGTGGGTATGCTCATAACGGAATGGCATACAAGTCTATTGGGGTCTTTCGCGACTTGCTATCATACGAAACTAAGCCTGATGCCGTTGCTATGGTCAAGCTTCTTGCAGCTTGTTCAGAATTAGGGATTCTTCAACAAGCTTTTTGCCTCCATGCTTATGTGATTAAACGCGCCTTCAAGAGTAACATCCATGTTGGAGCTTCACTCATAGAGTTATACTCGAAATGCGGCAGCATAGACAATGCTGTCCTATTATTTGAAGGGATAACAGACAAAGATGTCGTTATCTGGAGCGCGATGATTGCAGCTTATGGAGTTCATGGACAAGGAGAAGAAGCTTTAAAAGTATTTGATCGGATGGTTAAGCACACAGATGTCAAGCCAAATGATGTAACATTTCTCTCGATTTTATCTGCGTGTAGCCATTCGGGTTTGGTTGAAGAAGGCATCGAGATATTCAACACGATGTTGCATGAATACCAACTTAAGCCTGGACCTGAGCACTACGGGATAATTGTTGATCTTCTTGGCCGGGCAGGAGAGCTGGACAAGGCAATGGAAATCGTTGAGACAATGCCCAATCCAATTGCACCGCATGTTTGGGGAGCCTTGCTTGGTGCATGCCAGATTCATAACAACAAAAAGCTTGGAGAGGTTGCAGCAAAGAGTCTTTTTCGGTTGGATCCTAATCATGCAGGGTATTACATCCTGCTCTCAAATATATATGCCATGGATAACAAATGGGAAAATGTGACAAATCTCAGAACTTTGATAAAGGAGAAGGGGTTAAAGAAGATGTCCGGGCAGAGTGTTGTCGAGGTGGGGAGTGACATCCGTAGTTTTGTTGCCGGAGATAGATTGCACCTTGATTCTGATCAGATTTATGGAGTGCTAGGAAAATTAGAGGTGAAAATGAGAGAGGAAGGTTATGTTCCCAATGTCAATCTCCTGCTACACGACATGGCTGATGCTGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

695

Amino Acids

76.73

Weight (kDa)

6.26

Isoelectric Point (pI)

35.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	66 - 118	1.1e-06	PPR repeat family
PPR_2	PF13041	171 - 220	2.4e-06	PPR repeat family
PPR	PF01535	175 - 201	1.6e-06	PPR repeat
PPR_2	PF13041	266 - 307	6.7e-07	PPR repeat family
PPR_2	PF13041	461 - 510	2.2e-10	PPR repeat family
PPR	PF01535	464 - 491	3e-07	PPR repeat
E_motif	PF20431	580 - 642	4.4e-15	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008082)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01580
fragaria_vesca	FvH4_6g51580 FvH4_6g51620
malus_domestica	MD07G1177500.v1.1 MD17G1023700.v1.1 MD17G1024400.v1.1 MD17G1024800.v1.1 MD17G1025100.v1.1 MD17G1025800.v1.1 MD17G1026000.v1.1
prunus_persica	Prupe.3G292700_v2.0.a1
pyrus_communis	pycom07g17150 pycom17g02080 pycom17g02110
rosa_laevigata	RLG00000022166
rosa_multiflora	Rmu_sc0000860.1_g000001 Rmu_sc0016793.1_g000001
rosa_roxburghii	Rroxscaffold_2G00079160
rosa_rugosa	Rorug02G0565900
rosa_samantha	Rh2AG646100 Rh2BG656800 Rh2CG621900 Rh2DG670200
rosa_wichuraiana	Rw2G053060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1352, 1385
AatII	GACGTC	1 cut(s)	18
Acc36I	ACCTGC	1 cut(s)	917
AccII	CGCG	4 cut(s)	50, 1158, 1278, 1403
AccIII	TCCGGA	1 cut(s)	619
AciI	CCGC	5 cut(s)	117, 166, 465, 1335, 1700
AclWI	GGATC	4 cut(s)	557, 946, 1784, 1797
AcoI	YGGCCR	1 cut(s)	1636
AcsI	RAATTY	1 cut(s)	670
AcuI	CTGAAG	1 cut(s)	588
AcyI	GRCGYC	1 cut(s)	15
AfaI	GTAC	1 cut(s)	1022
AfiI	CCNNNNNNNGG	3 cut(s)	160, 222, 250
AflII	CTTAAG	1 cut(s)	1592
AgsI	TTSAA	9 cut(s)	449, 721, 853, 1063, 1241, 1285, 1367, 1547, 1567
AhdI	GACNNNNNGTC	1 cut(s)	261
AjnI	CCWGG	1 cut(s)	1597
AjuI	GAANNNNNNNTTGG	2 cut(s)	401, 433
Alw21I	GWGCWC	3 cut(s)	661, 1034, 1611
Alw26I	GTCTC	2 cut(s)	248, 1670
AlwI	GGATC	4 cut(s)	557, 946, 1784, 1797
Aor13HI	TCCGGA	1 cut(s)	619
AoxI	GGCC	3 cut(s)	91, 162, 1636
ApeKI	GCWGC	5 cut(s)	1097, 1214, 1338, 1412, 1766
ApoI	RAATTY	1 cut(s)	670
ArsI	GACNNNNNNTTYG	4 cut(s)	95, 127, 134, 166
AseI	ATTAAT	1 cut(s)	615
Asp700I	GAANNNNTTC	2 cut(s)	716, 977
AspLEI	GCGC	7 cut(s)	50, 64, 364, 612, 922, 1280, 1403
AspS9I	GGNCC	4 cut(s)	163, 241, 622, 1601
AsuC2I	CCSGG	2 cut(s)	1640, 1909
AsuHPI	GGTGA	4 cut(s)	313, 572, 610, 2026
AsuNHI	GCTAGC	1 cut(s)	364
AvaII	GGWCC	3 cut(s)	241, 622, 1601
BamHI	GGATCC	1 cut(s)	1789
Bbv12I	GWGCWC	3 cut(s)	661, 1034, 1611
BbvI	GCAGC	5 cut(s)	1084, 1226, 1350, 1424, 1778
BccI	CCATC	3 cut(s)	240, 595, 1459
BceAI	ACGGC	1 cut(s)	1175
BcgI	CGANNNNNNTGC	2 cut(s)	157, 191
BciT130I	CCWGG	1 cut(s)	1599
BclI	TGATCA	1 cut(s)	1981
BcnI	CCSGG	2 cut(s)	1640, 1909
BcoDI	GTCTC	2 cut(s)	248, 1670
BfaI	CTAG	5 cut(s)	365, 792, 969, 2000, 2083
BfmI	CTRYAG	2 cut(s)	232, 1002
BfoI	RGCGCY	1 cut(s)	365
BfrI	CTTAAG	1 cut(s)	1592
BfuAI	ACCTGC	1 cut(s)	917
BisI	GCNGC	7 cut(s)	117, 1098, 1215, 1336, 1339, 1413, 1767
BlsI	GCNGC	7 cut(s)	118, 1099, 1216, 1337, 1340, 1414, 1768
Bme1390I	CCNGG	3 cut(s)	1599, 1640, 1909
Bme18I	GGWCC	3 cut(s)	241, 622, 1601
BmeRI	GACNNNNNGTC	1 cut(s)	261
BmgT120I	GGNCC	4 cut(s)	163, 241, 622, 1601
BmiI	GGNNCC	2 cut(s)	1714, 1791
BmrFI	CCNGG	3 cut(s)	1599, 1640, 1909
BmsI	GCATC	4 cut(s)	44, 1177, 1563, 2065
BmtI	GCTAGC	1 cut(s)	368
BplI	GAGNNNNNCTC	6 cut(s)	572, 604, 1296, 1328, 1310, 1342
BpmI	CTGGAG	1 cut(s)	1417
Bpu10I	CCTNAGC	2 cut(s)	221, 1605
BpuMI	CCSGG	2 cut(s)	1640, 1909
BsaBI	GATNNNNATC	2 cut(s)	1794, 1980
BsaHI	GRCGYC	1 cut(s)	15
BsaJI	CCNNGG	2 cut(s)	154, 1836
BsaWI	WCCGGW	2 cut(s)	511, 619
BsaXI	ACNNNNNCTCC	6 cut(s)	217, 245, 247, 275, 1877, 1907
Bsc4I	CCNNNNNNNGG	3 cut(s)	160, 222, 250
Bse118I	RCCGGY	1 cut(s)	89
Bse1I	ACTGG	1 cut(s)	547
Bse3DI	GCAATG	3 cut(s)	330, 905, 1668
Bse8I	GATNNNNATC	2 cut(s)	1794, 1980
BseAI	TCCGGA	1 cut(s)	619
BseBI	CCWGG	1 cut(s)	1599
BseDI	CCNNGG	2 cut(s)	154, 1836
BseGI	GGATG	6 cut(s)	520, 832, 1293, 1470, 1812, 1938
BseJI	GATNNNNATC	2 cut(s)	1794, 1980
BseLI	CCNNNNNNNGG	3 cut(s)	160, 222, 250
BseMI	GCAATG	3 cut(s)	330, 905, 1668
BseMII	CTCAG	5 cut(s)	235, 276, 674, 1596, 1882
BseNI	ACTGG	1 cut(s)	547
BseRI	GAGGAG	1 cut(s)	266
BseXI	GCAGC	5 cut(s)	1084, 1226, 1350, 1424, 1778
BsgI	GTGCAG	1 cut(s)	1020
Bsh1236I	CGCG	4 cut(s)	50, 1158, 1278, 1403
BshFI	GGCC	3 cut(s)	93, 164, 1638
BsiHKAI	GWGCWC	3 cut(s)	661, 1034, 1611
BsiSI	CCGG	6 cut(s)	90, 512, 620, 1639, 1908, 1956
BslFI	GGGAC	2 cut(s)	26, 136
BslI	CCNNNNNNNGG	3 cut(s)	160, 222, 250
BsmAI	GTCTC	2 cut(s)	248, 1670
BsmFI	GGGAC	2 cut(s)	26, 136
BsmI	GAATGC	1 cut(s)	1074
BsnI	GGCC	3 cut(s)	93, 164, 1638
Bsp1286I	GDGCHC	3 cut(s)	661, 1034, 1611
Bsp13I	TCCGGA	1 cut(s)	619
Bsp1407I	TGTACA	1 cut(s)	1020
Bsp143I	GATC	7 cut(s)	562, 951, 1054, 1459, 1627, 1789, 1981
Bsp19I	CCATGG	1 cut(s)	1836
Bsp68I	TCGCGA	1 cut(s)	1158
BspACI	CCGC	5 cut(s)	117, 166, 465, 1335, 1700
BspANI	GGCC	3 cut(s)	93, 164, 1638
BspCNI	CTCAG	5 cut(s)	234, 277, 673, 1597, 1881
BspEI	TCCGGA	1 cut(s)	619
BspFNI	CGCG	4 cut(s)	50, 1158, 1278, 1403
BspLI	GGNNCC	2 cut(s)	1714, 1791
BspMI	ACCTGC	1 cut(s)	917
BspOI	GCTAGC	1 cut(s)	368
BspPI	GGATC	4 cut(s)	557, 946, 1784, 1797
BspTI	CTTAAG	1 cut(s)	1592
BsrDI	GCAATG	3 cut(s)	330, 905, 1668
BsrFI	RCCGGY	1 cut(s)	89
BsrGI	TGTACA	1 cut(s)	1020
BsrI	ACTGG	1 cut(s)	547
BssAI	RCCGGY	1 cut(s)	89
BssECI	CCNNGG	2 cut(s)	154, 1836
BssMI	GATC	7 cut(s)	562, 951, 1054, 1459, 1627, 1789, 1981
BssNI	GRCGYC	1 cut(s)	15
BssT1I	CCWWGG	1 cut(s)	1836
Bst2UI	CCWGG	1 cut(s)	1599
Bst4CI	ACNGT	2 cut(s)	199, 233
Bst6I	CTCTTC	1 cut(s)	1064
BstACI	GRCGYC	1 cut(s)	15
BstAFI	CTTAAG	1 cut(s)	1592
BstAUI	TGTACA	1 cut(s)	1020
BstC8I	GCNNGC	8 cut(s)	33, 91, 166, 366, 692, 912, 924, 1729
BstDEI	CTNAG	6 cut(s)	221, 285, 660, 1179, 1605, 1868
BstDSI	CCRYGG	1 cut(s)	1836
BstENI	CCTNNNNNAGG	1 cut(s)	158
BstF5I	GGATG	6 cut(s)	520, 832, 1293, 1470, 1812, 1938
BstFNI	CGCG	4 cut(s)	50, 1158, 1278, 1403
BstH2I	RGCGCY	1 cut(s)	365
BstHHI	GCGC	7 cut(s)	50, 64, 364, 612, 922, 1280, 1403
BstKTI	GATC	7 cut(s)	565, 954, 1057, 1462, 1630, 1792, 1984
BstMAI	GTCTC	2 cut(s)	248, 1670
BstMBI	GATC	7 cut(s)	562, 951, 1054, 1459, 1627, 1789, 1981
BstMWI	GCNNNNNNNGC	6 cut(s)	137, 341, 488, 650, 911, 1409
BstNI	CCWGG	1 cut(s)	1599
BstNSI	RCATGY	3 cut(s)	918, 1706, 1731
BstSCI	CCNGG	3 cut(s)	1597, 1638, 1907
BstSFI	CTRYAG	2 cut(s)	232, 1002
BstUI	CGCG	4 cut(s)	50, 1158, 1278, 1403
BstV1I	GCAGC	5 cut(s)	1084, 1226, 1350, 1424, 1778
BstX2I	RGATCY	2 cut(s)	951, 1789
BstYI	RGATCY	2 cut(s)	951, 1789
BsuRI	GGCC	3 cut(s)	93, 164, 1638
BtgI	CCRYGG	1 cut(s)	1836
BtgZI	GCGATG	1 cut(s)	1418
BtsCI	GGATG	6 cut(s)	520, 832, 1293, 1470, 1812, 1938
BtsIMutI	CAGTG	2 cut(s)	63, 894
BtuMI	TCGCGA	1 cut(s)	1158
BveI	ACCTGC	1 cut(s)	917
Cac8I	GCNNGC	8 cut(s)	33, 91, 166, 366, 692, 912, 924, 1729
CfoI	GCGC	7 cut(s)	50, 64, 364, 612, 922, 1280, 1403
Cfr10I	RCCGGY	1 cut(s)	89
Cfr13I	GGNCC	4 cut(s)	163, 241, 622, 1601
CpoI	CGGWCCG	1 cut(s)	622
CseI	GACGC	1 cut(s)	640
Csp6I	GTAC	1 cut(s)	1021
CspI	CGGWCCG	1 cut(s)	622
CviQI	GTAC	1 cut(s)	1021
DdeI	CTNAG	6 cut(s)	221, 285, 660, 1179, 1605, 1868
DpnI	GATC	7 cut(s)	564, 953, 1056, 1461, 1629, 1791, 1983
DpnII	GATC	7 cut(s)	562, 951, 1054, 1459, 1627, 1789, 1981
DraI	TTTAAA	1 cut(s)	1449
DrdI	GACNNNNNNGTC	2 cut(s)	1352, 1385
DriI	GACNNNNNGTC	1 cut(s)	261
DseDI	GACNNNNNNGTC	2 cut(s)	1352, 1385
EaeI	YGGCCR	1 cut(s)	1636
Eam1104I	CTCTTC	1 cut(s)	1064
Eam1105I	GACNNNNNGTC	1 cut(s)	261
EarI	CTCTTC	1 cut(s)	1064
Eco130I	CCWWGG	1 cut(s)	1836
Eco32I	GATATC	1 cut(s)	991
Eco47I	GGWCC	3 cut(s)	241, 622, 1601
Eco57I	CTGAAG	1 cut(s)	588
EcoNI	CCTNNNNNAGG	1 cut(s)	158
EcoRII	CCWGG	1 cut(s)	1597
EcoRV	GATATC	1 cut(s)	991
EcoT14I	CCWWGG	1 cut(s)	1836
ErhI	CCWWGG	1 cut(s)	1836
FalI	AAGNNNNNCTT	2 cut(s)	78, 110
FaqI	GGGAC	2 cut(s)	26, 136
FauI	CCCGC	1 cut(s)	173
FbaI	TGATCA	1 cut(s)	1981
Fnu4HI	GCNGC	7 cut(s)	117, 1098, 1215, 1336, 1339, 1413, 1767
FokI	GGATG	6 cut(s)	527, 839, 1280, 1477, 1799, 1925
Fsp4HI	GCNGC	7 cut(s)	117, 1098, 1215, 1336, 1339, 1413, 1767
FspBI	CTAG	5 cut(s)	365, 792, 969, 2000, 2083
GlaI	GCGC	7 cut(s)	49, 63, 363, 611, 921, 1279, 1402
GluI	GCNGC	7 cut(s)	117, 1098, 1215, 1336, 1339, 1413, 1767
GsuI	CTGGAG	1 cut(s)	1417
HaeII	RGCGCY	1 cut(s)	365
HaeIII	GGCC	3 cut(s)	93, 164, 1638
HapII	CCGG	6 cut(s)	90, 512, 620, 1639, 1908, 1956
HgaI	GACGC	1 cut(s)	640
HhaI	GCGC	7 cut(s)	50, 64, 364, 612, 922, 1280, 1403
Hin1I	GRCGYC	1 cut(s)	15
Hin6I	GCGC	7 cut(s)	48, 62, 362, 610, 920, 1278, 1401
HinP1I	GCGC	7 cut(s)	48, 62, 362, 610, 920, 1278, 1401
HindIII	AAGCTT	4 cut(s)	1205, 1245, 1443, 1751
HinfI	GANTC	7 cut(s)	149, 287, 892, 1234, 1735, 1774, 1976
HpaII	CCGG	6 cut(s)	90, 512, 620, 1639, 1908, 1956
HphI	GGTGA	4 cut(s)	313, 572, 610, 2026
Hpy166II	GTNNAC	1 cut(s)	528
Hpy188I	TCNGA	6 cut(s)	286, 1225, 1464, 1871, 1981, 1986
Hpy8I	GTNNAC	1 cut(s)	528
Hpy99I	CGWCG	1 cut(s)	182
HpyAV	CCTTC	8 cut(s)	334, 403, 935, 1291, 1361, 1544, 1882, 2024
HpyCH4III	ACNGT	2 cut(s)	199, 233
HpyCH4IV	ACGT	1 cut(s)	15
HpyF10VI	GCNNNNNNNGC	6 cut(s)	137, 341, 488, 650, 911, 1409
HpyF3I	CTNAG	6 cut(s)	221, 285, 660, 1179, 1605, 1868
HpySE526I	ACGT	1 cut(s)	15
Hsp92I	GRCGYC	1 cut(s)	15
HspAI	GCGC	7 cut(s)	48, 62, 362, 610, 920, 1278, 1401
Kpn2I	TCCGGA	1 cut(s)	619
KroI	GCCGGC	1 cut(s)	89
KroNI	GCCGGC	1 cut(s)	91
Ksp22I	TGATCA	1 cut(s)	1981
Kzo9I	GATC	7 cut(s)	562, 951, 1054, 1459, 1627, 1789, 1981
LmnI	GCTCC	5 cut(s)	225, 800, 1304, 1398, 1712
Lsp1109I	GCAGC	5 cut(s)	1084, 1226, 1350, 1424, 1778
LweI	GCATC	4 cut(s)	44, 1177, 1563, 2065
MaeI	CTAG	5 cut(s)	365, 792, 969, 2000, 2083
MaeII	ACGT	1 cut(s)	15
MaeIII	GTNAC	9 cut(s)	41, 538, 628, 809, 889, 1289, 1498, 1858, 1934
MalI	GATC	7 cut(s)	564, 953, 1056, 1461, 1629, 1791, 1983
MboI	GATC	7 cut(s)	562, 951, 1054, 1459, 1627, 1789, 1981
MboII	GAAGA	9 cut(s)	409, 581, 961, 1051, 1229, 1451, 1559, 1622, 1912
MfeI	CAATTG	2 cut(s)	65, 1692
MflI	RGATCY	2 cut(s)	951, 1789
MhlI	GDGCHC	3 cut(s)	661, 1034, 1611
MlyI	GAGTC	4 cut(s)	158, 296, 886, 1783
MmeI	TCCRAC	2 cut(s)	1282, 1767
MroI	TCCGGA	1 cut(s)	619
MroNI	GCCGGC	1 cut(s)	89
MroXI	GAANNNNTTC	2 cut(s)	716, 977
MseI	TTAA	8 cut(s)	356, 615, 842, 1272, 1448, 1470, 1593, 1895
MslI	CAYNNNNRTG	3 cut(s)	335, 1263, 1479
MspCI	CTTAAG	1 cut(s)	1592
MspI	CCGG	6 cut(s)	90, 512, 620, 1639, 1908, 1956
MspR9I	CCNGG	3 cut(s)	1599, 1640, 1909
MunI	CAATTG	2 cut(s)	65, 1692
Mva1269I	GAATGC	1 cut(s)	1074
MvaI	CCWGG	1 cut(s)	1599
MvnI	CGCG	4 cut(s)	50, 1158, 1278, 1403
MwoI	GCNNNNNNNGC	6 cut(s)	137, 341, 488, 650, 911, 1409
NaeI	GCCGGC	1 cut(s)	91
NciI	CCSGG	2 cut(s)	1640, 1909
NcoI	CCATGG	1 cut(s)	1836
NdeII	GATC	7 cut(s)	562, 951, 1054, 1459, 1627, 1789, 1981
NgoMIV	GCCGGC	1 cut(s)	89
NheI	GCTAGC	1 cut(s)	364
NlaIV	GGNNCC	2 cut(s)	1714, 1791
NmuCI	GTSAC	4 cut(s)	628, 889, 1858, 1934
NruI	TCGCGA	1 cut(s)	1158
NspI	RCATGY	3 cut(s)	918, 1706, 1731
PaeI	GCATGC	1 cut(s)	1731
PctI	GAATGC	1 cut(s)	1074
PdiI	GCCGGC	1 cut(s)	91
PdmI	GAANNNNTTC	2 cut(s)	716, 977
PfeI	GAWTC	3 cut(s)	1234, 1735, 1976
PkrI	GCNGC	7 cut(s)	118, 1099, 1216, 1337, 1340, 1414, 1768
PleI	GAGTC	4 cut(s)	157, 295, 886, 1782
PpsI	GAGTC	4 cut(s)	157, 295, 886, 1782
PshBI	ATTAAT	1 cut(s)	615
Psp6I	CCWGG	1 cut(s)	1597
PspGI	CCWGG	1 cut(s)	1597
PspN4I	GGNNCC	2 cut(s)	1714, 1791
PspPI	GGNCC	4 cut(s)	163, 241, 622, 1601
PsuI	RGATCY	2 cut(s)	951, 1789
RruI	TCGCGA	1 cut(s)	1158
RsaI	GTAC	1 cut(s)	1022
RsaNI	GTAC	1 cut(s)	1021
RseI	CAYNNNNRTG	3 cut(s)	335, 1263, 1479
Rsr2I	CGGWCCG	1 cut(s)	622
RsrII	CGGWCCG	1 cut(s)	622
SaqAI	TTAA	8 cut(s)	356, 615, 842, 1272, 1448, 1470, 1593, 1895
SatI	GCNGC	7 cut(s)	117, 1098, 1215, 1336, 1339, 1413, 1767
Sau3AI	GATC	7 cut(s)	562, 951, 1054, 1459, 1627, 1789, 1981
Sau96I	GGNCC	4 cut(s)	163, 241, 622, 1601
SchI	GAGTC	4 cut(s)	158, 296, 886, 1783
ScrFI	CCNGG	3 cut(s)	1599, 1640, 1909
SduI	GDGCHC	3 cut(s)	661, 1034, 1611
SfaNI	GCATC	4 cut(s)	44, 1177, 1563, 2065
SfcI	CTRYAG	2 cut(s)	232, 1002
SinI	GGWCC	3 cut(s)	241, 622, 1601
SmiMI	CAYNNNNRTG	3 cut(s)	335, 1263, 1479
SmlI	CTYRAG	1 cut(s)	1592
SmoI	CTYRAG	1 cut(s)	1592
SphI	GCATGC	1 cut(s)	1731
SsiI	CCGC	5 cut(s)	117, 166, 465, 1335, 1700
SspMI	CTAG	5 cut(s)	365, 792, 969, 2000, 2083
StyD4I	CCNGG	3 cut(s)	1597, 1638, 1907
StyI	CCWWGG	1 cut(s)	1836
TaaI	ACNGT	2 cut(s)	199, 233
TaiI	ACGT	1 cut(s)	18
TaqI	TCGA	6 cut(s)	177, 981, 1328, 1511, 1557, 1923
TaqII	GACCGA	3 cut(s)	146, 258, 639
TatI	WGTACW	1 cut(s)	1020
TauI	GCSGC	2 cut(s)	119, 1338
TfiI	GAWTC	3 cut(s)	1234, 1735, 1976
Tru1I	TTAA	8 cut(s)	356, 615, 842, 1272, 1448, 1470, 1593, 1895
Tru9I	TTAA	8 cut(s)	356, 615, 842, 1272, 1448, 1470, 1593, 1895
TscAI	CASTG	2 cut(s)	63, 894
TseFI	GTSAC	4 cut(s)	628, 889, 1858, 1934
TseI	GCWGC	5 cut(s)	1097, 1214, 1338, 1412, 1766
Tsp45I	GTSAC	4 cut(s)	628, 889, 1858, 1934
TspDTI	ATGAA	6 cut(s)	17, 353, 1040, 1415, 1596, 1727
TspGWI	ACGGA	2 cut(s)	1140, 1931
TspRI	CASTG	2 cut(s)	63, 894
Vha464I	CTTAAG	1 cut(s)	1592
VpaK11BI	GGWCC	3 cut(s)	241, 622, 1601
VspI	ATTAAT	1 cut(s)	615
XagI	CCTNNNNNAGG	1 cut(s)	158
XapI	RAATTY	1 cut(s)	670
XceI	RCATGY	3 cut(s)	918, 1706, 1731
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1595
XmnI	GAANNNNTTC	2 cut(s)	716, 977
XspI	CTAG	5 cut(s)	365, 792, 969, 2000, 2083
ZraI	GACGTC	1 cut(s)	16

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.