Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0008082

Physical Location & Seq

Genomic Coordinates Forward (+)

2228700 .. 2230730

Gene Structure 2031 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00079160.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2031 bp

ATGAAAAGGCGGGAAGCCCTAGTTAATCTATTTCAAGCATGTAACGCTAGGAAACCATTAGCACAGTTACACTCTCAAACCCTCAAATCTGGGCTCGCAAATGACACCTTCTTCGCCACAAAGCTCATTGCTCTGTATTCGAAACACGAGTCACTCGGGCACGCCCGTAAGGTGTTCGACGAAACGCCTCAAAGAACTGTCCATCTGTGGAACGCTACACTCCGGAGCTACTGTAGAGAGAAGCAATGGGAAGAGACATTGTTCCTCTTTGATAAGATGTTATTATCGGATCAAATGCCGGATAATTTCACTATATCTATTGCTCTCAAGGCTTGTGCCGGGTTAAGGGTACTTGGGTATGGGAGAGTAGTACACGGGTTTGTGAAGAGGAATGAGAAGGTTGCGTTGGATGTGTTTGTGGGTTCGGCGTTGATTGAGTTTTATTCCAAGTGTGGGAAGATGGGCGAGGCAGTGAAAGTGTTCGATGAATTTTCTCAACCGGATGTGTTTCTGTGGACTAATATGGTTACTGGATATGAGCAGAATGGTAATGCTGTGGAAGCATTGGAGTTCCTGTCCAGAATGGTGACGGTTGGGCAGGTTAAGCCTGAGCGAGTGACGCTTGTTAGTGCTGTTTCTGCTTGTGCTCAGCTCTCGAGTTTTAGACTTGGAAGTTGTGTTCATGGTGTTGCTATTAGGAATGGGTTCGATTCTGATTTGTGTTTGGTAAATTCATTGCTGAATCTATATGCAAAGACGGGGTCTATCAGAACTGCCACTAGCTTGTTTTGGAAGATGCCAGAAAAAGATGTTATTTCTTGGAGCTCCATGATTGCTTGTTACACTCATAATGGGGATGTACTCGAAGCGTTGGATCTTTTCAGAGAAATGATTGATAGGAGAGTTGAGCCTAATTCAGTAACTGTGAGCAATGCATTACAAGCGTGTGCAGTGGCCTGTAACTTAGACGAGGGTAAAGAAATCCATGAACTTGCCACTAGGAAAGGTTTCGAGTTAGATGTCACAGTAGCTACAGCCCTGATCGACATGTACATGAAGTGCTCTCAACCTCAAGAAGCAGTTGATCTCTTCAGAAGAATGCCAAAGAAAGATGTGGTTTCTTGGGTTGCTTTGTTAAGTGGGTATGCTCAACATGGGATGGCATACAAATCGATGGGGATCTTTCGTAACATGCTATTAGATGAAACTCAACCTGATGCTGTTGCTATGGTTAAGATTCTTGCAGCGTGTGCAGAATTAGGGAACCTTCAACAAGCTCTTTGCCTCCATGCTTATGTGATTAAAACTGCTTTCAAGGATAATATCTTTGTTGGAGCTTCACTCATAGAGCTGTACTCAAAATGTGGTAGCATAGACAATGCAGTCCGATTATTTGAAGGGATGGCGTACAAGGATGTTGTTATCTGGAGTGCAATGATTGCAGGTTACGGAGTCCATGGACAAGGAGGAGAAGCTTTGAAAGCATTTGATCATATGGTTAAGCACGCAGCTGTTACGCCTAATGATGTAACATTTACCTCTGTTTTATCTGCGTGTAGCCATTCAGGTTTGGTTGAAGAAGGTTTGGGGATATTCAATATGATGTTGCATCAATACCAACTCAAGCCCAGACCCAAGCATTATGGAATACTGGTTGATCTTCTTGGCCGAACAGGAGAGTTGGACAAGGCCATGGAAATTGTTGAGCGAATGCCAAACCCAGCTGCACCCCATGTTTGGGGAGCCTTGCTTGGTGCATGTCGGATTCATAACAATATCGAGCTGGGAGAGGTTGTAGCAAAAAGACTTTTGGAGTTAGAACCGGATCATGCAGGTTATTACATACTGCTGTCAAATATATATGCCATGGATGATAAATGGGAAAATGTATTTAATCTTAGAACTTCCATAAGGGAGAAGGGATTAAAGAAGATCTTTGGACAGAGTGTGGTTGAGGCAGGGAGTGAGATCCGTAGTTTTGTTGCCGGAGATAGATTTCATCCTGAATTTGATCGATCTATGGATTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

676

Amino Acids

75.28

Weight (kDa)

6.59

Isoelectric Point (pI)

39.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	66 - 113	3.7e-08	PPR repeat family
PPR_2	PF13041	269 - 317	3.3e-11	PPR repeat family
PPR	PF01535	272 - 301	4.7e-08	PPR repeat
PPR_2	PF13041	471 - 520	7.1e-10	PPR repeat family
E_motif	PF20431	590 - 652	1.5e-15	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008082)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01580
fragaria_vesca	FvH4_6g51580 FvH4_6g51620
malus_domestica	MD07G1177500.v1.1 MD17G1023700.v1.1 MD17G1024400.v1.1 MD17G1024800.v1.1 MD17G1025100.v1.1 MD17G1025800.v1.1 MD17G1026000.v1.1
prunus_persica	Prupe.3G292700_v2.0.a1
pyrus_communis	pycom07g17150 pycom17g02080 pycom17g02110
rosa_laevigata	RLG00000022166
rosa_multiflora	Rmu_sc0000860.1_g000001 Rmu_sc0016793.1_g000001
rosa_roxburghii	Rroxscaffold_2G00079160
rosa_rugosa	Rorug02G0565900
rosa_samantha	Rh2AG646100 Rh2BG656800 Rh2CG621900 Rh2DG670200
rosa_wichuraiana	Rw2G053060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1382
Acc36I	ACCTGC	3 cut(s)	589, 1433, 1823
AccIII	TCCGGA	1 cut(s)	222
AciI	CCGC	1 cut(s)	10
AclWI	GGATC	5 cut(s)	297, 882, 1187, 1833, 1963
AcoI	YGGCCR	1 cut(s)	1666
AcsI	RAATTY	3 cut(s)	488, 730, 2006
AcuI	CTGAAG	1 cut(s)	1075
AfaI	GTAC	6 cut(s)	351, 372, 861, 1052, 1355, 1409
AfiI	CCNNNNNNNGG	4 cut(s)	345, 453, 1737, 1738
AflIII	ACRYGT	1 cut(s)	1047
AgsI	TTSAA	7 cut(s)	35, 1271, 1315, 1397, 1480, 1577, 1597
AjuI	GAANNNNNNNTTGG	2 cut(s)	389, 421
AloI	GAACNNNNNNTCC	2 cut(s)	663, 695
Alw21I	GWGCWC	3 cut(s)	649, 827, 1064
Alw26I	GTCTC	1 cut(s)	248
AlwI	GGATC	5 cut(s)	297, 882, 1187, 1833, 1963
AlwNI	CAGNNNCTG	1 cut(s)	923
Ama87I	CYCGRG	2 cut(s)	155, 655
Aor13HI	TCCGGA	1 cut(s)	222
AoxI	GGCC	3 cut(s)	954, 1666, 1689
ApeKI	GCWGC	3 cut(s)	1244, 1508, 1724
ApoI	RAATTY	3 cut(s)	488, 730, 2006
ArsI	GACNNNNNNTTYG	6 cut(s)	95, 127, 134, 166, 746, 778
Asp700I	GAANNNNTTC	3 cut(s)	479, 704, 1007
AsuC2I	CCSGG	1 cut(s)	340
AsuHPI	GGTGA	1 cut(s)	598
AsuII	TTCGAA	1 cut(s)	140
AvaI	CYCGRG	2 cut(s)	155, 655
BaeGI	GKGCMC	1 cut(s)	162
BaeI	ACNNNNGTAYC	2 cut(s)	341, 374
BanII	GRGCYC	2 cut(s)	96, 827
BauI	CACGAG	1 cut(s)	146
Bbv12I	GWGCWC	3 cut(s)	649, 827, 1064
BbvI	GCAGC	3 cut(s)	1256, 1520, 1711
BccI	CCATC	5 cut(s)	210, 454, 1153, 1168, 1396
BcgI	CGANNNNNNTGC	2 cut(s)	1152, 1186
BclI	TGATCA	1 cut(s)	1489
BcnI	CCSGG	1 cut(s)	340
BcoDI	GTCTC	1 cut(s)	248
BfaI	CTAG	4 cut(s)	20, 48, 780, 999
BfmI	CTRYAG	2 cut(s)	232, 1032
BfuAI	ACCTGC	3 cut(s)	589, 1433, 1823
BglII	AGATCT	1 cut(s)	1932
BisI	GCNGC	3 cut(s)	1245, 1509, 1725
BlpI	GCTNAGC	1 cut(s)	648
BlsI	GCNGC	3 cut(s)	1246, 1510, 1726
Bme1390I	CCNGG	1 cut(s)	340
BmeT110I	CYCGRG	2 cut(s)	155, 655
BmiI	GGNNCC	2 cut(s)	1265, 1744
BmrFI	CCNGG	1 cut(s)	340
BmsI	GCATC	3 cut(s)	786, 1207, 1618
BplI	GAGNNNNNCTC	4 cut(s)	1326, 1358, 1340, 1372
BpmI	CTGGAG	1 cut(s)	1447
Bpu10I	CCTNAGC	1 cut(s)	609
Bpu1102I	GCTNAGC	1 cut(s)	648
Bpu14I	TTCGAA	1 cut(s)	140
BpuEI	CTTGAG	3 cut(s)	311, 1056, 1607
BpuMI	CCSGG	1 cut(s)	340
Bsa29I	ATCGAT	2 cut(s)	1172, 2014
BsaBI	GATNNNNATC	1 cut(s)	1178
BsaJI	CCNNGG	3 cut(s)	1456, 1692, 1866
BsaWI	WCCGGW	3 cut(s)	222, 499, 1822
BsaXI	ACNNNNNCTCC	6 cut(s)	217, 247, 560, 590, 1779, 1809
Bsc4I	CCNNNNNNNGG	4 cut(s)	345, 453, 1737, 1738
Bse1I	ACTGG	2 cut(s)	535, 1656
Bse3DI	GCAATG	5 cut(s)	126, 251, 734, 937, 1440
Bse8I	GATNNNNATC	1 cut(s)	1178
BseAI	TCCGGA	1 cut(s)	222
BseCI	ATCGAT	2 cut(s)	1172, 2014
BseDI	CCNNGG	3 cut(s)	1456, 1692, 1866
BseGI	GGATG	8 cut(s)	415, 508, 862, 1164, 1407, 1420, 1876, 1999
BseJI	GATNNNNATC	1 cut(s)	1178
BseLI	CCNNNNNNNGG	4 cut(s)	345, 453, 1737, 1738
BseMI	GCAATG	5 cut(s)	126, 251, 734, 937, 1440
BseMII	CTCAG	2 cut(s)	600, 662
BseNI	ACTGG	2 cut(s)	535, 1656
BseRI	GAGGAG	1 cut(s)	1482
BseSI	GKGCMC	1 cut(s)	162
BseXI	GCAGC	3 cut(s)	1256, 1520, 1711
BseYI	CCCAGC	2 cut(s)	1720, 1783
BsgI	GTGCAG	3 cut(s)	969, 1272, 1710
BshFI	GGCC	3 cut(s)	956, 1668, 1691
BshVI	ATCGAT	2 cut(s)	1172, 2014
BsiHKAI	GWGCWC	3 cut(s)	649, 827, 1064
BsiHKCI	CYCGRG	2 cut(s)	155, 655
BsiSI	CCGG	6 cut(s)	223, 299, 339, 500, 1823, 1986
BslI	CCNNNNNNNGG	4 cut(s)	345, 453, 1737, 1738
BsmAI	GTCTC	1 cut(s)	248
BsmI	GAATGC	2 cut(s)	1104, 1716
BsnI	GGCC	3 cut(s)	956, 1668, 1691
BsoBI	CYCGRG	2 cut(s)	155, 655
Bsp119I	TTCGAA	1 cut(s)	140
Bsp1286I	GDGCHC	5 cut(s)	96, 162, 649, 827, 1064
Bsp13I	TCCGGA	1 cut(s)	222
Bsp1407I	TGTACA	1 cut(s)	1050
Bsp1720I	GCTNAGC	1 cut(s)	648
Bsp19I	CCATGG	3 cut(s)	1456, 1692, 1866
BspACI	CCGC	1 cut(s)	10
BspANI	GGCC	3 cut(s)	956, 1668, 1691
BspCNI	CTCAG	2 cut(s)	601, 661
BspDI	ATCGAT	2 cut(s)	1172, 2014
BspEI	TCCGGA	1 cut(s)	222
BspLI	GGNNCC	2 cut(s)	1265, 1744
BspMI	ACCTGC	3 cut(s)	589, 1433, 1823
BspPI	GGATC	5 cut(s)	297, 882, 1187, 1833, 1963
BspT104I	TTCGAA	1 cut(s)	140
BsrDI	GCAATG	5 cut(s)	126, 251, 734, 937, 1440
BsrGI	TGTACA	1 cut(s)	1050
BsrI	ACTGG	2 cut(s)	535, 1656
BssECI	CCNNGG	3 cut(s)	1456, 1692, 1866
BssSI	CACGAG	1 cut(s)	146
BssT1I	CCWWGG	3 cut(s)	1456, 1692, 1866
Bst2BI	CACGAG	1 cut(s)	146
Bst4CI	ACNGT	6 cut(s)	66, 199, 233, 592, 925, 1027
Bst6I	CTCTTC	3 cut(s)	246, 380, 1094
BstAPI	GCANNNNNTGC	2 cut(s)	1250, 1439
BstAUI	TGTACA	1 cut(s)	1050
BstBI	TTCGAA	1 cut(s)	140
BstC8I	GCNNGC	3 cut(s)	96, 162, 1506
BstDEI	CTNAG	4 cut(s)	609, 648, 964, 1898
BstDSI	CCRYGG	3 cut(s)	1456, 1692, 1866
BstF5I	GGATG	8 cut(s)	415, 508, 862, 1164, 1407, 1420, 1876, 1999
BstMAI	GTCTC	1 cut(s)	248
BstNSI	RCATGY	4 cut(s)	42, 1051, 1195, 1761
BstSCI	CCNGG	1 cut(s)	338
BstSFI	CTRYAG	2 cut(s)	232, 1032
BstSLI	GKGCMC	1 cut(s)	162
BstV1I	GCAGC	3 cut(s)	1256, 1520, 1711
BstX2I	RGATCY	4 cut(s)	874, 1179, 1932, 1968
BstYI	RGATCY	4 cut(s)	874, 1179, 1932, 1968
Bsu15I	ATCGAT	2 cut(s)	1172, 2014
BsuRI	GGCC	3 cut(s)	956, 1668, 1691
BsuTUI	ATCGAT	2 cut(s)	1172, 2014
BtgI	CCRYGG	3 cut(s)	1456, 1692, 1866
BtsCI	GGATG	8 cut(s)	415, 508, 862, 1164, 1407, 1420, 1876, 1999
BtsI	GCAGTG	2 cut(s)	477, 957
BtsIMutI	CAGTG	2 cut(s)	477, 957
BveI	ACCTGC	3 cut(s)	589, 1433, 1823
Cac8I	GCNNGC	3 cut(s)	96, 162, 1506
CaiI	CAGNNNCTG	1 cut(s)	923
ClaI	ATCGAT	2 cut(s)	1172, 2014
CseI	GACGC	1 cut(s)	628
Csp6I	GTAC	6 cut(s)	350, 371, 860, 1051, 1354, 1408
CviQI	GTAC	6 cut(s)	350, 371, 860, 1051, 1354, 1408
DdeI	CTNAG	4 cut(s)	609, 648, 964, 1898
DrdI	GACNNNNNNGTC	1 cut(s)	1382
DseDI	GACNNNNNNGTC	1 cut(s)	1382
EaeI	YGGCCR	1 cut(s)	1666
Eam1104I	CTCTTC	3 cut(s)	246, 380, 1094
EarI	CTCTTC	3 cut(s)	246, 380, 1094
Ecl136II	GAGCTC	1 cut(s)	825
Eco130I	CCWWGG	3 cut(s)	1456, 1692, 1866
Eco24I	GRGCYC	2 cut(s)	96, 827
Eco53kI	GAGCTC	1 cut(s)	825
Eco57I	CTGAAG	1 cut(s)	1075
Eco88I	CYCGRG	2 cut(s)	155, 655
EcoICRI	GAGCTC	1 cut(s)	825
EcoT14I	CCWWGG	3 cut(s)	1456, 1692, 1866
EcoT22I	ATGCAT	1 cut(s)	937
EcoT38I	GRGCYC	2 cut(s)	96, 827
ErhI	CCWWGG	3 cut(s)	1456, 1692, 1866
FalI	AAGNNNNNCTT	2 cut(s)	1919, 1951
FauI	CCCGC	1 cut(s)	3
FauNDI	CATATG	1 cut(s)	1494
FbaI	TGATCA	1 cut(s)	1489
Fnu4HI	GCNGC	3 cut(s)	1245, 1509, 1725
FokI	GGATG	8 cut(s)	422, 515, 869, 1171, 1414, 1427, 1883, 1986
FriOI	GRGCYC	2 cut(s)	96, 827
Fsp4HI	GCNGC	3 cut(s)	1245, 1509, 1725
FspBI	CTAG	4 cut(s)	20, 48, 780, 999
GluI	GCNGC	3 cut(s)	1245, 1509, 1725
GsaI	CCCAGC	2 cut(s)	1724, 1787
GsuI	CTGGAG	1 cut(s)	1447
HaeIII	GGCC	3 cut(s)	956, 1668, 1691
HapII	CCGG	6 cut(s)	223, 299, 339, 500, 1823, 1986
HgaI	GACGC	1 cut(s)	628
HindIII	AAGCTT	1 cut(s)	1473
HinfI	GANTC	6 cut(s)	149, 710, 742, 1237, 1452, 1765
HpaII	CCGG	6 cut(s)	223, 299, 339, 500, 1823, 1986
HphI	GGTGA	1 cut(s)	598
Hpy166II	GTNNAC	2 cut(s)	373, 516
Hpy188I	TCNGA	7 cut(s)	289, 715, 770, 884, 1094, 1388, 1764
Hpy188III	TCNNGA	6 cut(s)	223, 579, 655, 1073, 1426, 2003
Hpy8I	GTNNAC	2 cut(s)	373, 516
Hpy99I	CGWCG	1 cut(s)	182
HpyAV	CCTTC	6 cut(s)	118, 391, 1277, 1391, 1574, 1912
HpyCH4III	ACNGT	6 cut(s)	66, 199, 233, 592, 925, 1027
HpyF3I	CTNAG	4 cut(s)	609, 648, 964, 1898
Kpn2I	TCCGGA	1 cut(s)	222
Ksp22I	TGATCA	1 cut(s)	1489
LmnI	GCTCC	5 cut(s)	225, 822, 830, 1334, 1742
Lsp1109I	GCAGC	3 cut(s)	1256, 1520, 1711
LweI	GCATC	3 cut(s)	786, 1207, 1618
MaeI	CTAG	4 cut(s)	20, 48, 780, 999
MflI	RGATCY	4 cut(s)	874, 1179, 1932, 1968
MhlI	GDGCHC	5 cut(s)	96, 162, 649, 827, 1064
MluCI	AATT	7 cut(s)	304, 488, 730, 913, 1256, 1698, 2006
MlyI	GAGTC	2 cut(s)	158, 1461
MmeI	TCCRAC	5 cut(s)	387, 852, 1312, 1662, 1742
Mph1103I	ATGCAT	1 cut(s)	937
MroI	TCCGGA	1 cut(s)	222
MroXI	GAANNNNTTC	3 cut(s)	479, 704, 1007
MseI	TTAA	9 cut(s)	24, 344, 603, 1136, 1233, 1302, 1500, 1893, 1925
MslI	CAYNNNNRTG	2 cut(s)	1052, 1293
MspA1I	CMGCKG	2 cut(s)	1511, 1724
MspI	CCGG	6 cut(s)	223, 299, 339, 500, 1823, 1986
MspR9I	CCNGG	1 cut(s)	340
Mva1269I	GAATGC	2 cut(s)	1104, 1716
NciI	CCSGG	1 cut(s)	340
NcoI	CCATGG	3 cut(s)	1456, 1692, 1866
NdeI	CATATG	1 cut(s)	1494
NlaIV	GGNNCC	2 cut(s)	1265, 1744
NmuCI	GTSAC	4 cut(s)	150, 586, 616, 1021
NsiI	ATGCAT	1 cut(s)	937
NspI	RCATGY	4 cut(s)	42, 1051, 1195, 1761
NspV	TTCGAA	1 cut(s)	140
PaeR7I	CTCGAG	1 cut(s)	655
PciI	ACATGT	1 cut(s)	1047
PctI	GAATGC	2 cut(s)	1104, 1716
PdmI	GAANNNNTTC	3 cut(s)	479, 704, 1007
PfeI	GAWTC	4 cut(s)	710, 742, 1237, 1765
PflFI	GACNNNGTC	1 cut(s)	760
PkrI	GCNGC	3 cut(s)	1246, 1510, 1726
PleI	GAGTC	2 cut(s)	157, 1460
PpsI	GAGTC	2 cut(s)	157, 1460
PscI	ACATGT	1 cut(s)	1047
Psp124BI	GAGCTC	1 cut(s)	827
PspFI	CCCAGC	2 cut(s)	1720, 1783
PspN4I	GGNNCC	2 cut(s)	1265, 1744
PstNI	CAGNNNCTG	1 cut(s)	923
PsuI	RGATCY	4 cut(s)	874, 1179, 1932, 1968
PsyI	GACNNNGTC	1 cut(s)	760
PvuII	CAGCTG	2 cut(s)	1511, 1724
RsaI	GTAC	6 cut(s)	351, 372, 861, 1052, 1355, 1409
RsaNI	GTAC	6 cut(s)	350, 371, 860, 1051, 1354, 1408
RseI	CAYNNNNRTG	2 cut(s)	1052, 1293
SacI	GAGCTC	1 cut(s)	827
SaqAI	TTAA	9 cut(s)	24, 344, 603, 1136, 1233, 1302, 1500, 1893, 1925
SatI	GCNGC	3 cut(s)	1245, 1509, 1725
SchI	GAGTC	2 cut(s)	158, 1461
ScrFI	CCNGG	1 cut(s)	340
SduI	GDGCHC	5 cut(s)	96, 162, 649, 827, 1064
SfaNI	GCATC	3 cut(s)	786, 1207, 1618
SfcI	CTRYAG	2 cut(s)	232, 1032
Sfr274I	CTCGAG	1 cut(s)	655
SfuI	TTCGAA	1 cut(s)	140
SlaI	CTCGAG	1 cut(s)	655
SmiMI	CAYNNNNRTG	2 cut(s)	1052, 1293
SmlI	CTYRAG	4 cut(s)	326, 655, 1071, 1622
SmoI	CTYRAG	4 cut(s)	326, 655, 1071, 1622
Sse9I	AATT	7 cut(s)	304, 488, 730, 913, 1256, 1698, 2006
SsiI	CCGC	1 cut(s)	10
SspMI	CTAG	4 cut(s)	20, 48, 780, 999
SstI	GAGCTC	1 cut(s)	827
StyD4I	CCNGG	1 cut(s)	338
StyI	CCWWGG	3 cut(s)	1456, 1692, 1866
TaaI	ACNGT	6 cut(s)	66, 199, 233, 592, 925, 1027
TasI	AATT	7 cut(s)	304, 488, 730, 913, 1256, 1698, 2006
TatI	WGTACW	4 cut(s)	370, 859, 1050, 1353
TfiI	GAWTC	4 cut(s)	710, 742, 1237, 1765
Tru1I	TTAA	9 cut(s)	24, 344, 603, 1136, 1233, 1302, 1500, 1893, 1925
Tru9I	TTAA	9 cut(s)	24, 344, 603, 1136, 1233, 1302, 1500, 1893, 1925
TscAI	CASTG	2 cut(s)	477, 957
TseFI	GTSAC	4 cut(s)	150, 586, 616, 1021
TseI	GCWGC	3 cut(s)	1244, 1508, 1724
Tsp45I	GTSAC	4 cut(s)	150, 586, 616, 1021
TspDTI	ATGAA	9 cut(s)	17, 501, 671, 723, 1002, 1070, 1218, 1757, 1988
TspGWI	ACGGA	2 cut(s)	1464, 1961
TspRI	CASTG	2 cut(s)	477, 957
Tth111I	GACNNNGTC	1 cut(s)	760
XapI	RAATTY	3 cut(s)	488, 730, 2006
XceI	RCATGY	4 cut(s)	42, 1051, 1195, 1761
XhoI	CTCGAG	1 cut(s)	655
XmnI	GAANNNNTTC	3 cut(s)	479, 704, 1007
XspI	CTAG	4 cut(s)	20, 48, 780, 999
Zsp2I	ATGCAT	1 cut(s)	937

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.