Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0004294

Physical Location & Seq

Genomic Coordinates Reverse (-)

10261111 .. 10265300

Gene Structure 4190 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1118300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

ATGGCTGAAGCTTCAAGAGTTCTGCAGACAACTCTCCTCCCCACCTTCCACCCCCAACACAAAATCCACACATTCCACTCGCTCCCTTTGAATTTCCGTAGAAACCCAGTTCAGTGCTCTGTCTCCACGACCGACGGCGCCAAGGCCACGGTGGCGCAGAAGATTCCGTGGGGCTGCGACATTGACTCCTTGGAGAACGCTTCTGCTCTGCAGAAATGGCTGACGGATTCGGGGCTTCCGCCGCAGAAGATGGCGATAGAGAAAGTGGAAGTTGGGGAGAGGGGACTGGTTGCTTTGAAGAATATAAGGAAGGGGGAGAAGCTGCTCTTTGTGCCTCCCTCTCTGTTTATCACTGCTGACTCTGAATGGACTTGCGGTGAGGCTGGTGAAGTGTTGAAGAAAAACGGCGTACCTGATTGGCCATTTCTGGCAACCTATCTGATCAGTGAAGCAAGTTACCTTCAATCTTCTAGATGGAGCAACTATATCTCTGCCCTACCAAGACAGCCTTATTCCCTTCTGTATTGGACTCGCGAAGAACTTGATCGGTATTTGGAAGCATCACAGATCAGGCAACGGGCGATTGAAAGAGTTACTAATGTTGTTGGAACATACAACGATTTAAGGATGAGGATATTTTCCAAGTATCCTGCTTTATTTCCTGAAGAGGTGTTCAACATTGAAACCTTCAAATGGTCATTTGGAATTCTTTTCTCCCGCTTGGTTCGGTTACCCTCATTGGGTGGAAAGGTTGCGTTGGTTCCTTGGGCAGATATGCTGAATCATAGTTGTAAGGTAGACGCATTTTTGGATTATGATAAATCGTCACAGGGAGTTGTCTTTTCAACAGATGTGGCATATGAGCCAGGTGAGCAGGTTTTCATTTCCTATGGAAAGAAATCTAACGGAGAGCTGTTGCTATCTTATGGGTTTGTTCCAAGGGAGGGCACCAACCCTAGAGATTCTGTTGAGCTGCCACTGTCGCTTTCAAAATCCGACAAATGTTATAAGGAGAAGTTGGAAGTTTTGAGAAAGTATGGATTGTCAGCATCTCAGTGCTACCCTATGCAAATCACCGGTTGGCCATTGGAGCTAATGGCGTACGCTTATTTAGCCGTGAGTCCTCCAAGTATGAGTGGACAATTTGATGAGATGGCTGCTGCAGCGTCAAACAAATCTACAGCGAAGAAGGATTTACGATACAGTGAAATAGAGGAAGAAGCGTTACAGTTTATACTGGACACCTGTGAAGCCAGCATATCAAAGTATAACAAATTCTTACAGGCAAGTGGATCCATGGATTTGGATGTGACGTCTCCAAAGCAACTAAACCGAAGGTTGTTTCTGAAACAGCTAGCGGTAGACTTGAGTACTAGTGAGCGGAGAATCCTATTTCGTGCGCAATATATACTGAGAAGGAGATTGAGGGACATAAGAAGCGGTGAACTGAAAGCTCTAACAATCTTCAACGGATTCCGAAAGTTTTTCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00310 map00310

Pfam Domains

Protein Families

Rubis-subs-bind SET

Protein Analysis

498

Amino Acids

56.43

Weight (kDa)

8.98

Isoelectric Point (pI)

47.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SET	PF00856	94 - 298	2.7e-09	SET domain
Rubis-subs-bind	PF09273	330 - 464	5.4e-19	Rubisco LSMT substrate-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004294)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07670 AT3G07670
fragaria_vesca	FvH4_6g40490 FvH4_6g40490 FvH4_6g40490 FvH4_6g40490 FvH4_6g40490 FvH4_6g40490 FvH4_6g40490
malus_domestica	MD17G1118300.v1.1
prunus_persica	Prupe.3G196100_v2.0.a1 Prupe.3G196100_v2.0.a1
pyrus_communis	pycom17g10880
rosa_chinensis	RchiOBHm_Chr2g0155741 RchiOBHm_Chr2g0155751
rosa_laevigata	RLG00000020860
rosa_multiflora	Rmu_co8091832.1_g000001 Rmu_sc0002712.1_g000018 Rmu_sc0003417.1_g000003 Rmu_sc0011953.1_g000001
rosa_roxburghii	Rroxscaffold_2G00093510
rosa_rugosa	Rorug02G0449800
rosa_samantha	Rh2AG515700 Rh2AG515800 Rh2BG526700 Rh2BG526800 Rh2CG500700 Rh2CG500800 Rh2DG535700 Rh2DG535800
rosa_wichuraiana	Rw2G042410 Rw2G042420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1008
AatII	GACGTC	1 cut(s)	1316
Acc16I	TGCGCA	1 cut(s)	1401
Acc36I	ACCTGC	1 cut(s)	865
AccB1I	GGYRCC	2 cut(s)	137, 947
AccBSI	CCGCTC	1 cut(s)	1381
AccI	GTMKAC	2 cut(s)	798, 1362
AccII	CGCG	1 cut(s)	534
AciI	CCGC	7 cut(s)	239, 242, 375, 718, 1358, 1381, 1440
AclWI	GGATC	2 cut(s)	1287, 1300
AcoI	YGGCCR	2 cut(s)	419, 1082
AcsI	RAATTY	3 cut(s)	91, 705, 1274
AcuI	CTGAAG	2 cut(s)	27, 684
AcyI	GRCGYC	2 cut(s)	138, 1313
AfaI	GTAC	3 cut(s)	411, 1103, 1372
AfiI	CCNNNNNNNGG	3 cut(s)	693, 740, 944
AgeI	ACCGGT	1 cut(s)	1076
AhlI	ACTAGT	1 cut(s)	1373
AjnI	CCWGG	1 cut(s)	865
AluBI	AGCT	7 cut(s)	11, 322, 913, 973, 1093, 1354, 1454
AluI	AGCT	7 cut(s)	11, 322, 913, 973, 1093, 1354, 1454
Alw21I	GWGCWC	1 cut(s)	119
Alw26I	GTCTC	2 cut(s)	127, 1320
AlwI	GGATC	2 cut(s)	1287, 1300
AoxI	GGCC	3 cut(s)	144, 419, 1082
ApeKI	GCWGC	6 cut(s)	174, 322, 973, 1157, 1160, 1163
ApoI	RAATTY	3 cut(s)	91, 705, 1274
AsiGI	ACCGGT	1 cut(s)	1076
AspLEI	GCGC	3 cut(s)	140, 157, 1402
AsuHPI	GGTGA	5 cut(s)	389, 398, 881, 1066, 1454
AsuNHI	GCTAGC	1 cut(s)	1354
BaeGI	GKGCMC	1 cut(s)	950
BalI	TGGCCA	2 cut(s)	421, 1084
BamHI	GGATCC	1 cut(s)	1292
BanI	GGYRCC	2 cut(s)	137, 947
BarI	GAAGNNNNNNTAC	2 cut(s)	1209, 1241
Bbv12I	GWGCWC	1 cut(s)	119
BbvI	GCAGC	6 cut(s)	161, 309, 960, 1144, 1147, 1175
BccI	CCATC	3 cut(s)	244, 468, 1147
BceAI	ACGGC	3 cut(s)	151, 421, 1100
BciT130I	CCWGG	1 cut(s)	867
BciVI	GTATCC	1 cut(s)	657
BclI	TGATCA	1 cut(s)	441
BcoDI	GTCTC	2 cut(s)	127, 1320
BcuI	ACTAGT	1 cut(s)	1373
BfaI	CTAG	4 cut(s)	471, 957, 1355, 1374
BfmI	CTRYAG	4 cut(s)	23, 209, 1161, 1179
BfoI	RGCGCY	1 cut(s)	141
BfuAI	ACCTGC	1 cut(s)	865
BfuI	GTATCC	1 cut(s)	657
BglI	GCCNNNNNGGC	1 cut(s)	152
BisI	GCNGC	7 cut(s)	175, 242, 323, 974, 1158, 1161, 1164
BlsI	GCNGC	7 cut(s)	176, 243, 324, 975, 1159, 1162, 1165
BmcAI	AGTACT	1 cut(s)	1372
Bme1390I	CCNGG	1 cut(s)	867
BmiI	GGNNCC	4 cut(s)	139, 762, 949, 1294
BmrFI	CCNGG	1 cut(s)	867
BmrI	ACTGGG	1 cut(s)	101
BmsI	GCATC	2 cut(s)	569, 1058
BmtI	GCTAGC	1 cut(s)	1358
BmuI	ACTGGG	1 cut(s)	101
BpuEI	CTTGAG	1 cut(s)	1387
BsaHI	GRCGYC	2 cut(s)	138, 1313
BsaJI	CCNNGG	7 cut(s)	141, 147, 167, 189, 764, 938, 1296
BsaWI	WCCGGW	1 cut(s)	1076
BsaXI	ACNNNNNCTCC	2 cut(s)	170, 200
Bsc4I	CCNNNNNNNGG	3 cut(s)	693, 740, 944
Bse118I	RCCGGY	1 cut(s)	1076
Bse1I	ACTGG	3 cut(s)	107, 291, 1242
BseBI	CCWGG	1 cut(s)	867
BseDI	CCNNGG	7 cut(s)	141, 147, 167, 189, 764, 938, 1296
BseGI	GGATG	2 cut(s)	633, 1312
BseLI	CCNNNNNNNGG	3 cut(s)	693, 740, 944
BseMII	CTCAG	2 cut(s)	1067, 1403
BseNI	ACTGG	3 cut(s)	107, 291, 1242
BseRI	GAGGAG	1 cut(s)	26
BseSI	GKGCMC	1 cut(s)	950
BseXI	GCAGC	6 cut(s)	161, 309, 960, 1144, 1147, 1175
Bsh1236I	CGCG	1 cut(s)	534
Bsh1285I	CGRYCG	1 cut(s)	132
BshFI	GGCC	3 cut(s)	146, 421, 1084
BshNI	GGYRCC	2 cut(s)	137, 947
BshTI	ACCGGT	1 cut(s)	1076
BsiEI	CGRYCG	1 cut(s)	132
BsiHKAI	GWGCWC	1 cut(s)	119
BsiSI	CCGG	1 cut(s)	1077
BsiWI	CGTACG	1 cut(s)	1101
BslFI	GGGAC	2 cut(s)	297, 1442
BslI	CCNNNNNNNGG	3 cut(s)	693, 740, 944
BsmAI	GTCTC	2 cut(s)	127, 1320
BsmBI	CGTCTC	1 cut(s)	1320
BsmFI	GGGAC	2 cut(s)	297, 1442
BsnI	GGCC	3 cut(s)	146, 421, 1084
Bsp1286I	GDGCHC	2 cut(s)	119, 950
Bsp143I	GATC	4 cut(s)	441, 544, 567, 1292
Bsp19I	CCATGG	1 cut(s)	1296
Bsp68I	TCGCGA	1 cut(s)	534
BspACI	CCGC	7 cut(s)	239, 242, 375, 718, 1358, 1381, 1440
BspANI	GGCC	3 cut(s)	146, 421, 1084
BspCNI	CTCAG	2 cut(s)	1066, 1404
BspFNI	CGCG	1 cut(s)	534
BspLI	GGNNCC	4 cut(s)	139, 762, 949, 1294
BspMAI	CTGCAG	3 cut(s)	27, 213, 1165
BspMI	ACCTGC	1 cut(s)	865
BspOI	GCTAGC	1 cut(s)	1358
BspPI	GGATC	2 cut(s)	1287, 1300
BspT107I	GGYRCC	2 cut(s)	137, 947
BsrBI	CCGCTC	1 cut(s)	1381
BsrFI	RCCGGY	1 cut(s)	1076
BsrI	ACTGG	3 cut(s)	107, 291, 1242
BssAI	RCCGGY	1 cut(s)	1076
BssECI	CCNNGG	7 cut(s)	141, 147, 167, 189, 764, 938, 1296
BssMI	GATC	4 cut(s)	441, 544, 567, 1292
BssNI	GRCGYC	2 cut(s)	138, 1313
BssT1I	CCWWGG	5 cut(s)	141, 189, 764, 938, 1296
Bst2UI	CCWGG	1 cut(s)	867
Bst4CI	ACNGT	4 cut(s)	151, 981, 1205, 1230
Bst6I	CTCTTC	1 cut(s)	660
BstACI	GRCGYC	2 cut(s)	138, 1313
BstC8I	GCNNGC	2 cut(s)	1255, 1356
BstDEI	CTNAG	2 cut(s)	1053, 1412
BstDSI	CCRYGG	3 cut(s)	147, 167, 1296
BstEII	GGTNACC	1 cut(s)	729
BstF5I	GGATG	2 cut(s)	633, 1312
BstFNI	CGCG	1 cut(s)	534
BstH2I	RGCGCY	1 cut(s)	141
BstHHI	GCGC	3 cut(s)	140, 157, 1402
BstKTI	GATC	4 cut(s)	444, 547, 570, 1295
BstMAI	GTCTC	2 cut(s)	127, 1320
BstMBI	GATC	4 cut(s)	441, 544, 567, 1292
BstMCI	CGRYCG	1 cut(s)	132
BstMWI	GCNNNNNNNGC	9 cut(s)	152, 217, 241, 331, 871, 982, 1090, 1112, 1163
BstNI	CCWGG	1 cut(s)	867
BstPI	GGTNACC	1 cut(s)	729
BstSCI	CCNGG	1 cut(s)	865
BstSFI	CTRYAG	4 cut(s)	23, 209, 1161, 1179
BstSLI	GKGCMC	1 cut(s)	950
BstUI	CGCG	1 cut(s)	534
BstV1I	GCAGC	6 cut(s)	161, 309, 960, 1144, 1147, 1175
BstX2I	RGATCY	1 cut(s)	1292
BstXI	CCANNNNNNTGG	1 cut(s)	1303
BstYI	RGATCY	1 cut(s)	1292
BsuI	GTATCC	1 cut(s)	657
BsuRI	GGCC	3 cut(s)	146, 421, 1084
BtgI	CCRYGG	3 cut(s)	147, 167, 1296
BtsCI	GGATG	2 cut(s)	633, 1312
BtsI	GCAGTG	1 cut(s)	351
BtsIMutI	CAGTG	6 cut(s)	119, 351, 451, 977, 1061, 1210
BtuMI	TCGCGA	1 cut(s)	534
BveI	ACCTGC	1 cut(s)	865
Cac8I	GCNNGC	2 cut(s)	1255, 1356
CfoI	GCGC	3 cut(s)	140, 157, 1402
Cfr10I	RCCGGY	1 cut(s)	1076
CseI	GACGC	2 cut(s)	809, 1155
Csp6I	GTAC	3 cut(s)	410, 1102, 1371
CspAI	ACCGGT	1 cut(s)	1076
CspCI	CAANNNNNGTGG	2 cut(s)	834, 869
CviAII	CATG	1 cut(s)	1297
CviQI	GTAC	3 cut(s)	410, 1102, 1371
DdeI	CTNAG	2 cut(s)	1053, 1412
DinI	GGCGCC	1 cut(s)	139
DpnI	GATC	4 cut(s)	443, 546, 569, 1294
DpnII	GATC	4 cut(s)	441, 544, 567, 1292
EaeI	YGGCCR	2 cut(s)	419, 1082
Eam1104I	CTCTTC	1 cut(s)	660
EarI	CTCTTC	1 cut(s)	660
EciI	GGCGGA	1 cut(s)	228
Eco130I	CCWWGG	5 cut(s)	141, 189, 764, 938, 1296
Eco57I	CTGAAG	2 cut(s)	27, 684
Eco91I	GGTNACC	1 cut(s)	729
EcoO65I	GGTNACC	1 cut(s)	729
EcoRI	GAATTC	1 cut(s)	705
EcoRII	CCWGG	1 cut(s)	865
EcoT14I	CCWWGG	5 cut(s)	141, 189, 764, 938, 1296
EgeI	GGCGCC	1 cut(s)	139
EheI	GGCGCC	1 cut(s)	139
ErhI	CCWWGG	5 cut(s)	141, 189, 764, 938, 1296
Esp3I	CGTCTC	1 cut(s)	1320
FaeI	CATG	1 cut(s)	1300
FalI	AAGNNNNNCTT	4 cut(s)	311, 343, 493, 525
FaqI	GGGAC	2 cut(s)	297, 1442
FatI	CATG	1 cut(s)	1296
FauI	CCCGC	1 cut(s)	725
FauNDI	CATATG	1 cut(s)	859
FbaI	TGATCA	1 cut(s)	441
FblI	GTMKAC	2 cut(s)	798, 1362
Fnu4HI	GCNGC	7 cut(s)	175, 242, 323, 974, 1158, 1161, 1164
FokI	GGATG	2 cut(s)	640, 1319
Fsp4HI	GCNGC	7 cut(s)	175, 242, 323, 974, 1158, 1161, 1164
FspBI	CTAG	4 cut(s)	471, 957, 1355, 1374
FspI	TGCGCA	1 cut(s)	1401
GlaI	GCGC	3 cut(s)	139, 156, 1401
GluI	GCNGC	7 cut(s)	175, 242, 323, 974, 1158, 1161, 1164
HaeII	RGCGCY	1 cut(s)	141
HaeIII	GGCC	3 cut(s)	146, 421, 1084
HapII	CCGG	1 cut(s)	1077
HgaI	GACGC	2 cut(s)	809, 1155
HhaI	GCGC	3 cut(s)	140, 157, 1402
Hin1I	GRCGYC	2 cut(s)	138, 1313
Hin1II	CATG	1 cut(s)	1300
Hin6I	GCGC	3 cut(s)	138, 155, 1400
HinP1I	GCGC	3 cut(s)	138, 155, 1400
HindIII	AAGCTT	1 cut(s)	9
HpaII	CCGG	1 cut(s)	1077
HphI	GGTGA	5 cut(s)	389, 398, 881, 1066, 1454
Hpy166II	GTNNAC	4 cut(s)	799, 1139, 1363, 1445
Hpy188I	TCNGA	5 cut(s)	364, 441, 997, 1347, 1478
Hpy188III	TCNNGA	4 cut(s)	15, 471, 533, 662
Hpy8I	GTNNAC	4 cut(s)	799, 1139, 1363, 1445
Hpy99I	CGWCG	1 cut(s)	137
HpyAV	CCTTC	8 cut(s)	55, 304, 470, 527, 697, 1183, 1329, 1410
HpyCH4III	ACNGT	4 cut(s)	151, 981, 1205, 1230
HpyCH4IV	ACGT	1 cut(s)	1313
HpyCH4V	TGCA	4 cut(s)	25, 211, 1069, 1163
HpyF10VI	GCNNNNNNNGC	9 cut(s)	152, 217, 241, 331, 871, 982, 1090, 1112, 1163
HpyF3I	CTNAG	2 cut(s)	1053, 1412
HpySE526I	ACGT	1 cut(s)	1313
Hsp92I	GRCGYC	2 cut(s)	138, 1313
Hsp92II	CATG	1 cut(s)	1300
HspAI	GCGC	3 cut(s)	138, 155, 1400
KasI	GGCGCC	1 cut(s)	137
Ksp22I	TGATCA	1 cut(s)	441
Kzo9I	GATC	4 cut(s)	441, 544, 567, 1292
LmnI	GCTCC	3 cut(s)	87, 477, 1090
Lsp1109I	GCAGC	6 cut(s)	161, 309, 960, 1144, 1147, 1175
LweI	GCATC	2 cut(s)	569, 1058
MaeI	CTAG	4 cut(s)	471, 957, 1355, 1374
MaeII	ACGT	1 cut(s)	1313
MaeIII	GTNAC	6 cut(s)	455, 592, 729, 825, 1224, 1309
MalI	GATC	4 cut(s)	443, 546, 569, 1294
MbiI	CCGCTC	1 cut(s)	1381
MboI	GATC	4 cut(s)	441, 544, 567, 1292
MflI	RGATCY	1 cut(s)	1292
MhlI	GDGCHC	2 cut(s)	119, 950
MlsI	TGGCCA	2 cut(s)	421, 1084
MluCI	AATT	4 cut(s)	91, 705, 1142, 1274
MluNI	TGGCCA	2 cut(s)	421, 1084
Mly113I	GGCGCC	1 cut(s)	138
MlyI	GAGTC	4 cut(s)	179, 353, 523, 1129
MmeI	TCCRAC	3 cut(s)	586, 999, 1020
Mox20I	TGGCCA	2 cut(s)	421, 1084
MscI	TGGCCA	2 cut(s)	421, 1084
MseI	TTAA	1 cut(s)	623
MslI	CAYNNNNRTG	1 cut(s)	1054
Msp20I	TGGCCA	2 cut(s)	421, 1084
MspI	CCGG	1 cut(s)	1077
MspR9I	CCNGG	1 cut(s)	867
MvaI	CCWGG	1 cut(s)	867
MvnI	CGCG	1 cut(s)	534
MwoI	GCNNNNNNNGC	9 cut(s)	152, 217, 241, 331, 871, 982, 1090, 1112, 1163
NarI	GGCGCC	1 cut(s)	138
NcoI	CCATGG	1 cut(s)	1296
NdeI	CATATG	1 cut(s)	859
NdeII	GATC	4 cut(s)	441, 544, 567, 1292
NheI	GCTAGC	1 cut(s)	1354
NlaIII	CATG	1 cut(s)	1300
NlaIV	GGNNCC	4 cut(s)	139, 762, 949, 1294
NmuCI	GTSAC	2 cut(s)	825, 1309
NruI	TCGCGA	1 cut(s)	534
NsbI	TGCGCA	1 cut(s)	1401
PfeI	GAWTC	6 cut(s)	163, 227, 781, 962, 1386, 1473
Pfl23II	CGTACG	1 cut(s)	1101
PinAI	ACCGGT	1 cut(s)	1076
PkrI	GCNGC	7 cut(s)	176, 243, 324, 975, 1159, 1162, 1165
PleI	GAGTC	4 cut(s)	179, 353, 523, 1128
PluTI	GGCGCC	1 cut(s)	141
PpsI	GAGTC	4 cut(s)	179, 353, 523, 1128
PsiI	TTATAA	1 cut(s)	1008
Psp6I	CCWGG	1 cut(s)	865
PspEI	GGTNACC	1 cut(s)	729
PspGI	CCWGG	1 cut(s)	865
PspLI	CGTACG	1 cut(s)	1101
PspN4I	GGNNCC	4 cut(s)	139, 762, 949, 1294
PstI	CTGCAG	3 cut(s)	27, 213, 1165
PsuI	RGATCY	1 cut(s)	1292
RruI	TCGCGA	1 cut(s)	534
RsaI	GTAC	3 cut(s)	411, 1103, 1372
RsaNI	GTAC	3 cut(s)	410, 1102, 1371
RseI	CAYNNNNRTG	1 cut(s)	1054
SaqAI	TTAA	1 cut(s)	623
SatI	GCNGC	7 cut(s)	175, 242, 323, 974, 1158, 1161, 1164
Sau3AI	GATC	4 cut(s)	441, 544, 567, 1292
ScaI	AGTACT	1 cut(s)	1372
SchI	GAGTC	4 cut(s)	179, 353, 523, 1129
ScrFI	CCNGG	1 cut(s)	867
SduI	GDGCHC	2 cut(s)	119, 950
SfaNI	GCATC	2 cut(s)	569, 1058
SfcI	CTRYAG	4 cut(s)	23, 209, 1161, 1179
SfoI	GGCGCC	1 cut(s)	139
SmiMI	CAYNNNNRTG	1 cut(s)	1054
SmlI	CTYRAG	1 cut(s)	1366
SmoI	CTYRAG	1 cut(s)	1366
SpeI	ACTAGT	1 cut(s)	1373
Sse9I	AATT	4 cut(s)	91, 705, 1142, 1274
SsiI	CCGC	7 cut(s)	239, 242, 375, 718, 1358, 1381, 1440
SspDI	GGCGCC	1 cut(s)	137
SspMI	CTAG	4 cut(s)	471, 957, 1355, 1374
StyD4I	CCNGG	1 cut(s)	865
StyI	CCWWGG	5 cut(s)	141, 189, 764, 938, 1296
TaaI	ACNGT	4 cut(s)	151, 981, 1205, 1230
TaiI	ACGT	1 cut(s)	1316
TaqII	GACCGA	1 cut(s)	146
TasI	AATT	4 cut(s)	91, 705, 1142, 1274
TatI	WGTACW	1 cut(s)	1370
TauI	GCSGC	1 cut(s)	244
TfiI	GAWTC	6 cut(s)	163, 227, 781, 962, 1386, 1473
Tru1I	TTAA	1 cut(s)	623
Tru9I	TTAA	1 cut(s)	623
TscAI	CASTG	6 cut(s)	119, 358, 451, 984, 1061, 1210
TseFI	GTSAC	2 cut(s)	825, 1309
TseI	GCWGC	6 cut(s)	174, 322, 973, 1157, 1160, 1163
Tsp45I	GTSAC	2 cut(s)	825, 1309
TspDTI	ATGAA	1 cut(s)	871
TspGWI	ACGGA	5 cut(s)	86, 156, 239, 921, 1485
TspRI	CASTG	6 cut(s)	119, 358, 451, 984, 1061, 1210
XapI	RAATTY	3 cut(s)	91, 705, 1274
XbaI	TCTAGA	1 cut(s)	470
XcmI	CCANNNNNNNNNTGG	1 cut(s)	148
XmiI	GTMKAC	2 cut(s)	798, 1362
XspI	CTAG	4 cut(s)	471, 957, 1355, 1374
ZraI	GACGTC	1 cut(s)	1314
ZrmI	AGTACT	1 cut(s)	1372

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.