Clp protease-related protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G12060 |
| fragaria_vesca | FvH4_5g00880 |
| malus_domestica | MD06G1067100.v1.1 MD17G1137600.v1.1 |
| prunus_persica | Prupe.5G082000_v2.0.a1 Prupe.5G082000_v2.0.a1 |
| pyrus_communis | pycom04g06840 pycom06g06470 |
| rosa_chinensis | RchiOBHm_Chr7g0200491 RchiOBHm_Chr7g0200901 |
| rosa_laevigata | RLG00000003721 |
| rosa_multiflora | Rmu_sc0000617.1_g000023 Rmu_sc0000708.1_g000019 |
| rosa_roxburghii | Rroxscaffold_3G00255920 |
| rosa_rugosa | Rorug07G0060500 Rorug07G0060500 |
| rosa_samantha | Rh7AG186300 Rh7BG189100 Rh7CG196400 Rh7CG196900 Rh7DG190300 Rh7DG192200 |
| rosa_wichuraiana | Rw7G016320 Rw7G016400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 27 |
| AgsI | TTSAA | 1 cut(s) | 184 |
| AluBI | AGCT | 1 cut(s) | 44 |
| AluI | AGCT | 1 cut(s) | 44 |
| AoxI | GGCC | 2 cut(s) | 154, 172 |
| AspS9I | GGNCC | 1 cut(s) | 154 |
| AsuC2I | CCSGG | 1 cut(s) | 153 |
| BcnI | CCSGG | 1 cut(s) | 153 |
| Bme1390I | CCNGG | 1 cut(s) | 153 |
| BmgT120I | GGNCC | 1 cut(s) | 154 |
| BmiI | GGNNCC | 1 cut(s) | 147 |
| BmrFI | CCNGG | 1 cut(s) | 153 |
| BmsI | GCATC | 1 cut(s) | 31 |
| Bpu10I | CCTNAGC | 1 cut(s) | 18 |
| BpuMI | CCSGG | 1 cut(s) | 153 |
| BsaJI | CCNNGG | 1 cut(s) | 175 |
| BseDI | CCNNGG | 1 cut(s) | 175 |
| BseGI | GGATG | 1 cut(s) | 22 |
| BseMII | CTCAG | 1 cut(s) | 9 |
| BshFI | GGCC | 2 cut(s) | 156, 174 |
| BsiSI | CCGG | 1 cut(s) | 152 |
| BsnI | GGCC | 2 cut(s) | 156, 174 |
| BspACI | CCGC | 1 cut(s) | 27 |
| BspANI | GGCC | 2 cut(s) | 156, 174 |
| BspCNI | CTCAG | 1 cut(s) | 10 |
| BspLI | GGNNCC | 1 cut(s) | 147 |
| BssECI | CCNNGG | 1 cut(s) | 175 |
| BssT1I | CCWWGG | 1 cut(s) | 175 |
| BstC8I | GCNNGC | 1 cut(s) | 172 |
| BstDEI | CTNAG | 1 cut(s) | 18 |
| BstF5I | GGATG | 1 cut(s) | 22 |
| BstSCI | CCNGG | 1 cut(s) | 151 |
| BsuRI | GGCC | 2 cut(s) | 156, 174 |
| BtsCI | GGATG | 1 cut(s) | 22 |
| Cac8I | GCNNGC | 1 cut(s) | 172 |
| Cfr13I | GGNCC | 1 cut(s) | 154 |
| CviJI | RGCY | 6 cut(s) | 44, 65, 156, 170, 174, 180 |
| CviKI_1 | RGCY | 6 cut(s) | 44, 65, 156, 170, 174, 180 |
| DdeI | CTNAG | 1 cut(s) | 18 |
| Eco130I | CCWWGG | 1 cut(s) | 175 |
| EcoT14I | CCWWGG | 1 cut(s) | 175 |
| ErhI | CCWWGG | 1 cut(s) | 175 |
| FaiI | YATR | 1 cut(s) | 138 |
| FauI | CCCGC | 1 cut(s) | 34 |
| FokI | GGATG | 1 cut(s) | 9 |
| HaeIII | GGCC | 2 cut(s) | 156, 174 |
| HapII | CCGG | 1 cut(s) | 152 |
| HpaII | CCGG | 1 cut(s) | 152 |
| Hpy188III | TCNNGA | 1 cut(s) | 17 |
| HpyAV | CCTTC | 1 cut(s) | 134 |
| HpyF3I | CTNAG | 1 cut(s) | 18 |
| LpnPI | CCDG | 4 cut(s) | 30, 82, 156, 165 |
| LweI | GCATC | 1 cut(s) | 31 |
| MluCI | AATT | 2 cut(s) | 102, 184 |
| MnlI | CCTC | 2 cut(s) | 31, 159 |
| MspI | CCGG | 1 cut(s) | 152 |
| MspR9I | CCNGG | 1 cut(s) | 153 |
| NciI | CCSGG | 1 cut(s) | 153 |
| NlaIV | GGNNCC | 1 cut(s) | 147 |
| PspN4I | GGNNCC | 1 cut(s) | 147 |
| PspPI | GGNCC | 1 cut(s) | 154 |
| Sau96I | GGNCC | 1 cut(s) | 154 |
| ScrFI | CCNGG | 1 cut(s) | 153 |
| SetI | ASST | 2 cut(s) | 46, 151 |
| SfaNI | GCATC | 1 cut(s) | 31 |
| Sse9I | AATT | 2 cut(s) | 102, 184 |
| SsiI | CCGC | 1 cut(s) | 27 |
| StyD4I | CCNGG | 1 cut(s) | 151 |
| StyI | CCWWGG | 1 cut(s) | 175 |
| TasI | AATT | 2 cut(s) | 102, 184 |
| TspDTI | ATGAA | 1 cut(s) | 153 |