MD17G1265400.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Reverse (-)
32594055 .. 32597106
3052 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1265400.v1.1.491

Sequence Viewer

Length: 1392 bp
ATGGTGCAATTCCAAACTATTATAATAATTGCACTGTTTTCCGCGCCACAATCAAGAAAAATACAAAAACGAGTGAGAGAGAGAGAGAGAAAAACTTCAAAGCTCCAATTTGAGATTCTTCCATCTCCACTGACTTGTATTGGGGATAGGGTTAGGGTTAGGTTTGCCCGTTTGAAATTAATCTGCAGAAAGATGGAGTCGGAAGAAGAGTACAGAAGGAAGGAGCGCATGGCATTGTTGGTGATTGTGGTGCTTGCTTCACTGTCCGTCGCTTCATTACTCGTCGCCTTCAGCTACTACTGCTACGTCCGCAACAAGGTCGCCAAGCGCCTCAAGAACCACAAAGGGTCTGACCCTGAGGACAAAGGTGGTTTTTCAAATTTGCAAGTTGCTTCCAACAAAGGACTTCAGGTCTTCACATTCAAGCAACTACATTCCGCAACTGGTGGTTTCAGCAAGTCAAATGTCGTTGGCAAAGGCAGCTTTGGGTTAGTGTACCGAGGTGTTCTCCATGATGGGAGGAAAGTGGCGGTTAAGTTTATGGACGAAGCAGGAAAGCAGGGAGCAGAGGAATTCAAAATGGAGGTGGAATTGCTAAGTAGGCTGTGCTCTCCATATTTGCTGGCACTACTTGGGTATTGCTCAGATAACAGTAGTCATAAGTTGCTGGTGTATGAGTTCATGGCAAATGGTGGTTTGCAGGAACATTTGTATCCTGTCAATGGTTCTAATGCTGTCTCCTTTAAGTTAGACTGGGAAACCCGGTTGAGAATAGCTCTTGAAGCTGCGAAGGGTTTGGAGTATCTCCATGAACATGTCAGTCCTCCTGTGATTCACAGAGATTTTAAGAGCAGCAACATTCTCTTGGATAAAAACTTTCATGCCAAAGTTTCTGATTTTGGATTGGCCAAGCTGCTTGGATCTGATAAAGCTGGTGATTACGTTTCCACCAGAGTATTGGGTACACAGGGATATATTGCCCCCGAGTATGCATTAACAGGGCATTTGACAACTAAATCAGATGTTTACAGCTATGGGGTTGTGCTTTTGGAGTTGCTTACAGGCAGAGTTCCAGTTGATATGAAGAGACCTTCTGGCGAGGGTGTTCTTGTTTCTTGGGCATTGCCCCAGCTGACAGATAGGGAGCAGGTTGTACAAATCATGGATCCTGCATTAGAGGGTCAGTACTCAATGAAGGAAGTCATTCAGGTGGCAGCAATTGCTGCAATGTGCGTGCAACCCGAAGCCGATTACAGGCCGCTGATGGCAGATGTTGTGCAATCACTGGTACCGCTTGTGAAAGTTCACAGGTCAACTTCGAAGGTAGGCAGCTCATCTAGTTTTCATGCTACAAAGTCACCTACAGCGCAGATTAGTAAAGCAAGTCTATGA

Protein Analysis

464

Amino Acids

51.42

Weight (kDa)

9.45

Isoelectric Point (pI)

34.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 152 - 363 7.4e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 154 - 429 4.6e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0012244)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 23
Acc36I ACCTGC 1 cut(s) 1138
Acc65I GGTACC 1 cut(s) 1288
AccB1I GGYRCC 1 cut(s) 1288
AccII CGCG 1 cut(s) 44
AciI CCGC 6 cut(s) 42, 310, 438, 530, 1259, 1292
AclWI GGATC 3 cut(s) 928, 1160, 1173
AcoI YGGCCR 1 cut(s) 906
AcsI RAATTY 2 cut(s) 379, 572
AcuI CTGAAG 2 cut(s) 274, 392
AfaI GTAC 6 cut(s) 212, 497, 964, 1155, 1187, 1290
AfiI CCNNNNNNNGG 3 cut(s) 316, 722, 1254
AflIII ACRYGT 1 cut(s) 814
AgsI TTSAA 6 cut(s) 99, 175, 378, 424, 577, 782
AhdI GACNNNNNGTC 1 cut(s) 410
AjuI GAANNNNNNNTTGG 2 cut(s) 99, 131
Alw21I GWGCWC 1 cut(s) 611
Alw26I GTCTC 2 cut(s) 742, 1081
AlwI GGATC 3 cut(s) 928, 1160, 1173
Ama87I CYCGRG 1 cut(s) 983
AoxI GGCC 2 cut(s) 906, 1256
ApeKI GCWGC 7 cut(s) 480, 785, 852, 913, 1214, 1223, 1329
ApoI RAATTY 2 cut(s) 379, 572
AseI ATTAAT 1 cut(s) 179
Asp700I GAANNNNTTC 2 cut(s) 94, 1203
Asp718I GGTACC 1 cut(s) 1288
AspLEI GCGC 4 cut(s) 46, 228, 330, 1369
AsuC2I CCSGG 1 cut(s) 763
AsuHPI GGTGA 3 cut(s) 253, 947, 1350
AsuII TTCGAA 1 cut(s) 1319
AvaI CYCGRG 1 cut(s) 983
AxyI CCTNAGG 1 cut(s) 357
BaeI ACNNNNGTAYC 2 cut(s) 695, 728
BalI TGGCCA 1 cut(s) 908
BamHI GGATCC 1 cut(s) 1165
BanI GGYRCC 1 cut(s) 1288
BbsI GAAGAC 1 cut(s) 406
Bbv12I GWGCWC 1 cut(s) 611
BbvI GCAGC 7 cut(s) 492, 772, 864, 900, 1210, 1226, 1341
BccI CCATC 4 cut(s) 130, 187, 509, 1258
BcgI CGANNNNNNTGC 2 cut(s) 301, 335
BciVI GTATCC 1 cut(s) 723
BcnI CCSGG 1 cut(s) 763
BcoDI GTCTC 2 cut(s) 742, 1081
BfaI CTAG 1 cut(s) 1338
BfmI CTRYAG 2 cut(s) 184, 1362
BfoI RGCGCY 1 cut(s) 331
BfuAI ACCTGC 1 cut(s) 1138
BfuI GTATCC 1 cut(s) 723
BisI GCNGC 8 cut(s) 481, 786, 853, 914, 1215, 1224, 1259, 1330
BlsI GCNGC 8 cut(s) 482, 787, 854, 915, 1216, 1225, 1260, 1331
BmcAI AGTACT 1 cut(s) 1187
Bme1390I CCNGG 1 cut(s) 763
BmeRI GACNNNNNGTC 1 cut(s) 410
BmeT110I CYCGRG 1 cut(s) 983
BmiI GGNNCC 2 cut(s) 1167, 1290
BmrFI CCNGG 1 cut(s) 763
BmrI ACTGGG 1 cut(s) 763
BmuI ACTGGG 1 cut(s) 763
BpiI GAAGAC 1 cut(s) 406
BplI GAGNNNNNCTC 4 cut(s) 492, 524, 760, 792
Bpu14I TTCGAA 1 cut(s) 1319
BpuEI CTTGAG 1 cut(s) 317
BpuMI CCSGG 1 cut(s) 763
BsaI GGTCTC 1 cut(s) 1081
BsaJI CCNNGG 1 cut(s) 499
Bsc4I CCNNNNNNNGG 3 cut(s) 316, 722, 1254
Bse1I ACTGG 4 cut(s) 448, 758, 1073, 1290
Bse21I CCTNAGG 1 cut(s) 357
Bse3DI GCAATG 2 cut(s) 1121, 1233
BseDI CCNNGG 1 cut(s) 499
BseLI CCNNNNNNNGG 3 cut(s) 316, 722, 1254
BseMI GCAATG 2 cut(s) 1121, 1233
BseMII CTCAG 2 cut(s) 348, 657
BseNI ACTGG 4 cut(s) 448, 758, 1073, 1290
BseXI GCAGC 7 cut(s) 492, 772, 864, 900, 1210, 1226, 1341
BseYI CCCAGC 1 cut(s) 1128
Bsh1236I CGCG 1 cut(s) 44
BshFI GGCC 2 cut(s) 908, 1258
BshNI GGYRCC 1 cut(s) 1288
BsiHKAI GWGCWC 1 cut(s) 611
BsiHKCI CYCGRG 1 cut(s) 983
BsiSI CCGG 1 cut(s) 763
BslI CCNNNNNNNGG 3 cut(s) 316, 722, 1254
BsmAI GTCTC 2 cut(s) 742, 1081
BsnI GGCC 2 cut(s) 908, 1258
Bso31I GGTCTC 1 cut(s) 1081
BsoBI CYCGRG 1 cut(s) 983
Bsp119I TTCGAA 1 cut(s) 1319
Bsp1286I GDGCHC 1 cut(s) 611
Bsp1407I TGTACA 1 cut(s) 1153
Bsp143I GATC 2 cut(s) 920, 1165
BspACI CCGC 6 cut(s) 42, 310, 438, 530, 1259, 1292
BspANI GGCC 2 cut(s) 908, 1258
BspCNI CTCAG 2 cut(s) 349, 656
BspFNI CGCG 1 cut(s) 44
BspLI GGNNCC 2 cut(s) 1167, 1290
BspMAI CTGCAG 1 cut(s) 188
BspMI ACCTGC 1 cut(s) 1138
BspPI GGATC 3 cut(s) 928, 1160, 1173
BspT104I TTCGAA 1 cut(s) 1319
BspT107I GGYRCC 1 cut(s) 1288
BspTNI GGTCTC 1 cut(s) 1081
BsrDI GCAATG 2 cut(s) 1121, 1233
BsrGI TGTACA 1 cut(s) 1153
BsrI ACTGG 4 cut(s) 448, 758, 1073, 1290
BssECI CCNNGG 1 cut(s) 499
BssMI GATC 2 cut(s) 920, 1165
Bst4CI ACNGT 3 cut(s) 36, 264, 653
Bst6I CTCTTC 2 cut(s) 201, 1079
BstAPI GCANNNNNTGC 2 cut(s) 1220, 1223
BstAUI TGTACA 1 cut(s) 1153
BstBI TTCGAA 1 cut(s) 1319
BstC8I GCNNGC 3 cut(s) 255, 624, 1235
BstDEI CTNAG 3 cut(s) 357, 596, 643
BstFNI CGCG 1 cut(s) 44
BstH2I RGCGCY 1 cut(s) 331
BstHHI GCGC 4 cut(s) 46, 228, 330, 1369
BstKTI GATC 2 cut(s) 923, 1168
BstMAI GTCTC 2 cut(s) 742, 1081
BstMBI GATC 2 cut(s) 920, 1165
BstMWI GCNNNNNNNGC 7 cut(s) 300, 309, 480, 601, 782, 1220, 1223
BstNSI RCATGY 1 cut(s) 818
BstSCI CCNGG 1 cut(s) 761
BstSFI CTRYAG 2 cut(s) 184, 1362
BstUI CGCG 1 cut(s) 44
BstV1I GCAGC 7 cut(s) 492, 772, 864, 900, 1210, 1226, 1341
BstV2I GAAGAC 1 cut(s) 406
BstX2I RGATCY 2 cut(s) 920, 1165
BstXI CCANNNNNNTGG 1 cut(s) 958
BstYI RGATCY 2 cut(s) 920, 1165
Bsu36I CCTNAGG 1 cut(s) 357
BsuI GTATCC 1 cut(s) 723
BsuRI GGCC 2 cut(s) 908, 1258
BtsIMutI CAGTG 4 cut(s) 32, 128, 260, 1283
BveI ACCTGC 1 cut(s) 1138
Cac8I GCNNGC 3 cut(s) 255, 624, 1235
CfoI GCGC 4 cut(s) 46, 228, 330, 1369
Csp6I GTAC 6 cut(s) 211, 496, 963, 1154, 1186, 1289
CviAII CATG 8 cut(s) 229, 512, 682, 809, 815, 881, 1162, 1346
CviQI GTAC 6 cut(s) 211, 496, 963, 1154, 1186, 1289
DdeI CTNAG 3 cut(s) 357, 596, 643
DpnI GATC 2 cut(s) 922, 1167
DpnII GATC 2 cut(s) 920, 1165
DriI GACNNNNNGTC 1 cut(s) 410
EaeI YGGCCR 1 cut(s) 906
Eam1104I CTCTTC 2 cut(s) 201, 1079
Eam1105I GACNNNNNGTC 1 cut(s) 410
EarI CTCTTC 2 cut(s) 201, 1079
Eco31I GGTCTC 1 cut(s) 1081
Eco57I CTGAAG 2 cut(s) 274, 392
Eco81I CCTNAGG 1 cut(s) 357
Eco88I CYCGRG 1 cut(s) 983
EcoRI GAATTC 1 cut(s) 572
EcoT22I ATGCAT 1 cut(s) 994
FaeI CATG 8 cut(s) 232, 515, 685, 812, 818, 884, 1165, 1349
FatI CATG 8 cut(s) 228, 511, 681, 808, 814, 880, 1161, 1345
Fnu4HI GCNGC 8 cut(s) 481, 786, 853, 914, 1215, 1224, 1259, 1330
Fsp4HI GCNGC 8 cut(s) 481, 786, 853, 914, 1215, 1224, 1259, 1330
FspBI CTAG 1 cut(s) 1338
GlaI GCGC 4 cut(s) 45, 227, 329, 1368
GluI GCNGC 8 cut(s) 481, 786, 853, 914, 1215, 1224, 1259, 1330
GsaI CCCAGC 1 cut(s) 1132
HaeII RGCGCY 1 cut(s) 331
HaeIII GGCC 2 cut(s) 908, 1258
HapII CCGG 1 cut(s) 763
HhaI GCGC 4 cut(s) 46, 228, 330, 1369
Hin1II CATG 8 cut(s) 232, 515, 685, 812, 818, 884, 1165, 1349
Hin6I GCGC 4 cut(s) 44, 226, 328, 1367
HinP1I GCGC 4 cut(s) 44, 226, 328, 1367
HincII GTYRAC 1 cut(s) 1314
HindII GTYRAC 1 cut(s) 1314
HinfI GANTC 3 cut(s) 115, 197, 832
HpaII CCGG 1 cut(s) 763
HphI GGTGA 3 cut(s) 253, 947, 1350
Hpy166II GTNNAC 5 cut(s) 496, 965, 1027, 1306, 1314
Hpy188I TCNGA 6 cut(s) 202, 352, 646, 895, 925, 1021
Hpy188III TCNNGA 3 cut(s) 54, 334, 779
Hpy8I GTNNAC 5 cut(s) 496, 965, 1027, 1306, 1314
Hpy99I CGWCG 2 cut(s) 272, 287
HpyAV CCTTC 7 cut(s) 210, 214, 298, 784, 1101, 1189, 1315
HpyCH4III ACNGT 3 cut(s) 36, 264, 653
HpyCH4IV ACGT 2 cut(s) 306, 942
HpyF10VI GCNNNNNNNGC 7 cut(s) 300, 309, 480, 601, 782, 1220, 1223
HpyF3I CTNAG 3 cut(s) 357, 596, 643
HpySE526I ACGT 2 cut(s) 306, 942
Hsp92II CATG 8 cut(s) 232, 515, 685, 812, 818, 884, 1165, 1349
HspAI GCGC 4 cut(s) 44, 226, 328, 1367
KpnI GGTACC 1 cut(s) 1292
Kzo9I GATC 2 cut(s) 920, 1165
LmnI GCTCC 4 cut(s) 108, 223, 563, 1144
Lsp1109I GCAGC 7 cut(s) 492, 772, 864, 900, 1210, 1226, 1341
MaeI CTAG 1 cut(s) 1338
MaeII ACGT 2 cut(s) 306, 942
MaeIII GTNAC 1 cut(s) 1356
MalI GATC 2 cut(s) 922, 1167
MboI GATC 2 cut(s) 920, 1165
MboII GAAGA 5 cut(s) 110, 215, 218, 406, 1096
MfeI CAATTG 1 cut(s) 1218
MflI RGATCY 2 cut(s) 920, 1165
MhlI GDGCHC 1 cut(s) 611
MlsI TGGCCA 1 cut(s) 908
MluCI AATT 8 cut(s) 8, 27, 107, 176, 379, 572, 590, 1218
MluNI TGGCCA 1 cut(s) 908
MlyI GAGTC 1 cut(s) 206
MmeI TCCRAC 2 cut(s) 180, 420
MnlI CCTC 9 cut(s) 341, 352, 494, 513, 562, 577, 834, 1093, 1171
Mox20I TGGCCA 1 cut(s) 908
Mph1103I ATGCAT 1 cut(s) 994
MroXI GAANNNNTTC 2 cut(s) 94, 1203
MscI TGGCCA 1 cut(s) 908
MseI TTAA 5 cut(s) 179, 534, 744, 846, 995
MslI CAYNNNNRTG 2 cut(s) 813, 1208
Msp20I TGGCCA 1 cut(s) 908
MspA1I CMGCKG 2 cut(s) 1132, 1261
MspI CCGG 1 cut(s) 763
MspR9I CCNGG 1 cut(s) 763
MunI CAATTG 1 cut(s) 1218
MvnI CGCG 1 cut(s) 44
MwoI GCNNNNNNNGC 7 cut(s) 300, 309, 480, 601, 782, 1220, 1223
NciI CCSGG 1 cut(s) 763
NdeII GATC 2 cut(s) 920, 1165
NlaIII CATG 8 cut(s) 232, 515, 685, 812, 818, 884, 1165, 1349
NlaIV GGNNCC 2 cut(s) 1167, 1290
NmuCI GTSAC 1 cut(s) 1356
NsiI ATGCAT 1 cut(s) 994
NspI RCATGY 1 cut(s) 818
NspV TTCGAA 1 cut(s) 1319
PciI ACATGT 1 cut(s) 814
PdmI GAANNNNTTC 2 cut(s) 94, 1203
PfeI GAWTC 2 cut(s) 115, 832
PkrI GCNGC 8 cut(s) 482, 787, 854, 915, 1216, 1225, 1260, 1331
PleI GAGTC 1 cut(s) 205
PpsI GAGTC 1 cut(s) 205
PscI ACATGT 1 cut(s) 814
PshBI ATTAAT 1 cut(s) 179
PsiI TTATAA 1 cut(s) 23
PspFI CCCAGC 1 cut(s) 1128
PspN4I GGNNCC 2 cut(s) 1167, 1290
PstI CTGCAG 1 cut(s) 188
PsuI RGATCY 2 cut(s) 920, 1165
PvuII CAGCTG 1 cut(s) 1132
RsaI GTAC 6 cut(s) 212, 497, 964, 1155, 1187, 1290
RsaNI GTAC 6 cut(s) 211, 496, 963, 1154, 1186, 1289
RseI CAYNNNNRTG 2 cut(s) 813, 1208
SaqAI TTAA 5 cut(s) 179, 534, 744, 846, 995
SatI GCNGC 8 cut(s) 481, 786, 853, 914, 1215, 1224, 1259, 1330
Sau3AI GATC 2 cut(s) 920, 1165
ScaI AGTACT 1 cut(s) 1187
SchI GAGTC 1 cut(s) 206
ScrFI CCNGG 1 cut(s) 763
SduI GDGCHC 1 cut(s) 611
SfcI CTRYAG 2 cut(s) 184, 1362
SfuI TTCGAA 1 cut(s) 1319
SmiMI CAYNNNNRTG 2 cut(s) 813, 1208
SmlI CTYRAG 1 cut(s) 332
SmoI CTYRAG 1 cut(s) 332
Sse9I AATT 8 cut(s) 8, 27, 107, 176, 379, 572, 590, 1218
SsiI CCGC 6 cut(s) 42, 310, 438, 530, 1259, 1292
SspMI CTAG 1 cut(s) 1338
StyD4I CCNGG 1 cut(s) 761
TaaI ACNGT 3 cut(s) 36, 264, 653
TaiI ACGT 2 cut(s) 309, 945
TaqI TCGA 1 cut(s) 1319
TasI AATT 8 cut(s) 8, 27, 107, 176, 379, 572, 590, 1218
TatI WGTACW 3 cut(s) 210, 1153, 1185
TauI GCSGC 1 cut(s) 1261
TfiI GAWTC 2 cut(s) 115, 832
Tru1I TTAA 5 cut(s) 179, 534, 744, 846, 995
Tru9I TTAA 5 cut(s) 179, 534, 744, 846, 995
TscAI CASTG 4 cut(s) 39, 135, 267, 1290
TseFI GTSAC 1 cut(s) 1356
TseI GCWGC 7 cut(s) 480, 785, 852, 913, 1214, 1223, 1329
Tsp45I GTSAC 1 cut(s) 1356
TspDTI ATGAA 7 cut(s) 264, 670, 825, 869, 1097, 1208, 1334
TspGWI ACGGA 1 cut(s) 256
TspRI CASTG 4 cut(s) 39, 135, 267, 1290
VspI ATTAAT 1 cut(s) 179
XapI RAATTY 2 cut(s) 379, 572
XceI RCATGY 1 cut(s) 818
XcmI CCANNNNNNNNNTGG 1 cut(s) 955
XmnI GAANNNNTTC 2 cut(s) 94, 1203
XspI CTAG 1 cut(s) 1338
ZrmI AGTACT 1 cut(s) 1187
Zsp2I ATGCAT 1 cut(s) 994
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.