Rorug02G0291400
ERF Family

UTP--glucose-1-phosphate uridylyltransferase-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
32033798 .. 32043440
9643 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0291400.1

Sequence Viewer

Length: 2508 bp
ATGAAGATACTAGCTTGGCTGCTTTCTTTGCTACTGTGCTTCACATTGTGTTTGGGATACAATGTGAGCTACGACAGCCGCTCTTTGATAATCAATGGCCAAAGAAAGCTGCTCATTTCTGCTGCCATTCACTACCCTCGTAGTGTCCCTGCGATGTGGCCGGGGCTAGTTCAGACGGCGAAAGAAGGAGGGGTTGATGTGATTGAGACATATGTGTTTTGGAATGGTCATGAACCGTCTCCAGGCAATTATTATTTTGGAGGACGATATGATCTGGTCAAGTTTGCGAAGATCGTGGAGGATGCTGGAATGTATTTGATTCTTCGAATTGGCCCATTCGTTGCAGCAGAATGGTACTTTGGCGGGGTACCTGTGTGGTTGCATTATGTGCCTGACACTGTATTTCGAACTGACAATGAGCCCTTTAAGTATCACATGCAGAAGTTCACAACGTTCATAGTTAATCTAATGAAACAGGAGAAGCTTTTTGCACCTCAAGGAGGTCCAATTATTTTGGCTCAGATAGAAAATGAATATGGATACTACGAAAAAGATTATGGAGAGGGGGGCAAAAAATATGCACAGTGGTCTGCTAGCATGGCTGTTGCTCAGAATATCGGTGTGCCATGGATCATGTGCCAACAGTTTGATGCTCCAGAGTCTGTGATAAATACATGTAACTCCTTCTACTGTGACCAATTTACTCCTATTTTTCCGAACAAACCTAAAATTTGGACAGAGAATTGGCCTGGCTGGTTTAAAACATTTGGGGCCAGAAATCCTCACAGGCCATCTGAAGATATTGCTTTTTCTGTAGCTCGTTTTTTCCAAAAAGGTGGCAGTGTACAAAATTACTACATGTATCATGGAGGAACAAATTTTGGCCGCACTTCAGGTGGACCATTTATAACCACAAGTTATGACTATGAGGCACCAATCGATGAATATGGATTACCAAGGCTTCCAAAATGGGCACATCTTAAGCAACTTCACCTAGCAATTAAGTTATGTGAGCATGCTTTGCTCAACAGTGAACCCACTCATGTATCGTTGGGTCCTTCAGAAGAGGCTGATGTTTTCACCAACTCTTCTGGAGCATGTGCTGCCTTTATTTCTAATACAGACGACAAAAATGACAAAACAGTAGTATTTCGTAACGTGTCATATCATCTACCAGCATGGTCAGTTAGCATACTGCCTGACTGCAAGACTGTAGTATTCAACACAGCAAAGGTAACATCCCAAACCTCTGTAGTTGAGATGGCATCTGAAAATAAAGGCTTGAAAGGTCTTAAATGGGAGGTATTCGTGGAGAAAGCTGGGATCTGGGGTGAAGCTGACTTTGTTAAAACTGGATTTGTAGATCACATCAATACCACAAAATTTACCACTGACTATCTGTGGTATACAACAAGCATATTTGTTGATGAAAATGAAGCGTTCTTAAAGAAAGGAAGCTCACCCGTTCTTCTAATTGAATCAAAAGGCCATGCTCTCCATGCTTTTGTCAATGATGAACTTCAAGATAGTGCATCTGGAAATGGCACACATCCACCCTTCACTTTAAAGAGTCCTATCTCTCTGAAGGCAGGGAAGAATGAAATTGCTCTACTCAGCATGACAGTTGGTCTGCAGAATGCTGGATCATTTTATGAGTGGGTAGGGGCAGGATTAACTAGTGTCAAGATTAAGGGTTTCAACAATGGTACAATTGATTTGTCTGCACATAATTGGACCTACAAGATTGGGGTGCAAGGAGAACACCTAGGACTTTACAAGAAAGATGGCTCAAGTAATGTAACTTGGGTTTCAACCTCAGACCCGCCAAAGAAACAACCTTTGACGTGGTATAAGGCTATTGTGGACCCTCCGCCAGGTGATGAACCTATTGGACTGGATATGATTGACATGGGAAAAGGTCTGGCTTGGTTGAATGGAGAAGAAATTGGAAGATACTGGCCTAGGAAGAGCCCTACACATGGATGTGTTCAAGAATGCAATTATAGAGGAAAATTTGATCCAGACAAATGCAATACAGGATGTGGAGAACCAACACAGAGATGGTACCATGTTCCACGGTCTTGGTTCAAACCATCTGGAAACGTTCTGGTGATATTTGAGGAGAAAGGTGGAGATCCATTGAAAATTGAGTTTTCGAGACGGAAAATCTCAGGTGCCTGTGCTCATGCTGCAGTAGATTACCCCTCTGTTGACCTTGAATCTTGGCGTGAGGAAAATGGAACTAACAAAAGCATTTCAACCATTAACTTGAAGTGCCCTGAGAACACACGTATATCTACTGTAAAATTTGCCAGCTTTGGAAATCCTACAGGCTCCTGTGGATCCTACACCAAAGGTGACTGCCACGATTCTAACTCCACTTCTGTGGTTGAAAAGATATGCTTAAACCAAAACAAATGTGCCATAGAATTGACAGAGGAGAAATTTAGCAGGGGTTTGTGTCCGAGTGTAACGAAGAAGCTTGCAGTTGAAGTAGTGTGCGGCTGA

Protein Analysis

835

Amino Acids

93.05

Weight (kDa)

6.61

Isoelectric Point (pI)

35.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_35 PF01301 28 - 332 4.3e-116 Glycosyl hydrolases family 35
GHD PF17834 356 - 412 8.2e-25 Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd PF21467 614 - 701 1.1e-20 Beta-galactosidase, galactose-binding domain
SUEL_Lectin PF02140 757 - 834 1.2e-17 D-galactoside/L-rhamnose binding SUEL lectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000093)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G09490
fragaria_vesca FvH4_1g23791 FvH4_2g01641 FvH4_2g04612 FvH4_2g06831 FvH4_2g07841 FvH4_2g13581 FvH4_2g27220 FvH4_2g30621 FvH4_2g34753 FvH4_3g10392 FvH4_3g24291 FvH4_3g25030 FvH4_3g29361 FvH4_3g31372 FvH4_3g32402 FvH4_3g43651 FvH4_4g03830 FvH4_4g05481 FvH4_4g20431 FvH4_4g21421 FvH4_4g25931 FvH4_5g08801 FvH4_5g21021 FvH4_5g26254 FvH4_5g30931 FvH4_5g31281 FvH4_5g33581 FvH4_5g35622 FvH4_6g02100 FvH4_6g07963 FvH4_6g11620 FvH4_6g16031 FvH4_6g19041 FvH4_6g24211 FvH4_6g24271 FvH4_6g30670 FvH4_6g49540 FvH4_7g25914
malus_domestica MD03G1245200.v1.1 MD04G1168000.v1.1 MD09G1242600.v1.1 MD15G1334000.v1.1 MD17G1165700.v1.1
prunus_persica Prupe.1G073500_v2.0.a1 Prupe.1G283700_v2.0.a1 Prupe.1G524100_v2.0.a1 Prupe.2G022700_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G044300_v2.0.a1 Prupe.2G048800_v2.0.a1 Prupe.2G092000_v2.0.a1 Prupe.2G216500_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.3G103400_v2.0.a1 Prupe.3G143300_v2.0.a1 Prupe.3G190000_v2.0.a1 Prupe.3G219800_v2.0.a1 Prupe.4G177800_v2.0.a1 Prupe.4G261300_v2.0.a1 Prupe.5G044600_v2.0.a1 Prupe.5G067400_v2.0.a1 Prupe.7G083900_v2.0.a1 Prupe.7G120900_v2.0.a1 Prupe.8G032200_v2.0.a1 Prupe.8G036100_v2.0.a1 Prupe.8G042700_v2.0.a1
pyrus_communis pycom01g21710 pycom02g19770 pycom03g05120 pycom05g01370 pycom05g08780 pycom05g10120 pycom07g01370 pycom07g05930 pycom08g15760 pycom08g18090 pycom08g21060 pycom09g03880 pycom10g03870 pycom13g22240 pycom16g05120 pycom16g17170 pycom17g12180 pycom17g16290 pycom17g21230 pycom17g24990 pycom215g00100
rosa_chinensis RchiOBHm_Chr1g0323031 RchiOBHm_Chr1g0324391 RchiOBHm_Chr1g0326401 RchiOBHm_Chr1g0327811 RchiOBHm_Chr1g0332521 RchiOBHm_Chr1g0336501 RchiOBHm_Chr1g0346021 RchiOBHm_Chr1g0347191 RchiOBHm_Chr1g0367181 RchiOBHm_Chr2g0089441 RchiOBHm_Chr2g0115441 RchiOBHm_Chr3g0490691 RchiOBHm_Chr4g0395251 RchiOBHm_Chr4g0398081 RchiOBHm_Chr4g0409451 RchiOBHm_Chr4g0413041 RchiOBHm_Chr4g0415471 RchiOBHm_Chr4g0420961 RchiOBHm_Chr5g0040301 RchiOBHm_Chr5g0070651 RchiOBHm_Chr6g0263011 RchiOBHm_Chr6g0270721 RchiOBHm_Chr6g0277111 RchiOBHm_Chr7g0179771 RchiOBHm_Chr7g0223051 RchiOBHm_Chr7g0225031 RchiOBHm_Chr7g0225091
rosa_laevigata RLG00000001668 RLG00000001672 RLG00000001676 RLG00000007762 RLG00000008994 RLG00000011117 RLG00000013729 RLG00000013839 RLG00000014759 RLG00000016638 RLG00000018535 RLG00000018614 RLG00000018646 RLG00000020679 RLG00000023337 RLG00000029348 RLG00000035891 RLG00000035912
rosa_multiflora Rmu_co8152500.1_g000001 Rmu_co8203314.1_g000001 Rmu_co8383183.1_g000001 Rmu_sc0000293.1_g000033 Rmu_sc0000367.1_g000226 Rmu_sc0000512.1_g000023 Rmu_sc0000594.1_g000059 Rmu_sc0000654.1_g000022 Rmu_sc0000654.1_g000047 Rmu_sc0000706.1_g000037 Rmu_sc0001348.1_g000008 Rmu_sc0001385.1_g000024 Rmu_sc0001405.1_g000002 Rmu_sc0001521.1_g000048 Rmu_sc0001932.1_g000008 Rmu_sc0001932.1_g000009 Rmu_sc0002535.1_g000011 Rmu_sc0002908.1_g000019 Rmu_sc0003709.1_g000004 Rmu_sc0003882.1_g000054 Rmu_sc0004035.1_g000007 Rmu_sc0004041.1_g000007 Rmu_sc0004288.1_g000011 Rmu_sc0004569.1_g000004 Rmu_sc0004677.1_g000016 Rmu_sc0004834.1_g000010 Rmu_sc0005193.1_g000008 Rmu_sc0005354.1_g000009 Rmu_sc0006514.1_g000021 Rmu_sc0006691.1_g000001 Rmu_sc0006888.1_g000021 Rmu_sc0006889.1_g000013 Rmu_sc0008096.1_g000017 Rmu_sc0008378.1_g000003 Rmu_sc0009127.1_g000005 Rmu_sc0009191.1_g000016 Rmu_sc0009687.1_g000018 Rmu_sc0009709.1_g000005 Rmu_sc0009880.1_g000015 Rmu_sc0011710.1_g000001 Rmu_sc0012615.1_g000004 Rmu_sc0016091.1_g000002 Rmu_sc0022339.1_g000006 Rmu_sc0026537.1_g000002 Rmu_sc0027689.1_g000002 Rmu_sc0036222.1_g000001 Rmu_sc0040890.1_g000001 Rmu_ssc0000148.1_g000006 Rmu_ssc0000151.1_g000017 Rmu_ssc0000404.1_g000018 Rmu_ssc0000449.1_g000009
rosa_roxburghii Rroxscaffold_1G00017760 Rroxscaffold_1G00059150 Rroxscaffold_2G00142560 Rroxscaffold_3G00220440 Rroxscaffold_3G00231700 Rroxscaffold_3G00232400 Rroxscaffold_3G00274510 Rroxscaffold_4G00288790 Rroxscaffold_4G00305680 Rroxscaffold_4G00314880 Rroxscaffold_4G00314900 Rroxscaffold_5G00334590 Rroxscaffold_6G00394110 Rroxscaffold_6G00415860 Rroxscaffold_7G00168240 Rroxscaffold_7G00204400 Rroxscaffold_7G00207840
rosa_rugosa Rorug01G0034900 Rorug02G0079500 Rorug02G0229000 Rorug02G0229100 Rorug02G0291400 Rorug02G0298800 Rorug03G0046400 Rorug03G0064700 Rorug03G0077300 Rorug03G0199000 Rorug03G0200400 Rorug04G0205200 Rorug05G0025400 Rorug05G0127400 Rorug05G0192100 Rorug05G0453400 Rorug05G0538300 Rorug06G0035200 Rorug06G0241000 Rorug06G0268300 Rorug07G0120300 Rorug07G0145000 Rorug07G0209100 Rorug07G0240500 Rorug07G0271700
rosa_samantha Rh1AG179100 Rh1BG106900 Rh1BG163400 Rh1BG163500 Rh1BG323500 Rh2CG447900 Rh2DG503700 Rh3AG293600 Rh3CG229100 Rh3DG221500 Rh4AG106000 Rh4BG267700 Rh4CG062500 Rh4CG090100 Rh4CG114800 Rh5AG038400 Rh5BG395400 Rh5CG441700 Rh5CG572000 Rh6AG222400 Rh6AG264500 Rh6BG137400 Rh6BG225700 Rh6CG144300 Rh6DG087600 Rh6DG096000 Rh6DG362400 Rh6DG390200 Rh7AG207500 Rh7AG324700 Rh7AG388800 Rh7AG437100 Rh7BG019000 Rh7BG374600 Rh7CG028700 Rh7CG341500 Rh7CG408000 Rh7CG408300 Rh7DG354600
rosa_wichuraiana Rw0G009630 Rw0G012170 Rw4G022700 Rw5G028420 Rw5G029490 Rw6G007220 Rw6G007410 Rw6G017880 Rw7G012440 Rw7G021830 Rw7G027490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 908
Acc65I GGTACC 2 cut(s) 367, 2064
AccB1I GGYRCC 4 cut(s) 367, 931, 2064, 2174
AccBSI CCGCTC 1 cut(s) 81
AccI GTMKAC 1 cut(s) 1406
AciI CCGC 6 cut(s) 79, 363, 886, 1823, 1871, 2502
AclI AACGTT 2 cut(s) 452, 2103
AclWI GGATC 7 cut(s) 638, 1331, 1651, 2012, 2129, 2337, 2350
AcoI YGGCCR 3 cut(s) 97, 158, 883
AcsI RAATTY 6 cut(s) 729, 877, 1382, 2012, 2306, 2444
AcuI CTGAAG 4 cut(s) 816, 876, 1044, 1604
AdeI CACNNNGTG 1 cut(s) 48
AfaI GTAC 5 cut(s) 356, 369, 846, 1708, 2066
AfiI CCNNNNNNNGG 4 cut(s) 242, 500, 1874, 1979
AflII CTTAAG 1 cut(s) 980
AflIII ACRYGT 4 cut(s) 674, 858, 1158, 2288
AhdI GACNNNNNGTC 1 cut(s) 1626
AhlI ACTAGT 1 cut(s) 1676
AjiI CACGTC 1 cut(s) 1845
AjnI CCWGG 3 cut(s) 241, 748, 1873
AjuI GAANNNNNNNTTGG 2 cut(s) 342, 374
AleI CACNNNNGTG 1 cut(s) 2384
Alw21I GWGCWC 1 cut(s) 2185
Alw26I GTCTC 3 cut(s) 200, 243, 2152
AlwI GGATC 7 cut(s) 638, 1331, 1651, 2012, 2129, 2337, 2350
AlwNI CAGNNNCTG 1 cut(s) 662
AoxI GGCC 9 cut(s) 97, 158, 331, 746, 771, 788, 883, 1486, 1958
ApeKI GCWGC 6 cut(s) 19, 109, 122, 344, 1103, 2189
ApoI RAATTY 6 cut(s) 729, 877, 1382, 2012, 2306, 2444
Asp718I GGTACC 2 cut(s) 367, 2064
AspA2I CCTAGG 2 cut(s) 1765, 1961
AspS9I GGNCC 7 cut(s) 332, 503, 771, 899, 1055, 1734, 1864
AsuC2I CCSGG 1 cut(s) 162
AsuHPI GGTGA 7 cut(s) 983, 1072, 1343, 1452, 1889, 2122, 2369
AsuII TTCGAA 2 cut(s) 325, 406
AsuNHI GCTAGC 1 cut(s) 593
AvaII GGWCC 5 cut(s) 503, 899, 1055, 1734, 1864
AvrII CCTAGG 2 cut(s) 1765, 1961
BaeGI GKGCMC 2 cut(s) 976, 2279
BaeI ACNNNNGTAYC 4 cut(s) 359, 392, 1029, 1062
BalI TGGCCA 1 cut(s) 99
BamHI GGATCC 1 cut(s) 2342
BanI GGYRCC 4 cut(s) 367, 931, 2064, 2174
BanII GRGCYC 2 cut(s) 423, 1973
Bbv12I GWGCWC 1 cut(s) 2185
BbvI GCAGC 6 cut(s) 6, 96, 109, 356, 1090, 2176
BccI CCATC 5 cut(s) 799, 1255, 1778, 2055, 2101
BceAI ACGGC 1 cut(s) 192
BciT130I CCWGG 3 cut(s) 243, 750, 1875
BciVI GTATCC 2 cut(s) 50, 533
BcnI CCSGG 1 cut(s) 162
BcoDI GTCTC 3 cut(s) 200, 243, 2152
BcuI ACTAGT 1 cut(s) 1676
BfaI CTAG 7 cut(s) 11, 167, 594, 995, 1677, 1766, 1962
BfmI CTRYAG 6 cut(s) 813, 1212, 1251, 1631, 2190, 2328
BfrI CTTAAG 1 cut(s) 980
BfuI GTATCC 2 cut(s) 50, 533
BisI GCNGC 9 cut(s) 20, 79, 110, 123, 345, 886, 1104, 2190, 2503
BlnI CCTAGG 2 cut(s) 1765, 1961
BlsI GCNGC 9 cut(s) 21, 80, 111, 124, 346, 887, 1105, 2191, 2504
Bme1390I CCNGG 4 cut(s) 162, 243, 750, 1875
Bme18I GGWCC 5 cut(s) 503, 899, 1055, 1734, 1864
BmeRI GACNNNNNGTC 1 cut(s) 1626
BmgBI CACGTC 1 cut(s) 1845
BmgT120I GGNCC 7 cut(s) 332, 503, 771, 899, 1055, 1734, 1864
BmiI GGNNCC 9 cut(s) 369, 772, 933, 1056, 1866, 2066, 2176, 2335, 2344
BmrFI CCNGG 4 cut(s) 162, 243, 750, 1875
BmsI GCATC 4 cut(s) 292, 640, 1274, 1541
BmtI GCTAGC 1 cut(s) 597
BpmI CTGGAG 3 cut(s) 225, 639, 1113
Bpu14I TTCGAA 2 cut(s) 325, 406
BpuEI CTTGAG 2 cut(s) 480, 1774
BpuMI CCSGG 1 cut(s) 162
Bsa29I ATCGAT 1 cut(s) 939
BsaAI YACGTR 1 cut(s) 2291
BsaJI CCNNGG 6 cut(s) 161, 626, 956, 1765, 1961, 2075
Bsc4I CCNNNNNNNGG 4 cut(s) 242, 500, 1874, 1979
Bse1I ACTGG 3 cut(s) 1357, 1899, 1961
BseBI CCWGG 3 cut(s) 243, 750, 1875
BseCI ATCGAT 1 cut(s) 939
BseDI CCNNGG 6 cut(s) 161, 626, 956, 1765, 1961, 2075
BseGI GGATG 5 cut(s) 307, 1238, 1549, 1988, 2045
BseLI CCNNNNNNNGG 4 cut(s) 242, 500, 1874, 1979
BseMII CTCAG 6 cut(s) 533, 623, 1627, 1830, 2184, 2271
BseNI ACTGG 3 cut(s) 1357, 1899, 1961
BseRI GAGGAG 2 cut(s) 2135, 2453
BseSI GKGCMC 2 cut(s) 976, 2279
BseXI GCAGC 6 cut(s) 6, 96, 109, 356, 1090, 2176
BseYI CCCAGC 1 cut(s) 1319
BsgI GTGCAG 1 cut(s) 1707
BshFI GGCC 9 cut(s) 99, 160, 333, 748, 773, 790, 885, 1488, 1960
BshNI GGYRCC 4 cut(s) 367, 931, 2064, 2174
BshVI ATCGAT 1 cut(s) 939
BsiHKAI GWGCWC 1 cut(s) 2185
BsiSI CCGG 1 cut(s) 161
BslFI GGGAC 1 cut(s) 131
BslI CCNNNNNNNGG 4 cut(s) 242, 500, 1874, 1979
BsmAI GTCTC 3 cut(s) 200, 243, 2152
BsmBI CGTCTC 2 cut(s) 243, 2152
BsmFI GGGAC 1 cut(s) 131
BsmI GAATGC 2 cut(s) 1642, 2000
BsnI GGCC 9 cut(s) 99, 160, 333, 748, 773, 790, 885, 1488, 1960
Bsp119I TTCGAA 2 cut(s) 325, 406
Bsp1286I GDGCHC 5 cut(s) 423, 976, 1973, 2185, 2279
Bsp1407I TGTACA 1 cut(s) 844
Bsp143I GATC 9 cut(s) 271, 291, 630, 1323, 1363, 1643, 2017, 2134, 2342
Bsp19I CCATGG 1 cut(s) 626
BspACI CCGC 6 cut(s) 79, 363, 886, 1823, 1871, 2502
BspANI GGCC 9 cut(s) 99, 160, 333, 748, 773, 790, 885, 1488, 1960
BspCNI CTCAG 6 cut(s) 532, 622, 1626, 1829, 2183, 2272
BspDI ATCGAT 1 cut(s) 939
BspHI TCATGA 1 cut(s) 229
BspLI GGNNCC 9 cut(s) 369, 772, 933, 1056, 1866, 2066, 2176, 2335, 2344
BspMAI CTGCAG 2 cut(s) 1635, 2194
BspOI GCTAGC 1 cut(s) 597
BspPI GGATC 7 cut(s) 638, 1331, 1651, 2012, 2129, 2337, 2350
BspQI GCTCTTC 1 cut(s) 1961
BspT104I TTCGAA 2 cut(s) 325, 406
BspT107I GGYRCC 4 cut(s) 367, 931, 2064, 2174
BspTI CTTAAG 1 cut(s) 980
BsrBI CCGCTC 1 cut(s) 81
BsrGI TGTACA 1 cut(s) 844
BsrI ACTGG 3 cut(s) 1357, 1899, 1961
BssECI CCNNGG 6 cut(s) 161, 626, 956, 1765, 1961, 2075
BssMI GATC 9 cut(s) 271, 291, 630, 1323, 1363, 1643, 2017, 2134, 2342
BssNAI GTATAC 1 cut(s) 1407
BssT1I CCWWGG 4 cut(s) 626, 956, 1765, 1961
Bst1107I GTATAC 1 cut(s) 1407
Bst2UI CCWGG 3 cut(s) 243, 750, 1875
Bst6I CTCTTC 3 cut(s) 1059, 1093, 1961
BstAFI CTTAAG 1 cut(s) 980
BstAPI GCANNNNNTGC 3 cut(s) 388, 1021, 1103
BstAUI TGTACA 1 cut(s) 844
BstBAI YACGTR 1 cut(s) 2291
BstBI TTCGAA 2 cut(s) 325, 406
BstC8I GCNNGC 4 cut(s) 595, 1017, 2314, 2484
BstDEI CTNAG 6 cut(s) 519, 609, 1613, 1816, 2170, 2280
BstDSI CCRYGG 2 cut(s) 626, 2075
BstENI CCTNNNNNAGG 2 cut(s) 498, 1872
BstF5I GGATG 5 cut(s) 307, 1238, 1549, 1988, 2045
BstKTI GATC 9 cut(s) 274, 294, 633, 1326, 1366, 1646, 2020, 2137, 2345
BstMAI GTCTC 3 cut(s) 200, 243, 2152
BstMBI GATC 9 cut(s) 271, 291, 630, 1323, 1363, 1643, 2017, 2134, 2342
BstMWI GCNNNNNNNGC 8 cut(s) 28, 75, 388, 599, 1021, 1103, 1499, 2189
BstNI CCWGG 3 cut(s) 243, 750, 1875
BstNSI RCATGY 5 cut(s) 439, 678, 862, 1019, 1101
BstSCI CCNGG 4 cut(s) 160, 241, 748, 1873
BstSFI CTRYAG 6 cut(s) 813, 1212, 1251, 1631, 2190, 2328
BstSLI GKGCMC 2 cut(s) 976, 2279
BstV1I GCAGC 6 cut(s) 6, 96, 109, 356, 1090, 2176
BstX2I RGATCY 3 cut(s) 1323, 2134, 2342
BstXI CCANNNNNNTGG 3 cut(s) 836, 2082, 2386
BstYI RGATCY 3 cut(s) 1323, 2134, 2342
BstZ17I GTATAC 1 cut(s) 1407
Bsu15I ATCGAT 1 cut(s) 939
BsuI GTATCC 2 cut(s) 50, 533
BsuRI GGCC 9 cut(s) 99, 160, 333, 748, 773, 790, 885, 1488, 1960
BsuTUI ATCGAT 1 cut(s) 939
BtgI CCRYGG 2 cut(s) 626, 2075
BtgZI GCGATG 1 cut(s) 167
BtrI CACGTC 1 cut(s) 1845
BtsCI GGATG 5 cut(s) 307, 1238, 1549, 1988, 2045
BtsI GCAGTG 1 cut(s) 847
BtsIMutI CAGTG 5 cut(s) 396, 590, 847, 1036, 1389
Cac8I GCNNGC 4 cut(s) 595, 1017, 2314, 2484
CaiI CAGNNNCTG 1 cut(s) 662
CciI TCATGA 1 cut(s) 229
Cfr13I GGNCC 7 cut(s) 332, 503, 771, 899, 1055, 1734, 1864
ClaI ATCGAT 1 cut(s) 939
Csp6I GTAC 5 cut(s) 355, 368, 845, 1707, 2065
CviQI GTAC 5 cut(s) 355, 368, 845, 1707, 2065
DdeI CTNAG 6 cut(s) 519, 609, 1613, 1816, 2170, 2280
DpnI GATC 9 cut(s) 273, 293, 632, 1325, 1365, 1645, 2019, 2136, 2344
DpnII GATC 9 cut(s) 271, 291, 630, 1323, 1363, 1643, 2017, 2134, 2342
DraI TTTAAA 2 cut(s) 760, 1566
DraIII CACNNNGTG 1 cut(s) 48
DriI GACNNNNNGTC 1 cut(s) 1626
EaeI YGGCCR 3 cut(s) 97, 158, 883
Eam1104I CTCTTC 3 cut(s) 1059, 1093, 1961
Eam1105I GACNNNNNGTC 1 cut(s) 1626
EarI CTCTTC 3 cut(s) 1059, 1093, 1961
EciI GGCGGA 1 cut(s) 1860
Eco130I CCWWGG 4 cut(s) 626, 956, 1765, 1961
Eco24I GRGCYC 2 cut(s) 423, 1973
Eco47I GGWCC 5 cut(s) 503, 899, 1055, 1734, 1864
Eco57I CTGAAG 4 cut(s) 816, 876, 1044, 1604
EcoNI CCTNNNNNAGG 2 cut(s) 498, 1872
EcoO109I RGGNCCY 1 cut(s) 1055
EcoRII CCWGG 3 cut(s) 241, 748, 1873
EcoT14I CCWWGG 4 cut(s) 626, 956, 1765, 1961
EcoT38I GRGCYC 2 cut(s) 423, 1973
ErhI CCWWGG 4 cut(s) 626, 956, 1765, 1961
Esp3I CGTCTC 2 cut(s) 243, 2152
FalI AAGNNNNNCTT 2 cut(s) 2387, 2419
FaqI GGGAC 1 cut(s) 131
FauI CCCGC 2 cut(s) 356, 1830
FauNDI CATATG 1 cut(s) 211
FblI GTMKAC 1 cut(s) 1406
Fnu4HI GCNGC 9 cut(s) 20, 79, 110, 123, 345, 886, 1104, 2190, 2503
FokI GGATG 5 cut(s) 314, 1225, 1536, 1995, 2052
FriOI GRGCYC 2 cut(s) 423, 1973
Fsp4HI GCNGC 9 cut(s) 20, 79, 110, 123, 345, 886, 1104, 2190, 2503
FspBI CTAG 7 cut(s) 11, 167, 594, 995, 1677, 1766, 1962
GluI GCNGC 9 cut(s) 20, 79, 110, 123, 345, 886, 1104, 2190, 2503
GsaI CCCAGC 1 cut(s) 1323
GsuI CTGGAG 3 cut(s) 225, 639, 1113
HaeIII GGCC 9 cut(s) 99, 160, 333, 748, 773, 790, 885, 1488, 1960
HapII CCGG 1 cut(s) 161
HincII GTYRAC 1 cut(s) 2212
HindII GTYRAC 1 cut(s) 2212
HindIII AAGCTT 2 cut(s) 482, 2480
HinfI GANTC 6 cut(s) 319, 659, 1478, 1570, 2219, 2369
HpaII CCGG 1 cut(s) 161
HphI GGTGA 7 cut(s) 983, 1072, 1343, 1452, 1889, 2122, 2369
Hpy166II GTNNAC 7 cut(s) 447, 845, 899, 1034, 1407, 1864, 2212
Hpy8I GTNNAC 7 cut(s) 447, 845, 899, 1034, 1407, 1864, 2212
HpyAV CCTTC 5 cut(s) 179, 694, 1068, 1567, 1579
HpyCH4IV ACGT 5 cut(s) 452, 1158, 1844, 2103, 2290
HpyF10VI GCNNNNNNNGC 8 cut(s) 28, 75, 388, 599, 1021, 1103, 1499, 2189
HpyF3I CTNAG 6 cut(s) 519, 609, 1613, 1816, 2170, 2280
HpySE526I ACGT 5 cut(s) 452, 1158, 1844, 2103, 2290
KpnI GGTACC 2 cut(s) 371, 2068
Kzo9I GATC 9 cut(s) 271, 291, 630, 1323, 1363, 1643, 2017, 2134, 2342
LguI GCTCTTC 1 cut(s) 1961
LmnI GCTCC 3 cut(s) 658, 1094, 2339
Lsp1109I GCAGC 6 cut(s) 6, 96, 109, 356, 1090, 2176
LweI GCATC 4 cut(s) 292, 640, 1274, 1541
MaeI CTAG 7 cut(s) 11, 167, 594, 995, 1677, 1766, 1962
MaeII ACGT 5 cut(s) 452, 1158, 1844, 2103, 2290
MaeIII GTNAC 7 cut(s) 677, 692, 1154, 1234, 1798, 2357, 2470
MalI GATC 9 cut(s) 273, 293, 632, 1325, 1365, 1645, 2019, 2136, 2344
MbiI CCGCTC 1 cut(s) 81
MboI GATC 9 cut(s) 271, 291, 630, 1323, 1363, 1643, 2017, 2134, 2342
MfeI CAATTG 1 cut(s) 1710
MflI RGATCY 3 cut(s) 1323, 2134, 2342
MhlI GDGCHC 5 cut(s) 423, 976, 1973, 2185, 2279
MlsI TGGCCA 1 cut(s) 99
MluNI TGGCCA 1 cut(s) 99
MlyI GAGTC 2 cut(s) 668, 1579
Mox20I TGGCCA 1 cut(s) 99
MscI TGGCCA 1 cut(s) 99
MslI CAYNNNNRTG 4 cut(s) 1981, 1983, 2059, 2384
Msp20I TGGCCA 1 cut(s) 99
MspCI CTTAAG 1 cut(s) 980
MspI CCGG 1 cut(s) 161
MspR9I CCNGG 4 cut(s) 162, 243, 750, 1875
MunI CAATTG 1 cut(s) 1710
Mva1269I GAATGC 2 cut(s) 1642, 2000
MvaI CCWGG 3 cut(s) 243, 750, 1875
MwoI GCNNNNNNNGC 8 cut(s) 28, 75, 388, 599, 1021, 1103, 1499, 2189
NciI CCSGG 1 cut(s) 162
NcoI CCATGG 1 cut(s) 626
NdeI CATATG 1 cut(s) 211
NdeII GATC 9 cut(s) 271, 291, 630, 1323, 1363, 1643, 2017, 2134, 2342
NheI GCTAGC 1 cut(s) 593
NlaIV GGNNCC 9 cut(s) 369, 772, 933, 1056, 1866, 2066, 2176, 2335, 2344
NmuCI GTSAC 2 cut(s) 692, 2357
NspI RCATGY 5 cut(s) 439, 678, 862, 1019, 1101
NspV TTCGAA 2 cut(s) 325, 406
OliI CACNNNNGTG 1 cut(s) 2384
PaeI GCATGC 1 cut(s) 1019
PagI TCATGA 1 cut(s) 229
PciI ACATGT 2 cut(s) 674, 858
PciSI GCTCTTC 1 cut(s) 1961
PctI GAATGC 2 cut(s) 1642, 2000
PfeI GAWTC 4 cut(s) 319, 1478, 2219, 2369
PkrI GCNGC 9 cut(s) 21, 80, 111, 124, 346, 887, 1105, 2191, 2504
PleI GAGTC 2 cut(s) 667, 1578
PpsI GAGTC 2 cut(s) 667, 1578
Ppu21I YACGTR 1 cut(s) 2291
PpuMI RGGWCCY 1 cut(s) 1055
PscI ACATGT 2 cut(s) 674, 858
PsiI TTATAA 1 cut(s) 908
Psp1406I AACGTT 2 cut(s) 452, 2103
Psp5II RGGWCCY 1 cut(s) 1055
Psp6I CCWGG 3 cut(s) 241, 748, 1873
PspFI CCCAGC 1 cut(s) 1319
PspGI CCWGG 3 cut(s) 241, 748, 1873
PspN4I GGNNCC 9 cut(s) 369, 772, 933, 1056, 1866, 2066, 2176, 2335, 2344
PspPI GGNCC 7 cut(s) 332, 503, 771, 899, 1055, 1734, 1864
PspPPI RGGWCCY 1 cut(s) 1055
PstI CTGCAG 2 cut(s) 1635, 2194
PstNI CAGNNNCTG 1 cut(s) 662
PsuI RGATCY 3 cut(s) 1323, 2134, 2342
RsaI GTAC 5 cut(s) 356, 369, 846, 1708, 2066
RsaNI GTAC 5 cut(s) 355, 368, 845, 1707, 2065
RseI CAYNNNNRTG 4 cut(s) 1981, 1983, 2059, 2384
SapI GCTCTTC 1 cut(s) 1961
SatI GCNGC 9 cut(s) 20, 79, 110, 123, 345, 886, 1104, 2190, 2503
Sau3AI GATC 9 cut(s) 271, 291, 630, 1323, 1363, 1643, 2017, 2134, 2342
Sau96I GGNCC 7 cut(s) 332, 503, 771, 899, 1055, 1734, 1864
SchI GAGTC 2 cut(s) 668, 1579
ScrFI CCNGG 4 cut(s) 162, 243, 750, 1875
SduI GDGCHC 5 cut(s) 423, 976, 1973, 2185, 2279
SfaNI GCATC 4 cut(s) 292, 640, 1274, 1541
SfcI CTRYAG 6 cut(s) 813, 1212, 1251, 1631, 2190, 2328
SfuI TTCGAA 2 cut(s) 325, 406
SinI GGWCC 5 cut(s) 503, 899, 1055, 1734, 1864
SmiMI CAYNNNNRTG 4 cut(s) 1981, 1983, 2059, 2384
SmlI CTYRAG 3 cut(s) 495, 980, 1789
SmoI CTYRAG 3 cut(s) 495, 980, 1789
SpeI ACTAGT 1 cut(s) 1676
SphI GCATGC 1 cut(s) 1019
SsiI CCGC 6 cut(s) 79, 363, 886, 1823, 1871, 2502
SspMI CTAG 7 cut(s) 11, 167, 594, 995, 1677, 1766, 1962
StyD4I CCNGG 4 cut(s) 160, 241, 748, 1873
StyI CCWWGG 4 cut(s) 626, 956, 1765, 1961
TaiI ACGT 5 cut(s) 455, 1161, 1847, 2106, 2293
TaqI TCGA 4 cut(s) 325, 406, 939, 2156
TatI WGTACW 1 cut(s) 844
TauI GCSGC 3 cut(s) 81, 888, 2505
TfiI GAWTC 4 cut(s) 319, 1478, 2219, 2369
TscAI CASTG 5 cut(s) 403, 590, 847, 1036, 1396
TseFI GTSAC 2 cut(s) 692, 2357
TseI GCWGC 6 cut(s) 19, 109, 122, 344, 1103, 2189
Tsp45I GTSAC 2 cut(s) 692, 2357
TspGWI ACGGA 1 cut(s) 2176
TspRI CASTG 5 cut(s) 403, 590, 847, 1036, 1396
Vha464I CTTAAG 1 cut(s) 980
VpaK11BI GGWCC 5 cut(s) 503, 899, 1055, 1734, 1864
XagI CCTNNNNNAGG 2 cut(s) 498, 1872
XapI RAATTY 6 cut(s) 729, 877, 1382, 2012, 2306, 2444
XceI RCATGY 5 cut(s) 439, 678, 862, 1019, 1101
XcmI CCANNNNNNNNNTGG 1 cut(s) 2058
XmaJI CCTAGG 2 cut(s) 1765, 1961
XmiI GTMKAC 1 cut(s) 1406
XspI CTAG 7 cut(s) 11, 167, 594, 995, 1677, 1766, 1962
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.