FvH4_6g16031

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000093
Physical Location & Seq
Forward (+)
10038329 .. 10039698
1370 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g16031.t1

Sequence Viewer

Length: 1272 bp
ATGGGGTGTTGGCATGTTATTAACGGTTCATCTATAAATTTATGGAAGGATCAGTGGTTACCACCTCCCAATATAGGCTGTATACAAACTATTGCTCCTATTCCAGATGATGCCCCAACACTGGTCAGTGATTTAATCGTCAGAGAAAGCAGGTTGATATGGCCCTTATCTAAGAATGGCAAGTATTCTGTTTCAAGTGGTTATCATTGGGTTCATAGTCATCTCACTACAGGATCAAGTTCTTCCATAAGCAACACTTCTCATATCATCAGTGCAAAATGTTGGAAAATGCTTTGGGGTTTGAAAACCTTACCAAAAATCAAATTTTTTCTCTGGAAGTGTTTGAATGGTGCAGCCGCCTCTTTTCCCAATCTTTTTCACAGGAAACTGTCTCAATCCCCAATCTGCCCTCTTTGTGGTGCTTTTGATGAGTCAATTGAGCACATCCTGTTATTATGCCATTGGGTTGACCCAATTTGGTATAGGTCTCCTCAGTGCTTGAGAATAGATAAGAGAAAGGTTATTACTTTGGACAAATGGCTGCAAGATTCTATTATGAAACACAGCATTGAGAGTGACAGGGTTTGGTGCGGTACCTTGATTAGCTTTATTTGCTGGTCAATCTGGAAAGCTAGATGCTGCTTCGTTTATCAATATGAATCACCTTCTCCTATTTGTGTGCTTCAAAAGGGAATCATGGCAGCTTTTGAATTCATCAACTCATGCTCTAAAGAAAATGTGAAAACAAAGAGCAATGGAGTTTTGAAATGGACTCACCCTCCTGAGGGAGTGACTGCTATTAATTGTGATGCAGCCTGGTCTGATGAGAATAATGGGGGTTTGGGAGTAGCTCTCCGCAACCATGAAGGAGTTTGTATCGGAGGGGCTCATGGGCAAGCCTTTCTGTCTTCTGTAGAGGCTGCTGAAGCCACAGCAATACTGCTGGGAGTAAATGTTGCTTTGGATATGGGACTGAAAGATGTAATTGTTCAGTCTGATTCTCTAAGTATAATCACAGAACTCAACTCTTCTAGCTCATGCAAAAATTGGAAGATTACTCAGATTATTGATGATATCAAATGGAAGAAGGTTTTTTTCAATTCCATTACCTGGGACTGGATTCCCCGTGAAGCAAACCAAGTTGCAGATGCTGCAGCTTTGCTTGGAAAAAGGATGATGGGTCTTAACCGATGGGTCAACCGGCCACCATCATCTCTCTTGAGTGTACTCCGGAACGACGGTTTGCCATGTCCACCGTTGGTGGCAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_3 zf-RVT

Protein Analysis

424

Amino Acids

47.14

Weight (kDa)

8.57

Isoelectric Point (pI)

44.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RVT PF13966 89 - 160 7.3e-13 zinc-binding in reverse transcriptase
RVT_3 PF13456 268 - 386 4.2e-25 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000093)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G09490
fragaria_vesca FvH4_1g23791 FvH4_2g01641 FvH4_2g04612 FvH4_2g06831 FvH4_2g07841 FvH4_2g13581 FvH4_2g27220 FvH4_2g30621 FvH4_2g34753 FvH4_3g10392 FvH4_3g24291 FvH4_3g25030 FvH4_3g29361 FvH4_3g31372 FvH4_3g32402 FvH4_3g43651 FvH4_4g03830 FvH4_4g05481 FvH4_4g20431 FvH4_4g21421 FvH4_4g25931 FvH4_5g08801 FvH4_5g21021 FvH4_5g26254 FvH4_5g30931 FvH4_5g31281 FvH4_5g33581 FvH4_5g35622 FvH4_6g02100 FvH4_6g07963 FvH4_6g11620 FvH4_6g16031 FvH4_6g19041 FvH4_6g24211 FvH4_6g24271 FvH4_6g30670 FvH4_6g49540 FvH4_7g25914
malus_domestica MD03G1245200.v1.1 MD04G1168000.v1.1 MD09G1242600.v1.1 MD15G1334000.v1.1 MD17G1165700.v1.1
prunus_persica Prupe.1G073500_v2.0.a1 Prupe.1G283700_v2.0.a1 Prupe.1G524100_v2.0.a1 Prupe.2G022700_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G044300_v2.0.a1 Prupe.2G048800_v2.0.a1 Prupe.2G092000_v2.0.a1 Prupe.2G216500_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.3G103400_v2.0.a1 Prupe.3G143300_v2.0.a1 Prupe.3G190000_v2.0.a1 Prupe.3G219800_v2.0.a1 Prupe.4G177800_v2.0.a1 Prupe.4G261300_v2.0.a1 Prupe.5G044600_v2.0.a1 Prupe.5G067400_v2.0.a1 Prupe.7G083900_v2.0.a1 Prupe.7G120900_v2.0.a1 Prupe.8G032200_v2.0.a1 Prupe.8G036100_v2.0.a1 Prupe.8G042700_v2.0.a1
pyrus_communis pycom01g21710 pycom02g19770 pycom03g05120 pycom05g01370 pycom05g08780 pycom05g10120 pycom07g01370 pycom07g05930 pycom08g15760 pycom08g18090 pycom08g21060 pycom09g03880 pycom10g03870 pycom13g22240 pycom16g05120 pycom16g17170 pycom17g12180 pycom17g16290 pycom17g21230 pycom17g24990 pycom215g00100
rosa_chinensis RchiOBHm_Chr1g0323031 RchiOBHm_Chr1g0324391 RchiOBHm_Chr1g0326401 RchiOBHm_Chr1g0327811 RchiOBHm_Chr1g0332521 RchiOBHm_Chr1g0336501 RchiOBHm_Chr1g0346021 RchiOBHm_Chr1g0347191 RchiOBHm_Chr1g0367181 RchiOBHm_Chr2g0089441 RchiOBHm_Chr2g0115441 RchiOBHm_Chr3g0490691 RchiOBHm_Chr4g0395251 RchiOBHm_Chr4g0398081 RchiOBHm_Chr4g0409451 RchiOBHm_Chr4g0413041 RchiOBHm_Chr4g0415471 RchiOBHm_Chr4g0420961 RchiOBHm_Chr5g0040301 RchiOBHm_Chr5g0070651 RchiOBHm_Chr6g0263011 RchiOBHm_Chr6g0270721 RchiOBHm_Chr6g0277111 RchiOBHm_Chr7g0179771 RchiOBHm_Chr7g0223051 RchiOBHm_Chr7g0225031 RchiOBHm_Chr7g0225091
rosa_laevigata RLG00000001668 RLG00000001672 RLG00000001676 RLG00000007762 RLG00000008994 RLG00000011117 RLG00000013729 RLG00000013839 RLG00000014759 RLG00000016638 RLG00000018535 RLG00000018614 RLG00000018646 RLG00000020679 RLG00000023337 RLG00000029348 RLG00000035891 RLG00000035912
rosa_multiflora Rmu_co8152500.1_g000001 Rmu_co8203314.1_g000001 Rmu_co8383183.1_g000001 Rmu_sc0000293.1_g000033 Rmu_sc0000367.1_g000226 Rmu_sc0000512.1_g000023 Rmu_sc0000594.1_g000059 Rmu_sc0000654.1_g000022 Rmu_sc0000654.1_g000047 Rmu_sc0000706.1_g000037 Rmu_sc0001348.1_g000008 Rmu_sc0001385.1_g000024 Rmu_sc0001405.1_g000002 Rmu_sc0001521.1_g000048 Rmu_sc0001932.1_g000008 Rmu_sc0001932.1_g000009 Rmu_sc0002535.1_g000011 Rmu_sc0002908.1_g000019 Rmu_sc0003709.1_g000004 Rmu_sc0003882.1_g000054 Rmu_sc0004035.1_g000007 Rmu_sc0004041.1_g000007 Rmu_sc0004288.1_g000011 Rmu_sc0004569.1_g000004 Rmu_sc0004677.1_g000016 Rmu_sc0004834.1_g000010 Rmu_sc0005193.1_g000008 Rmu_sc0005354.1_g000009 Rmu_sc0006514.1_g000021 Rmu_sc0006691.1_g000001 Rmu_sc0006888.1_g000021 Rmu_sc0006889.1_g000013 Rmu_sc0008096.1_g000017 Rmu_sc0008378.1_g000003 Rmu_sc0009127.1_g000005 Rmu_sc0009191.1_g000016 Rmu_sc0009687.1_g000018 Rmu_sc0009709.1_g000005 Rmu_sc0009880.1_g000015 Rmu_sc0011710.1_g000001 Rmu_sc0012615.1_g000004 Rmu_sc0016091.1_g000002 Rmu_sc0022339.1_g000006 Rmu_sc0026537.1_g000002 Rmu_sc0027689.1_g000002 Rmu_sc0036222.1_g000001 Rmu_sc0040890.1_g000001 Rmu_ssc0000148.1_g000006 Rmu_ssc0000151.1_g000017 Rmu_ssc0000404.1_g000018 Rmu_ssc0000449.1_g000009
rosa_roxburghii Rroxscaffold_1G00017760 Rroxscaffold_1G00059150 Rroxscaffold_2G00142560 Rroxscaffold_3G00220440 Rroxscaffold_3G00231700 Rroxscaffold_3G00232400 Rroxscaffold_3G00274510 Rroxscaffold_4G00288790 Rroxscaffold_4G00305680 Rroxscaffold_4G00314880 Rroxscaffold_4G00314900 Rroxscaffold_5G00334590 Rroxscaffold_6G00394110 Rroxscaffold_6G00415860 Rroxscaffold_7G00168240 Rroxscaffold_7G00204400 Rroxscaffold_7G00207840
rosa_rugosa Rorug01G0034900 Rorug02G0079500 Rorug02G0229000 Rorug02G0229100 Rorug02G0291400 Rorug02G0298800 Rorug03G0046400 Rorug03G0064700 Rorug03G0077300 Rorug03G0199000 Rorug03G0200400 Rorug04G0205200 Rorug05G0025400 Rorug05G0127400 Rorug05G0192100 Rorug05G0453400 Rorug05G0538300 Rorug06G0035200 Rorug06G0241000 Rorug06G0268300 Rorug07G0120300 Rorug07G0145000 Rorug07G0209100 Rorug07G0240500 Rorug07G0271700
rosa_samantha Rh1AG179100 Rh1BG106900 Rh1BG163400 Rh1BG163500 Rh1BG323500 Rh2CG447900 Rh2DG503700 Rh3AG293600 Rh3CG229100 Rh3DG221500 Rh4AG106000 Rh4BG267700 Rh4CG062500 Rh4CG090100 Rh4CG114800 Rh5AG038400 Rh5BG395400 Rh5CG441700 Rh5CG572000 Rh6AG222400 Rh6AG264500 Rh6BG137400 Rh6BG225700 Rh6CG144300 Rh6DG087600 Rh6DG096000 Rh6DG362400 Rh6DG390200 Rh7AG207500 Rh7AG324700 Rh7AG388800 Rh7AG437100 Rh7BG019000 Rh7BG374600 Rh7CG028700 Rh7CG341500 Rh7CG408000 Rh7CG408300 Rh7DG354600
rosa_wichuraiana Rw0G009630 Rw0G012170 Rw4G022700 Rw5G028420 Rw5G029490 Rw6G007220 Rw6G007410 Rw6G017880 Rw7G012440 Rw7G021830 Rw7G027490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 141
Acc65I GGTACC 1 cut(s) 593
AccB1I GGYRCC 1 cut(s) 593
AccB7I CCANNNNNTGG 1 cut(s) 1110
AccI GTMKAC 1 cut(s) 82
AccIII TCCGGA 1 cut(s) 1230
AciI CCGC 3 cut(s) 357, 591, 856
AclWI GGATC 2 cut(s) 57, 241
AcoI YGGCCR 1 cut(s) 1202
AcsI RAATTY 3 cut(s) 37, 323, 710
AcuI CTGAAG 1 cut(s) 945
AfaI GTAC 2 cut(s) 595, 1227
AfiI CCNNNNNNNGG 7 cut(s) 74, 121, 416, 784, 785, 1110, 1116
AgsI TTSAA 7 cut(s) 195, 304, 346, 686, 710, 766, 1099
AjnI CCWGG 2 cut(s) 815, 1109
AluBI AGCT 6 cut(s) 606, 632, 704, 851, 1035, 1157
AluI AGCT 6 cut(s) 606, 632, 704, 851, 1035, 1157
Alw21I GWGCWC 1 cut(s) 444
Alw26I GTCTC 2 cut(s) 396, 492
AlwI GGATC 2 cut(s) 57, 241
AlwNI CAGNNNCTG 1 cut(s) 1151
Aor13HI TCCGGA 1 cut(s) 1230
AoxI GGCC 2 cut(s) 161, 1202
ApeKI GCWGC 8 cut(s) 353, 541, 639, 701, 812, 920, 1151, 1154
ApoI RAATTY 3 cut(s) 37, 323, 710
AseI ATTAAT 1 cut(s) 801
Asp718I GGTACC 1 cut(s) 593
AspS9I GGNCC 1 cut(s) 162
AsuHPI GGTGA 2 cut(s) 654, 767
AxyI CCTNAGG 1 cut(s) 783
BanI GGYRCC 1 cut(s) 593
BanII GRGCYC 1 cut(s) 889
BbsI GAAGAC 1 cut(s) 900
Bbv12I GWGCWC 1 cut(s) 444
BbvI GCAGC 8 cut(s) 365, 528, 626, 713, 824, 907, 1138, 1166
BccI CCATC 3 cut(s) 1171, 1185, 1216
BciT130I CCWGG 2 cut(s) 817, 1111
BcoDI GTCTC 2 cut(s) 396, 492
BfaI CTAG 2 cut(s) 633, 1032
BfmI CTRYAG 3 cut(s) 228, 912, 1152
BfuAI ACCTGC 1 cut(s) 141
BisI GCNGC 9 cut(s) 354, 357, 542, 640, 702, 813, 921, 1152, 1155
BlsI GCNGC 9 cut(s) 355, 358, 543, 641, 703, 814, 922, 1153, 1156
Bme1390I CCNGG 2 cut(s) 817, 1111
BmgT120I GGNCC 1 cut(s) 162
BmiI GGNNCC 1 cut(s) 595
BmrFI CCNGG 2 cut(s) 817, 1111
BmsI GCATC 4 cut(s) 100, 626, 799, 1138
BpiI GAAGAC 1 cut(s) 900
BplI GAGNNNNNCTC 2 cut(s) 837, 869
BpuEI CTTGAG 2 cut(s) 520, 1240
BsaI GGTCTC 1 cut(s) 492
BsaJI CCNNGG 1 cut(s) 1110
BsaWI WCCGGW 1 cut(s) 1230
BsaXI ACNNNNNCTCC 6 cut(s) 79, 109, 763, 793, 939, 969
Bsc4I CCNNNNNNNGG 7 cut(s) 74, 121, 416, 784, 785, 1110, 1116
Bse118I RCCGGY 1 cut(s) 1200
Bse1I ACTGG 2 cut(s) 126, 1121
Bse21I CCTNAGG 1 cut(s) 783
Bse3DI GCAATG 1 cut(s) 760
BseAI TCCGGA 1 cut(s) 1230
BseBI CCWGG 2 cut(s) 817, 1111
BseDI CCNNGG 1 cut(s) 1110
BseGI GGATG 2 cut(s) 444, 1179
BseLI CCNNNNNNNGG 7 cut(s) 74, 121, 416, 784, 785, 1110, 1116
BseMI GCAATG 1 cut(s) 760
BseMII CTCAG 3 cut(s) 506, 774, 1073
BseNI ACTGG 2 cut(s) 126, 1121
BseRI GAGGAG 1 cut(s) 480
BseXI GCAGC 8 cut(s) 365, 528, 626, 713, 824, 907, 1138, 1166
BseYI CCCAGC 1 cut(s) 943
BsgI GTGCAG 1 cut(s) 372
BshFI GGCC 2 cut(s) 163, 1204
BshNI GGYRCC 1 cut(s) 593
BsiHKAI GWGCWC 1 cut(s) 444
BsiSI CCGG 2 cut(s) 1201, 1231
BslFI GGGAC 2 cut(s) 984, 1127
BslI CCNNNNNNNGG 7 cut(s) 74, 121, 416, 784, 785, 1110, 1116
BsmAI GTCTC 2 cut(s) 396, 492
BsmFI GGGAC 2 cut(s) 984, 1127
BsnI GGCC 2 cut(s) 163, 1204
Bso31I GGTCTC 1 cut(s) 492
Bsp1286I GDGCHC 2 cut(s) 444, 889
Bsp13I TCCGGA 1 cut(s) 1230
Bsp143I GATC 2 cut(s) 49, 233
BspACI CCGC 3 cut(s) 357, 591, 856
BspANI GGCC 2 cut(s) 163, 1204
BspCNI CTCAG 3 cut(s) 505, 775, 1072
BspEI TCCGGA 1 cut(s) 1230
BspLI GGNNCC 1 cut(s) 595
BspMAI CTGCAG 1 cut(s) 1156
BspMI ACCTGC 1 cut(s) 141
BspPI GGATC 2 cut(s) 57, 241
BspT107I GGYRCC 1 cut(s) 593
BspTNI GGTCTC 1 cut(s) 492
BsrDI GCAATG 1 cut(s) 760
BsrFI RCCGGY 1 cut(s) 1200
BsrI ACTGG 2 cut(s) 126, 1121
BssAI RCCGGY 1 cut(s) 1200
BssECI CCNNGG 1 cut(s) 1110
BssMI GATC 2 cut(s) 49, 233
BssNAI GTATAC 1 cut(s) 83
Bst1107I GTATAC 1 cut(s) 83
Bst2UI CCWGG 2 cut(s) 817, 1111
Bst4CI ACNGT 4 cut(s) 26, 390, 1241, 1257
Bst6I CTCTTC 1 cut(s) 1033
BstAPI GCANNNNNTGC 1 cut(s) 1151
BstC8I GCNNGC 1 cut(s) 897
BstDEI CTNAG 5 cut(s) 171, 492, 783, 1004, 1059
BstEII GGTNACC 1 cut(s) 57
BstF5I GGATG 2 cut(s) 444, 1179
BstKTI GATC 2 cut(s) 52, 236
BstMAI GTCTC 2 cut(s) 396, 492
BstMBI GATC 2 cut(s) 49, 233
BstMWI GCNNNNNNNGC 3 cut(s) 612, 926, 1151
BstNI CCWGG 2 cut(s) 817, 1111
BstNSI RCATGY 1 cut(s) 17
BstPI GGTNACC 1 cut(s) 57
BstSCI CCNGG 2 cut(s) 815, 1109
BstSFI CTRYAG 3 cut(s) 228, 912, 1152
BstV1I GCAGC 8 cut(s) 365, 528, 626, 713, 824, 907, 1138, 1166
BstV2I GAAGAC 1 cut(s) 900
BstZ17I GTATAC 1 cut(s) 83
Bsu36I CCTNAGG 1 cut(s) 783
BsuRI GGCC 2 cut(s) 163, 1204
BtsCI GGATG 2 cut(s) 444, 1179
BtsIMutI CAGTG 5 cut(s) 59, 119, 133, 277, 500
BveI ACCTGC 1 cut(s) 141
Cac8I GCNNGC 1 cut(s) 897
CaiI CAGNNNCTG 1 cut(s) 1151
Cfr10I RCCGGY 1 cut(s) 1200
Cfr13I GGNCC 1 cut(s) 162
Csp6I GTAC 2 cut(s) 594, 1226
CviAII CATG 7 cut(s) 14, 697, 723, 863, 890, 1038, 1248
CviQI GTAC 2 cut(s) 594, 1226
DdeI CTNAG 5 cut(s) 171, 492, 783, 1004, 1059
DpnI GATC 2 cut(s) 51, 235
DpnII GATC 2 cut(s) 49, 233
EaeI YGGCCR 1 cut(s) 1202
Eam1104I CTCTTC 1 cut(s) 1033
EarI CTCTTC 1 cut(s) 1033
Eco24I GRGCYC 1 cut(s) 889
Eco31I GGTCTC 1 cut(s) 492
Eco32I GATATC 1 cut(s) 1075
Eco57I CTGAAG 1 cut(s) 945
Eco81I CCTNAGG 1 cut(s) 783
Eco91I GGTNACC 1 cut(s) 57
EcoO65I GGTNACC 1 cut(s) 57
EcoRI GAATTC 1 cut(s) 710
EcoRII CCWGG 2 cut(s) 815, 1109
EcoRV GATATC 1 cut(s) 1075
EcoT38I GRGCYC 1 cut(s) 889
FaeI CATG 7 cut(s) 17, 700, 726, 866, 893, 1041, 1251
FalI AAGNNNNNCTT 2 cut(s) 241, 273
FaqI GGGAC 2 cut(s) 984, 1127
FatI CATG 7 cut(s) 13, 696, 722, 862, 889, 1037, 1247
FblI GTMKAC 1 cut(s) 82
Fnu4HI GCNGC 9 cut(s) 354, 357, 542, 640, 702, 813, 921, 1152, 1155
FokI GGATG 2 cut(s) 431, 1186
FriOI GRGCYC 1 cut(s) 889
Fsp4HI GCNGC 9 cut(s) 354, 357, 542, 640, 702, 813, 921, 1152, 1155
FspBI CTAG 2 cut(s) 633, 1032
GluI GCNGC 9 cut(s) 354, 357, 542, 640, 702, 813, 921, 1152, 1155
GsaI CCCAGC 1 cut(s) 947
HaeIII GGCC 2 cut(s) 163, 1204
HapII CCGG 2 cut(s) 1201, 1231
Hin1II CATG 7 cut(s) 17, 700, 726, 866, 893, 1041, 1251
HincII GTYRAC 2 cut(s) 469, 1198
HindII GTYRAC 2 cut(s) 469, 1198
HinfI GANTC 7 cut(s) 431, 548, 659, 693, 772, 998, 1120
HpaII CCGG 2 cut(s) 1201, 1231
HphI GGTGA 2 cut(s) 654, 767
Hpy166II GTNNAC 5 cut(s) 83, 469, 1198, 1226, 1253
Hpy188I TCNGA 5 cut(s) 143, 823, 881, 997, 1062
Hpy188III TCNNGA 6 cut(s) 104, 334, 625, 782, 1219, 1231
Hpy8I GTNNAC 5 cut(s) 83, 469, 1198, 1226, 1253
Hpy99I CGWCG 1 cut(s) 1241
HpyAV CCTTC 4 cut(s) 40, 675, 860, 1081
HpyCH4III ACNGT 4 cut(s) 26, 390, 1241, 1257
HpyCH4V TGCA 7 cut(s) 275, 353, 544, 812, 1041, 1145, 1154
HpyF10VI GCNNNNNNNGC 3 cut(s) 612, 926, 1151
HpyF3I CTNAG 5 cut(s) 171, 492, 783, 1004, 1059
Hsp92II CATG 7 cut(s) 17, 700, 726, 866, 893, 1041, 1251
Kpn2I TCCGGA 1 cut(s) 1230
KpnI GGTACC 1 cut(s) 597
Kzo9I GATC 2 cut(s) 49, 233
LmnI GCTCC 1 cut(s) 100
Lsp1109I GCAGC 8 cut(s) 365, 528, 626, 713, 824, 907, 1138, 1166
LweI GCATC 4 cut(s) 100, 626, 799, 1138
MaeI CTAG 2 cut(s) 633, 1032
MaeIII GTNAC 3 cut(s) 57, 575, 790
MalI GATC 2 cut(s) 51, 235
MboI GATC 2 cut(s) 49, 233
MboII GAAGA 5 cut(s) 234, 900, 1020, 1063, 1096
MfeI CAATTG 1 cut(s) 435
MhlI GDGCHC 2 cut(s) 444, 889
MluCI AATT 9 cut(s) 37, 323, 435, 474, 710, 802, 984, 1045, 1099
MlyI GAGTC 2 cut(s) 440, 766
MmeI TCCRAC 1 cut(s) 263
MnlI CCTC 8 cut(s) 75, 370, 420, 501, 778, 789, 875, 910
MroI TCCGGA 1 cut(s) 1230
MseI TTAA 4 cut(s) 21, 134, 801, 1185
MspI CCGG 2 cut(s) 1201, 1231
MspR9I CCNGG 2 cut(s) 817, 1111
MunI CAATTG 1 cut(s) 435
MvaI CCWGG 2 cut(s) 817, 1111
MwoI GCNNNNNNNGC 3 cut(s) 612, 926, 1151
NdeII GATC 2 cut(s) 49, 233
NlaIII CATG 7 cut(s) 17, 700, 726, 866, 893, 1041, 1251
NlaIV GGNNCC 1 cut(s) 595
NmuCI GTSAC 2 cut(s) 575, 790
NspI RCATGY 1 cut(s) 17
PfeI GAWTC 5 cut(s) 548, 659, 693, 998, 1120
PflMI CCANNNNNTGG 1 cut(s) 1110
PkrI GCNGC 9 cut(s) 355, 358, 543, 641, 703, 814, 922, 1153, 1156
PleI GAGTC 2 cut(s) 439, 766
PpsI GAGTC 2 cut(s) 439, 766
PshBI ATTAAT 1 cut(s) 801
Psp6I CCWGG 2 cut(s) 815, 1109
PspEI GGTNACC 1 cut(s) 57
PspFI CCCAGC 1 cut(s) 943
PspGI CCWGG 2 cut(s) 815, 1109
PspN4I GGNNCC 1 cut(s) 595
PspPI GGNCC 1 cut(s) 162
PstI CTGCAG 1 cut(s) 1156
PstNI CAGNNNCTG 1 cut(s) 1151
RsaI GTAC 2 cut(s) 595, 1227
RsaNI GTAC 2 cut(s) 594, 1226
SaqAI TTAA 4 cut(s) 21, 134, 801, 1185
SatI GCNGC 9 cut(s) 354, 357, 542, 640, 702, 813, 921, 1152, 1155
Sau3AI GATC 2 cut(s) 49, 233
Sau96I GGNCC 1 cut(s) 162
SchI GAGTC 2 cut(s) 440, 766
ScrFI CCNGG 2 cut(s) 817, 1111
SduI GDGCHC 2 cut(s) 444, 889
SfaNI GCATC 4 cut(s) 100, 626, 799, 1138
SfcI CTRYAG 3 cut(s) 228, 912, 1152
SmlI CTYRAG 2 cut(s) 499, 1219
SmoI CTYRAG 2 cut(s) 499, 1219
Sse9I AATT 9 cut(s) 37, 323, 435, 474, 710, 802, 984, 1045, 1099
SsiI CCGC 3 cut(s) 357, 591, 856
SspMI CTAG 2 cut(s) 633, 1032
StyD4I CCNGG 2 cut(s) 815, 1109
TaaI ACNGT 4 cut(s) 26, 390, 1241, 1257
TasI AATT 9 cut(s) 37, 323, 435, 474, 710, 802, 984, 1045, 1099
TatI WGTACW 1 cut(s) 1225
TauI GCSGC 1 cut(s) 359
TfiI GAWTC 5 cut(s) 548, 659, 693, 998, 1120
Tru1I TTAA 4 cut(s) 21, 134, 801, 1185
Tru9I TTAA 4 cut(s) 21, 134, 801, 1185
TscAI CASTG 5 cut(s) 59, 126, 133, 277, 500
TseFI GTSAC 2 cut(s) 575, 790
TseI GCWGC 8 cut(s) 353, 541, 639, 701, 812, 920, 1151, 1154
Tsp45I GTSAC 2 cut(s) 575, 790
TspDTI ATGAA 6 cut(s) 18, 203, 572, 672, 703, 879
TspRI CASTG 5 cut(s) 59, 126, 133, 277, 500
Van91I CCANNNNNTGG 1 cut(s) 1110
VspI ATTAAT 1 cut(s) 801
XapI RAATTY 3 cut(s) 37, 323, 710
XceI RCATGY 1 cut(s) 17
XmiI GTMKAC 1 cut(s) 82
XspI CTAG 2 cut(s) 633, 1032
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.