ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 27 |
| AcyI | GRCGYC | 1 cut(s) | 257 |
| AdeI | CACNNNGTG | 1 cut(s) | 212 |
| AgsI | TTSAA | 1 cut(s) | 85 |
| AluBI | AGCT | 4 cut(s) | 11, 20, 150, 323 |
| AluI | AGCT | 4 cut(s) | 11, 20, 150, 323 |
| ApeKI | GCWGC | 4 cut(s) | 147, 215, 320, 323 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 271, 303 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 180 |
| AspS9I | GGNCC | 1 cut(s) | 242 |
| AvaII | GGWCC | 1 cut(s) | 242 |
| BbvI | GCAGC | 3 cut(s) | 159, 227, 310 |
| BccI | CCATC | 2 cut(s) | 246, 293 |
| BisI | GCNGC | 4 cut(s) | 148, 216, 321, 324 |
| BlsI | GCNGC | 4 cut(s) | 149, 217, 322, 325 |
| Bme18I | GGWCC | 1 cut(s) | 242 |
| BmgT120I | GGNCC | 1 cut(s) | 242 |
| BmiI | GGNNCC | 1 cut(s) | 243 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 44, 76 |
| BsaHI | GRCGYC | 1 cut(s) | 257 |
| BsaJI | CCNNGG | 1 cut(s) | 63 |
| BseDI | CCNNGG | 1 cut(s) | 63 |
| BseXI | GCAGC | 3 cut(s) | 159, 227, 310 |
| BsgI | GTGCAG | 1 cut(s) | 234 |
| BsmI | GAATGC | 1 cut(s) | 94 |
| Bsp143I | GATC | 1 cut(s) | 123 |
| BspCNI | CTCAG | 1 cut(s) | 4 |
| BspLI | GGNNCC | 1 cut(s) | 243 |
| BssECI | CCNNGG | 1 cut(s) | 63 |
| BssMI | GATC | 1 cut(s) | 123 |
| BssNI | GRCGYC | 1 cut(s) | 257 |
| BssT1I | CCWWGG | 1 cut(s) | 63 |
| Bst4CI | ACNGT | 1 cut(s) | 212 |
| BstACI | GRCGYC | 1 cut(s) | 257 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 212 |
| BstC8I | GCNNGC | 1 cut(s) | 225 |
| BstDEI | CTNAG | 1 cut(s) | 12 |
| BstKTI | GATC | 1 cut(s) | 126 |
| BstMBI | GATC | 1 cut(s) | 123 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 17, 212, 224 |
| BstV1I | GCAGC | 3 cut(s) | 159, 227, 310 |
| BtsIMutI | CAGTG | 1 cut(s) | 208 |
| Cac8I | GCNNGC | 1 cut(s) | 225 |
| Cfr13I | GGNCC | 1 cut(s) | 242 |
| CseI | GACGC | 1 cut(s) | 246 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 258, 293 |
| CviJI | RGCY | 6 cut(s) | 11, 20, 150, 218, 304, 323 |
| CviKI_1 | RGCY | 6 cut(s) | 11, 20, 150, 218, 304, 323 |
| DdeI | CTNAG | 1 cut(s) | 12 |
| DpnI | GATC | 1 cut(s) | 125 |
| DpnII | GATC | 1 cut(s) | 123 |
| DraIII | CACNNNGTG | 1 cut(s) | 212 |
| Eco130I | CCWWGG | 1 cut(s) | 63 |
| Eco47I | GGWCC | 1 cut(s) | 242 |
| Eco57I | CTGAAG | 1 cut(s) | 27 |
| EcoO109I | RGGNCCY | 1 cut(s) | 242 |
| EcoT14I | CCWWGG | 1 cut(s) | 63 |
| ErhI | CCWWGG | 1 cut(s) | 63 |
| FaiI | YATR | 1 cut(s) | 29 |
| Fnu4HI | GCNGC | 4 cut(s) | 148, 216, 321, 324 |
| Fsp4HI | GCNGC | 4 cut(s) | 148, 216, 321, 324 |
| GluI | GCNGC | 4 cut(s) | 148, 216, 321, 324 |
| HgaI | GACGC | 1 cut(s) | 246 |
| Hin1I | GRCGYC | 1 cut(s) | 257 |
| HincII | GTYRAC | 1 cut(s) | 261 |
| HindII | GTYRAC | 1 cut(s) | 261 |
| HinfI | GANTC | 4 cut(s) | 53, 59, 181, 280 |
| Hpy166II | GTNNAC | 1 cut(s) | 261 |
| Hpy188I | TCNGA | 3 cut(s) | 7, 58, 123 |
| Hpy8I | GTNNAC | 1 cut(s) | 261 |
| HpyAV | CCTTC | 1 cut(s) | 163 |
| HpyCH4III | ACNGT | 1 cut(s) | 212 |
| HpyCH4V | TGCA | 3 cut(s) | 215, 320, 326 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 17, 212, 224 |
| HpyF3I | CTNAG | 1 cut(s) | 12 |
| Hsp92I | GRCGYC | 1 cut(s) | 257 |
| Kzo9I | GATC | 1 cut(s) | 123 |
| LmnI | GCTCC | 1 cut(s) | 155 |
| LpnPI | CCDG | 1 cut(s) | 269 |
| Lsp1109I | GCAGC | 3 cut(s) | 159, 227, 310 |
| MalI | GATC | 1 cut(s) | 125 |
| MboI | GATC | 1 cut(s) | 123 |
| MboII | GAAGA | 1 cut(s) | 97 |
| MluCI | AATT | 3 cut(s) | 106, 135, 327 |
| MlyI | GAGTC | 3 cut(s) | 53, 62, 274 |
| MnlI | CCTC | 1 cut(s) | 229 |
| MroXI | GAANNNNTTC | 1 cut(s) | 180 |
| MspA1I | CMGCKG | 1 cut(s) | 323 |
| Mva1269I | GAATGC | 1 cut(s) | 94 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 17, 212, 224 |
| NdeII | GATC | 1 cut(s) | 123 |
| NlaIV | GGNNCC | 1 cut(s) | 243 |
| PctI | GAATGC | 1 cut(s) | 94 |
| PdmI | GAANNNNTTC | 1 cut(s) | 180 |
| PfeI | GAWTC | 1 cut(s) | 181 |
| PkrI | GCNGC | 4 cut(s) | 149, 217, 322, 325 |
| PleI | GAGTC | 3 cut(s) | 53, 61, 274 |
| PpsI | GAGTC | 3 cut(s) | 53, 61, 274 |
| PpuMI | RGGWCCY | 1 cut(s) | 242 |
| Psp5II | RGGWCCY | 1 cut(s) | 242 |
| PspN4I | GGNNCC | 1 cut(s) | 243 |
| PspPI | GGNCC | 1 cut(s) | 242 |
| PspPPI | RGGWCCY | 1 cut(s) | 242 |
| PvuII | CAGCTG | 1 cut(s) | 323 |
| SatI | GCNGC | 4 cut(s) | 148, 216, 321, 324 |
| Sau3AI | GATC | 1 cut(s) | 123 |
| Sau96I | GGNCC | 1 cut(s) | 242 |
| SchI | GAGTC | 3 cut(s) | 53, 62, 274 |
| SetI | ASST | 8 cut(s) | 13, 22, 119, 135, 152, 274, 310, 325 |
| SinI | GGWCC | 1 cut(s) | 242 |
| Sse9I | AATT | 3 cut(s) | 106, 135, 327 |
| StyI | CCWWGG | 1 cut(s) | 63 |
| TaaI | ACNGT | 1 cut(s) | 212 |
| TasI | AATT | 3 cut(s) | 106, 135, 327 |
| TfiI | GAWTC | 1 cut(s) | 181 |
| TscAI | CASTG | 1 cut(s) | 215 |
| TseI | GCWGC | 4 cut(s) | 147, 215, 320, 323 |
| TspRI | CASTG | 1 cut(s) | 215 |
| VpaK11BI | GGWCC | 1 cut(s) | 242 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 105, 235 |
| XmnI | GAANNNNTTC | 1 cut(s) | 180 |