ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 30, 88 |
| AclWI | GGATC | 4 cut(s) | 74, 99, 185, 198 |
| AcoI | YGGCCR | 1 cut(s) | 120 |
| AcuI | CTGAAG | 1 cut(s) | 75 |
| AcyI | GRCGYC | 1 cut(s) | 37 |
| AfaI | GTAC | 1 cut(s) | 278 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 269 |
| AluBI | AGCT | 3 cut(s) | 14, 113, 140 |
| AluI | AGCT | 3 cut(s) | 14, 113, 140 |
| AlwI | GGATC | 4 cut(s) | 74, 99, 185, 198 |
| AoxI | GGCC | 2 cut(s) | 120, 250 |
| ApeKI | GCWGC | 2 cut(s) | 161, 164 |
| AsuC2I | CCSGG | 1 cut(s) | 119 |
| BamHI | GGATCC | 1 cut(s) | 190 |
| BbvI | GCAGC | 2 cut(s) | 148, 151 |
| BccI | CCATC | 2 cut(s) | 195, 242 |
| BcnI | CCSGG | 1 cut(s) | 119 |
| BfaI | CTAG | 1 cut(s) | 137 |
| BfmI | CTRYAG | 1 cut(s) | 265 |
| BisI | GCNGC | 3 cut(s) | 88, 162, 165 |
| BlsI | GCNGC | 3 cut(s) | 89, 163, 166 |
| Bme1390I | CCNGG | 1 cut(s) | 119 |
| BmiI | GGNNCC | 1 cut(s) | 192 |
| BmrFI | CCNGG | 1 cut(s) | 119 |
| BpmI | CTGGAG | 1 cut(s) | 112 |
| BpuMI | CCSGG | 1 cut(s) | 119 |
| Bsa29I | ATCGAT | 1 cut(s) | 69 |
| BsaHI | GRCGYC | 1 cut(s) | 37 |
| BsaJI | CCNNGG | 1 cut(s) | 62 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 269 |
| BseCI | ATCGAT | 1 cut(s) | 69 |
| BseDI | CCNNGG | 1 cut(s) | 62 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 269 |
| BseMII | CTCAG | 1 cut(s) | 224 |
| BseXI | GCAGC | 2 cut(s) | 148, 151 |
| BshFI | GGCC | 2 cut(s) | 122, 252 |
| BshVI | ATCGAT | 1 cut(s) | 69 |
| BsiSI | CCGG | 1 cut(s) | 119 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 269 |
| BsnI | GGCC | 2 cut(s) | 122, 252 |
| Bsp143I | GATC | 3 cut(s) | 66, 104, 190 |
| BspACI | CCGC | 2 cut(s) | 30, 88 |
| BspANI | GGCC | 2 cut(s) | 122, 252 |
| BspCNI | CTCAG | 1 cut(s) | 223 |
| BspDI | ATCGAT | 1 cut(s) | 69 |
| BspLI | GGNNCC | 1 cut(s) | 192 |
| BspPI | GGATC | 4 cut(s) | 74, 99, 185, 198 |
| BssECI | CCNNGG | 1 cut(s) | 62 |
| BssMI | GATC | 3 cut(s) | 66, 104, 190 |
| BssNI | GRCGYC | 1 cut(s) | 37 |
| Bst4CI | ACNGT | 1 cut(s) | 19 |
| Bst6I | CTCTTC | 1 cut(s) | 52 |
| BstACI | GRCGYC | 1 cut(s) | 37 |
| BstDEI | CTNAG | 1 cut(s) | 210 |
| BstKTI | GATC | 3 cut(s) | 69, 107, 193 |
| BstMBI | GATC | 3 cut(s) | 66, 104, 190 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 119, 161, 258 |
| BstSCI | CCNGG | 1 cut(s) | 117 |
| BstSFI | CTRYAG | 1 cut(s) | 265 |
| BstV1I | GCAGC | 2 cut(s) | 148, 151 |
| BstX2I | RGATCY | 1 cut(s) | 190 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 90 |
| BstYI | RGATCY | 1 cut(s) | 190 |
| Bsu15I | ATCGAT | 1 cut(s) | 69 |
| BsuRI | GGCC | 2 cut(s) | 122, 252 |
| BsuTUI | ATCGAT | 1 cut(s) | 69 |
| BtgZI | GCGATG | 1 cut(s) | 214 |
| ClaI | ATCGAT | 1 cut(s) | 69 |
| CseI | GACGC | 1 cut(s) | 26 |
| Csp6I | GTAC | 1 cut(s) | 277 |
| CviAII | CATG | 3 cut(s) | 27, 84, 158 |
| CviJI | RGCY | 8 cut(s) | 14, 59, 113, 122, 140, 155, 214, 252 |
| CviKI_1 | RGCY | 8 cut(s) | 14, 59, 113, 122, 140, 155, 214, 252 |
| CviQI | GTAC | 1 cut(s) | 277 |
| DdeI | CTNAG | 1 cut(s) | 210 |
| DpnI | GATC | 3 cut(s) | 68, 106, 192 |
| DpnII | GATC | 3 cut(s) | 66, 104, 190 |
| EaeI | YGGCCR | 1 cut(s) | 120 |
| Eam1104I | CTCTTC | 1 cut(s) | 52 |
| EarI | CTCTTC | 1 cut(s) | 52 |
| Eco57I | CTGAAG | 1 cut(s) | 75 |
| FaeI | CATG | 3 cut(s) | 30, 87, 161 |
| FaiI | YATR | 8 cut(s) | 11, 22, 28, 85, 144, 159, 170, 267 |
| FatI | CATG | 3 cut(s) | 26, 83, 157 |
| Fnu4HI | GCNGC | 3 cut(s) | 88, 162, 165 |
| Fsp4HI | GCNGC | 3 cut(s) | 88, 162, 165 |
| FspBI | CTAG | 1 cut(s) | 137 |
| GluI | GCNGC | 3 cut(s) | 88, 162, 165 |
| GsuI | CTGGAG | 1 cut(s) | 112 |
| HaeIII | GGCC | 2 cut(s) | 122, 252 |
| HapII | CCGG | 1 cut(s) | 119 |
| HgaI | GACGC | 1 cut(s) | 26 |
| Hin1I | GRCGYC | 1 cut(s) | 37 |
| Hin1II | CATG | 3 cut(s) | 30, 87, 161 |
| HinfI | GANTC | 2 cut(s) | 71, 208 |
| HpaII | CCGG | 1 cut(s) | 119 |
| Hpy166II | GTNNAC | 1 cut(s) | 277 |
| Hpy188I | TCNGA | 3 cut(s) | 66, 76, 133 |
| Hpy8I | GTNNAC | 1 cut(s) | 277 |
| HpyAV | CCTTC | 1 cut(s) | 263 |
| HpyCH4III | ACNGT | 1 cut(s) | 19 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 119, 161, 258 |
| HpyF3I | CTNAG | 1 cut(s) | 210 |
| Hsp92I | GRCGYC | 1 cut(s) | 37 |
| Hsp92II | CATG | 3 cut(s) | 30, 87, 161 |
| Kzo9I | GATC | 3 cut(s) | 66, 104, 190 |
| LpnPI | CCDG | 3 cut(s) | 76, 132, 271 |
| Lsp1109I | GCAGC | 2 cut(s) | 148, 151 |
| MaeI | CTAG | 1 cut(s) | 137 |
| MalI | GATC | 3 cut(s) | 68, 106, 192 |
| MboI | GATC | 3 cut(s) | 66, 104, 190 |
| MboII | GAAGA | 2 cut(s) | 39, 108 |
| MflI | RGATCY | 1 cut(s) | 190 |
| MlyI | GAGTC | 1 cut(s) | 202 |
| MnlI | CCTC | 4 cut(s) | 72, 204, 236, 263 |
| MspA1I | CMGCKG | 1 cut(s) | 90 |
| MspI | CCGG | 1 cut(s) | 119 |
| MspR9I | CCNGG | 1 cut(s) | 119 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 119, 161, 258 |
| NciI | CCSGG | 1 cut(s) | 119 |
| NdeII | GATC | 3 cut(s) | 66, 104, 190 |
| NlaIII | CATG | 3 cut(s) | 30, 87, 161 |
| NlaIV | GGNNCC | 1 cut(s) | 192 |
| PfeI | GAWTC | 1 cut(s) | 71 |
| PkrI | GCNGC | 3 cut(s) | 89, 163, 166 |
| PleI | GAGTC | 1 cut(s) | 202 |
| PpsI | GAGTC | 1 cut(s) | 202 |
| PspN4I | GGNNCC | 1 cut(s) | 192 |
| PsuI | RGATCY | 1 cut(s) | 190 |
| RsaI | GTAC | 1 cut(s) | 278 |
| RsaNI | GTAC | 1 cut(s) | 277 |
| SatI | GCNGC | 3 cut(s) | 88, 162, 165 |
| Sau3AI | GATC | 3 cut(s) | 66, 104, 190 |
| SchI | GAGTC | 1 cut(s) | 202 |
| ScrFI | CCNGG | 1 cut(s) | 119 |
| SetI | ASST | 8 cut(s) | 16, 115, 128, 138, 142, 184, 223, 228 |
| SfcI | CTRYAG | 1 cut(s) | 265 |
| SsiI | CCGC | 2 cut(s) | 30, 88 |
| SspMI | CTAG | 1 cut(s) | 137 |
| StyD4I | CCNGG | 1 cut(s) | 117 |
| TaaI | ACNGT | 1 cut(s) | 19 |
| TaqI | TCGA | 2 cut(s) | 50, 69 |
| TatI | WGTACW | 1 cut(s) | 276 |
| TauI | GCSGC | 1 cut(s) | 90 |
| TfiI | GAWTC | 1 cut(s) | 71 |
| TseI | GCWGC | 2 cut(s) | 161, 164 |
| TspDTI | ATGAA | 2 cut(s) | 15, 159 |
| XspI | CTAG | 1 cut(s) | 137 |