Rmu_sc0009880.1_g000015

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009880.1
OG0000093
Physical Location & Seq
Forward (+)
62117 .. 64136
2020 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009880.1_g000015.1.cds

Sequence Viewer

Length: 1119 bp
atgtctgcgtctccatcgcgaacccgaaatcgaacacaaaaacatagcatcctaatcggattgatcgacaagtcagggttgatgtcggacctgttttactcggcggttgatccgcctaattcgccattatcttcaactggagagcccgacgccgagagtgagatggggaaggggttggctgtggaggccatggacttgggtacaggtagagaaaaggaggtgagtttgcctctgagtgttgacaaccgagaccaaattcttcacttaatccgacctgagttgatcgattctattttggctattcctattggagcaagggaaggatcaaatagcctaatatggccttggaataagaatggttcctactttgttaaatcagggtaccatcgggttcattcacaagagaccaatctgtctacctctaacacaagctcttctcacttagtggacactatttgctggaaactactctggaagctcgccaccctgccaaagattaagcttttcttgtggagggctttgaatggagctgtcccttctctccagaacttatattggagaaggctcactaattctccaacctgccctatttgtggagaatttgcggaaactatggagcacatcctccttgggttgaaacaatatggcctcagtctagcagctgagtatctagccgccacagctccaactccggcaacctcggtaaattacaaaacacattgggaatctcatactcaagatttggttaccatcaattgtgatgcggtgtgggtgtgtccttcttctattggtttaggagttatgatttgcgaccatagcagttcggtgatcggcggtggagcaatgcgatcttgtcagagctcagttgaagctgcagaggctcaagccattcttttcggagtaaatttggcaattgagcagaatctgcagaatgtaatagtggaatcagatttgttagaggattggattccccgacaagcgaacagggcggctcacgaggcggcctcgcttagatatcggtcggtgggtcttcttagatgggccaacaggccaccaccctccttgactcaggtgctccagaacaacggtcttccatgtccgccggcttctacatgttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

372

Amino Acids

40.62

Weight (kDa)

6.21

Isoelectric Point (pI)

46.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000093)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G09490
fragaria_vesca FvH4_1g23791 FvH4_2g01641 FvH4_2g04612 FvH4_2g06831 FvH4_2g07841 FvH4_2g13581 FvH4_2g27220 FvH4_2g30621 FvH4_2g34753 FvH4_3g10392 FvH4_3g24291 FvH4_3g25030 FvH4_3g29361 FvH4_3g31372 FvH4_3g32402 FvH4_3g43651 FvH4_4g03830 FvH4_4g05481 FvH4_4g20431 FvH4_4g21421 FvH4_4g25931 FvH4_5g08801 FvH4_5g21021 FvH4_5g26254 FvH4_5g30931 FvH4_5g31281 FvH4_5g33581 FvH4_5g35622 FvH4_6g02100 FvH4_6g07963 FvH4_6g11620 FvH4_6g16031 FvH4_6g19041 FvH4_6g24211 FvH4_6g24271 FvH4_6g30670 FvH4_6g49540 FvH4_7g25914
malus_domestica MD03G1245200.v1.1 MD04G1168000.v1.1 MD09G1242600.v1.1 MD15G1334000.v1.1 MD17G1165700.v1.1
prunus_persica Prupe.1G073500_v2.0.a1 Prupe.1G283700_v2.0.a1 Prupe.1G524100_v2.0.a1 Prupe.2G022700_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G044300_v2.0.a1 Prupe.2G048800_v2.0.a1 Prupe.2G092000_v2.0.a1 Prupe.2G216500_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.3G103400_v2.0.a1 Prupe.3G143300_v2.0.a1 Prupe.3G190000_v2.0.a1 Prupe.3G219800_v2.0.a1 Prupe.4G177800_v2.0.a1 Prupe.4G261300_v2.0.a1 Prupe.5G044600_v2.0.a1 Prupe.5G067400_v2.0.a1 Prupe.7G083900_v2.0.a1 Prupe.7G120900_v2.0.a1 Prupe.8G032200_v2.0.a1 Prupe.8G036100_v2.0.a1 Prupe.8G042700_v2.0.a1
pyrus_communis pycom01g21710 pycom02g19770 pycom03g05120 pycom05g01370 pycom05g08780 pycom05g10120 pycom07g01370 pycom07g05930 pycom08g15760 pycom08g18090 pycom08g21060 pycom09g03880 pycom10g03870 pycom13g22240 pycom16g05120 pycom16g17170 pycom17g12180 pycom17g16290 pycom17g21230 pycom17g24990 pycom215g00100
rosa_chinensis RchiOBHm_Chr1g0323031 RchiOBHm_Chr1g0324391 RchiOBHm_Chr1g0326401 RchiOBHm_Chr1g0327811 RchiOBHm_Chr1g0332521 RchiOBHm_Chr1g0336501 RchiOBHm_Chr1g0346021 RchiOBHm_Chr1g0347191 RchiOBHm_Chr1g0367181 RchiOBHm_Chr2g0089441 RchiOBHm_Chr2g0115441 RchiOBHm_Chr3g0490691 RchiOBHm_Chr4g0395251 RchiOBHm_Chr4g0398081 RchiOBHm_Chr4g0409451 RchiOBHm_Chr4g0413041 RchiOBHm_Chr4g0415471 RchiOBHm_Chr4g0420961 RchiOBHm_Chr5g0040301 RchiOBHm_Chr5g0070651 RchiOBHm_Chr6g0263011 RchiOBHm_Chr6g0270721 RchiOBHm_Chr6g0277111 RchiOBHm_Chr7g0179771 RchiOBHm_Chr7g0223051 RchiOBHm_Chr7g0225031 RchiOBHm_Chr7g0225091
rosa_laevigata RLG00000001668 RLG00000001672 RLG00000001676 RLG00000007762 RLG00000008994 RLG00000011117 RLG00000013729 RLG00000013839 RLG00000014759 RLG00000016638 RLG00000018535 RLG00000018614 RLG00000018646 RLG00000020679 RLG00000023337 RLG00000029348 RLG00000035891 RLG00000035912
rosa_multiflora Rmu_co8152500.1_g000001 Rmu_co8203314.1_g000001 Rmu_co8383183.1_g000001 Rmu_sc0000293.1_g000033 Rmu_sc0000367.1_g000226 Rmu_sc0000512.1_g000023 Rmu_sc0000594.1_g000059 Rmu_sc0000654.1_g000022 Rmu_sc0000654.1_g000047 Rmu_sc0000706.1_g000037 Rmu_sc0001348.1_g000008 Rmu_sc0001385.1_g000024 Rmu_sc0001405.1_g000002 Rmu_sc0001521.1_g000048 Rmu_sc0001932.1_g000008 Rmu_sc0001932.1_g000009 Rmu_sc0002535.1_g000011 Rmu_sc0002908.1_g000019 Rmu_sc0003709.1_g000004 Rmu_sc0003882.1_g000054 Rmu_sc0004035.1_g000007 Rmu_sc0004041.1_g000007 Rmu_sc0004288.1_g000011 Rmu_sc0004569.1_g000004 Rmu_sc0004677.1_g000016 Rmu_sc0004834.1_g000010 Rmu_sc0005193.1_g000008 Rmu_sc0005354.1_g000009 Rmu_sc0006514.1_g000021 Rmu_sc0006691.1_g000001 Rmu_sc0006888.1_g000021 Rmu_sc0006889.1_g000013 Rmu_sc0008096.1_g000017 Rmu_sc0008378.1_g000003 Rmu_sc0009127.1_g000005 Rmu_sc0009191.1_g000016 Rmu_sc0009687.1_g000018 Rmu_sc0009709.1_g000005 Rmu_sc0009880.1_g000015 Rmu_sc0011710.1_g000001 Rmu_sc0012615.1_g000004 Rmu_sc0016091.1_g000002 Rmu_sc0022339.1_g000006 Rmu_sc0026537.1_g000002 Rmu_sc0027689.1_g000002 Rmu_sc0036222.1_g000001 Rmu_sc0040890.1_g000001 Rmu_ssc0000148.1_g000006 Rmu_ssc0000151.1_g000017 Rmu_ssc0000404.1_g000018 Rmu_ssc0000449.1_g000009
rosa_roxburghii Rroxscaffold_1G00017760 Rroxscaffold_1G00059150 Rroxscaffold_2G00142560 Rroxscaffold_3G00220440 Rroxscaffold_3G00231700 Rroxscaffold_3G00232400 Rroxscaffold_3G00274510 Rroxscaffold_4G00288790 Rroxscaffold_4G00305680 Rroxscaffold_4G00314880 Rroxscaffold_4G00314900 Rroxscaffold_5G00334590 Rroxscaffold_6G00394110 Rroxscaffold_6G00415860 Rroxscaffold_7G00168240 Rroxscaffold_7G00204400 Rroxscaffold_7G00207840
rosa_rugosa Rorug01G0034900 Rorug02G0079500 Rorug02G0229000 Rorug02G0229100 Rorug02G0291400 Rorug02G0298800 Rorug03G0046400 Rorug03G0064700 Rorug03G0077300 Rorug03G0199000 Rorug03G0200400 Rorug04G0205200 Rorug05G0025400 Rorug05G0127400 Rorug05G0192100 Rorug05G0453400 Rorug05G0538300 Rorug06G0035200 Rorug06G0241000 Rorug06G0268300 Rorug07G0120300 Rorug07G0145000 Rorug07G0209100 Rorug07G0240500 Rorug07G0271700
rosa_samantha Rh1AG179100 Rh1BG106900 Rh1BG163400 Rh1BG163500 Rh1BG323500 Rh2CG447900 Rh2DG503700 Rh3AG293600 Rh3CG229100 Rh3DG221500 Rh4AG106000 Rh4BG267700 Rh4CG062500 Rh4CG090100 Rh4CG114800 Rh5AG038400 Rh5BG395400 Rh5CG441700 Rh5CG572000 Rh6AG222400 Rh6AG264500 Rh6BG137400 Rh6BG225700 Rh6CG144300 Rh6DG087600 Rh6DG096000 Rh6DG362400 Rh6DG390200 Rh7AG207500 Rh7AG324700 Rh7AG388800 Rh7AG437100 Rh7BG019000 Rh7BG374600 Rh7CG028700 Rh7CG341500 Rh7CG408000 Rh7CG408300 Rh7DG354600
rosa_wichuraiana Rw0G009630 Rw0G012170 Rw4G022700 Rw5G028420 Rw5G029490 Rw6G007220 Rw6G007410 Rw6G017880 Rw7G012440 Rw7G021830 Rw7G027490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 412
Acc36I ACCTGC 1 cut(s) 590
Acc65I GGTACC 1 cut(s) 381
AccB1I GGYRCC 1 cut(s) 381
AccI GTMKAC 1 cut(s) 416
AccII CGCG 1 cut(s) 19
AciI CCGC 9 cut(s) 104, 113, 605, 675, 764, 834, 989, 1001, 1100
AclWI GGATC 2 cut(s) 104, 331
AcsI RAATTY 3 cut(s) 255, 599, 904
AcyI GRCGYC 1 cut(s) 150
AdeI CACNNNGTG 1 cut(s) 445
AfaI GTAC 2 cut(s) 202, 383
AfiI CCNNNNNNNGG 1 cut(s) 593
AflIII ACRYGT 1 cut(s) 1112
AgsI TTSAA 4 cut(s) 135, 523, 637, 869
AluBI AGCT 8 cut(s) 432, 478, 502, 530, 662, 683, 861, 872
AluI AGCT 8 cut(s) 432, 478, 502, 530, 662, 683, 861, 872
Alw21I GWGCWC 3 cut(s) 621, 863, 1077
Alw26I GTCTC 3 cut(s) 15, 243, 398
AlwI GGATC 2 cut(s) 104, 331
AlwNI CAGNNNCTG 1 cut(s) 925
AoxI GGCC 6 cut(s) 186, 341, 646, 1002, 1041, 1049
ApeKI GCWGC 2 cut(s) 659, 872
ApoI RAATTY 3 cut(s) 255, 599, 904
Asp718I GGTACC 1 cut(s) 381
AspS9I GGNCC 2 cut(s) 88, 1041
AsuHPI GGTGA 2 cut(s) 232, 838
AvaII GGWCC 1 cut(s) 88
BanI GGYRCC 1 cut(s) 381
BanII GRGCYC 2 cut(s) 147, 863
BauI CACGAG 1 cut(s) 995
BbsI GAAGAC 2 cut(s) 1022, 1082
Bbv12I GWGCWC 3 cut(s) 621, 863, 1077
BbvI GCAGC 2 cut(s) 671, 859
BccI CCATC 5 cut(s) 22, 157, 393, 758, 1032
BcgI CGANNNNNNTGC 2 cut(s) 37, 71
BcoDI GTCTC 3 cut(s) 15, 243, 398
BfaI CTAG 2 cut(s) 656, 671
BfmI CTRYAG 2 cut(s) 873, 926
BfuAI ACCTGC 1 cut(s) 590
BisI GCNGC 5 cut(s) 660, 675, 873, 990, 1002
BlsI GCNGC 5 cut(s) 661, 676, 874, 991, 1003
Bme18I GGWCC 1 cut(s) 88
BmgT120I GGNCC 2 cut(s) 88, 1041
BmiI GGNNCC 2 cut(s) 361, 383
BmsI GCATC 2 cut(s) 57, 751
BpiI GAAGAC 2 cut(s) 1022, 1082
BplI GAGNNNNNCTC 4 cut(s) 214, 246, 989, 1021
BpmI CTGGAG 3 cut(s) 159, 527, 1061
BpuEI CTTGAG 2 cut(s) 720, 867
Bsa29I ATCGAT 1 cut(s) 285
BsaHI GRCGYC 1 cut(s) 150
BsaI GGTCTC 2 cut(s) 243, 398
BsaJI CCNNGG 4 cut(s) 189, 344, 628, 699
BsaXI ACNNNNNCTCC 2 cut(s) 559, 589
Bsc4I CCNNNNNNNGG 1 cut(s) 593
Bse118I RCCGGY 1 cut(s) 1102
Bse1I ACTGG 1 cut(s) 142
Bse3DI GCAATG 1 cut(s) 849
BseCI ATCGAT 1 cut(s) 285
BseDI CCNNGG 4 cut(s) 189, 344, 628, 699
BseGI GGATG 2 cut(s) 48, 621
BseLI CCNNNNNNNGG 1 cut(s) 593
BseMI GCAATG 1 cut(s) 849
BseMII CTCAG 6 cut(s) 224, 267, 654, 664, 876, 1082
BseNI ACTGG 1 cut(s) 142
BseXI GCAGC 2 cut(s) 671, 859
Bsh1236I CGCG 1 cut(s) 19
Bsh1285I CGRYCG 1 cut(s) 1022
BshFI GGCC 6 cut(s) 188, 343, 648, 1004, 1043, 1051
BshNI GGYRCC 1 cut(s) 381
BshVI ATCGAT 1 cut(s) 285
BsiEI CGRYCG 1 cut(s) 1022
BsiHKAI GWGCWC 3 cut(s) 621, 863, 1077
BsiSI CCGG 2 cut(s) 692, 1103
BslFI GGGAC 1 cut(s) 518
BslI CCNNNNNNNGG 1 cut(s) 593
BsmAI GTCTC 3 cut(s) 15, 243, 398
BsmBI CGTCTC 1 cut(s) 15
BsmFI GGGAC 1 cut(s) 518
BsnI GGCC 6 cut(s) 188, 343, 648, 1004, 1043, 1051
Bso31I GGTCTC 2 cut(s) 243, 398
Bsp1286I GDGCHC 4 cut(s) 147, 621, 863, 1077
Bsp143I GATC 6 cut(s) 63, 109, 282, 323, 828, 848
Bsp19I CCATGG 1 cut(s) 189
Bsp68I TCGCGA 1 cut(s) 19
BspACI CCGC 9 cut(s) 104, 113, 605, 675, 764, 834, 989, 1001, 1100
BspANI GGCC 6 cut(s) 188, 343, 648, 1004, 1043, 1051
BspCNI CTCAG 6 cut(s) 225, 268, 655, 663, 875, 1081
BspDI ATCGAT 1 cut(s) 285
BspFNI CGCG 1 cut(s) 19
BspLI GGNNCC 2 cut(s) 361, 383
BspMAI CTGCAG 2 cut(s) 877, 930
BspMI ACCTGC 1 cut(s) 590
BspPI GGATC 2 cut(s) 104, 331
BspQI GCTCTTC 1 cut(s) 439
BspT107I GGYRCC 1 cut(s) 381
BspTNI GGTCTC 2 cut(s) 243, 398
BsrDI GCAATG 1 cut(s) 849
BsrFI RCCGGY 1 cut(s) 1102
BsrI ACTGG 1 cut(s) 142
BssAI RCCGGY 1 cut(s) 1102
BssECI CCNNGG 4 cut(s) 189, 344, 628, 699
BssMI GATC 6 cut(s) 63, 109, 282, 323, 828, 848
BssNI GRCGYC 1 cut(s) 150
BssSI CACGAG 1 cut(s) 995
BssT1I CCWWGG 3 cut(s) 189, 344, 628
Bst2BI CACGAG 1 cut(s) 995
Bst4CI ACNGT 1 cut(s) 1088
Bst6I CTCTTC 1 cut(s) 439
BstACI GRCGYC 1 cut(s) 150
BstAPI GCANNNNNTGC 1 cut(s) 925
BstC8I GCNNGC 2 cut(s) 480, 1104
BstDEI CTNAG 9 cut(s) 233, 276, 442, 650, 663, 862, 1010, 1034, 1068
BstDSI CCRYGG 1 cut(s) 189
BstEII GGTNACC 1 cut(s) 745
BstF5I GGATG 2 cut(s) 48, 621
BstFNI CGCG 1 cut(s) 19
BstKTI GATC 6 cut(s) 66, 112, 285, 326, 831, 851
BstMAI GTCTC 3 cut(s) 15, 243, 398
BstMBI GATC 6 cut(s) 63, 109, 282, 323, 828, 848
BstMCI CGRYCG 1 cut(s) 1022
BstMWI GCNNNNNNNGC 8 cut(s) 121, 185, 680, 816, 878, 925, 986, 998
BstNSI RCATGY 1 cut(s) 1116
BstPI GGTNACC 1 cut(s) 745
BstSFI CTRYAG 2 cut(s) 873, 926
BstUI CGCG 1 cut(s) 19
BstV1I GCAGC 2 cut(s) 671, 859
BstV2I GAAGAC 2 cut(s) 1022, 1082
BstXI CCANNNNNNTGG 1 cut(s) 196
Bsu15I ATCGAT 1 cut(s) 285
BsuRI GGCC 6 cut(s) 188, 343, 648, 1004, 1043, 1051
BsuTUI ATCGAT 1 cut(s) 285
BtgI CCRYGG 1 cut(s) 189
BtsCI GGATG 2 cut(s) 48, 621
BtuMI TCGCGA 1 cut(s) 19
BveI ACCTGC 1 cut(s) 590
Cac8I GCNNGC 2 cut(s) 480, 1104
CaiI CAGNNNCTG 1 cut(s) 925
Cfr10I RCCGGY 1 cut(s) 1102
Cfr13I GGNCC 2 cut(s) 88, 1041
ClaI ATCGAT 1 cut(s) 285
CseI GACGC 1 cut(s) 158
Csp6I GTAC 2 cut(s) 201, 382
CspCI CAANNNNNGTGG 2 cut(s) 1044, 1079
CviAII CATG 3 cut(s) 190, 1095, 1113
CviQI GTAC 2 cut(s) 201, 382
DdeI CTNAG 9 cut(s) 233, 276, 442, 650, 663, 862, 1010, 1034, 1068
DpnI GATC 6 cut(s) 65, 111, 284, 325, 830, 850
DpnII GATC 6 cut(s) 63, 109, 282, 323, 828, 848
DraIII CACNNNGTG 1 cut(s) 445
DrdI GACNNNNNNGTC 1 cut(s) 412
DseDI GACNNNNNNGTC 1 cut(s) 412
Eam1104I CTCTTC 1 cut(s) 439
EarI CTCTTC 1 cut(s) 439
EciI GGCGGA 2 cut(s) 102, 1089
Ecl136II GAGCTC 1 cut(s) 861
Eco130I CCWWGG 3 cut(s) 189, 344, 628
Eco24I GRGCYC 2 cut(s) 147, 863
Eco31I GGTCTC 2 cut(s) 243, 398
Eco32I GATATC 1 cut(s) 1016
Eco47I GGWCC 1 cut(s) 88
Eco53kI GAGCTC 1 cut(s) 861
Eco91I GGTNACC 1 cut(s) 745
EcoICRI GAGCTC 1 cut(s) 861
EcoO65I GGTNACC 1 cut(s) 745
EcoRV GATATC 1 cut(s) 1016
EcoT14I CCWWGG 3 cut(s) 189, 344, 628
EcoT38I GRGCYC 2 cut(s) 147, 863
ErhI CCWWGG 3 cut(s) 189, 344, 628
Esp3I CGTCTC 1 cut(s) 15
FaeI CATG 3 cut(s) 193, 1098, 1116
FalI AAGNNNNNCTT 4 cut(s) 491, 523, 876, 908
FaqI GGGAC 1 cut(s) 518
FatI CATG 3 cut(s) 189, 1094, 1112
FblI GTMKAC 1 cut(s) 416
Fnu4HI GCNGC 5 cut(s) 660, 675, 873, 990, 1002
FokI GGATG 2 cut(s) 35, 608
FriOI GRGCYC 2 cut(s) 147, 863
Fsp4HI GCNGC 5 cut(s) 660, 675, 873, 990, 1002
FspBI CTAG 2 cut(s) 656, 671
GluI GCNGC 5 cut(s) 660, 675, 873, 990, 1002
GsuI CTGGAG 3 cut(s) 159, 527, 1061
HaeIII GGCC 6 cut(s) 188, 343, 648, 1004, 1043, 1051
HapII CCGG 2 cut(s) 692, 1103
HgaI GACGC 1 cut(s) 158
Hin1I GRCGYC 1 cut(s) 150
Hin1II CATG 3 cut(s) 193, 1098, 1116
HincII GTYRAC 1 cut(s) 241
HindII GTYRAC 1 cut(s) 241
HindIII AAGCTT 1 cut(s) 500
HinfI GANTC 6 cut(s) 287, 725, 922, 944, 967, 1066
HpaII CCGG 2 cut(s) 692, 1103
HphI GGTGA 2 cut(s) 232, 838
Hpy166II GTNNAC 3 cut(s) 241, 417, 448
Hpy188I TCNGA 7 cut(s) 59, 88, 234, 272, 858, 899, 949
Hpy188III TCNNGA 6 cut(s) 18, 472, 544, 737, 995, 1078
Hpy8I GTNNAC 3 cut(s) 241, 417, 448
Hpy99I CGWCG 1 cut(s) 152
HpyAV CCTTC 5 cut(s) 163, 314, 546, 555, 789
HpyCH4III ACNGT 1 cut(s) 1088
HpyCH4V TGCA 2 cut(s) 875, 928
HpyF10VI GCNNNNNNNGC 8 cut(s) 121, 185, 680, 816, 878, 925, 986, 998
HpyF3I CTNAG 9 cut(s) 233, 276, 442, 650, 663, 862, 1010, 1034, 1068
Hsp92I GRCGYC 1 cut(s) 150
Hsp92II CATG 3 cut(s) 193, 1098, 1116
KpnI GGTACC 1 cut(s) 385
KroI GCCGGC 1 cut(s) 1102
KroNI GCCGGC 1 cut(s) 1104
Kzo9I GATC 6 cut(s) 63, 109, 282, 323, 828, 848
LguI GCTCTTC 1 cut(s) 439
LmnI GCTCC 6 cut(s) 311, 527, 616, 688, 839, 1080
Lsp1109I GCAGC 2 cut(s) 671, 859
LweI GCATC 2 cut(s) 57, 751
MaeI CTAG 2 cut(s) 656, 671
MaeIII GTNAC 1 cut(s) 745
MalI GATC 6 cut(s) 65, 111, 284, 325, 830, 850
MboI GATC 6 cut(s) 63, 109, 282, 323, 828, 848
MboII GAAGA 6 cut(s) 123, 251, 426, 774, 1022, 1082
MfeI CAATTG 2 cut(s) 754, 912
MhlI GDGCHC 4 cut(s) 147, 621, 863, 1077
MluCI AATT 8 cut(s) 118, 255, 571, 599, 706, 754, 904, 912
MlyI GAGTC 1 cut(s) 1060
MmeI TCCRAC 4 cut(s) 66, 295, 602, 710
MroNI GCCGGC 1 cut(s) 1102
MseI TTAA 4 cut(s) 266, 372, 498, 1117
MspA1I CMGCKG 1 cut(s) 662
MspI CCGG 2 cut(s) 692, 1103
MunI CAATTG 2 cut(s) 754, 912
MvnI CGCG 1 cut(s) 19
MwoI GCNNNNNNNGC 8 cut(s) 121, 185, 680, 816, 878, 925, 986, 998
NaeI GCCGGC 1 cut(s) 1104
NcoI CCATGG 1 cut(s) 189
NdeII GATC 6 cut(s) 63, 109, 282, 323, 828, 848
NgoMIV GCCGGC 1 cut(s) 1102
NlaIII CATG 3 cut(s) 193, 1098, 1116
NlaIV GGNNCC 2 cut(s) 361, 383
NmeAIII GCCGAG 2 cut(s) 80, 178
NruI TCGCGA 1 cut(s) 19
NspI RCATGY 1 cut(s) 1116
PciI ACATGT 1 cut(s) 1112
PciSI GCTCTTC 1 cut(s) 439
PcsI WCGNNNNNNNCGW 1 cut(s) 63
PdiI GCCGGC 1 cut(s) 1104
PfeI GAWTC 5 cut(s) 287, 725, 922, 944, 967
PkrI GCNGC 5 cut(s) 661, 676, 874, 991, 1003
PleI GAGTC 1 cut(s) 1060
PpsI GAGTC 1 cut(s) 1060
PscI ACATGT 1 cut(s) 1112
Psp124BI GAGCTC 1 cut(s) 863
PspEI GGTNACC 1 cut(s) 745
PspN4I GGNNCC 2 cut(s) 361, 383
PspPI GGNCC 2 cut(s) 88, 1041
PstI CTGCAG 2 cut(s) 877, 930
PstNI CAGNNNCTG 1 cut(s) 925
PvuII CAGCTG 1 cut(s) 662
RruI TCGCGA 1 cut(s) 19
RsaI GTAC 2 cut(s) 202, 383
RsaNI GTAC 2 cut(s) 201, 382
SacI GAGCTC 1 cut(s) 863
SapI GCTCTTC 1 cut(s) 439
SaqAI TTAA 4 cut(s) 266, 372, 498, 1117
SatI GCNGC 5 cut(s) 660, 675, 873, 990, 1002
Sau3AI GATC 6 cut(s) 63, 109, 282, 323, 828, 848
Sau96I GGNCC 2 cut(s) 88, 1041
SchI GAGTC 1 cut(s) 1060
SduI GDGCHC 4 cut(s) 147, 621, 863, 1077
SfaNI GCATC 2 cut(s) 57, 751
SfcI CTRYAG 2 cut(s) 873, 926
SinI GGWCC 1 cut(s) 88
SmlI CTYRAG 2 cut(s) 735, 882
SmoI CTYRAG 2 cut(s) 735, 882
Sse9I AATT 8 cut(s) 118, 255, 571, 599, 706, 754, 904, 912
SsiI CCGC 9 cut(s) 104, 113, 605, 675, 764, 834, 989, 1001, 1100
SspMI CTAG 2 cut(s) 656, 671
SstI GAGCTC 1 cut(s) 863
StyI CCWWGG 3 cut(s) 189, 344, 628
TaaI ACNGT 1 cut(s) 1088
TaqI TCGA 3 cut(s) 31, 66, 285
TaqII GACCGA 1 cut(s) 1008
TasI AATT 8 cut(s) 118, 255, 571, 599, 706, 754, 904, 912
TauI GCSGC 3 cut(s) 677, 992, 1004
TfiI GAWTC 5 cut(s) 287, 725, 922, 944, 967
Tru1I TTAA 4 cut(s) 266, 372, 498, 1117
Tru9I TTAA 4 cut(s) 266, 372, 498, 1117
TseI GCWGC 2 cut(s) 659, 872
TspDTI ATGAA 1 cut(s) 383
VpaK11BI GGWCC 1 cut(s) 88
XapI RAATTY 3 cut(s) 255, 599, 904
XceI RCATGY 1 cut(s) 1116
XmiI GTMKAC 1 cut(s) 416
XspI CTAG 2 cut(s) 656, 671
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.