ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ADH_zinc_N_2 | PF13602 | 53 - 105 | 4.1e-07 | Zinc-binding dehydrogenase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 54 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 95 |
| AhlI | ACTAGT | 1 cut(s) | 104 |
| AjnI | CCWGG | 1 cut(s) | 94 |
| AluBI | AGCT | 3 cut(s) | 48, 137, 160 |
| AluI | AGCT | 3 cut(s) | 48, 137, 160 |
| ApeKI | GCWGC | 2 cut(s) | 119, 137 |
| AspLEI | GCGC | 1 cut(s) | 55 |
| AsuHPI | GGTGA | 2 cut(s) | 224, 308 |
| AsuII | TTCGAA | 1 cut(s) | 252 |
| BbvI | GCAGC | 2 cut(s) | 106, 124 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 280, 314 |
| BciT130I | CCWGG | 1 cut(s) | 96 |
| BcuI | ACTAGT | 1 cut(s) | 104 |
| BfaI | CTAG | 1 cut(s) | 105 |
| BisI | GCNGC | 2 cut(s) | 120, 138 |
| BlsI | GCNGC | 2 cut(s) | 121, 139 |
| Bme1390I | CCNGG | 1 cut(s) | 96 |
| BmrFI | CCNGG | 1 cut(s) | 96 |
| BmsI | GCATC | 2 cut(s) | 183, 269 |
| Bpu14I | TTCGAA | 1 cut(s) | 252 |
| BpuEI | CTTGAG | 2 cut(s) | 117, 263 |
| BsaJI | CCNNGG | 1 cut(s) | 264 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 95 |
| Bse1I | ACTGG | 1 cut(s) | 71 |
| BseBI | CCWGG | 1 cut(s) | 96 |
| BseDI | CCNNGG | 1 cut(s) | 264 |
| BseGI | GGATG | 1 cut(s) | 260 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 95 |
| BseNI | ACTGG | 1 cut(s) | 71 |
| BseXI | GCAGC | 2 cut(s) | 106, 124 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 95 |
| Bsp119I | TTCGAA | 1 cut(s) | 252 |
| BspT104I | TTCGAA | 1 cut(s) | 252 |
| BsrI | ACTGG | 1 cut(s) | 71 |
| BssECI | CCNNGG | 1 cut(s) | 264 |
| Bst2UI | CCWGG | 1 cut(s) | 96 |
| Bst4CI | ACNGT | 1 cut(s) | 148 |
| BstBI | TTCGAA | 1 cut(s) | 252 |
| BstC8I | GCNNGC | 2 cut(s) | 142, 198 |
| BstDEI | CTNAG | 1 cut(s) | 183 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 93 |
| BstF5I | GGATG | 1 cut(s) | 260 |
| BstHHI | GCGC | 1 cut(s) | 55 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 266 |
| BstNI | CCWGG | 1 cut(s) | 96 |
| BstSCI | CCNGG | 1 cut(s) | 94 |
| BstV1I | GCAGC | 2 cut(s) | 106, 124 |
| BtsCI | GGATG | 1 cut(s) | 260 |
| Cac8I | GCNNGC | 2 cut(s) | 142, 198 |
| CfoI | GCGC | 1 cut(s) | 55 |
| CseI | GACGC | 1 cut(s) | 125 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 268, 303 |
| CviAII | CATG | 1 cut(s) | 217 |
| CviJI | RGCY | 4 cut(s) | 48, 137, 160, 178 |
| CviKI_1 | RGCY | 4 cut(s) | 48, 137, 160, 178 |
| DdeI | CTNAG | 1 cut(s) | 183 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 93 |
| EcoRII | CCWGG | 1 cut(s) | 94 |
| FaeI | CATG | 1 cut(s) | 220 |
| FaiI | YATR | 6 cut(s) | 51, 151, 167, 218, 248, 297 |
| FatI | CATG | 1 cut(s) | 216 |
| Fnu4HI | GCNGC | 2 cut(s) | 120, 138 |
| FokI | GGATG | 1 cut(s) | 247 |
| Fsp4HI | GCNGC | 2 cut(s) | 120, 138 |
| FspBI | CTAG | 1 cut(s) | 105 |
| FspI | TGCGCA | 1 cut(s) | 54 |
| GlaI | GCGC | 1 cut(s) | 54 |
| GluI | GCNGC | 2 cut(s) | 120, 138 |
| HgaI | GACGC | 1 cut(s) | 125 |
| HhaI | GCGC | 1 cut(s) | 55 |
| Hin1II | CATG | 1 cut(s) | 220 |
| Hin6I | GCGC | 1 cut(s) | 53 |
| HinP1I | GCGC | 1 cut(s) | 53 |
| HphI | GGTGA | 2 cut(s) | 224, 308 |
| Hpy188I | TCNGA | 4 cut(s) | 7, 157, 265, 302 |
| Hpy188III | TCNNGA | 1 cut(s) | 280 |
| HpyCH4III | ACNGT | 1 cut(s) | 148 |
| HpyCH4V | TGCA | 3 cut(s) | 77, 144, 200 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 266 |
| HpyF3I | CTNAG | 1 cut(s) | 183 |
| Hsp92II | CATG | 1 cut(s) | 220 |
| HspAI | GCGC | 1 cut(s) | 53 |
| LpnPI | CCDG | 4 cut(s) | 81, 84, 108, 210 |
| Lsp1109I | GCAGC | 2 cut(s) | 106, 124 |
| LweI | GCATC | 2 cut(s) | 183, 269 |
| MaeI | CTAG | 1 cut(s) | 105 |
| MaeIII | GTNAC | 1 cut(s) | 212 |
| MboII | GAAGA | 1 cut(s) | 266 |
| MfeI | CAATTG | 2 cut(s) | 80, 201 |
| MluCI | AATT | 2 cut(s) | 80, 201 |
| MnlI | CCTC | 4 cut(s) | 35, 141, 232, 259 |
| MspR9I | CCNGG | 1 cut(s) | 96 |
| MunI | CAATTG | 2 cut(s) | 80, 201 |
| MvaI | CCWGG | 1 cut(s) | 96 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 266 |
| NlaIII | CATG | 1 cut(s) | 220 |
| NmuCI | GTSAC | 1 cut(s) | 212 |
| NsbI | TGCGCA | 1 cut(s) | 54 |
| NspV | TTCGAA | 1 cut(s) | 252 |
| PfoI | TCCNGGA | 1 cut(s) | 94 |
| PkrI | GCNGC | 2 cut(s) | 121, 139 |
| Psp6I | CCWGG | 1 cut(s) | 94 |
| PspGI | CCWGG | 1 cut(s) | 94 |
| SatI | GCNGC | 2 cut(s) | 120, 138 |
| ScrFI | CCNGG | 1 cut(s) | 96 |
| SetI | ASST | 4 cut(s) | 50, 139, 162, 243 |
| SfaNI | GCATC | 2 cut(s) | 183, 269 |
| SfuI | TTCGAA | 1 cut(s) | 252 |
| SmlI | CTYRAG | 2 cut(s) | 132, 278 |
| SmoI | CTYRAG | 2 cut(s) | 132, 278 |
| SpeI | ACTAGT | 1 cut(s) | 104 |
| Sse9I | AATT | 2 cut(s) | 80, 201 |
| SspMI | CTAG | 1 cut(s) | 105 |
| StyD4I | CCNGG | 1 cut(s) | 94 |
| TaaI | ACNGT | 1 cut(s) | 148 |
| TaqI | TCGA | 1 cut(s) | 252 |
| TasI | AATT | 2 cut(s) | 80, 201 |
| TseFI | GTSAC | 1 cut(s) | 212 |
| TseI | GCWGC | 2 cut(s) | 119, 137 |
| Tsp45I | GTSAC | 1 cut(s) | 212 |
| TspDTI | ATGAA | 2 cut(s) | 182, 233 |
| TspGWI | ACGGA | 1 cut(s) | 54 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 93 |
| XspI | CTAG | 1 cut(s) | 105 |