Rw4G022700

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000093
Physical Location & Seq
Forward (+)
48197724 .. 48198701
978 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G022700.1

Sequence Viewer

Length: 786 bp
ATGCCAAAAATCTCGAATTTCTTGTGGAAAGCTCTCTCTAATGCTCTCCCAACAGCCTCAAACCTTTACAAGAGGAAAACTCTTCCTAGCCCTTTATGCAATATCTGTGGAGAGTTCCCGGAAACGATTGAGCACTGCCTTCTTCTTTGTCCTTGGACGACTGCTGTATGGTGTGAGATCGTATTGAATCATGGCAGCCCAAACCCTACGGGCACGATTGAAAAAATCCAACGAAACTTCGGCGAATGGAAGCTAGCCGTTGACTCACAGGACAGGCCCAGTCAGGGCAGCAATAGTGTTGACCAGGTCGCTCAATGGTACCCACCGGATCCCCATACAGTTAAGATCAATGTGGATGGTGCGTGGGTGGCAAGTAACCTGAGGAGTGGAATAGGTATCATTGTTAGAAACCACAGAGGAAAGTCTGTAGCAGGGGCTAGTGTTCATGGTACTCATAATTCTGCCATTGAAGTGGAGGCAGCAGCTGTAGTTGAGGGCTTAAAGTTCGCAGCCCATTTGAAGCTCCAGAATATTATCCTTGAAAGTGACTGTCAGGATATTATTGCAAGGATCTCTCCATTAATCAGCTTGGTATCTCATCTCAAGCCCCTTTTCTCCGGGATCAAATGGAACTGGATCCCCCGGGAAGCTAACCGCGTAGCTGACGCTGCGGCGAAGCTTGCAAAACTGAGGACGTGCTCACAACAGTGGGCCAACAGGCCTCCATCTTCTCTTCTTTCTGTTTTAAGGAATGATGGCCTCCCAGGGCCCCCTACCAACCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

261

Amino Acids

28.57

Weight (kDa)

9.01

Isoelectric Point (pI)

36.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RVT PF13966 2 - 57 4.8e-13 zinc-binding in reverse transcriptase
RVT_3 PF13456 117 - 228 3.3e-21 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000093)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G09490
fragaria_vesca FvH4_1g23791 FvH4_2g01641 FvH4_2g04612 FvH4_2g06831 FvH4_2g07841 FvH4_2g13581 FvH4_2g27220 FvH4_2g30621 FvH4_2g34753 FvH4_3g10392 FvH4_3g24291 FvH4_3g25030 FvH4_3g29361 FvH4_3g31372 FvH4_3g32402 FvH4_3g43651 FvH4_4g03830 FvH4_4g05481 FvH4_4g20431 FvH4_4g21421 FvH4_4g25931 FvH4_5g08801 FvH4_5g21021 FvH4_5g26254 FvH4_5g30931 FvH4_5g31281 FvH4_5g33581 FvH4_5g35622 FvH4_6g02100 FvH4_6g07963 FvH4_6g11620 FvH4_6g16031 FvH4_6g19041 FvH4_6g24211 FvH4_6g24271 FvH4_6g30670 FvH4_6g49540 FvH4_7g25914
malus_domestica MD03G1245200.v1.1 MD04G1168000.v1.1 MD09G1242600.v1.1 MD15G1334000.v1.1 MD17G1165700.v1.1
prunus_persica Prupe.1G073500_v2.0.a1 Prupe.1G283700_v2.0.a1 Prupe.1G524100_v2.0.a1 Prupe.2G022700_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G044300_v2.0.a1 Prupe.2G048800_v2.0.a1 Prupe.2G092000_v2.0.a1 Prupe.2G216500_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.3G103400_v2.0.a1 Prupe.3G143300_v2.0.a1 Prupe.3G190000_v2.0.a1 Prupe.3G219800_v2.0.a1 Prupe.4G177800_v2.0.a1 Prupe.4G261300_v2.0.a1 Prupe.5G044600_v2.0.a1 Prupe.5G067400_v2.0.a1 Prupe.7G083900_v2.0.a1 Prupe.7G120900_v2.0.a1 Prupe.8G032200_v2.0.a1 Prupe.8G036100_v2.0.a1 Prupe.8G042700_v2.0.a1
pyrus_communis pycom01g21710 pycom02g19770 pycom03g05120 pycom05g01370 pycom05g08780 pycom05g10120 pycom07g01370 pycom07g05930 pycom08g15760 pycom08g18090 pycom08g21060 pycom09g03880 pycom10g03870 pycom13g22240 pycom16g05120 pycom16g17170 pycom17g12180 pycom17g16290 pycom17g21230 pycom17g24990 pycom215g00100
rosa_chinensis RchiOBHm_Chr1g0323031 RchiOBHm_Chr1g0324391 RchiOBHm_Chr1g0326401 RchiOBHm_Chr1g0327811 RchiOBHm_Chr1g0332521 RchiOBHm_Chr1g0336501 RchiOBHm_Chr1g0346021 RchiOBHm_Chr1g0347191 RchiOBHm_Chr1g0367181 RchiOBHm_Chr2g0089441 RchiOBHm_Chr2g0115441 RchiOBHm_Chr3g0490691 RchiOBHm_Chr4g0395251 RchiOBHm_Chr4g0398081 RchiOBHm_Chr4g0409451 RchiOBHm_Chr4g0413041 RchiOBHm_Chr4g0415471 RchiOBHm_Chr4g0420961 RchiOBHm_Chr5g0040301 RchiOBHm_Chr5g0070651 RchiOBHm_Chr6g0263011 RchiOBHm_Chr6g0270721 RchiOBHm_Chr6g0277111 RchiOBHm_Chr7g0179771 RchiOBHm_Chr7g0223051 RchiOBHm_Chr7g0225031 RchiOBHm_Chr7g0225091
rosa_laevigata RLG00000001668 RLG00000001672 RLG00000001676 RLG00000007762 RLG00000008994 RLG00000011117 RLG00000013729 RLG00000013839 RLG00000014759 RLG00000016638 RLG00000018535 RLG00000018614 RLG00000018646 RLG00000020679 RLG00000023337 RLG00000029348 RLG00000035891 RLG00000035912
rosa_multiflora Rmu_co8152500.1_g000001 Rmu_co8203314.1_g000001 Rmu_co8383183.1_g000001 Rmu_sc0000293.1_g000033 Rmu_sc0000367.1_g000226 Rmu_sc0000512.1_g000023 Rmu_sc0000594.1_g000059 Rmu_sc0000654.1_g000022 Rmu_sc0000654.1_g000047 Rmu_sc0000706.1_g000037 Rmu_sc0001348.1_g000008 Rmu_sc0001385.1_g000024 Rmu_sc0001405.1_g000002 Rmu_sc0001521.1_g000048 Rmu_sc0001932.1_g000008 Rmu_sc0001932.1_g000009 Rmu_sc0002535.1_g000011 Rmu_sc0002908.1_g000019 Rmu_sc0003709.1_g000004 Rmu_sc0003882.1_g000054 Rmu_sc0004035.1_g000007 Rmu_sc0004041.1_g000007 Rmu_sc0004288.1_g000011 Rmu_sc0004569.1_g000004 Rmu_sc0004677.1_g000016 Rmu_sc0004834.1_g000010 Rmu_sc0005193.1_g000008 Rmu_sc0005354.1_g000009 Rmu_sc0006514.1_g000021 Rmu_sc0006691.1_g000001 Rmu_sc0006888.1_g000021 Rmu_sc0006889.1_g000013 Rmu_sc0008096.1_g000017 Rmu_sc0008378.1_g000003 Rmu_sc0009127.1_g000005 Rmu_sc0009191.1_g000016 Rmu_sc0009687.1_g000018 Rmu_sc0009709.1_g000005 Rmu_sc0009880.1_g000015 Rmu_sc0011710.1_g000001 Rmu_sc0012615.1_g000004 Rmu_sc0016091.1_g000002 Rmu_sc0022339.1_g000006 Rmu_sc0026537.1_g000002 Rmu_sc0027689.1_g000002 Rmu_sc0036222.1_g000001 Rmu_sc0040890.1_g000001 Rmu_ssc0000148.1_g000006 Rmu_ssc0000151.1_g000017 Rmu_ssc0000404.1_g000018 Rmu_ssc0000449.1_g000009
rosa_roxburghii Rroxscaffold_1G00017760 Rroxscaffold_1G00059150 Rroxscaffold_2G00142560 Rroxscaffold_3G00220440 Rroxscaffold_3G00231700 Rroxscaffold_3G00232400 Rroxscaffold_3G00274510 Rroxscaffold_4G00288790 Rroxscaffold_4G00305680 Rroxscaffold_4G00314880 Rroxscaffold_4G00314900 Rroxscaffold_5G00334590 Rroxscaffold_6G00394110 Rroxscaffold_6G00415860 Rroxscaffold_7G00168240 Rroxscaffold_7G00204400 Rroxscaffold_7G00207840
rosa_rugosa Rorug01G0034900 Rorug02G0079500 Rorug02G0229000 Rorug02G0229100 Rorug02G0291400 Rorug02G0298800 Rorug03G0046400 Rorug03G0064700 Rorug03G0077300 Rorug03G0199000 Rorug03G0200400 Rorug04G0205200 Rorug05G0025400 Rorug05G0127400 Rorug05G0192100 Rorug05G0453400 Rorug05G0538300 Rorug06G0035200 Rorug06G0241000 Rorug06G0268300 Rorug07G0120300 Rorug07G0145000 Rorug07G0209100 Rorug07G0240500 Rorug07G0271700
rosa_samantha Rh1AG179100 Rh1BG106900 Rh1BG163400 Rh1BG163500 Rh1BG323500 Rh2CG447900 Rh2DG503700 Rh3AG293600 Rh3CG229100 Rh3DG221500 Rh4AG106000 Rh4BG267700 Rh4CG062500 Rh4CG090100 Rh4CG114800 Rh5AG038400 Rh5BG395400 Rh5CG441700 Rh5CG572000 Rh6AG222400 Rh6AG264500 Rh6BG137400 Rh6BG225700 Rh6CG144300 Rh6DG087600 Rh6DG096000 Rh6DG362400 Rh6DG390200 Rh7AG207500 Rh7AG324700 Rh7AG388800 Rh7AG437100 Rh7BG019000 Rh7BG374600 Rh7CG028700 Rh7CG341500 Rh7CG408000 Rh7CG408300 Rh7DG354600
rosa_wichuraiana Rw0G009630 Rw0G012170 Rw4G022700 Rw5G028420 Rw5G029490 Rw6G007220 Rw6G007410 Rw6G017880 Rw7G012440 Rw7G021830 Rw7G027490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 318
AccB1I GGYRCC 1 cut(s) 318
AccII CGCG 1 cut(s) 657
AciI CCGC 2 cut(s) 655, 671
AclWI GGATC 6 cut(s) 323, 336, 578, 629, 631, 644
AcsI RAATTY 1 cut(s) 16
AfaI GTAC 2 cut(s) 320, 451
AfiI CCNNNNNNNGG 1 cut(s) 284
AgsI TTSAA 5 cut(s) 187, 221, 470, 520, 542
AjiI CACGTC 1 cut(s) 696
AjnI CCWGG 2 cut(s) 303, 763
AleI CACNNNNGTG 1 cut(s) 706
AluBI AGCT 8 cut(s) 32, 253, 485, 523, 588, 650, 662, 679
AluI AGCT 8 cut(s) 32, 253, 485, 523, 588, 650, 662, 679
Alw21I GWGCWC 2 cut(s) 135, 701
AlwI GGATC 6 cut(s) 323, 336, 578, 629, 631, 644
AlwNI CAGNNNCTG 1 cut(s) 485
Ama87I CYCGRG 1 cut(s) 642
AoxI GGCC 5 cut(s) 275, 711, 719, 757, 767
ApaI GGGCCC 1 cut(s) 771
ApeKI GCWGC 6 cut(s) 195, 288, 479, 482, 509, 668
ApoI RAATTY 1 cut(s) 16
AseI ATTAAT 1 cut(s) 581
Asp718I GGTACC 1 cut(s) 318
AspS9I GGNCC 4 cut(s) 276, 711, 767, 768
AsuC2I CCSGG 4 cut(s) 119, 619, 643, 644
AsuNHI GCTAGC 1 cut(s) 253
AvaI CYCGRG 1 cut(s) 642
AxyI CCTNAGG 1 cut(s) 380
BaeGI GKGCMC 2 cut(s) 215, 771
BamHI GGATCC 2 cut(s) 328, 636
BanI GGYRCC 1 cut(s) 318
BanII GRGCYC 1 cut(s) 771
Bbv12I GWGCWC 2 cut(s) 135, 701
BbvI GCAGC 6 cut(s) 207, 300, 491, 494, 521, 655
BccI CCATC 3 cut(s) 350, 733, 749
BceAI ACGGC 1 cut(s) 242
BciT130I CCWGG 2 cut(s) 305, 765
BcnI CCSGG 4 cut(s) 119, 619, 643, 644
BfaI CTAG 3 cut(s) 87, 254, 438
BfmI CTRYAG 2 cut(s) 426, 486
BisI GCNGC 7 cut(s) 196, 289, 480, 483, 510, 669, 672
BlsI GCNGC 7 cut(s) 197, 290, 481, 484, 511, 670, 673
Bme1390I CCNGG 6 cut(s) 119, 305, 619, 643, 644, 765
BmeT110I CYCGRG 1 cut(s) 642
BmgBI CACGTC 1 cut(s) 696
BmgT120I GGNCC 4 cut(s) 276, 711, 767, 768
BmiI GGNNCC 5 cut(s) 320, 330, 638, 769, 770
BmrFI CCNGG 6 cut(s) 119, 305, 619, 643, 644, 765
BmrI ACTGGG 1 cut(s) 273
BmtI GCTAGC 1 cut(s) 257
BmuI ACTGGG 1 cut(s) 273
BplI GAGNNNNNCTC 2 cut(s) 64, 96
BpmI CTGGAG 1 cut(s) 509
BpuEI CTTGAG 1 cut(s) 587
BpuMI CCSGG 4 cut(s) 119, 619, 643, 644
BsaJI CCNNGG 5 cut(s) 152, 641, 642, 763, 764
BsaWI WCCGGW 1 cut(s) 325
Bsc4I CCNNNNNNNGG 1 cut(s) 284
Bse1I ACTGG 2 cut(s) 279, 638
Bse21I CCTNAGG 1 cut(s) 380
BseBI CCWGG 2 cut(s) 305, 765
BseDI CCNNGG 5 cut(s) 152, 641, 642, 763, 764
BseGI GGATG 1 cut(s) 361
BseLI CCNNNNNNNGG 1 cut(s) 284
BseMII CTCAG 2 cut(s) 371, 680
BseNI ACTGG 2 cut(s) 279, 638
BseRI GAGGAG 1 cut(s) 397
BseSI GKGCMC 2 cut(s) 215, 771
BseXI GCAGC 6 cut(s) 207, 300, 491, 494, 521, 655
Bsh1236I CGCG 1 cut(s) 657
BshFI GGCC 5 cut(s) 277, 713, 721, 759, 769
BshNI GGYRCC 1 cut(s) 318
BsiHKAI GWGCWC 2 cut(s) 135, 701
BsiHKCI CYCGRG 1 cut(s) 642
BsiSI CCGG 4 cut(s) 119, 326, 618, 643
BslI CCNNNNNNNGG 1 cut(s) 284
BsnI GGCC 5 cut(s) 277, 713, 721, 759, 769
BsoBI CYCGRG 1 cut(s) 642
Bsp120I GGGCCC 1 cut(s) 767
Bsp1286I GDGCHC 4 cut(s) 135, 215, 701, 771
Bsp143I GATC 6 cut(s) 177, 328, 345, 570, 621, 636
BspACI CCGC 2 cut(s) 655, 671
BspANI GGCC 5 cut(s) 277, 713, 721, 759, 769
BspCNI CTCAG 2 cut(s) 372, 681
BspFNI CGCG 1 cut(s) 657
BspLI GGNNCC 5 cut(s) 320, 330, 638, 769, 770
BspOI GCTAGC 1 cut(s) 257
BspPI GGATC 6 cut(s) 323, 336, 578, 629, 631, 644
BspT107I GGYRCC 1 cut(s) 318
BsrI ACTGG 2 cut(s) 279, 638
BssECI CCNNGG 5 cut(s) 152, 641, 642, 763, 764
BssMI GATC 6 cut(s) 177, 328, 345, 570, 621, 636
BssT1I CCWWGG 1 cut(s) 152
Bst2UI CCWGG 2 cut(s) 305, 765
Bst4CI ACNGT 3 cut(s) 340, 551, 708
Bst6I CTCTTC 2 cut(s) 87, 738
BstC8I GCNNGC 2 cut(s) 255, 681
BstDEI CTNAG 2 cut(s) 380, 689
BstF5I GGATG 1 cut(s) 361
BstFNI CGCG 1 cut(s) 657
BstKTI GATC 6 cut(s) 180, 331, 348, 573, 624, 639
BstMBI GATC 6 cut(s) 177, 328, 345, 570, 621, 636
BstMWI GCNNNNNNNGC 4 cut(s) 96, 368, 668, 680
BstNI CCWGG 2 cut(s) 305, 765
BstSCI CCNGG 6 cut(s) 117, 303, 617, 641, 642, 763
BstSFI CTRYAG 2 cut(s) 426, 486
BstSLI GKGCMC 2 cut(s) 215, 771
BstUI CGCG 1 cut(s) 657
BstV1I GCAGC 6 cut(s) 207, 300, 491, 494, 521, 655
BstX2I RGATCY 3 cut(s) 328, 570, 636
BstXI CCANNNNNNTGG 1 cut(s) 472
BstYI RGATCY 3 cut(s) 328, 570, 636
Bsu36I CCTNAGG 1 cut(s) 380
BsuRI GGCC 5 cut(s) 277, 713, 721, 759, 769
BtrI CACGTC 1 cut(s) 696
BtsCI GGATG 1 cut(s) 361
BtsI GCAGTG 1 cut(s) 133
BtsIMutI CAGTG 2 cut(s) 133, 713
Cac8I GCNNGC 2 cut(s) 255, 681
CaiI CAGNNNCTG 1 cut(s) 485
Cfr13I GGNCC 4 cut(s) 276, 711, 767, 768
Cfr9I CCCGGG 1 cut(s) 642
CseI GACGC 1 cut(s) 674
CsiI ACCWGGT 1 cut(s) 303
Csp6I GTAC 2 cut(s) 319, 450
CspCI CAANNNNNGTGG 2 cut(s) 88, 123
CviAII CATG 2 cut(s) 191, 446
CviQI GTAC 2 cut(s) 319, 450
DdeI CTNAG 2 cut(s) 380, 689
DpnI GATC 6 cut(s) 179, 330, 347, 572, 623, 638
DpnII GATC 6 cut(s) 177, 328, 345, 570, 621, 636
Eam1104I CTCTTC 2 cut(s) 87, 738
EarI CTCTTC 2 cut(s) 87, 738
Eco130I CCWWGG 1 cut(s) 152
Eco147I AGGCCT 1 cut(s) 721
Eco24I GRGCYC 1 cut(s) 771
Eco81I CCTNAGG 1 cut(s) 380
Eco88I CYCGRG 1 cut(s) 642
EcoO109I RGGNCCY 2 cut(s) 767, 768
EcoRII CCWGG 2 cut(s) 303, 763
EcoT14I CCWWGG 1 cut(s) 152
EcoT38I GRGCYC 1 cut(s) 771
ErhI CCWWGG 1 cut(s) 152
FaeI CATG 2 cut(s) 194, 449
FaiI YATR 6 cut(s) 97, 169, 192, 336, 447, 456
FatI CATG 2 cut(s) 190, 445
Fnu4HI GCNGC 7 cut(s) 196, 289, 480, 483, 510, 669, 672
FokI GGATG 1 cut(s) 368
FriOI GRGCYC 1 cut(s) 771
Fsp4HI GCNGC 7 cut(s) 196, 289, 480, 483, 510, 669, 672
FspBI CTAG 3 cut(s) 87, 254, 438
GluI GCNGC 7 cut(s) 196, 289, 480, 483, 510, 669, 672
GsuI CTGGAG 1 cut(s) 509
HaeIII GGCC 5 cut(s) 277, 713, 721, 759, 769
HapII CCGG 4 cut(s) 119, 326, 618, 643
HgaI GACGC 1 cut(s) 674
Hin1II CATG 2 cut(s) 194, 449
HincII GTYRAC 2 cut(s) 262, 301
HindII GTYRAC 2 cut(s) 262, 301
HindIII AAGCTT 1 cut(s) 677
HinfI GANTC 2 cut(s) 187, 263
HpaII CCGG 4 cut(s) 119, 326, 618, 643
Hpy166II GTNNAC 2 cut(s) 262, 301
Hpy188III TCNNGA 3 cut(s) 13, 526, 554
Hpy8I GTNNAC 2 cut(s) 262, 301
HpyAV CCTTC 1 cut(s) 149
HpyCH4III ACNGT 3 cut(s) 340, 551, 708
HpyCH4IV ACGT 1 cut(s) 695
HpyCH4V TGCA 3 cut(s) 99, 566, 683
HpyF10VI GCNNNNNNNGC 4 cut(s) 96, 368, 668, 680
HpyF3I CTNAG 2 cut(s) 380, 689
HpySE526I ACGT 1 cut(s) 695
Hsp92II CATG 2 cut(s) 194, 449
KpnI GGTACC 1 cut(s) 322
Kzo9I GATC 6 cut(s) 177, 328, 345, 570, 621, 636
LmnI GCTCC 1 cut(s) 528
Lsp1109I GCAGC 6 cut(s) 207, 300, 491, 494, 521, 655
MabI ACCWGGT 1 cut(s) 303
MaeI CTAG 3 cut(s) 87, 254, 438
MaeII ACGT 1 cut(s) 695
MaeIII GTNAC 2 cut(s) 374, 545
MalI GATC 6 cut(s) 179, 330, 347, 572, 623, 638
MboI GATC 6 cut(s) 177, 328, 345, 570, 621, 636
MboII GAAGA 4 cut(s) 74, 134, 720, 725
MflI RGATCY 3 cut(s) 328, 570, 636
MhlI GDGCHC 4 cut(s) 135, 215, 701, 771
MluCI AATT 2 cut(s) 16, 457
MlyI GAGTC 1 cut(s) 257
MmeI TCCRAC 1 cut(s) 253
MnlI CCTC 9 cut(s) 66, 67, 375, 410, 469, 487, 684, 732, 770
MseI TTAA 4 cut(s) 342, 500, 581, 746
MslI CAYNNNNRTG 2 cut(s) 470, 706
MspA1I CMGCKG 1 cut(s) 485
MspI CCGG 4 cut(s) 119, 326, 618, 643
MspR9I CCNGG 6 cut(s) 119, 305, 619, 643, 644, 765
MvaI CCWGG 2 cut(s) 305, 765
MvnI CGCG 1 cut(s) 657
MwoI GCNNNNNNNGC 4 cut(s) 96, 368, 668, 680
NciI CCSGG 4 cut(s) 119, 619, 643, 644
NdeII GATC 6 cut(s) 177, 328, 345, 570, 621, 636
NheI GCTAGC 1 cut(s) 253
NlaIII CATG 2 cut(s) 194, 449
NlaIV GGNNCC 5 cut(s) 320, 330, 638, 769, 770
NmuCI GTSAC 1 cut(s) 545
OliI CACNNNNGTG 1 cut(s) 706
PasI CCCWGGG 1 cut(s) 764
PceI AGGCCT 1 cut(s) 721
PfeI GAWTC 1 cut(s) 187
PflFI GACNNNGTC 1 cut(s) 305
PfoI TCCNGGA 2 cut(s) 117, 617
PkrI GCNGC 7 cut(s) 197, 290, 481, 484, 511, 670, 673
PleI GAGTC 1 cut(s) 257
PpsI GAGTC 1 cut(s) 257
PshBI ATTAAT 1 cut(s) 581
Psp6I CCWGG 2 cut(s) 303, 763
PspGI CCWGG 2 cut(s) 303, 763
PspN4I GGNNCC 5 cut(s) 320, 330, 638, 769, 770
PspOMI GGGCCC 1 cut(s) 767
PspPI GGNCC 4 cut(s) 276, 711, 767, 768
PstNI CAGNNNCTG 1 cut(s) 485
PsuI RGATCY 3 cut(s) 328, 570, 636
PsyI GACNNNGTC 1 cut(s) 305
PvuII CAGCTG 1 cut(s) 485
RsaI GTAC 2 cut(s) 320, 451
RsaNI GTAC 2 cut(s) 319, 450
RseI CAYNNNNRTG 2 cut(s) 470, 706
SaqAI TTAA 4 cut(s) 342, 500, 581, 746
SatI GCNGC 7 cut(s) 196, 289, 480, 483, 510, 669, 672
Sau3AI GATC 6 cut(s) 177, 328, 345, 570, 621, 636
Sau96I GGNCC 4 cut(s) 276, 711, 767, 768
SchI GAGTC 1 cut(s) 257
ScrFI CCNGG 6 cut(s) 119, 305, 619, 643, 644, 765
SduI GDGCHC 4 cut(s) 135, 215, 701, 771
SexAI ACCWGGT 1 cut(s) 303
SfcI CTRYAG 2 cut(s) 426, 486
SmaI CCCGGG 1 cut(s) 644
SmiMI CAYNNNNRTG 2 cut(s) 470, 706
SmlI CTYRAG 1 cut(s) 602
SmoI CTYRAG 1 cut(s) 602
Sse9I AATT 2 cut(s) 16, 457
SseBI AGGCCT 1 cut(s) 721
SsiI CCGC 2 cut(s) 655, 671
SspI AATATT 1 cut(s) 532
SspMI CTAG 3 cut(s) 87, 254, 438
StuI AGGCCT 1 cut(s) 721
StyD4I CCNGG 6 cut(s) 117, 303, 617, 641, 642, 763
StyI CCWWGG 1 cut(s) 152
TaaI ACNGT 3 cut(s) 340, 551, 708
TaiI ACGT 1 cut(s) 698
TaqI TCGA 1 cut(s) 14
TasI AATT 2 cut(s) 16, 457
TauI GCSGC 1 cut(s) 674
TfiI GAWTC 1 cut(s) 187
Tru1I TTAA 4 cut(s) 342, 500, 581, 746
Tru9I TTAA 4 cut(s) 342, 500, 581, 746
TscAI CASTG 2 cut(s) 140, 713
TseFI GTSAC 1 cut(s) 545
TseI GCWGC 6 cut(s) 195, 288, 479, 482, 509, 668
Tsp45I GTSAC 1 cut(s) 545
TspDTI ATGAA 1 cut(s) 434
TspMI CCCGGG 1 cut(s) 642
TspRI CASTG 2 cut(s) 140, 713
Tth111I GACNNNGTC 1 cut(s) 305
VspI ATTAAT 1 cut(s) 581
XapI RAATTY 1 cut(s) 16
XmaI CCCGGG 1 cut(s) 642
XspI CTAG 3 cut(s) 87, 254, 438
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.