ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 23 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 120, 322 |
| AgsI | TTSAA | 3 cut(s) | 23, 175, 210 |
| AluBI | AGCT | 4 cut(s) | 18, 64, 275, 293 |
| AluI | AGCT | 4 cut(s) | 18, 64, 275, 293 |
| Alw26I | GTCTC | 1 cut(s) | 105 |
| AoxI | GGCC | 2 cut(s) | 56, 249 |
| ApeKI | GCWGC | 3 cut(s) | 47, 191, 266 |
| ApoI | RAATTY | 1 cut(s) | 23 |
| AspS9I | GGNCC | 1 cut(s) | 250 |
| AsuII | TTCGAA | 1 cut(s) | 148 |
| BauI | CACGAG | 1 cut(s) | 201 |
| BbvI | GCAGC | 3 cut(s) | 59, 203, 253 |
| BccI | CCATC | 2 cut(s) | 114, 241 |
| BcoDI | GTCTC | 1 cut(s) | 105 |
| BfmI | CTRYAG | 1 cut(s) | 267 |
| BisI | GCNGC | 3 cut(s) | 48, 192, 267 |
| BlsI | GCNGC | 3 cut(s) | 49, 193, 268 |
| BmgT120I | GGNCC | 1 cut(s) | 250 |
| BmiI | GGNNCC | 1 cut(s) | 252 |
| BmsI | GCATC | 2 cut(s) | 151, 173 |
| BpmI | CTGGAG | 1 cut(s) | 100 |
| Bpu10I | CCTNAGC | 1 cut(s) | 60 |
| Bpu14I | TTCGAA | 1 cut(s) | 148 |
| BpuEI | CTTGAG | 1 cut(s) | 331 |
| BsaAI | YACGTR | 1 cut(s) | 297 |
| BsaI | GGTCTC | 1 cut(s) | 105 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 85, 115 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 120, 322 |
| Bse3DI | GCAATG | 3 cut(s) | 243, 267, 317 |
| BseGI | GGATG | 1 cut(s) | 109 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 120, 322 |
| BseMI | GCAATG | 3 cut(s) | 243, 267, 317 |
| BseMII | CTCAG | 1 cut(s) | 51 |
| BseRI | GAGGAG | 2 cut(s) | 93, 96 |
| BseXI | GCAGC | 3 cut(s) | 59, 203, 253 |
| BshFI | GGCC | 2 cut(s) | 58, 251 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 120, 322 |
| BsmAI | GTCTC | 1 cut(s) | 105 |
| BsmI | GAATGC | 1 cut(s) | 145 |
| BsnI | GGCC | 2 cut(s) | 58, 251 |
| Bso31I | GGTCTC | 1 cut(s) | 105 |
| Bsp119I | TTCGAA | 1 cut(s) | 148 |
| BspANI | GGCC | 2 cut(s) | 58, 251 |
| BspCNI | CTCAG | 1 cut(s) | 52 |
| BspLI | GGNNCC | 1 cut(s) | 252 |
| BspMAI | CTGCAG | 1 cut(s) | 271 |
| BspT104I | TTCGAA | 1 cut(s) | 148 |
| BspTNI | GGTCTC | 1 cut(s) | 105 |
| BsrDI | GCAATG | 3 cut(s) | 243, 267, 317 |
| BssSI | CACGAG | 1 cut(s) | 201 |
| Bst2BI | CACGAG | 1 cut(s) | 201 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 197, 266 |
| BstBAI | YACGTR | 1 cut(s) | 297 |
| BstBI | TTCGAA | 1 cut(s) | 148 |
| BstC8I | GCNNGC | 3 cut(s) | 52, 56, 229 |
| BstDEI | CTNAG | 2 cut(s) | 60, 366 |
| BstF5I | GGATG | 1 cut(s) | 109 |
| BstMAI | GTCTC | 1 cut(s) | 105 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 15, 197, 233, 257, 266, 272 |
| BstSFI | CTRYAG | 1 cut(s) | 267 |
| BstSNI | TACGTA | 1 cut(s) | 297 |
| BstV1I | GCAGC | 3 cut(s) | 59, 203, 253 |
| BsuRI | GGCC | 2 cut(s) | 58, 251 |
| BtsCI | GGATG | 1 cut(s) | 109 |
| Cac8I | GCNNGC | 3 cut(s) | 52, 56, 229 |
| Cfr13I | GGNCC | 1 cut(s) | 250 |
| CviAII | CATG | 2 cut(s) | 37, 168 |
| CviJI | RGCY | 8 cut(s) | 18, 58, 64, 251, 266, 275, 281, 293 |
| CviKI_1 | RGCY | 8 cut(s) | 18, 58, 64, 251, 266, 275, 281, 293 |
| DdeI | CTNAG | 2 cut(s) | 60, 366 |
| Eco105I | TACGTA | 1 cut(s) | 297 |
| Eco147I | AGGCCT | 1 cut(s) | 58 |
| Eco31I | GGTCTC | 1 cut(s) | 105 |
| EcoRI | GAATTC | 1 cut(s) | 23 |
| EcoT22I | ATGCAT | 1 cut(s) | 166 |
| FaeI | CATG | 2 cut(s) | 40, 171 |
| FaiI | YATR | 3 cut(s) | 38, 137, 169 |
| FatI | CATG | 2 cut(s) | 36, 167 |
| Fnu4HI | GCNGC | 3 cut(s) | 48, 192, 267 |
| FokI | GGATG | 1 cut(s) | 96 |
| Fsp4HI | GCNGC | 3 cut(s) | 48, 192, 267 |
| GluI | GCNGC | 3 cut(s) | 48, 192, 267 |
| GsuI | CTGGAG | 1 cut(s) | 100 |
| HaeIII | GGCC | 2 cut(s) | 58, 251 |
| Hin1II | CATG | 2 cut(s) | 40, 171 |
| HindIII | AAGCTT | 1 cut(s) | 273 |
| HinfI | GANTC | 5 cut(s) | 124, 179, 206, 344, 360 |
| Hpy188I | TCNGA | 1 cut(s) | 343 |
| Hpy188III | TCNNGA | 3 cut(s) | 117, 203, 348 |
| HpyAV | CCTTC | 1 cut(s) | 264 |
| HpyCH4IV | ACGT | 1 cut(s) | 296 |
| HpyCH4V | TGCA | 6 cut(s) | 47, 85, 164, 260, 269, 322 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 15, 197, 233, 257, 266, 272 |
| HpyF3I | CTNAG | 2 cut(s) | 60, 366 |
| HpySE526I | ACGT | 1 cut(s) | 296 |
| Hsp92II | CATG | 2 cut(s) | 40, 171 |
| LpnPI | CCDG | 5 cut(s) | 40, 72, 130, 213, 308 |
| Lsp1109I | GCAGC | 3 cut(s) | 59, 203, 253 |
| LweI | GCATC | 2 cut(s) | 151, 173 |
| MaeII | ACGT | 1 cut(s) | 296 |
| MboII | GAAGA | 3 cut(s) | 25, 253, 330 |
| MfeI | CAATTG | 2 cut(s) | 80, 195 |
| MluCI | AATT | 3 cut(s) | 23, 80, 195 |
| MlyI | GAGTC | 3 cut(s) | 173, 338, 354 |
| MnlI | CCTC | 3 cut(s) | 114, 117, 124 |
| Mph1103I | ATGCAT | 1 cut(s) | 166 |
| MslI | CAYNNNNRTG | 1 cut(s) | 35 |
| MunI | CAATTG | 2 cut(s) | 80, 195 |
| Mva1269I | GAATGC | 1 cut(s) | 145 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 15, 197, 233, 257, 266, 272 |
| NlaIII | CATG | 2 cut(s) | 40, 171 |
| NlaIV | GGNNCC | 1 cut(s) | 252 |
| NsiI | ATGCAT | 1 cut(s) | 166 |
| NspV | TTCGAA | 1 cut(s) | 148 |
| PceI | AGGCCT | 1 cut(s) | 58 |
| PctI | GAATGC | 1 cut(s) | 145 |
| PfeI | GAWTC | 2 cut(s) | 124, 206 |
| PkrI | GCNGC | 3 cut(s) | 49, 193, 268 |
| PleI | GAGTC | 3 cut(s) | 173, 338, 354 |
| PpsI | GAGTC | 3 cut(s) | 173, 338, 354 |
| Ppu21I | YACGTR | 1 cut(s) | 297 |
| PspN4I | GGNNCC | 1 cut(s) | 252 |
| PspPI | GGNCC | 1 cut(s) | 250 |
| PstI | CTGCAG | 1 cut(s) | 271 |
| RseI | CAYNNNNRTG | 1 cut(s) | 35 |
| SatI | GCNGC | 3 cut(s) | 48, 192, 267 |
| Sau96I | GGNCC | 1 cut(s) | 250 |
| SchI | GAGTC | 3 cut(s) | 173, 338, 354 |
| SetI | ASST | 6 cut(s) | 20, 66, 136, 277, 295, 299 |
| SfaNI | GCATC | 2 cut(s) | 151, 173 |
| SfcI | CTRYAG | 1 cut(s) | 267 |
| SfuI | TTCGAA | 1 cut(s) | 148 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 35 |
| SmlI | CTYRAG | 1 cut(s) | 346 |
| SmoI | CTYRAG | 1 cut(s) | 346 |
| SnaBI | TACGTA | 1 cut(s) | 297 |
| Sse9I | AATT | 3 cut(s) | 23, 80, 195 |
| SseBI | AGGCCT | 1 cut(s) | 58 |
| StuI | AGGCCT | 1 cut(s) | 58 |
| TaiI | ACGT | 1 cut(s) | 299 |
| TaqI | TCGA | 2 cut(s) | 148, 358 |
| TaqII | GACCGA | 1 cut(s) | 87 |
| TasI | AATT | 3 cut(s) | 23, 80, 195 |
| TfiI | GAWTC | 2 cut(s) | 124, 206 |
| TseI | GCWGC | 3 cut(s) | 47, 191, 266 |
| TspDTI | ATGAA | 4 cut(s) | 16, 25, 152, 254 |
| XapI | RAATTY | 1 cut(s) | 23 |
| Zsp2I | ATGCAT | 1 cut(s) | 166 |