Prupe.2G216600_v2.0.a1

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000093
Physical Location & Seq
Forward (+)
24696359 .. 24697436
1078 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G216600.1

Sequence Viewer

Length: 771 bp
ATGCCTTTCTACCTTTCAATTTGTGTGGATCGCTGGTTCACTGGACTGTTAAATAGTCAGATGTTTTCCAAATCCGAAAGAGTATGGGTTTTGTCCTTGGTTAGTTTTATCTCGTGGGAGATATGGAAAGCAAGGTGCAAGTTTCTTTTTGAGGACATTACAATCGATCCCAGATGTGTGGTGGAACGGGCGGCCTCAGCAGCAGAGGAATTTGATGTGCTGAGGCGTCATGCAATCTCCACCAGAAACGGGGCTGGTGTTTTCTCCCAACCCACTGATATTTGGAAACCCCCTGTTAACGGTGCAATTAAGGTCAATTTCGATGCGGCTTGGAAAAACCATGAGGCAGGATTGGGGGTGGTGATGAGGAATCATAATAAGGATTTCTGCTATGGTTTTGCTAGTAAACGATGTTGTAATAGTGCACTGAATGCAGAAACTGAAGCAGCTATCGAGGCTCTAAGATGCGCAAGTTTGAGAGGTTACTCAAAGATAGAGATGGAATCAGACTCAAAAGTCCTCATTGATAATATCAAAGGTAATGTATGCACGGAGGCCTGGACCATTCTCCCTTTGCTTGATGAGATCAGACGCCTAAGTGCAGGGTTCTCTGACGTGGAATGGTGTTGGATCCCTCGTGGTGCAAATCGCGCCGCTCACGTGACGGCGGCGATAGGATTAAGGGCGGTGTGTCCGCAAGGATGGGCTAATCAGCCACCTCCGTCCCTGGTGCGGGTTCTGGCTTCTGATGGACTTCCTAGTCCCCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

257

Amino Acids

28.52

Weight (kDa)

8.03

Isoelectric Point (pI)

45.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000093)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G09490
fragaria_vesca FvH4_1g23791 FvH4_2g01641 FvH4_2g04612 FvH4_2g06831 FvH4_2g07841 FvH4_2g13581 FvH4_2g27220 FvH4_2g30621 FvH4_2g34753 FvH4_3g10392 FvH4_3g24291 FvH4_3g25030 FvH4_3g29361 FvH4_3g31372 FvH4_3g32402 FvH4_3g43651 FvH4_4g03830 FvH4_4g05481 FvH4_4g20431 FvH4_4g21421 FvH4_4g25931 FvH4_5g08801 FvH4_5g21021 FvH4_5g26254 FvH4_5g30931 FvH4_5g31281 FvH4_5g33581 FvH4_5g35622 FvH4_6g02100 FvH4_6g07963 FvH4_6g11620 FvH4_6g16031 FvH4_6g19041 FvH4_6g24211 FvH4_6g24271 FvH4_6g30670 FvH4_6g49540 FvH4_7g25914
malus_domestica MD03G1245200.v1.1 MD04G1168000.v1.1 MD09G1242600.v1.1 MD15G1334000.v1.1 MD17G1165700.v1.1
prunus_persica Prupe.1G073500_v2.0.a1 Prupe.1G283700_v2.0.a1 Prupe.1G524100_v2.0.a1 Prupe.2G022700_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G044300_v2.0.a1 Prupe.2G048800_v2.0.a1 Prupe.2G092000_v2.0.a1 Prupe.2G216500_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.3G103400_v2.0.a1 Prupe.3G143300_v2.0.a1 Prupe.3G190000_v2.0.a1 Prupe.3G219800_v2.0.a1 Prupe.4G177800_v2.0.a1 Prupe.4G261300_v2.0.a1 Prupe.5G044600_v2.0.a1 Prupe.5G067400_v2.0.a1 Prupe.7G083900_v2.0.a1 Prupe.7G120900_v2.0.a1 Prupe.8G032200_v2.0.a1 Prupe.8G036100_v2.0.a1 Prupe.8G042700_v2.0.a1
pyrus_communis pycom01g21710 pycom02g19770 pycom03g05120 pycom05g01370 pycom05g08780 pycom05g10120 pycom07g01370 pycom07g05930 pycom08g15760 pycom08g18090 pycom08g21060 pycom09g03880 pycom10g03870 pycom13g22240 pycom16g05120 pycom16g17170 pycom17g12180 pycom17g16290 pycom17g21230 pycom17g24990 pycom215g00100
rosa_chinensis RchiOBHm_Chr1g0323031 RchiOBHm_Chr1g0324391 RchiOBHm_Chr1g0326401 RchiOBHm_Chr1g0327811 RchiOBHm_Chr1g0332521 RchiOBHm_Chr1g0336501 RchiOBHm_Chr1g0346021 RchiOBHm_Chr1g0347191 RchiOBHm_Chr1g0367181 RchiOBHm_Chr2g0089441 RchiOBHm_Chr2g0115441 RchiOBHm_Chr3g0490691 RchiOBHm_Chr4g0395251 RchiOBHm_Chr4g0398081 RchiOBHm_Chr4g0409451 RchiOBHm_Chr4g0413041 RchiOBHm_Chr4g0415471 RchiOBHm_Chr4g0420961 RchiOBHm_Chr5g0040301 RchiOBHm_Chr5g0070651 RchiOBHm_Chr6g0263011 RchiOBHm_Chr6g0270721 RchiOBHm_Chr6g0277111 RchiOBHm_Chr7g0179771 RchiOBHm_Chr7g0223051 RchiOBHm_Chr7g0225031 RchiOBHm_Chr7g0225091
rosa_laevigata RLG00000001668 RLG00000001672 RLG00000001676 RLG00000007762 RLG00000008994 RLG00000011117 RLG00000013729 RLG00000013839 RLG00000014759 RLG00000016638 RLG00000018535 RLG00000018614 RLG00000018646 RLG00000020679 RLG00000023337 RLG00000029348 RLG00000035891 RLG00000035912
rosa_multiflora Rmu_co8152500.1_g000001 Rmu_co8203314.1_g000001 Rmu_co8383183.1_g000001 Rmu_sc0000293.1_g000033 Rmu_sc0000367.1_g000226 Rmu_sc0000512.1_g000023 Rmu_sc0000594.1_g000059 Rmu_sc0000654.1_g000022 Rmu_sc0000654.1_g000047 Rmu_sc0000706.1_g000037 Rmu_sc0001348.1_g000008 Rmu_sc0001385.1_g000024 Rmu_sc0001405.1_g000002 Rmu_sc0001521.1_g000048 Rmu_sc0001932.1_g000008 Rmu_sc0001932.1_g000009 Rmu_sc0002535.1_g000011 Rmu_sc0002908.1_g000019 Rmu_sc0003709.1_g000004 Rmu_sc0003882.1_g000054 Rmu_sc0004035.1_g000007 Rmu_sc0004041.1_g000007 Rmu_sc0004288.1_g000011 Rmu_sc0004569.1_g000004 Rmu_sc0004677.1_g000016 Rmu_sc0004834.1_g000010 Rmu_sc0005193.1_g000008 Rmu_sc0005354.1_g000009 Rmu_sc0006514.1_g000021 Rmu_sc0006691.1_g000001 Rmu_sc0006888.1_g000021 Rmu_sc0006889.1_g000013 Rmu_sc0008096.1_g000017 Rmu_sc0008378.1_g000003 Rmu_sc0009127.1_g000005 Rmu_sc0009191.1_g000016 Rmu_sc0009687.1_g000018 Rmu_sc0009709.1_g000005 Rmu_sc0009880.1_g000015 Rmu_sc0011710.1_g000001 Rmu_sc0012615.1_g000004 Rmu_sc0016091.1_g000002 Rmu_sc0022339.1_g000006 Rmu_sc0026537.1_g000002 Rmu_sc0027689.1_g000002 Rmu_sc0036222.1_g000001 Rmu_sc0040890.1_g000001 Rmu_ssc0000148.1_g000006 Rmu_ssc0000151.1_g000017 Rmu_ssc0000404.1_g000018 Rmu_ssc0000449.1_g000009
rosa_roxburghii Rroxscaffold_1G00017760 Rroxscaffold_1G00059150 Rroxscaffold_2G00142560 Rroxscaffold_3G00220440 Rroxscaffold_3G00231700 Rroxscaffold_3G00232400 Rroxscaffold_3G00274510 Rroxscaffold_4G00288790 Rroxscaffold_4G00305680 Rroxscaffold_4G00314880 Rroxscaffold_4G00314900 Rroxscaffold_5G00334590 Rroxscaffold_6G00394110 Rroxscaffold_6G00415860 Rroxscaffold_7G00168240 Rroxscaffold_7G00204400 Rroxscaffold_7G00207840
rosa_rugosa Rorug01G0034900 Rorug02G0079500 Rorug02G0229000 Rorug02G0229100 Rorug02G0291400 Rorug02G0298800 Rorug03G0046400 Rorug03G0064700 Rorug03G0077300 Rorug03G0199000 Rorug03G0200400 Rorug04G0205200 Rorug05G0025400 Rorug05G0127400 Rorug05G0192100 Rorug05G0453400 Rorug05G0538300 Rorug06G0035200 Rorug06G0241000 Rorug06G0268300 Rorug07G0120300 Rorug07G0145000 Rorug07G0209100 Rorug07G0240500 Rorug07G0271700
rosa_samantha Rh1AG179100 Rh1BG106900 Rh1BG163400 Rh1BG163500 Rh1BG323500 Rh2CG447900 Rh2DG503700 Rh3AG293600 Rh3CG229100 Rh3DG221500 Rh4AG106000 Rh4BG267700 Rh4CG062500 Rh4CG090100 Rh4CG114800 Rh5AG038400 Rh5BG395400 Rh5CG441700 Rh5CG572000 Rh6AG222400 Rh6AG264500 Rh6BG137400 Rh6BG225700 Rh6CG144300 Rh6DG087600 Rh6DG096000 Rh6DG362400 Rh6DG390200 Rh7AG207500 Rh7AG324700 Rh7AG388800 Rh7AG437100 Rh7BG019000 Rh7BG374600 Rh7CG028700 Rh7CG341500 Rh7CG408000 Rh7CG408300 Rh7DG354600
rosa_wichuraiana Rw0G009630 Rw0G012170 Rw4G022700 Rw5G028420 Rw5G029490 Rw6G007220 Rw6G007410 Rw6G017880 Rw7G012440 Rw7G021830 Rw7G027490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 515, 759
Acc16I TGCGCA 1 cut(s) 469
AccBSI CCGCTC 1 cut(s) 656
AccII CGCG 1 cut(s) 651
AciI CCGC 7 cut(s) 191, 326, 654, 668, 686, 695, 733
AclWI GGATC 4 cut(s) 36, 161, 625, 638
AcsI RAATTY 1 cut(s) 209
AcuI CTGAAG 1 cut(s) 462
AcvI CACGTG 1 cut(s) 661
AcyI GRCGYC 2 cut(s) 226, 592
AfiI CCNNNNNNNGG 4 cut(s) 249, 299, 732, 733
AgsI TTSAA 1 cut(s) 18
AjiI CACGTC 1 cut(s) 616
AjnI CCWGG 2 cut(s) 557, 726
AloI GAACNNNNNNTCC 2 cut(s) 20, 52
AluBI AGCT 1 cut(s) 449
AluI AGCT 1 cut(s) 449
Alw21I GWGCWC 1 cut(s) 427
Alw44I GTGCAC 1 cut(s) 423
AlwI GGATC 4 cut(s) 36, 161, 625, 638
AlwNI CAGNNNCTG 1 cut(s) 440
AoxI GGCC 2 cut(s) 192, 555
ApaLI GTGCAC 1 cut(s) 423
ApeKI GCWGC 2 cut(s) 200, 446
ApoI RAATTY 1 cut(s) 209
AspLEI GCGC 2 cut(s) 470, 653
AspS9I GGNCC 1 cut(s) 561
AsuHPI GGTGA 1 cut(s) 373
AvaII GGWCC 1 cut(s) 561
BaeGI GKGCMC 1 cut(s) 427
BamHI GGATCC 1 cut(s) 630
BauI CACGAG 2 cut(s) 112, 636
BbrPI CACGTG 1 cut(s) 661
Bbv12I GWGCWC 1 cut(s) 427
BbvCI CCTCAGC 2 cut(s) 196, 221
BbvI GCAGC 2 cut(s) 212, 458
BccI CCATC 3 cut(s) 493, 696, 743
BceAI ACGGC 1 cut(s) 681
BciT130I CCWGG 2 cut(s) 559, 728
BfaI CTAG 2 cut(s) 402, 759
BisI GCNGC 6 cut(s) 192, 201, 327, 447, 654, 669
BlsI GCNGC 6 cut(s) 193, 202, 328, 448, 655, 670
Bme1390I CCNGG 2 cut(s) 559, 728
Bme18I GGWCC 1 cut(s) 561
BmgBI CACGTC 1 cut(s) 616
BmgT120I GGNCC 1 cut(s) 561
BmiI GGNNCC 1 cut(s) 632
BmrFI CCNGG 2 cut(s) 559, 728
BmsI GCATC 2 cut(s) 313, 455
Bpu10I CCTNAGC 2 cut(s) 196, 221
Bsa29I ATCGAT 1 cut(s) 165
BsaAI YACGTR 1 cut(s) 661
BsaHI GRCGYC 2 cut(s) 226, 592
BsaJI CCNNGG 2 cut(s) 96, 726
Bsc4I CCNNNNNNNGG 4 cut(s) 249, 299, 732, 733
Bse1I ACTGG 1 cut(s) 46
BseBI CCWGG 2 cut(s) 559, 728
BseCI ATCGAT 1 cut(s) 165
BseDI CCNNGG 2 cut(s) 96, 726
BseGI GGATG 1 cut(s) 707
BseLI CCNNNNNNNGG 4 cut(s) 249, 299, 732, 733
BseMII CTCAG 2 cut(s) 210, 212
BseNI ACTGG 1 cut(s) 46
BseSI GKGCMC 1 cut(s) 427
BseXI GCAGC 2 cut(s) 212, 458
BsgI GTGCAG 1 cut(s) 621
Bsh1236I CGCG 1 cut(s) 651
BshFI GGCC 2 cut(s) 194, 557
BshVI ATCGAT 1 cut(s) 165
BsiHKAI GWGCWC 1 cut(s) 427
BslFI GGGAC 2 cut(s) 709, 747
BslI CCNNNNNNNGG 4 cut(s) 249, 299, 732, 733
BsmFI GGGAC 2 cut(s) 709, 747
BsmI GAATGC 1 cut(s) 436
BsnI GGCC 2 cut(s) 194, 557
Bsp1286I GDGCHC 1 cut(s) 427
Bsp143I GATC 4 cut(s) 28, 166, 585, 630
BspACI CCGC 7 cut(s) 191, 326, 654, 668, 686, 695, 733
BspANI GGCC 2 cut(s) 194, 557
BspCNI CTCAG 2 cut(s) 209, 213
BspDI ATCGAT 1 cut(s) 165
BspFNI CGCG 1 cut(s) 651
BspLI GGNNCC 1 cut(s) 632
BspPI GGATC 4 cut(s) 36, 161, 625, 638
BsrBI CCGCTC 1 cut(s) 656
BsrI ACTGG 1 cut(s) 46
BssECI CCNNGG 2 cut(s) 96, 726
BssMI GATC 4 cut(s) 28, 166, 585, 630
BssNI GRCGYC 2 cut(s) 226, 592
BssSI CACGAG 2 cut(s) 112, 636
BssT1I CCWWGG 1 cut(s) 96
Bst2BI CACGAG 2 cut(s) 112, 636
Bst2UI CCWGG 2 cut(s) 559, 728
Bst4CI ACNGT 2 cut(s) 48, 302
BstACI GRCGYC 2 cut(s) 226, 592
BstAPI GCANNNNNTGC 1 cut(s) 431
BstBAI YACGTR 1 cut(s) 661
BstDEI CTNAG 4 cut(s) 196, 221, 461, 596
BstF5I GGATG 1 cut(s) 707
BstFNI CGCG 1 cut(s) 651
BstHHI GCGC 2 cut(s) 470, 653
BstKTI GATC 4 cut(s) 31, 169, 588, 633
BstMBI GATC 4 cut(s) 28, 166, 585, 630
BstMWI GCNNNNNNNGC 5 cut(s) 197, 200, 431, 455, 650
BstNI CCWGG 2 cut(s) 559, 728
BstSCI CCNGG 2 cut(s) 557, 726
BstSLI GKGCMC 1 cut(s) 427
BstUI CGCG 1 cut(s) 651
BstV1I GCAGC 2 cut(s) 212, 458
BstX2I RGATCY 1 cut(s) 630
BstXI CCANNNNNNTGG 1 cut(s) 178
BstYI RGATCY 1 cut(s) 630
Bsu15I ATCGAT 1 cut(s) 165
BsuRI GGCC 2 cut(s) 194, 557
BsuTUI ATCGAT 1 cut(s) 165
BtrI CACGTC 1 cut(s) 616
BtsCI GGATG 1 cut(s) 707
BtsIMutI CAGTG 3 cut(s) 39, 273, 425
CaiI CAGNNNCTG 1 cut(s) 440
CfoI GCGC 2 cut(s) 470, 653
Cfr13I GGNCC 1 cut(s) 561
ClaI ATCGAT 1 cut(s) 165
CseI GACGC 2 cut(s) 215, 600
CspCI CAANNNNNGTGG 2 cut(s) 6, 41
CviAII CATG 2 cut(s) 230, 341
CviJI RGCY 9 cut(s) 194, 254, 329, 449, 458, 557, 707, 715, 743
CviKI_1 RGCY 9 cut(s) 194, 254, 329, 449, 458, 557, 707, 715, 743
DdeI CTNAG 4 cut(s) 196, 221, 461, 596
DpnI GATC 4 cut(s) 30, 168, 587, 632
DpnII GATC 4 cut(s) 28, 166, 585, 630
DrdI GACNNNNNNGTC 2 cut(s) 515, 759
DseDI GACNNNNNNGTC 2 cut(s) 515, 759
Eco130I CCWWGG 1 cut(s) 96
Eco147I AGGCCT 1 cut(s) 557
Eco47I GGWCC 1 cut(s) 561
Eco57I CTGAAG 1 cut(s) 462
Eco72I CACGTG 1 cut(s) 661
EcoRII CCWGG 2 cut(s) 557, 726
EcoT14I CCWWGG 1 cut(s) 96
ErhI CCWWGG 1 cut(s) 96
FaeI CATG 2 cut(s) 233, 344
FaiI YATR 7 cut(s) 85, 124, 231, 342, 375, 393, 547
FaqI GGGAC 2 cut(s) 709, 747
FatI CATG 2 cut(s) 229, 340
FauI CCCGC 1 cut(s) 726
Fnu4HI GCNGC 6 cut(s) 192, 201, 327, 447, 654, 669
FokI GGATG 1 cut(s) 714
Fsp4HI GCNGC 6 cut(s) 192, 201, 327, 447, 654, 669
FspBI CTAG 2 cut(s) 402, 759
FspI TGCGCA 1 cut(s) 469
GlaI GCGC 2 cut(s) 469, 652
GluI GCNGC 6 cut(s) 192, 201, 327, 447, 654, 669
HaeIII GGCC 2 cut(s) 194, 557
HgaI GACGC 2 cut(s) 215, 600
HhaI GCGC 2 cut(s) 470, 653
Hin1I GRCGYC 2 cut(s) 226, 592
Hin1II CATG 2 cut(s) 233, 344
Hin6I GCGC 2 cut(s) 468, 651
HinP1I GCGC 2 cut(s) 468, 651
HincII GTYRAC 1 cut(s) 298
HindII GTYRAC 1 cut(s) 298
HinfI GANTC 3 cut(s) 370, 503, 509
HpaI GTTAAC 1 cut(s) 298
HphI GGTGA 1 cut(s) 373
Hpy166II GTNNAC 4 cut(s) 39, 298, 407, 425
Hpy188I TCNGA 6 cut(s) 60, 76, 508, 590, 613, 748
Hpy8I GTNNAC 4 cut(s) 39, 298, 407, 425
HpyCH4III ACNGT 2 cut(s) 48, 302
HpyCH4IV ACGT 2 cut(s) 615, 660
HpyCH4V TGCA 8 cut(s) 138, 233, 305, 425, 434, 549, 602, 644
HpyF10VI GCNNNNNNNGC 5 cut(s) 197, 200, 431, 455, 650
HpyF3I CTNAG 4 cut(s) 196, 221, 461, 596
HpySE526I ACGT 2 cut(s) 615, 660
Hsp92I GRCGYC 2 cut(s) 226, 592
Hsp92II CATG 2 cut(s) 233, 344
HspAI GCGC 2 cut(s) 468, 651
KspAI GTTAAC 1 cut(s) 298
Kzo9I GATC 4 cut(s) 28, 166, 585, 630
Lsp1109I GCAGC 2 cut(s) 212, 458
LweI GCATC 2 cut(s) 313, 455
MaeI CTAG 2 cut(s) 402, 759
MaeII ACGT 2 cut(s) 615, 660
MaeIII GTNAC 2 cut(s) 482, 661
MalI GATC 4 cut(s) 30, 168, 587, 632
MbiI CCGCTC 1 cut(s) 656
MboI GATC 4 cut(s) 28, 166, 585, 630
MflI RGATCY 1 cut(s) 630
MhlI GDGCHC 1 cut(s) 427
MluCI AATT 4 cut(s) 18, 209, 306, 316
MlyI GAGTC 1 cut(s) 503
MmeI TCCRAC 1 cut(s) 608
MseI TTAA 5 cut(s) 50, 297, 309, 680, 769
MspR9I CCNGG 2 cut(s) 559, 728
Mva1269I GAATGC 1 cut(s) 436
MvaI CCWGG 2 cut(s) 559, 728
MvnI CGCG 1 cut(s) 651
MwoI GCNNNNNNNGC 5 cut(s) 197, 200, 431, 455, 650
NdeII GATC 4 cut(s) 28, 166, 585, 630
NlaIII CATG 2 cut(s) 233, 344
NlaIV GGNNCC 1 cut(s) 632
NmuCI GTSAC 1 cut(s) 661
NsbI TGCGCA 1 cut(s) 469
PceI AGGCCT 1 cut(s) 557
PctI GAATGC 1 cut(s) 436
PfeI GAWTC 2 cut(s) 370, 503
PkrI GCNGC 6 cut(s) 193, 202, 328, 448, 655, 670
PleI GAGTC 1 cut(s) 503
PmaCI CACGTG 1 cut(s) 661
PmlI CACGTG 1 cut(s) 661
PpsI GAGTC 1 cut(s) 503
Ppu21I YACGTR 1 cut(s) 661
Psp6I CCWGG 2 cut(s) 557, 726
PspCI CACGTG 1 cut(s) 661
PspGI CCWGG 2 cut(s) 557, 726
PspN4I GGNNCC 1 cut(s) 632
PspPI GGNCC 1 cut(s) 561
PstNI CAGNNNCTG 1 cut(s) 440
PsuI RGATCY 1 cut(s) 630
SaqAI TTAA 5 cut(s) 50, 297, 309, 680, 769
SatI GCNGC 6 cut(s) 192, 201, 327, 447, 654, 669
Sau3AI GATC 4 cut(s) 28, 166, 585, 630
Sau96I GGNCC 1 cut(s) 561
SchI GAGTC 1 cut(s) 503
ScrFI CCNGG 2 cut(s) 559, 728
SduI GDGCHC 1 cut(s) 427
SetI ASST 9 cut(s) 15, 137, 315, 451, 484, 541, 618, 663, 721
SfaNI GCATC 2 cut(s) 313, 455
SinI GGWCC 1 cut(s) 561
Sse9I AATT 4 cut(s) 18, 209, 306, 316
SseBI AGGCCT 1 cut(s) 557
SsiI CCGC 7 cut(s) 191, 326, 654, 668, 686, 695, 733
SspMI CTAG 2 cut(s) 402, 759
StuI AGGCCT 1 cut(s) 557
StyD4I CCNGG 2 cut(s) 557, 726
StyI CCWWGG 1 cut(s) 96
TaaI ACNGT 2 cut(s) 48, 302
TaiI ACGT 2 cut(s) 618, 663
TaqI TCGA 3 cut(s) 165, 321, 453
TasI AATT 4 cut(s) 18, 209, 306, 316
TauI GCSGC 4 cut(s) 194, 329, 656, 671
TfiI GAWTC 2 cut(s) 370, 503
Tru1I TTAA 5 cut(s) 50, 297, 309, 680, 769
Tru9I TTAA 5 cut(s) 50, 297, 309, 680, 769
TscAI CASTG 3 cut(s) 46, 280, 432
TseFI GTSAC 1 cut(s) 661
TseI GCWGC 2 cut(s) 200, 446
Tsp45I GTSAC 1 cut(s) 661
TspGWI ACGGA 2 cut(s) 566, 711
TspRI CASTG 3 cut(s) 46, 280, 432
VneI GTGCAC 1 cut(s) 423
VpaK11BI GGWCC 1 cut(s) 561
XapI RAATTY 1 cut(s) 209
XcmI CCANNNNNNNNNTGG 1 cut(s) 178
XspI CTAG 2 cut(s) 402, 759
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.