ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 492 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 62 |
| Acc65I | GGTACC | 1 cut(s) | 94 |
| AccB1I | GGYRCC | 3 cut(s) | 45, 94, 324 |
| AciI | CCGC | 1 cut(s) | 477 |
| AclWI | GGATC | 1 cut(s) | 12 |
| AcsI | RAATTY | 1 cut(s) | 154 |
| AfaI | GTAC | 1 cut(s) | 96 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 42, 465 |
| AgsI | TTSAA | 3 cut(s) | 340, 443, 561 |
| AjnI | CCWGG | 1 cut(s) | 201 |
| AluBI | AGCT | 5 cut(s) | 73, 85, 125, 151, 385 |
| AluI | AGCT | 5 cut(s) | 73, 85, 125, 151, 385 |
| Alw26I | GTCTC | 1 cut(s) | 133 |
| AlwI | GGATC | 1 cut(s) | 12 |
| ApoI | RAATTY | 1 cut(s) | 154 |
| Asp718I | GGTACC | 1 cut(s) | 94 |
| AspS9I | GGNCC | 2 cut(s) | 468, 516 |
| AsuHPI | GGTGA | 2 cut(s) | 407, 438 |
| AvaII | GGWCC | 2 cut(s) | 468, 516 |
| BanI | GGYRCC | 3 cut(s) | 45, 94, 324 |
| BbsI | GAAGAC | 1 cut(s) | 408 |
| BccI | CCATC | 1 cut(s) | 85 |
| BciT130I | CCWGG | 1 cut(s) | 203 |
| BcoDI | GTCTC | 1 cut(s) | 133 |
| Bme1390I | CCNGG | 1 cut(s) | 203 |
| Bme18I | GGWCC | 2 cut(s) | 468, 516 |
| BmgT120I | GGNCC | 2 cut(s) | 468, 516 |
| BmiI | GGNNCC | 3 cut(s) | 47, 96, 326 |
| BmrFI | CCNGG | 1 cut(s) | 203 |
| BmsI | GCATC | 1 cut(s) | 488 |
| BpiI | GAAGAC | 1 cut(s) | 408 |
| BpuEI | CTTGAG | 2 cut(s) | 71, 139 |
| BsaJI | CCNNGG | 1 cut(s) | 245 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 42, 465 |
| BseBI | CCWGG | 1 cut(s) | 203 |
| BseDI | CCNNGG | 1 cut(s) | 245 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 42, 465 |
| BseRI | GAGGAG | 3 cut(s) | 227, 424, 589 |
| BseYI | CCCAGC | 1 cut(s) | 533 |
| BshNI | GGYRCC | 3 cut(s) | 45, 94, 324 |
| BslFI | GGGAC | 1 cut(s) | 273 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 42, 465 |
| BsmAI | GTCTC | 1 cut(s) | 133 |
| BsmFI | GGGAC | 1 cut(s) | 273 |
| Bsp143I | GATC | 2 cut(s) | 4, 316 |
| BspACI | CCGC | 1 cut(s) | 477 |
| BspHI | TCATGA | 1 cut(s) | 7 |
| BspLI | GGNNCC | 3 cut(s) | 47, 96, 326 |
| BspPI | GGATC | 1 cut(s) | 12 |
| BspT107I | GGYRCC | 3 cut(s) | 45, 94, 324 |
| BssECI | CCNNGG | 1 cut(s) | 245 |
| BssMI | GATC | 2 cut(s) | 4, 316 |
| BssT1I | CCWWGG | 1 cut(s) | 245 |
| Bst2UI | CCWGG | 1 cut(s) | 203 |
| Bst4CI | ACNGT | 1 cut(s) | 605 |
| Bst6I | CTCTTC | 1 cut(s) | 604 |
| BstC8I | GCNNGC | 2 cut(s) | 334, 383 |
| BstKTI | GATC | 2 cut(s) | 7, 319 |
| BstMAI | GTCTC | 1 cut(s) | 133 |
| BstMBI | GATC | 2 cut(s) | 4, 316 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 198, 333 |
| BstNI | CCWGG | 1 cut(s) | 203 |
| BstSCI | CCNGG | 1 cut(s) | 201 |
| BstV2I | GAAGAC | 1 cut(s) | 408 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 66 |
| BtsIMutI | CAGTG | 1 cut(s) | 219 |
| Cac8I | GCNNGC | 2 cut(s) | 334, 383 |
| CciI | TCATGA | 1 cut(s) | 7 |
| Cfr13I | GGNCC | 2 cut(s) | 468, 516 |
| Csp6I | GTAC | 1 cut(s) | 95 |
| CviAII | CATG | 4 cut(s) | 8, 329, 428, 530 |
| CviJI | RGCY | 7 cut(s) | 73, 85, 125, 151, 270, 385, 512 |
| CviKI_1 | RGCY | 7 cut(s) | 73, 85, 125, 151, 270, 385, 512 |
| CviQI | GTAC | 1 cut(s) | 95 |
| DpnI | GATC | 2 cut(s) | 6, 318 |
| DpnII | GATC | 2 cut(s) | 4, 316 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 62 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 62 |
| Eam1104I | CTCTTC | 1 cut(s) | 604 |
| EarI | CTCTTC | 1 cut(s) | 604 |
| Eco130I | CCWWGG | 1 cut(s) | 245 |
| Eco32I | GATATC | 1 cut(s) | 22 |
| Eco47I | GGWCC | 2 cut(s) | 468, 516 |
| EcoRII | CCWGG | 1 cut(s) | 201 |
| EcoRV | GATATC | 1 cut(s) | 22 |
| EcoT14I | CCWWGG | 1 cut(s) | 245 |
| ErhI | CCWWGG | 1 cut(s) | 245 |
| FaeI | CATG | 4 cut(s) | 11, 332, 431, 533 |
| FaiI | YATR | 9 cut(s) | 9, 14, 190, 210, 258, 330, 429, 492, 531 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 400, 432 |
| FaqI | GGGAC | 1 cut(s) | 273 |
| FatI | CATG | 4 cut(s) | 7, 328, 427, 529 |
| FauI | CCCGC | 1 cut(s) | 484 |
| GsaI | CCCAGC | 1 cut(s) | 537 |
| Hin1II | CATG | 4 cut(s) | 11, 332, 431, 533 |
| HindIII | AAGCTT | 1 cut(s) | 383 |
| HinfI | GANTC | 5 cut(s) | 38, 181, 215, 443, 557 |
| HphI | GGTGA | 2 cut(s) | 407, 438 |
| Hpy166II | GTNNAC | 3 cut(s) | 219, 253, 505 |
| Hpy188I | TCNGA | 2 cut(s) | 37, 180 |
| Hpy188III | TCNNGA | 5 cut(s) | 8, 67, 88, 118, 554 |
| Hpy8I | GTNNAC | 3 cut(s) | 219, 253, 505 |
| Hpy99I | CGWCG | 2 cut(s) | 168, 609 |
| HpyAV | CCTTC | 1 cut(s) | 465 |
| HpyCH4III | ACNGT | 1 cut(s) | 605 |
| HpyCH4IV | ACGT | 1 cut(s) | 596 |
| HpyCH4V | TGCA | 1 cut(s) | 407 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 198, 333 |
| HpySE526I | ACGT | 1 cut(s) | 596 |
| Hsp92II | CATG | 4 cut(s) | 11, 332, 431, 533 |
| KpnI | GGTACC | 1 cut(s) | 98 |
| Kzo9I | GATC | 2 cut(s) | 4, 316 |
| LpnPI | CCDG | 4 cut(s) | 52, 188, 215, 519 |
| LweI | GCATC | 1 cut(s) | 488 |
| MaeII | ACGT | 1 cut(s) | 596 |
| MalI | GATC | 2 cut(s) | 6, 318 |
| MboI | GATC | 2 cut(s) | 4, 316 |
| MboII | GAAGA | 1 cut(s) | 408 |
| MfeI | CAATTG | 1 cut(s) | 463 |
| MluCI | AATT | 6 cut(s) | 51, 102, 133, 154, 463, 543 |
| MlyI | GAGTC | 2 cut(s) | 32, 224 |
| MmeI | TCCRAC | 1 cut(s) | 60 |
| MnlI | CCTC | 7 cut(s) | 125, 205, 442, 445, 470, 481, 567 |
| MseI | TTAA | 1 cut(s) | 105 |
| MspR9I | CCNGG | 1 cut(s) | 203 |
| MunI | CAATTG | 1 cut(s) | 463 |
| MvaI | CCWGG | 1 cut(s) | 203 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 198, 333 |
| NdeII | GATC | 2 cut(s) | 4, 316 |
| NlaIII | CATG | 4 cut(s) | 11, 332, 431, 533 |
| NlaIV | GGNNCC | 3 cut(s) | 47, 96, 326 |
| PagI | TCATGA | 1 cut(s) | 7 |
| PfeI | GAWTC | 3 cut(s) | 181, 443, 557 |
| PleI | GAGTC | 2 cut(s) | 32, 223 |
| PpsI | GAGTC | 2 cut(s) | 32, 223 |
| PsiI | TTATAA | 1 cut(s) | 492 |
| Psp6I | CCWGG | 1 cut(s) | 201 |
| PspFI | CCCAGC | 1 cut(s) | 533 |
| PspGI | CCWGG | 1 cut(s) | 201 |
| PspN4I | GGNNCC | 3 cut(s) | 47, 96, 326 |
| PspPI | GGNCC | 2 cut(s) | 468, 516 |
| RsaI | GTAC | 1 cut(s) | 96 |
| RsaNI | GTAC | 1 cut(s) | 95 |
| SaqAI | TTAA | 1 cut(s) | 105 |
| Sau3AI | GATC | 2 cut(s) | 4, 316 |
| Sau96I | GGNCC | 2 cut(s) | 468, 516 |
| SchI | GAGTC | 2 cut(s) | 32, 224 |
| ScrFI | CCNGG | 1 cut(s) | 203 |
| SetI | ASST | 7 cut(s) | 75, 87, 127, 153, 387, 457, 599 |
| SfaNI | GCATC | 1 cut(s) | 488 |
| SinI | GGWCC | 2 cut(s) | 468, 516 |
| SmlI | CTYRAG | 2 cut(s) | 86, 118 |
| SmoI | CTYRAG | 2 cut(s) | 86, 118 |
| Sse9I | AATT | 6 cut(s) | 51, 102, 133, 154, 463, 543 |
| SsiI | CCGC | 1 cut(s) | 477 |
| StyD4I | CCNGG | 1 cut(s) | 201 |
| StyI | CCWWGG | 1 cut(s) | 245 |
| TaaI | ACNGT | 1 cut(s) | 605 |
| TaiI | ACGT | 1 cut(s) | 599 |
| TaqI | TCGA | 2 cut(s) | 315, 607 |
| TasI | AATT | 6 cut(s) | 51, 102, 133, 154, 463, 543 |
| TfiI | GAWTC | 3 cut(s) | 181, 443, 557 |
| Tru1I | TTAA | 1 cut(s) | 105 |
| Tru9I | TTAA | 1 cut(s) | 105 |
| TscAI | CASTG | 1 cut(s) | 226 |
| TspRI | CASTG | 1 cut(s) | 226 |
| VpaK11BI | GGWCC | 2 cut(s) | 468, 516 |
| XapI | RAATTY | 1 cut(s) | 154 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 536 |