Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 57 |
| AciI | CCGC | 1 cut(s) | 345 |
| AcoI | YGGCCR | 1 cut(s) | 237 |
| AcuI | CTGAAG | 1 cut(s) | 372 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 117 |
| AgsI | TTSAA | 3 cut(s) | 103, 221, 259 |
| AjnI | CCWGG | 1 cut(s) | 27 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 319, 351 |
| Alw21I | GWGCWC | 1 cut(s) | 110 |
| Alw44I | GTGCAC | 1 cut(s) | 106 |
| AoxI | GGCC | 2 cut(s) | 43, 237 |
| ApaLI | GTGCAC | 1 cut(s) | 106 |
| AspS9I | GGNCC | 2 cut(s) | 317, 342 |
| AvaII | GGWCC | 2 cut(s) | 317, 342 |
| BaeGI | GKGCMC | 1 cut(s) | 110 |
| BalI | TGGCCA | 1 cut(s) | 239 |
| Bbv12I | GWGCWC | 1 cut(s) | 110 |
| BccI | CCATC | 1 cut(s) | 248 |
| BciT130I | CCWGG | 1 cut(s) | 29 |
| BclI | TGATCA | 1 cut(s) | 211 |
| Bme1390I | CCNGG | 1 cut(s) | 29 |
| Bme18I | GGWCC | 2 cut(s) | 317, 342 |
| BmgT120I | GGNCC | 2 cut(s) | 317, 342 |
| BmiI | GGNNCC | 1 cut(s) | 319 |
| BmrFI | CCNGG | 1 cut(s) | 29 |
| BmsI | GCATC | 1 cut(s) | 212 |
| BsaJI | CCNNGG | 1 cut(s) | 17 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 257, 287 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 117 |
| BseBI | CCWGG | 1 cut(s) | 29 |
| BseDI | CCNNGG | 1 cut(s) | 17 |
| BseGI | GGATG | 1 cut(s) | 240 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 117 |
| BseSI | GKGCMC | 1 cut(s) | 110 |
| BshFI | GGCC | 2 cut(s) | 45, 239 |
| BsiHKAI | GWGCWC | 1 cut(s) | 110 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 117 |
| BsnI | GGCC | 2 cut(s) | 45, 239 |
| Bsp1286I | GDGCHC | 1 cut(s) | 110 |
| Bsp143I | GATC | 1 cut(s) | 211 |
| BspACI | CCGC | 1 cut(s) | 345 |
| BspANI | GGCC | 2 cut(s) | 45, 239 |
| BspLI | GGNNCC | 1 cut(s) | 319 |
| BssECI | CCNNGG | 1 cut(s) | 17 |
| BssMI | GATC | 1 cut(s) | 211 |
| Bst2UI | CCWGG | 1 cut(s) | 29 |
| BstDEI | CTNAG | 2 cut(s) | 151, 387 |
| BstDSI | CCRYGG | 1 cut(s) | 17 |
| BstF5I | GGATG | 1 cut(s) | 240 |
| BstKTI | GATC | 1 cut(s) | 214 |
| BstMBI | GATC | 1 cut(s) | 211 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 353 |
| BstNI | CCWGG | 1 cut(s) | 29 |
| BstNSI | RCATGY | 1 cut(s) | 174 |
| BstSCI | CCNGG | 1 cut(s) | 27 |
| BstSLI | GKGCMC | 1 cut(s) | 110 |
| BsuRI | GGCC | 2 cut(s) | 45, 239 |
| BtgI | CCRYGG | 1 cut(s) | 17 |
| BtsCI | GGATG | 1 cut(s) | 240 |
| Cfr13I | GGNCC | 2 cut(s) | 317, 342 |
| CsiI | ACCWGGT | 1 cut(s) | 27 |
| CviAII | CATG | 2 cut(s) | 171, 339 |
| CviJI | RGCY | 4 cut(s) | 45, 121, 239, 356 |
| CviKI_1 | RGCY | 4 cut(s) | 45, 121, 239, 356 |
| DdeI | CTNAG | 2 cut(s) | 151, 387 |
| DpnI | GATC | 1 cut(s) | 213 |
| DpnII | GATC | 1 cut(s) | 211 |
| EaeI | YGGCCR | 1 cut(s) | 237 |
| Eco47I | GGWCC | 2 cut(s) | 317, 342 |
| Eco57I | CTGAAG | 1 cut(s) | 372 |
| EcoO109I | RGGNCCY | 1 cut(s) | 317 |
| EcoRII | CCWGG | 1 cut(s) | 27 |
| FaeI | CATG | 2 cut(s) | 174, 342 |
| FaiI | YATR | 4 cut(s) | 57, 77, 172, 340 |
| FatI | CATG | 2 cut(s) | 170, 338 |
| FbaI | TGATCA | 1 cut(s) | 211 |
| FokI | GGATG | 1 cut(s) | 227 |
| HaeIII | GGCC | 2 cut(s) | 45, 239 |
| Hin1II | CATG | 2 cut(s) | 174, 342 |
| HincII | GTYRAC | 1 cut(s) | 25 |
| HindII | GTYRAC | 1 cut(s) | 25 |
| HinfI | GANTC | 2 cut(s) | 196, 335 |
| Hpy166II | GTNNAC | 2 cut(s) | 25, 108 |
| Hpy188III | TCNNGA | 1 cut(s) | 311 |
| Hpy8I | GTNNAC | 2 cut(s) | 25, 108 |
| HpyAV | CCTTC | 3 cut(s) | 56, 110, 308 |
| HpyCH4IV | ACGT | 1 cut(s) | 216 |
| HpyCH4V | TGCA | 1 cut(s) | 108 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 353 |
| HpyF3I | CTNAG | 2 cut(s) | 151, 387 |
| HpySE526I | ACGT | 1 cut(s) | 216 |
| Hsp92II | CATG | 2 cut(s) | 174, 342 |
| Ksp22I | TGATCA | 1 cut(s) | 211 |
| Kzo9I | GATC | 1 cut(s) | 211 |
| LmnI | GCTCC | 2 cut(s) | 9, 265 |
| LpnPI | CCDG | 5 cut(s) | 14, 41, 160, 185, 363 |
| LweI | GCATC | 1 cut(s) | 212 |
| MabI | ACCWGGT | 1 cut(s) | 27 |
| MaeII | ACGT | 1 cut(s) | 216 |
| MaeIII | GTNAC | 2 cut(s) | 166, 296 |
| MalI | GATC | 1 cut(s) | 213 |
| MboI | GATC | 1 cut(s) | 211 |
| MhlI | GDGCHC | 1 cut(s) | 110 |
| MlsI | TGGCCA | 1 cut(s) | 239 |
| MluCI | AATT | 2 cut(s) | 52, 60 |
| MluNI | TGGCCA | 1 cut(s) | 239 |
| MnlI | CCTC | 2 cut(s) | 17, 331 |
| Mox20I | TGGCCA | 1 cut(s) | 239 |
| MscI | TGGCCA | 1 cut(s) | 239 |
| MseI | TTAA | 2 cut(s) | 51, 366 |
| Msp20I | TGGCCA | 1 cut(s) | 239 |
| MspR9I | CCNGG | 1 cut(s) | 29 |
| MvaI | CCWGG | 1 cut(s) | 29 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 353 |
| NdeII | GATC | 1 cut(s) | 211 |
| NlaIII | CATG | 2 cut(s) | 174, 342 |
| NlaIV | GGNNCC | 1 cut(s) | 319 |
| NmuCI | GTSAC | 1 cut(s) | 296 |
| NspI | RCATGY | 1 cut(s) | 174 |
| PfeI | GAWTC | 2 cut(s) | 196, 335 |
| PpuMI | RGGWCCY | 1 cut(s) | 317 |
| PsiI | TTATAA | 1 cut(s) | 57 |
| Psp5II | RGGWCCY | 1 cut(s) | 317 |
| Psp6I | CCWGG | 1 cut(s) | 27 |
| PspGI | CCWGG | 1 cut(s) | 27 |
| PspN4I | GGNNCC | 1 cut(s) | 319 |
| PspPI | GGNCC | 2 cut(s) | 317, 342 |
| PspPPI | RGGWCCY | 1 cut(s) | 317 |
| SaqAI | TTAA | 2 cut(s) | 51, 366 |
| Sau3AI | GATC | 1 cut(s) | 211 |
| Sau96I | GGNCC | 2 cut(s) | 317, 342 |
| ScrFI | CCNGG | 1 cut(s) | 29 |
| SduI | GDGCHC | 1 cut(s) | 110 |
| SetI | ASST | 4 cut(s) | 30, 86, 219, 352 |
| SexAI | ACCWGGT | 1 cut(s) | 27 |
| SfaNI | GCATC | 1 cut(s) | 212 |
| SinI | GGWCC | 2 cut(s) | 317, 342 |
| Sse9I | AATT | 2 cut(s) | 52, 60 |
| SsiI | CCGC | 1 cut(s) | 345 |
| SspI | AATATT | 1 cut(s) | 376 |
| StyD4I | CCNGG | 1 cut(s) | 27 |
| TaiI | ACGT | 1 cut(s) | 219 |
| TaqI | TCGA | 2 cut(s) | 312, 333 |
| TasI | AATT | 2 cut(s) | 52, 60 |
| TfiI | GAWTC | 2 cut(s) | 196, 335 |
| Tru1I | TTAA | 2 cut(s) | 51, 366 |
| Tru9I | TTAA | 2 cut(s) | 51, 366 |
| TseFI | GTSAC | 1 cut(s) | 296 |
| Tsp45I | GTSAC | 1 cut(s) | 296 |
| TspDTI | ATGAA | 1 cut(s) | 327 |
| VneI | GTGCAC | 1 cut(s) | 106 |
| VpaK11BI | GGWCC | 2 cut(s) | 317, 342 |
| XceI | RCATGY | 1 cut(s) | 174 |