Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 233, 282 |
| AciI | CCGC | 3 cut(s) | 233, 325, 347 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 206 |
| AleI | CACNNNNGTG | 1 cut(s) | 48 |
| AluBI | AGCT | 3 cut(s) | 205, 220, 359 |
| AluI | AGCT | 3 cut(s) | 205, 220, 359 |
| Alw26I | GTCTC | 1 cut(s) | 183 |
| AoxI | GGCC | 1 cut(s) | 17 |
| ApeKI | GCWGC | 2 cut(s) | 269, 344 |
| AspS9I | GGNCC | 1 cut(s) | 245 |
| AvaII | GGWCC | 1 cut(s) | 245 |
| BbsI | GAAGAC | 1 cut(s) | 138 |
| BbvI | GCAGC | 2 cut(s) | 281, 356 |
| BccI | CCATC | 2 cut(s) | 183, 236 |
| BcoDI | GTCTC | 1 cut(s) | 183 |
| BisI | GCNGC | 3 cut(s) | 234, 270, 345 |
| BlpI | GCTNAGC | 1 cut(s) | 315 |
| BlsI | GCNGC | 3 cut(s) | 235, 271, 346 |
| Bme18I | GGWCC | 1 cut(s) | 245 |
| BmgT120I | GGNCC | 1 cut(s) | 245 |
| BmrI | ACTGGG | 1 cut(s) | 300 |
| BmsI | GCATC | 1 cut(s) | 304 |
| BmuI | ACTGGG | 1 cut(s) | 300 |
| BpiI | GAAGAC | 1 cut(s) | 138 |
| BpmI | CTGGAG | 2 cut(s) | 102, 183 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 315 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 56, 86, 163, 193 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 206 |
| Bse1I | ACTGG | 3 cut(s) | 93, 295, 320 |
| Bse3DI | GCAATG | 1 cut(s) | 67 |
| BseGI | GGATG | 1 cut(s) | 247 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 206 |
| BseMI | GCAATG | 1 cut(s) | 67 |
| BseMII | CTCAG | 1 cut(s) | 110 |
| BseNI | ACTGG | 3 cut(s) | 93, 295, 320 |
| BseXI | GCAGC | 2 cut(s) | 281, 356 |
| BseYI | CCCAGC | 1 cut(s) | 205 |
| BsgI | GTGCAG | 1 cut(s) | 168 |
| Bsh1236I | CGCG | 2 cut(s) | 233, 282 |
| BshFI | GGCC | 1 cut(s) | 19 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 206 |
| BsmAI | GTCTC | 1 cut(s) | 183 |
| BsnI | GGCC | 1 cut(s) | 19 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 315 |
| Bsp68I | TCGCGA | 1 cut(s) | 282 |
| BspACI | CCGC | 3 cut(s) | 233, 325, 347 |
| BspANI | GGCC | 1 cut(s) | 19 |
| BspCNI | CTCAG | 1 cut(s) | 109 |
| BspFNI | CGCG | 2 cut(s) | 233, 282 |
| BsrDI | GCAATG | 1 cut(s) | 67 |
| BsrI | ACTGG | 3 cut(s) | 93, 295, 320 |
| Bst4CI | ACNGT | 1 cut(s) | 154 |
| Bst6I | CTCTTC | 1 cut(s) | 305 |
| BstC8I | GCNNGC | 2 cut(s) | 55, 327 |
| BstDEI | CTNAG | 2 cut(s) | 96, 315 |
| BstF5I | GGATG | 1 cut(s) | 247 |
| BstFNI | CGCG | 2 cut(s) | 233, 282 |
| BstMAI | GTCTC | 1 cut(s) | 183 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 101, 110, 311, 335, 344 |
| BstUI | CGCG | 2 cut(s) | 233, 282 |
| BstV1I | GCAGC | 2 cut(s) | 281, 356 |
| BstV2I | GAAGAC | 1 cut(s) | 138 |
| BsuRI | GGCC | 1 cut(s) | 19 |
| BtsCI | GGATG | 1 cut(s) | 247 |
| BtsIMutI | CAGTG | 1 cut(s) | 327 |
| BtuMI | TCGCGA | 1 cut(s) | 282 |
| Cac8I | GCNNGC | 2 cut(s) | 55, 327 |
| Cfr13I | GGNCC | 1 cut(s) | 245 |
| CseI | GACGC | 1 cut(s) | 46 |
| CviAII | CATG | 1 cut(s) | 226 |
| CviJI | RGCY | 8 cut(s) | 19, 104, 205, 220, 236, 272, 319, 359 |
| CviKI_1 | RGCY | 8 cut(s) | 19, 104, 205, 220, 236, 272, 319, 359 |
| DdeI | CTNAG | 2 cut(s) | 96, 315 |
| Eam1104I | CTCTTC | 1 cut(s) | 305 |
| EarI | CTCTTC | 1 cut(s) | 305 |
| Eco47I | GGWCC | 1 cut(s) | 245 |
| FaeI | CATG | 1 cut(s) | 229 |
| FaiI | YATR | 4 cut(s) | 14, 16, 25, 227 |
| FatI | CATG | 1 cut(s) | 225 |
| FauI | CCCGC | 1 cut(s) | 318 |
| FauNDI | CATATG | 1 cut(s) | 14 |
| Fnu4HI | GCNGC | 3 cut(s) | 234, 270, 345 |
| FokI | GGATG | 1 cut(s) | 254 |
| Fsp4HI | GCNGC | 3 cut(s) | 234, 270, 345 |
| GluI | GCNGC | 3 cut(s) | 234, 270, 345 |
| GsaI | CCCAGC | 1 cut(s) | 209 |
| GsuI | CTGGAG | 2 cut(s) | 102, 183 |
| HaeIII | GGCC | 1 cut(s) | 19 |
| HgaI | GACGC | 1 cut(s) | 46 |
| Hin1II | CATG | 1 cut(s) | 229 |
| HinfI | GANTC | 2 cut(s) | 193, 284 |
| Hpy188I | TCNGA | 1 cut(s) | 99 |
| Hpy188III | TCNNGA | 3 cut(s) | 119, 200, 281 |
| HpyAV | CCTTC | 2 cut(s) | 94, 137 |
| HpyCH4III | ACNGT | 1 cut(s) | 154 |
| HpyCH4V | TGCA | 4 cut(s) | 160, 185, 269, 344 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 101, 110, 311, 335, 344 |
| HpyF3I | CTNAG | 2 cut(s) | 96, 315 |
| Hsp92II | CATG | 1 cut(s) | 229 |
| LmnI | GCTCC | 1 cut(s) | 77 |
| LpnPI | CCDG | 8 cut(s) | 74, 132, 191, 195, 213, 276, 291, 333 |
| Lsp1109I | GCAGC | 2 cut(s) | 281, 356 |
| LweI | GCATC | 1 cut(s) | 304 |
| MboII | GAAGA | 4 cut(s) | 125, 138, 159, 292 |
| MfeI | CAATTG | 1 cut(s) | 339 |
| MluCI | AATT | 2 cut(s) | 330, 339 |
| MlyI | GAGTC | 1 cut(s) | 278 |
| MnlI | CCTC | 3 cut(s) | 148, 207, 254 |
| MslI | CAYNNNNRTG | 1 cut(s) | 48 |
| MspA1I | CMGCKG | 1 cut(s) | 347 |
| MunI | CAATTG | 1 cut(s) | 339 |
| MvnI | CGCG | 2 cut(s) | 233, 282 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 101, 110, 311, 335, 344 |
| NdeI | CATATG | 1 cut(s) | 14 |
| NlaIII | CATG | 1 cut(s) | 229 |
| NruI | TCGCGA | 1 cut(s) | 282 |
| OliI | CACNNNNGTG | 1 cut(s) | 48 |
| PfeI | GAWTC | 1 cut(s) | 193 |
| PkrI | GCNGC | 3 cut(s) | 235, 271, 346 |
| PleI | GAGTC | 1 cut(s) | 278 |
| PpsI | GAGTC | 1 cut(s) | 278 |
| PspFI | CCCAGC | 1 cut(s) | 205 |
| PspPI | GGNCC | 1 cut(s) | 245 |
| RruI | TCGCGA | 1 cut(s) | 282 |
| RseI | CAYNNNNRTG | 1 cut(s) | 48 |
| SatI | GCNGC | 3 cut(s) | 234, 270, 345 |
| Sau96I | GGNCC | 1 cut(s) | 245 |
| SchI | GAGTC | 1 cut(s) | 278 |
| SetI | ASST | 4 cut(s) | 207, 222, 265, 361 |
| SfaNI | GCATC | 1 cut(s) | 304 |
| SinI | GGWCC | 1 cut(s) | 245 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 48 |
| Sse9I | AATT | 2 cut(s) | 330, 339 |
| SsiI | CCGC | 3 cut(s) | 233, 325, 347 |
| TaaI | ACNGT | 1 cut(s) | 154 |
| TaqI | TCGA | 1 cut(s) | 140 |
| TasI | AATT | 2 cut(s) | 330, 339 |
| TauI | GCSGC | 1 cut(s) | 236 |
| TfiI | GAWTC | 1 cut(s) | 193 |
| TscAI | CASTG | 1 cut(s) | 327 |
| TseI | GCWGC | 2 cut(s) | 269, 344 |
| TspDTI | ATGAA | 2 cut(s) | 119, 242 |
| TspRI | CASTG | 1 cut(s) | 327 |
| VpaK11BI | GGWCC | 1 cut(s) | 245 |