FvH4_2g04612

Ubiquitin-binding WIYLD domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000093
Physical Location & Seq
Forward (+)
3536271 .. 3537500
1230 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g04612.t1

Sequence Viewer

Length: 1089 bp
ATGCTAGCTCTCATCTTCTGCCCTTTGTGGCCTTCACTTGTTGGGAAATTTGGAAAGCGAGGTGCAAATTTGTTCCAGCATGCTCAACCTGATCCTCTTCTAGTCGCGTCTCATGCTTCCACTGCCTTGGAAGAGTTCCTGCACGCAAAAAGCACTGTAAGTCCTCTTTCATGCTCTCTCGATACCCCCACTTCCATCACTCAAATCACAATTTCTCTCCTCAACACCCCCATAAGCCCTCCAGTTGCAATTTCTAGCCAAATCAACACTCCTCCCCATACACCTAACCAGTTATACACCATCCCTACGCATAACCGCTTCTCTCTCATCAACCACTCTAATGATCCAGTCTTGGAGACCCCCATCCCAAACCGCATTCCCACATCTGCCACACATCCACACCCACCTCTCTTTCACCAGAGTCCATTACAACATCACTTTTTGGACCGATCCTCAGTTCCCATAAGAACCCCTATCTCCATCACAAATCCCATGAGAAGTTCTTCTGCCACCCCCATCATCCACAATCACTACAATGGGGACCTCAACCATCATCATATTCCATCTCCAACCCCATCACCCAATTGGATTTCCCCACCCACGGCCTATATCAAATTAAATTGTGATGGTGCATGGGATAAGCTTACCAATCTCATGGGAGTCGGAGTAGTGGCGCGAGACTCAGAGGGTCGTCTCGTTGGTGGCTCCTCCAAGTTTGGTTTACCAGCATTTGCACTTGAGGCGGAGGCCATGGTGGCATCATCAGCGATGGAGCTCGCAAAAAAACTCCGGTTCCAATCAGTCATCTTCGAATCAGATTCACAAAACTTGGTTGATGCGATTAATGGTTCGAAGACTTCACCGCATTGGAGCCTCATTCCCACAATCAATCGGATCCGCCATGACTCTTGTTTCTTCAGAACCTTCTCATGGAGGTGGACTCCCCGTCAAGCGAACTCGGCAGCCGATCATGTTGCCTCACTATCATTGAGGAAGATGTGCCCTGAATCTTGGGTTATTCGACCCCCATCTTCCTTGGTCCATATTCTATCGAGGGATGGTCTTCCCTGTCCTCCGGCAGCATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WIYLD

Protein Analysis

363

Amino Acids

39.63

Weight (kDa)

8.97

Isoelectric Point (pI)

50.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_3 PF13456 207 - 327 1.3e-19 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000093)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G09490
fragaria_vesca FvH4_1g23791 FvH4_2g01641 FvH4_2g04612 FvH4_2g06831 FvH4_2g07841 FvH4_2g13581 FvH4_2g27220 FvH4_2g30621 FvH4_2g34753 FvH4_3g10392 FvH4_3g24291 FvH4_3g25030 FvH4_3g29361 FvH4_3g31372 FvH4_3g32402 FvH4_3g43651 FvH4_4g03830 FvH4_4g05481 FvH4_4g20431 FvH4_4g21421 FvH4_4g25931 FvH4_5g08801 FvH4_5g21021 FvH4_5g26254 FvH4_5g30931 FvH4_5g31281 FvH4_5g33581 FvH4_5g35622 FvH4_6g02100 FvH4_6g07963 FvH4_6g11620 FvH4_6g16031 FvH4_6g19041 FvH4_6g24211 FvH4_6g24271 FvH4_6g30670 FvH4_6g49540 FvH4_7g25914
malus_domestica MD03G1245200.v1.1 MD04G1168000.v1.1 MD09G1242600.v1.1 MD15G1334000.v1.1 MD17G1165700.v1.1
prunus_persica Prupe.1G073500_v2.0.a1 Prupe.1G283700_v2.0.a1 Prupe.1G524100_v2.0.a1 Prupe.2G022700_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G044300_v2.0.a1 Prupe.2G048800_v2.0.a1 Prupe.2G092000_v2.0.a1 Prupe.2G216500_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.3G103400_v2.0.a1 Prupe.3G143300_v2.0.a1 Prupe.3G190000_v2.0.a1 Prupe.3G219800_v2.0.a1 Prupe.4G177800_v2.0.a1 Prupe.4G261300_v2.0.a1 Prupe.5G044600_v2.0.a1 Prupe.5G067400_v2.0.a1 Prupe.7G083900_v2.0.a1 Prupe.7G120900_v2.0.a1 Prupe.8G032200_v2.0.a1 Prupe.8G036100_v2.0.a1 Prupe.8G042700_v2.0.a1
pyrus_communis pycom01g21710 pycom02g19770 pycom03g05120 pycom05g01370 pycom05g08780 pycom05g10120 pycom07g01370 pycom07g05930 pycom08g15760 pycom08g18090 pycom08g21060 pycom09g03880 pycom10g03870 pycom13g22240 pycom16g05120 pycom16g17170 pycom17g12180 pycom17g16290 pycom17g21230 pycom17g24990 pycom215g00100
rosa_chinensis RchiOBHm_Chr1g0323031 RchiOBHm_Chr1g0324391 RchiOBHm_Chr1g0326401 RchiOBHm_Chr1g0327811 RchiOBHm_Chr1g0332521 RchiOBHm_Chr1g0336501 RchiOBHm_Chr1g0346021 RchiOBHm_Chr1g0347191 RchiOBHm_Chr1g0367181 RchiOBHm_Chr2g0089441 RchiOBHm_Chr2g0115441 RchiOBHm_Chr3g0490691 RchiOBHm_Chr4g0395251 RchiOBHm_Chr4g0398081 RchiOBHm_Chr4g0409451 RchiOBHm_Chr4g0413041 RchiOBHm_Chr4g0415471 RchiOBHm_Chr4g0420961 RchiOBHm_Chr5g0040301 RchiOBHm_Chr5g0070651 RchiOBHm_Chr6g0263011 RchiOBHm_Chr6g0270721 RchiOBHm_Chr6g0277111 RchiOBHm_Chr7g0179771 RchiOBHm_Chr7g0223051 RchiOBHm_Chr7g0225031 RchiOBHm_Chr7g0225091
rosa_laevigata RLG00000001668 RLG00000001672 RLG00000001676 RLG00000007762 RLG00000008994 RLG00000011117 RLG00000013729 RLG00000013839 RLG00000014759 RLG00000016638 RLG00000018535 RLG00000018614 RLG00000018646 RLG00000020679 RLG00000023337 RLG00000029348 RLG00000035891 RLG00000035912
rosa_multiflora Rmu_co8152500.1_g000001 Rmu_co8203314.1_g000001 Rmu_co8383183.1_g000001 Rmu_sc0000293.1_g000033 Rmu_sc0000367.1_g000226 Rmu_sc0000512.1_g000023 Rmu_sc0000594.1_g000059 Rmu_sc0000654.1_g000022 Rmu_sc0000654.1_g000047 Rmu_sc0000706.1_g000037 Rmu_sc0001348.1_g000008 Rmu_sc0001385.1_g000024 Rmu_sc0001405.1_g000002 Rmu_sc0001521.1_g000048 Rmu_sc0001932.1_g000008 Rmu_sc0001932.1_g000009 Rmu_sc0002535.1_g000011 Rmu_sc0002908.1_g000019 Rmu_sc0003709.1_g000004 Rmu_sc0003882.1_g000054 Rmu_sc0004035.1_g000007 Rmu_sc0004041.1_g000007 Rmu_sc0004288.1_g000011 Rmu_sc0004569.1_g000004 Rmu_sc0004677.1_g000016 Rmu_sc0004834.1_g000010 Rmu_sc0005193.1_g000008 Rmu_sc0005354.1_g000009 Rmu_sc0006514.1_g000021 Rmu_sc0006691.1_g000001 Rmu_sc0006888.1_g000021 Rmu_sc0006889.1_g000013 Rmu_sc0008096.1_g000017 Rmu_sc0008378.1_g000003 Rmu_sc0009127.1_g000005 Rmu_sc0009191.1_g000016 Rmu_sc0009687.1_g000018 Rmu_sc0009709.1_g000005 Rmu_sc0009880.1_g000015 Rmu_sc0011710.1_g000001 Rmu_sc0012615.1_g000004 Rmu_sc0016091.1_g000002 Rmu_sc0022339.1_g000006 Rmu_sc0026537.1_g000002 Rmu_sc0027689.1_g000002 Rmu_sc0036222.1_g000001 Rmu_sc0040890.1_g000001 Rmu_ssc0000148.1_g000006 Rmu_ssc0000151.1_g000017 Rmu_ssc0000404.1_g000018 Rmu_ssc0000449.1_g000009
rosa_roxburghii Rroxscaffold_1G00017760 Rroxscaffold_1G00059150 Rroxscaffold_2G00142560 Rroxscaffold_3G00220440 Rroxscaffold_3G00231700 Rroxscaffold_3G00232400 Rroxscaffold_3G00274510 Rroxscaffold_4G00288790 Rroxscaffold_4G00305680 Rroxscaffold_4G00314880 Rroxscaffold_4G00314900 Rroxscaffold_5G00334590 Rroxscaffold_6G00394110 Rroxscaffold_6G00415860 Rroxscaffold_7G00168240 Rroxscaffold_7G00204400 Rroxscaffold_7G00207840
rosa_rugosa Rorug01G0034900 Rorug02G0079500 Rorug02G0229000 Rorug02G0229100 Rorug02G0291400 Rorug02G0298800 Rorug03G0046400 Rorug03G0064700 Rorug03G0077300 Rorug03G0199000 Rorug03G0200400 Rorug04G0205200 Rorug05G0025400 Rorug05G0127400 Rorug05G0192100 Rorug05G0453400 Rorug05G0538300 Rorug06G0035200 Rorug06G0241000 Rorug06G0268300 Rorug07G0120300 Rorug07G0145000 Rorug07G0209100 Rorug07G0240500 Rorug07G0271700
rosa_samantha Rh1AG179100 Rh1BG106900 Rh1BG163400 Rh1BG163500 Rh1BG323500 Rh2CG447900 Rh2DG503700 Rh3AG293600 Rh3CG229100 Rh3DG221500 Rh4AG106000 Rh4BG267700 Rh4CG062500 Rh4CG090100 Rh4CG114800 Rh5AG038400 Rh5BG395400 Rh5CG441700 Rh5CG572000 Rh6AG222400 Rh6AG264500 Rh6BG137400 Rh6BG225700 Rh6CG144300 Rh6DG087600 Rh6DG096000 Rh6DG362400 Rh6DG390200 Rh7AG207500 Rh7AG324700 Rh7AG388800 Rh7AG437100 Rh7BG019000 Rh7BG374600 Rh7CG028700 Rh7CG341500 Rh7CG408000 Rh7CG408300 Rh7DG354600
rosa_wichuraiana Rw0G009630 Rw0G012170 Rw4G022700 Rw5G028420 Rw5G029490 Rw6G007220 Rw6G007410 Rw6G017880 Rw7G012440 Rw7G021830 Rw7G027490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 107, 676
AciI CCGC 5 cut(s) 316, 373, 743, 863, 898
AclWI GGATC 5 cut(s) 86, 338, 444, 889, 902
AcsI RAATTY 2 cut(s) 47, 67
AcuI CTGAAG 1 cut(s) 901
AfiI CCNNNNNNNGG 2 cut(s) 601, 930
AhdI GACNNNNNGTC 1 cut(s) 945
AluBI AGCT 3 cut(s) 8, 643, 775
AluI AGCT 3 cut(s) 8, 643, 775
Alw21I GWGCWC 1 cut(s) 777
Alw26I GTCTC 4 cut(s) 114, 350, 672, 698
AlwI GGATC 5 cut(s) 86, 338, 444, 889, 902
AoxI GGCC 3 cut(s) 29, 603, 747
ApeKI GCWGC 2 cut(s) 962, 1079
ApoI RAATTY 2 cut(s) 47, 67
AseI ATTAAT 1 cut(s) 843
Asp700I GAANNNNTTC 1 cut(s) 502
AspLEI GCGC 1 cut(s) 676
AspS9I GGNCC 3 cut(s) 445, 541, 1039
AsuHPI GGTGA 3 cut(s) 407, 570, 852
AsuII TTCGAA 2 cut(s) 810, 851
AsuNHI GCTAGC 1 cut(s) 4
AvaII GGWCC 3 cut(s) 445, 541, 1039
BaeGI GKGCMC 1 cut(s) 1004
BamHI GGATCC 1 cut(s) 894
BanII GRGCYC 1 cut(s) 777
BbsI GAAGAC 2 cut(s) 860, 1055
Bbv12I GWGCWC 1 cut(s) 777
BbvI GCAGC 1 cut(s) 974
BceAI ACGGC 1 cut(s) 618
BcgI CGANNNNNNTGC 2 cut(s) 956, 990
BcoDI GTCTC 4 cut(s) 114, 350, 672, 698
BfaI CTAG 3 cut(s) 5, 101, 255
BglI GCCNNNNNGGC 1 cut(s) 755
BisI GCNGC 2 cut(s) 963, 1080
BlsI GCNGC 2 cut(s) 964, 1081
Bme18I GGWCC 3 cut(s) 445, 541, 1039
BmeRI GACNNNNNGTC 1 cut(s) 945
BmgT120I GGNCC 3 cut(s) 445, 541, 1039
BmiI GGNNCC 5 cut(s) 542, 706, 794, 872, 896
BmsI GCATC 2 cut(s) 767, 826
BmtI GCTAGC 1 cut(s) 8
BpiI GAAGAC 2 cut(s) 860, 1055
BplI GAGNNNNNCTC 2 cut(s) 925, 957
BpmI CTGGAG 1 cut(s) 225
Bpu14I TTCGAA 2 cut(s) 810, 851
BpuEI CTTGAG 1 cut(s) 758
BsaI GGTCTC 1 cut(s) 350
BsaJI CCNNGG 4 cut(s) 126, 600, 750, 1035
BsaWI WCCGGW 1 cut(s) 789
BsaXI ACNNNNNCTCC 2 cut(s) 651, 681
Bsc4I CCNNNNNNNGG 2 cut(s) 601, 930
Bse1I ACTGG 3 cut(s) 242, 289, 347
BseDI CCNNGG 4 cut(s) 126, 600, 750, 1035
BseGI GGATG 5 cut(s) 300, 363, 394, 519, 1063
BseLI CCNNNNNNNGG 2 cut(s) 601, 930
BseMII CTCAG 2 cut(s) 468, 696
BseNI ACTGG 3 cut(s) 242, 289, 347
BseRI GAGGAG 3 cut(s) 209, 261, 697
BseSI GKGCMC 1 cut(s) 1004
BseXI GCAGC 1 cut(s) 974
BsgI GTGCAG 1 cut(s) 125
Bsh1236I CGCG 2 cut(s) 107, 676
BshFI GGCC 3 cut(s) 31, 605, 749
BsiHKAI GWGCWC 1 cut(s) 777
BsiSI CCGG 2 cut(s) 790, 1076
BslFI GGGAC 1 cut(s) 554
BslI CCNNNNNNNGG 2 cut(s) 601, 930
BsmAI GTCTC 4 cut(s) 114, 350, 672, 698
BsmBI CGTCTC 2 cut(s) 114, 698
BsmFI GGGAC 1 cut(s) 554
BsmI GAATGC 1 cut(s) 375
BsnI GGCC 3 cut(s) 31, 605, 749
Bso31I GGTCTC 1 cut(s) 350
Bsp119I TTCGAA 2 cut(s) 810, 851
Bsp1286I GDGCHC 2 cut(s) 777, 1004
Bsp143I GATC 5 cut(s) 91, 343, 449, 894, 967
Bsp19I CCATGG 1 cut(s) 750
BspACI CCGC 5 cut(s) 316, 373, 743, 863, 898
BspANI GGCC 3 cut(s) 31, 605, 749
BspCNI CTCAG 2 cut(s) 467, 695
BspFNI CGCG 2 cut(s) 107, 676
BspHI TCATGA 1 cut(s) 1085
BspLI GGNNCC 5 cut(s) 542, 706, 794, 872, 896
BspOI GCTAGC 1 cut(s) 8
BspPI GGATC 5 cut(s) 86, 338, 444, 889, 902
BspT104I TTCGAA 2 cut(s) 810, 851
BspTNI GGTCTC 1 cut(s) 350
BsrI ACTGG 3 cut(s) 242, 289, 347
BssECI CCNNGG 4 cut(s) 126, 600, 750, 1035
BssMI GATC 5 cut(s) 91, 343, 449, 894, 967
BssT1I CCWWGG 3 cut(s) 126, 750, 1035
Bst4CI ACNGT 1 cut(s) 157
Bst6I CTCTTC 2 cut(s) 102, 126
BstBI TTCGAA 2 cut(s) 810, 851
BstC8I GCNNGC 4 cut(s) 6, 81, 144, 777
BstDEI CTNAG 2 cut(s) 454, 682
BstDSI CCRYGG 2 cut(s) 600, 750
BstF5I GGATG 5 cut(s) 300, 363, 394, 519, 1063
BstFNI CGCG 2 cut(s) 107, 676
BstHHI GCGC 1 cut(s) 676
BstKTI GATC 5 cut(s) 94, 346, 452, 897, 970
BstMAI GTCTC 4 cut(s) 114, 350, 672, 698
BstMBI GATC 5 cut(s) 91, 343, 449, 894, 967
BstMWI GCNNNNNNNGC 6 cut(s) 113, 122, 740, 755, 764, 959
BstNSI RCATGY 1 cut(s) 83
BstSLI GKGCMC 1 cut(s) 1004
BstUI CGCG 2 cut(s) 107, 676
BstV1I GCAGC 1 cut(s) 974
BstV2I GAAGAC 2 cut(s) 860, 1055
BstX2I RGATCY 1 cut(s) 894
BstXI CCANNNNNNTGG 2 cut(s) 127, 655
BstYI RGATCY 1 cut(s) 894
BsuRI GGCC 3 cut(s) 31, 605, 749
BtgI CCRYGG 2 cut(s) 600, 750
BtgZI GCGATG 1 cut(s) 782
BtsCI GGATG 5 cut(s) 300, 363, 394, 519, 1063
BtsI GCAGTG 1 cut(s) 120
BtsIMutI CAGTG 2 cut(s) 120, 153
Cac8I GCNNGC 4 cut(s) 6, 81, 144, 777
CciI TCATGA 1 cut(s) 1085
CfoI GCGC 1 cut(s) 676
Cfr13I GGNCC 3 cut(s) 445, 541, 1039
CseI GACGC 1 cut(s) 96
DdeI CTNAG 2 cut(s) 454, 682
DpnI GATC 5 cut(s) 93, 345, 451, 896, 969
DpnII GATC 5 cut(s) 91, 343, 449, 894, 967
DriI GACNNNNNGTC 1 cut(s) 945
Eam1104I CTCTTC 2 cut(s) 102, 126
Eam1105I GACNNNNNGTC 1 cut(s) 945
EarI CTCTTC 2 cut(s) 102, 126
EciI GGCGGA 2 cut(s) 758, 887
Ecl136II GAGCTC 1 cut(s) 775
Eco130I CCWWGG 3 cut(s) 126, 750, 1035
Eco24I GRGCYC 1 cut(s) 777
Eco31I GGTCTC 1 cut(s) 350
Eco47I GGWCC 3 cut(s) 445, 541, 1039
Eco53kI GAGCTC 1 cut(s) 775
Eco57I CTGAAG 1 cut(s) 901
EcoICRI GAGCTC 1 cut(s) 775
EcoO109I RGGNCCY 1 cut(s) 541
EcoT14I CCWWGG 3 cut(s) 126, 750, 1035
EcoT38I GRGCYC 1 cut(s) 777
ErhI CCWWGG 3 cut(s) 126, 750, 1035
Esp3I CGTCTC 2 cut(s) 114, 698
FaqI GGGAC 1 cut(s) 554
Fnu4HI GCNGC 2 cut(s) 963, 1080
FokI GGATG 5 cut(s) 287, 350, 381, 506, 1070
FriOI GRGCYC 1 cut(s) 777
Fsp4HI GCNGC 2 cut(s) 963, 1080
FspBI CTAG 3 cut(s) 5, 101, 255
GlaI GCGC 1 cut(s) 675
GluI GCNGC 2 cut(s) 963, 1080
GsuI CTGGAG 1 cut(s) 225
HaeIII GGCC 3 cut(s) 31, 605, 749
HapII CCGG 2 cut(s) 790, 1076
HgaI GACGC 1 cut(s) 96
HhaI GCGC 1 cut(s) 676
Hin6I GCGC 1 cut(s) 674
HinP1I GCGC 1 cut(s) 674
HindIII AAGCTT 1 cut(s) 641
HinfI GANTC 8 cut(s) 421, 660, 680, 812, 818, 905, 940, 1007
HpaII CCGG 2 cut(s) 790, 1076
HphI GGTGA 3 cut(s) 407, 570, 852
Hpy166II GTNNAC 2 cut(s) 722, 939
Hpy188I TCNGA 5 cut(s) 665, 685, 817, 894, 920
Hpy188III TCNNGA 2 cut(s) 179, 1086
Hpy8I GTNNAC 2 cut(s) 722, 939
HpyAV CCTTC 2 cut(s) 42, 934
HpyCH4III ACNGT 1 cut(s) 157
HpyCH4V TGCA 5 cut(s) 65, 142, 248, 632, 734
HpyF10VI GCNNNNNNNGC 6 cut(s) 113, 122, 740, 755, 764, 959
HpyF3I CTNAG 2 cut(s) 454, 682
HspAI GCGC 1 cut(s) 674
Kzo9I GATC 5 cut(s) 91, 343, 449, 894, 967
LmnI GCTCC 3 cut(s) 710, 772, 870
Lsp1109I GCAGC 1 cut(s) 974
LweI GCATC 2 cut(s) 767, 826
MaeI CTAG 3 cut(s) 5, 101, 255
MalI GATC 5 cut(s) 93, 345, 451, 896, 969
MboI GATC 5 cut(s) 91, 343, 449, 894, 967
MfeI CAATTG 1 cut(s) 583
MflI RGATCY 1 cut(s) 894
MhlI GDGCHC 2 cut(s) 777, 1004
MluCI AATT 7 cut(s) 47, 67, 210, 249, 583, 614, 619
MlyI GAGTC 5 cut(s) 430, 669, 674, 899, 934
MmeI TCCRAC 2 cut(s) 593, 643
MroXI GAANNNNTTC 1 cut(s) 502
MseI TTAA 2 cut(s) 617, 843
MslI CAYNNNNRTG 3 cut(s) 339, 534, 934
MspI CCGG 2 cut(s) 790, 1076
MunI CAATTG 1 cut(s) 583
Mva1269I GAATGC 1 cut(s) 375
MvnI CGCG 2 cut(s) 107, 676
MwoI GCNNNNNNNGC 6 cut(s) 113, 122, 740, 755, 764, 959
NcoI CCATGG 1 cut(s) 750
NdeII GATC 5 cut(s) 91, 343, 449, 894, 967
NheI GCTAGC 1 cut(s) 4
NlaIV GGNNCC 5 cut(s) 542, 706, 794, 872, 896
NmeAIII GCCGAG 1 cut(s) 938
NspI RCATGY 1 cut(s) 83
NspV TTCGAA 2 cut(s) 810, 851
PaeI GCATGC 1 cut(s) 83
PagI TCATGA 1 cut(s) 1085
PctI GAATGC 1 cut(s) 375
PdmI GAANNNNTTC 1 cut(s) 502
PfeI GAWTC 3 cut(s) 812, 818, 1007
PkrI GCNGC 2 cut(s) 964, 1081
PleI GAGTC 5 cut(s) 429, 668, 674, 899, 934
PpsI GAGTC 5 cut(s) 429, 668, 674, 899, 934
PpuMI RGGWCCY 1 cut(s) 541
PshBI ATTAAT 1 cut(s) 843
Psp124BI GAGCTC 1 cut(s) 777
Psp5II RGGWCCY 1 cut(s) 541
PspN4I GGNNCC 5 cut(s) 542, 706, 794, 872, 896
PspPI GGNCC 3 cut(s) 445, 541, 1039
PspPPI RGGWCCY 1 cut(s) 541
PsuI RGATCY 1 cut(s) 894
RseI CAYNNNNRTG 3 cut(s) 339, 534, 934
SacI GAGCTC 1 cut(s) 777
SaqAI TTAA 2 cut(s) 617, 843
SatI GCNGC 2 cut(s) 963, 1080
Sau3AI GATC 5 cut(s) 91, 343, 449, 894, 967
Sau96I GGNCC 3 cut(s) 445, 541, 1039
SchI GAGTC 5 cut(s) 430, 669, 674, 899, 934
SduI GDGCHC 2 cut(s) 777, 1004
SfaNI GCATC 2 cut(s) 767, 826
SfuI TTCGAA 2 cut(s) 810, 851
SinI GGWCC 3 cut(s) 445, 541, 1039
SmiMI CAYNNNNRTG 3 cut(s) 339, 534, 934
SmlI CTYRAG 1 cut(s) 737
SmoI CTYRAG 1 cut(s) 737
SphI GCATGC 1 cut(s) 83
Sse9I AATT 7 cut(s) 47, 67, 210, 249, 583, 614, 619
SsiI CCGC 5 cut(s) 316, 373, 743, 863, 898
SspMI CTAG 3 cut(s) 5, 101, 255
SstI GAGCTC 1 cut(s) 777
StyI CCWWGG 3 cut(s) 126, 750, 1035
TaaI ACNGT 1 cut(s) 157
TaqI TCGA 5 cut(s) 180, 810, 851, 1021, 1052
TaqII GACCGA 1 cut(s) 462
TasI AATT 7 cut(s) 47, 67, 210, 249, 583, 614, 619
TfiI GAWTC 3 cut(s) 812, 818, 1007
Tru1I TTAA 2 cut(s) 617, 843
Tru9I TTAA 2 cut(s) 617, 843
TscAI CASTG 2 cut(s) 127, 160
TseI GCWGC 2 cut(s) 962, 1079
TspDTI ATGAA 1 cut(s) 159
TspRI CASTG 2 cut(s) 127, 160
VpaK11BI GGWCC 3 cut(s) 445, 541, 1039
VspI ATTAAT 1 cut(s) 843
XapI RAATTY 2 cut(s) 47, 67
XceI RCATGY 1 cut(s) 83
XcmI CCANNNNNNNNNTGG 1 cut(s) 582
XmnI GAANNNNTTC 1 cut(s) 502
XspI CTAG 3 cut(s) 5, 101, 255
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.