RchiOBHm_Chr4g0398081

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000093
Physical Location & Seq
Reverse (-)
14468685 .. 14470130
1446 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37028

Sequence Viewer

Length: 864 bp
ATGCTCTTCTTATGTAAATGGGTAGAGAGAGTATGGTTTGCAAGCACCATCAATTACAAGCCAAACATTCAGACTTTAACAAGTTTTGATAGATGGATTACCGGTTTGAAGTACAGCAATGCTTTCACAACTGAGCAACTGAATTGGATTCTTACGCAGATGGCCTTTTTATGTTGGCATATATGGAAAGCTAGATGCGGAGCACTCTACGAACATAAGGGTGAGGCCTTGCCTGATCCGGGTCTTGTTGCTTCTTCTGCTTCTGCTGCTGCTTTGGAGTTCCTGCATGTCAATAAAAAAGGCAATCAGAATCATGATGAGACCTATATGACGGCACGAATCCGCGATCAAAAGTGGGTACCTCCACAATCGGACTTCATCAAATTGAATGTTAACGGCTCATGGATCAAGAGCAGTGGTGAAGGTGGTGTGGGCGTTGTAGCGAGGAATGCTTCAGGCCAATTGGTAGGTGGTGTGGAGAAGCAAACTCGGCCCTCCAAGTTGAACTTTAGGCAATTTCAGAAGCGCTTTCTTTGGCATCTGGGCAAGGGTGGGACAAAGTGGAAATTGAATCAGACTCGAGAGACTCTAAATGCAATCAAGGGGAAAAAGAACTCAAGCTGGGAAGTTTACCCAATTCTCAGACAAATCAGACAGAAGGAAGCTCTGCTTTCCCAGATCAGGTGGTGTTGGGTACACCGTGAAGTGAACCAAGCAGCAGATTGCTTGGCATCACTTGCCAGGCGGAGGTTGTGCGCTGAGGCGTGGGTCAATAGACCCCCAAGCTCCCTTGTTTTCATTCTCTCGAAGGACGGTCTCCCCTGCCTTCCAAATGTGGAAATTGATATGCCGATGACGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

287

Amino Acids

32.86

Weight (kDa)

9.73

Isoelectric Point (pI)

42.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000093)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G09490
fragaria_vesca FvH4_1g23791 FvH4_2g01641 FvH4_2g04612 FvH4_2g06831 FvH4_2g07841 FvH4_2g13581 FvH4_2g27220 FvH4_2g30621 FvH4_2g34753 FvH4_3g10392 FvH4_3g24291 FvH4_3g25030 FvH4_3g29361 FvH4_3g31372 FvH4_3g32402 FvH4_3g43651 FvH4_4g03830 FvH4_4g05481 FvH4_4g20431 FvH4_4g21421 FvH4_4g25931 FvH4_5g08801 FvH4_5g21021 FvH4_5g26254 FvH4_5g30931 FvH4_5g31281 FvH4_5g33581 FvH4_5g35622 FvH4_6g02100 FvH4_6g07963 FvH4_6g11620 FvH4_6g16031 FvH4_6g19041 FvH4_6g24211 FvH4_6g24271 FvH4_6g30670 FvH4_6g49540 FvH4_7g25914
malus_domestica MD03G1245200.v1.1 MD04G1168000.v1.1 MD09G1242600.v1.1 MD15G1334000.v1.1 MD17G1165700.v1.1
prunus_persica Prupe.1G073500_v2.0.a1 Prupe.1G283700_v2.0.a1 Prupe.1G524100_v2.0.a1 Prupe.2G022700_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G044300_v2.0.a1 Prupe.2G048800_v2.0.a1 Prupe.2G092000_v2.0.a1 Prupe.2G216500_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.3G103400_v2.0.a1 Prupe.3G143300_v2.0.a1 Prupe.3G190000_v2.0.a1 Prupe.3G219800_v2.0.a1 Prupe.4G177800_v2.0.a1 Prupe.4G261300_v2.0.a1 Prupe.5G044600_v2.0.a1 Prupe.5G067400_v2.0.a1 Prupe.7G083900_v2.0.a1 Prupe.7G120900_v2.0.a1 Prupe.8G032200_v2.0.a1 Prupe.8G036100_v2.0.a1 Prupe.8G042700_v2.0.a1
pyrus_communis pycom01g21710 pycom02g19770 pycom03g05120 pycom05g01370 pycom05g08780 pycom05g10120 pycom07g01370 pycom07g05930 pycom08g15760 pycom08g18090 pycom08g21060 pycom09g03880 pycom10g03870 pycom13g22240 pycom16g05120 pycom16g17170 pycom17g12180 pycom17g16290 pycom17g21230 pycom17g24990 pycom215g00100
rosa_chinensis RchiOBHm_Chr1g0323031 RchiOBHm_Chr1g0324391 RchiOBHm_Chr1g0326401 RchiOBHm_Chr1g0327811 RchiOBHm_Chr1g0332521 RchiOBHm_Chr1g0336501 RchiOBHm_Chr1g0346021 RchiOBHm_Chr1g0347191 RchiOBHm_Chr1g0367181 RchiOBHm_Chr2g0089441 RchiOBHm_Chr2g0115441 RchiOBHm_Chr3g0490691 RchiOBHm_Chr4g0395251 RchiOBHm_Chr4g0398081 RchiOBHm_Chr4g0409451 RchiOBHm_Chr4g0413041 RchiOBHm_Chr4g0415471 RchiOBHm_Chr4g0420961 RchiOBHm_Chr5g0040301 RchiOBHm_Chr5g0070651 RchiOBHm_Chr6g0263011 RchiOBHm_Chr6g0270721 RchiOBHm_Chr6g0277111 RchiOBHm_Chr7g0179771 RchiOBHm_Chr7g0223051 RchiOBHm_Chr7g0225031 RchiOBHm_Chr7g0225091
rosa_laevigata RLG00000001668 RLG00000001672 RLG00000001676 RLG00000007762 RLG00000008994 RLG00000011117 RLG00000013729 RLG00000013839 RLG00000014759 RLG00000016638 RLG00000018535 RLG00000018614 RLG00000018646 RLG00000020679 RLG00000023337 RLG00000029348 RLG00000035891 RLG00000035912
rosa_multiflora Rmu_co8152500.1_g000001 Rmu_co8203314.1_g000001 Rmu_co8383183.1_g000001 Rmu_sc0000293.1_g000033 Rmu_sc0000367.1_g000226 Rmu_sc0000512.1_g000023 Rmu_sc0000594.1_g000059 Rmu_sc0000654.1_g000022 Rmu_sc0000654.1_g000047 Rmu_sc0000706.1_g000037 Rmu_sc0001348.1_g000008 Rmu_sc0001385.1_g000024 Rmu_sc0001405.1_g000002 Rmu_sc0001521.1_g000048 Rmu_sc0001932.1_g000008 Rmu_sc0001932.1_g000009 Rmu_sc0002535.1_g000011 Rmu_sc0002908.1_g000019 Rmu_sc0003709.1_g000004 Rmu_sc0003882.1_g000054 Rmu_sc0004035.1_g000007 Rmu_sc0004041.1_g000007 Rmu_sc0004288.1_g000011 Rmu_sc0004569.1_g000004 Rmu_sc0004677.1_g000016 Rmu_sc0004834.1_g000010 Rmu_sc0005193.1_g000008 Rmu_sc0005354.1_g000009 Rmu_sc0006514.1_g000021 Rmu_sc0006691.1_g000001 Rmu_sc0006888.1_g000021 Rmu_sc0006889.1_g000013 Rmu_sc0008096.1_g000017 Rmu_sc0008378.1_g000003 Rmu_sc0009127.1_g000005 Rmu_sc0009191.1_g000016 Rmu_sc0009687.1_g000018 Rmu_sc0009709.1_g000005 Rmu_sc0009880.1_g000015 Rmu_sc0011710.1_g000001 Rmu_sc0012615.1_g000004 Rmu_sc0016091.1_g000002 Rmu_sc0022339.1_g000006 Rmu_sc0026537.1_g000002 Rmu_sc0027689.1_g000002 Rmu_sc0036222.1_g000001 Rmu_sc0040890.1_g000001 Rmu_ssc0000148.1_g000006 Rmu_ssc0000151.1_g000017 Rmu_ssc0000404.1_g000018 Rmu_ssc0000449.1_g000009
rosa_roxburghii Rroxscaffold_1G00017760 Rroxscaffold_1G00059150 Rroxscaffold_2G00142560 Rroxscaffold_3G00220440 Rroxscaffold_3G00231700 Rroxscaffold_3G00232400 Rroxscaffold_3G00274510 Rroxscaffold_4G00288790 Rroxscaffold_4G00305680 Rroxscaffold_4G00314880 Rroxscaffold_4G00314900 Rroxscaffold_5G00334590 Rroxscaffold_6G00394110 Rroxscaffold_6G00415860 Rroxscaffold_7G00168240 Rroxscaffold_7G00204400 Rroxscaffold_7G00207840
rosa_rugosa Rorug01G0034900 Rorug02G0079500 Rorug02G0229000 Rorug02G0229100 Rorug02G0291400 Rorug02G0298800 Rorug03G0046400 Rorug03G0064700 Rorug03G0077300 Rorug03G0199000 Rorug03G0200400 Rorug04G0205200 Rorug05G0025400 Rorug05G0127400 Rorug05G0192100 Rorug05G0453400 Rorug05G0538300 Rorug06G0035200 Rorug06G0241000 Rorug06G0268300 Rorug07G0120300 Rorug07G0145000 Rorug07G0209100 Rorug07G0240500 Rorug07G0271700
rosa_samantha Rh1AG179100 Rh1BG106900 Rh1BG163400 Rh1BG163500 Rh1BG323500 Rh2CG447900 Rh2DG503700 Rh3AG293600 Rh3CG229100 Rh3DG221500 Rh4AG106000 Rh4BG267700 Rh4CG062500 Rh4CG090100 Rh4CG114800 Rh5AG038400 Rh5BG395400 Rh5CG441700 Rh5CG572000 Rh6AG222400 Rh6AG264500 Rh6BG137400 Rh6BG225700 Rh6CG144300 Rh6DG087600 Rh6DG096000 Rh6DG362400 Rh6DG390200 Rh7AG207500 Rh7AG324700 Rh7AG388800 Rh7AG437100 Rh7BG019000 Rh7BG374600 Rh7CG028700 Rh7CG341500 Rh7CG408000 Rh7CG408300 Rh7DG354600
rosa_wichuraiana Rw0G009630 Rw0G012170 Rw4G022700 Rw5G028420 Rw5G029490 Rw6G007220 Rw6G007410 Rw6G017880 Rw7G012440 Rw7G021830 Rw7G027490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 358
AccB1I GGYRCC 1 cut(s) 358
AccII CGCG 1 cut(s) 345
AciI CCGC 3 cut(s) 198, 343, 745
AclWI GGATC 2 cut(s) 230, 413
AcuI CTGAAG 1 cut(s) 438
AfaI GTAC 3 cut(s) 113, 360, 696
AfeI AGCGCT 1 cut(s) 527
AfiI CCNNNNNNNGG 3 cut(s) 239, 681, 747
AgeI ACCGGT 1 cut(s) 101
AgsI TTSAA 4 cut(s) 109, 388, 505, 571
AjnI CCWGG 1 cut(s) 740
AluBI AGCT 4 cut(s) 191, 621, 665, 786
AluI AGCT 4 cut(s) 191, 621, 665, 786
Alw21I GWGCWC 1 cut(s) 205
Alw26I GTCTC 3 cut(s) 314, 578, 821
AlwI GGATC 2 cut(s) 230, 413
Ama87I CYCGRG 1 cut(s) 579
Aor51HI AGCGCT 1 cut(s) 527
AoxI GGCC 4 cut(s) 162, 225, 457, 491
ApeKI GCWGC 3 cut(s) 266, 269, 716
AsiGI ACCGGT 1 cut(s) 101
Asp718I GGTACC 1 cut(s) 358
AspLEI GCGC 2 cut(s) 528, 758
AspS9I GGNCC 1 cut(s) 492
AsuC2I CCSGG 1 cut(s) 240
AsuHPI GGTGA 2 cut(s) 233, 431
AvaI CYCGRG 1 cut(s) 579
BanI GGYRCC 1 cut(s) 358
Bbv12I GWGCWC 1 cut(s) 205
BbvCI CCTCAGC 1 cut(s) 759
BbvI GCAGC 3 cut(s) 253, 256, 728
BccI CCATC 3 cut(s) 56, 87, 154
BceAI ACGGC 2 cut(s) 348, 412
BciT130I CCWGG 1 cut(s) 742
BcnI CCSGG 1 cut(s) 240
BcoDI GTCTC 3 cut(s) 314, 578, 821
BfaI CTAG 1 cut(s) 192
BfoI RGCGCY 1 cut(s) 529
BisI GCNGC 3 cut(s) 267, 270, 717
BlsI GCNGC 3 cut(s) 268, 271, 718
Bme1390I CCNGG 2 cut(s) 240, 742
BmeT110I CYCGRG 1 cut(s) 579
BmgT120I GGNCC 1 cut(s) 492
BmiI GGNNCC 1 cut(s) 360
BmrFI CCNGG 2 cut(s) 240, 742
BmsI GCATC 3 cut(s) 185, 547, 740
Bpu10I CCTNAGC 1 cut(s) 759
BpuEI CTTGAG 1 cut(s) 601
BpuMI CCSGG 1 cut(s) 240
BsaI GGTCTC 2 cut(s) 314, 821
BsaWI WCCGGW 1 cut(s) 101
Bsc4I CCNNNNNNNGG 3 cut(s) 239, 681, 747
Bse118I RCCGGY 1 cut(s) 101
Bse3DI GCAATG 1 cut(s) 124
BseBI CCWGG 1 cut(s) 742
BseLI CCNNNNNNNGG 3 cut(s) 239, 681, 747
BseMI GCAATG 1 cut(s) 124
BseMII CTCAG 3 cut(s) 123, 655, 750
BseXI GCAGC 3 cut(s) 253, 256, 728
BseYI CCCAGC 1 cut(s) 621
Bsh1236I CGCG 1 cut(s) 345
BshFI GGCC 4 cut(s) 164, 227, 459, 493
BshNI GGYRCC 1 cut(s) 358
BshTI ACCGGT 1 cut(s) 101
BsiHKAI GWGCWC 1 cut(s) 205
BsiHKCI CYCGRG 1 cut(s) 579
BsiSI CCGG 2 cut(s) 102, 239
BslFI GGGAC 1 cut(s) 568
BslI CCNNNNNNNGG 3 cut(s) 239, 681, 747
BsmAI GTCTC 3 cut(s) 314, 578, 821
BsmFI GGGAC 1 cut(s) 568
BsmI GAATGC 1 cut(s) 454
BsnI GGCC 4 cut(s) 164, 227, 459, 493
Bso31I GGTCTC 2 cut(s) 314, 821
BsoBI CYCGRG 1 cut(s) 579
Bsp1286I GDGCHC 1 cut(s) 205
Bsp143I GATC 4 cut(s) 235, 346, 405, 678
BspACI CCGC 3 cut(s) 198, 343, 745
BspANI GGCC 4 cut(s) 164, 227, 459, 493
BspCNI CTCAG 3 cut(s) 124, 654, 751
BspFNI CGCG 1 cut(s) 345
BspHI TCATGA 1 cut(s) 313
BspLI GGNNCC 1 cut(s) 360
BspPI GGATC 2 cut(s) 230, 413
BspQI GCTCTTC 1 cut(s) 11
BspT107I GGYRCC 1 cut(s) 358
BspTNI GGTCTC 2 cut(s) 314, 821
BsrDI GCAATG 1 cut(s) 124
BsrFI RCCGGY 1 cut(s) 101
BssAI RCCGGY 1 cut(s) 101
BssMI GATC 4 cut(s) 235, 346, 405, 678
Bst2UI CCWGG 1 cut(s) 742
Bst4CI ACNGT 2 cut(s) 701, 815
Bst6I CTCTTC 1 cut(s) 11
BstAPI GCANNNNNTGC 1 cut(s) 737
BstC8I GCNNGC 1 cut(s) 43
BstDEI CTNAG 3 cut(s) 132, 641, 759
BstFNI CGCG 1 cut(s) 345
BstH2I RGCGCY 1 cut(s) 529
BstHHI GCGC 2 cut(s) 528, 758
BstKTI GATC 4 cut(s) 238, 349, 408, 681
BstMAI GTCTC 3 cut(s) 314, 578, 821
BstMBI GATC 4 cut(s) 235, 346, 405, 678
BstMWI GCNNNNNNNGC 5 cut(s) 257, 266, 449, 490, 737
BstNI CCWGG 1 cut(s) 742
BstNSI RCATGY 1 cut(s) 290
BstSCI CCNGG 2 cut(s) 238, 740
BstUI CGCG 1 cut(s) 345
BstV1I GCAGC 3 cut(s) 253, 256, 728
BsuRI GGCC 4 cut(s) 164, 227, 459, 493
BtsI GCAGTG 1 cut(s) 421
BtsIMutI CAGTG 1 cut(s) 421
Cac8I GCNNGC 1 cut(s) 43
CciI TCATGA 1 cut(s) 313
CfoI GCGC 2 cut(s) 528, 758
Cfr10I RCCGGY 1 cut(s) 101
Cfr13I GGNCC 1 cut(s) 492
Csp6I GTAC 3 cut(s) 112, 359, 695
CspAI ACCGGT 1 cut(s) 101
CspCI CAANNNNNGTGG 2 cut(s) 397, 432
CviAII CATG 3 cut(s) 287, 314, 402
CviQI GTAC 3 cut(s) 112, 359, 695
DdeI CTNAG 3 cut(s) 132, 641, 759
DpnI GATC 4 cut(s) 237, 348, 407, 680
DpnII GATC 4 cut(s) 235, 346, 405, 678
Eam1104I CTCTTC 1 cut(s) 11
EarI CTCTTC 1 cut(s) 11
EciI GGCGGA 1 cut(s) 760
Eco147I AGGCCT 1 cut(s) 227
Eco31I GGTCTC 2 cut(s) 314, 821
Eco47III AGCGCT 1 cut(s) 527
Eco57I CTGAAG 1 cut(s) 438
Eco88I CYCGRG 1 cut(s) 579
EcoRII CCWGG 1 cut(s) 740
FaeI CATG 3 cut(s) 290, 317, 405
FalI AAGNNNNNCTT 4 cut(s) 491, 523, 654, 686
FaqI GGGAC 1 cut(s) 568
FatI CATG 3 cut(s) 286, 313, 401
Fnu4HI GCNGC 3 cut(s) 267, 270, 717
Fsp4HI GCNGC 3 cut(s) 267, 270, 717
FspBI CTAG 1 cut(s) 192
GlaI GCGC 2 cut(s) 527, 757
GluI GCNGC 3 cut(s) 267, 270, 717
GsaI CCCAGC 1 cut(s) 625
HaeII RGCGCY 1 cut(s) 529
HaeIII GGCC 4 cut(s) 164, 227, 459, 493
HapII CCGG 2 cut(s) 102, 239
HhaI GCGC 2 cut(s) 528, 758
Hin1II CATG 3 cut(s) 290, 317, 405
Hin6I GCGC 2 cut(s) 526, 756
HinP1I GCGC 2 cut(s) 526, 756
HincII GTYRAC 1 cut(s) 394
HindII GTYRAC 1 cut(s) 394
HinfI GANTC 6 cut(s) 148, 310, 339, 571, 577, 586
HpaI GTTAAC 1 cut(s) 394
HpaII CCGG 2 cut(s) 102, 239
HphI GGTGA 2 cut(s) 233, 431
Hpy166II GTNNAC 4 cut(s) 394, 631, 697, 709
Hpy188I TCNGA 7 cut(s) 72, 309, 373, 522, 576, 644, 653
Hpy188III TCNNGA 4 cut(s) 314, 409, 581, 805
Hpy8I GTNNAC 4 cut(s) 394, 631, 697, 709
HpyAV CCTTC 4 cut(s) 416, 652, 802, 836
HpyCH4III ACNGT 2 cut(s) 701, 815
HpyCH4V TGCA 3 cut(s) 41, 286, 596
HpyF10VI GCNNNNNNNGC 5 cut(s) 257, 266, 449, 490, 737
HpyF3I CTNAG 3 cut(s) 132, 641, 759
Hsp92II CATG 3 cut(s) 290, 317, 405
HspAI GCGC 2 cut(s) 526, 756
KpnI GGTACC 1 cut(s) 362
KspAI GTTAAC 1 cut(s) 394
Kzo9I GATC 4 cut(s) 235, 346, 405, 678
LguI GCTCTTC 1 cut(s) 11
LmnI GCTCC 2 cut(s) 200, 791
Lsp1109I GCAGC 3 cut(s) 253, 256, 728
LweI GCATC 3 cut(s) 185, 547, 740
MaeI CTAG 1 cut(s) 192
MalI GATC 4 cut(s) 237, 348, 407, 680
MboI GATC 4 cut(s) 235, 346, 405, 678
MboII GAAGA 1 cut(s) 246
MfeI CAATTG 1 cut(s) 461
MhlI GDGCHC 1 cut(s) 205
MluCI AATT 8 cut(s) 52, 142, 383, 461, 515, 566, 636, 840
MlyI GAGTC 2 cut(s) 571, 580
MnlI CCTC 6 cut(s) 217, 372, 438, 505, 741, 754
MseI TTAA 2 cut(s) 77, 393
MslI CAYNNNNRTG 1 cut(s) 219
MspI CCGG 2 cut(s) 102, 239
MspR9I CCNGG 2 cut(s) 240, 742
MunI CAATTG 1 cut(s) 461
Mva1269I GAATGC 1 cut(s) 454
MvaI CCWGG 1 cut(s) 742
MvnI CGCG 1 cut(s) 345
MwoI GCNNNNNNNGC 5 cut(s) 257, 266, 449, 490, 737
NciI CCSGG 1 cut(s) 240
NdeII GATC 4 cut(s) 235, 346, 405, 678
NlaIII CATG 3 cut(s) 290, 317, 405
NlaIV GGNNCC 1 cut(s) 360
NmeAIII GCCGAG 1 cut(s) 469
NspI RCATGY 1 cut(s) 290
PaeR7I CTCGAG 1 cut(s) 579
PagI TCATGA 1 cut(s) 313
PceI AGGCCT 1 cut(s) 227
PciSI GCTCTTC 1 cut(s) 11
PctI GAATGC 1 cut(s) 454
PfeI GAWTC 4 cut(s) 148, 310, 339, 571
PinAI ACCGGT 1 cut(s) 101
PkrI GCNGC 3 cut(s) 268, 271, 718
PleI GAGTC 2 cut(s) 571, 580
PpsI GAGTC 2 cut(s) 571, 580
Psp6I CCWGG 1 cut(s) 740
PspFI CCCAGC 1 cut(s) 621
PspGI CCWGG 1 cut(s) 740
PspN4I GGNNCC 1 cut(s) 360
PspPI GGNCC 1 cut(s) 492
RsaI GTAC 3 cut(s) 113, 360, 696
RsaNI GTAC 3 cut(s) 112, 359, 695
RseI CAYNNNNRTG 1 cut(s) 219
SapI GCTCTTC 1 cut(s) 11
SaqAI TTAA 2 cut(s) 77, 393
SatI GCNGC 3 cut(s) 267, 270, 717
Sau3AI GATC 4 cut(s) 235, 346, 405, 678
Sau96I GGNCC 1 cut(s) 492
SchI GAGTC 2 cut(s) 571, 580
ScrFI CCNGG 2 cut(s) 240, 742
SduI GDGCHC 1 cut(s) 205
SfaNI GCATC 3 cut(s) 185, 547, 740
Sfr274I CTCGAG 1 cut(s) 579
SlaI CTCGAG 1 cut(s) 579
SmiMI CAYNNNNRTG 1 cut(s) 219
SmlI CTYRAG 2 cut(s) 579, 616
SmoI CTYRAG 2 cut(s) 579, 616
Sse9I AATT 8 cut(s) 52, 142, 383, 461, 515, 566, 636, 840
SseBI AGGCCT 1 cut(s) 227
SsiI CCGC 3 cut(s) 198, 343, 745
SspMI CTAG 1 cut(s) 192
StuI AGGCCT 1 cut(s) 227
StyD4I CCNGG 2 cut(s) 238, 740
TaaI ACNGT 2 cut(s) 701, 815
TaqI TCGA 2 cut(s) 580, 806
TasI AATT 8 cut(s) 52, 142, 383, 461, 515, 566, 636, 840
TatI WGTACW 1 cut(s) 111
TfiI GAWTC 4 cut(s) 148, 310, 339, 571
Tru1I TTAA 2 cut(s) 77, 393
Tru9I TTAA 2 cut(s) 77, 393
TscAI CASTG 1 cut(s) 421
TseI GCWGC 3 cut(s) 266, 269, 716
TspDTI ATGAA 2 cut(s) 367, 787
TspRI CASTG 1 cut(s) 421
XceI RCATGY 1 cut(s) 290
XcmI CCANNNNNNNNNTGG 1 cut(s) 467
XhoI CTCGAG 1 cut(s) 579
XspI CTAG 1 cut(s) 192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.