Rorug03G0064700

Transducin beta-like protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Reverse (-)
4785689 .. 4788038
2350 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0064700.1

Sequence Viewer

Length: 702 bp
ATGGCTTCATCATCGGATCGGTTTAGTATTGAACTTCAACAAGTTGAGCAAAGTATGATTGACCAAGAGGTGTTGAAGGAGTGCGTCGATGGAGTTGGAAACCGGACACCTGAGCCACGCCAGGGAGTGCCAAATGGTCGTCTAATCCGCATTCAATTGTGGCCTCCTCCTCCGCCCCGTGATGATTATAGGGCTACTGTGAGGTATATAGAATACGCAAGAAGTCAACTTAAGAATGGAATCGTTTCACAACAAATGGTAGATTCGGCTAAGGAAACGGTACGCCGCCTTAGATCGAAAGGATATTCCAACTTAGATGAGGATGAAGCAATCACTCTAAAGGACAGCATTCACTTCCTTGGTAGGCTAGAAAGCACCCCCTCTTTCTTTAGGGAGAGGTTTCTTAAATTTGCTGAAGACATTCCAAGCCGTGTCCGCTGCCTCCGTCAAATGCAGGAAACATTGATTGATCAGCCAAATCTTGTAGAGCAAGAGAGACAATGCATAGCCGAAATTCAGAACAGAATGCGAGCCCGCGCTCTAAGAAACCAACAGTTGGATGAGGAAGAAGTGACGGTCACTTGTGAGAGGGCTAAGAGAGAAGAGGAGAAAGAGGTTCTAATCACCAGATTGGAGGACATTCGCCGCAATTTGACTGAAACTTCCACAGCCTTGTCTTATATAGATGGTGGGAGGATCTGA

Protein Analysis

233

Amino Acids

27.15

Weight (kDa)

5.56

Isoelectric Point (pI)

59.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000093)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G09490
fragaria_vesca FvH4_1g23791 FvH4_2g01641 FvH4_2g04612 FvH4_2g06831 FvH4_2g07841 FvH4_2g13581 FvH4_2g27220 FvH4_2g30621 FvH4_2g34753 FvH4_3g10392 FvH4_3g24291 FvH4_3g25030 FvH4_3g29361 FvH4_3g31372 FvH4_3g32402 FvH4_3g43651 FvH4_4g03830 FvH4_4g05481 FvH4_4g20431 FvH4_4g21421 FvH4_4g25931 FvH4_5g08801 FvH4_5g21021 FvH4_5g26254 FvH4_5g30931 FvH4_5g31281 FvH4_5g33581 FvH4_5g35622 FvH4_6g02100 FvH4_6g07963 FvH4_6g11620 FvH4_6g16031 FvH4_6g19041 FvH4_6g24211 FvH4_6g24271 FvH4_6g30670 FvH4_6g49540 FvH4_7g25914
malus_domestica MD03G1245200.v1.1 MD04G1168000.v1.1 MD09G1242600.v1.1 MD15G1334000.v1.1 MD17G1165700.v1.1
prunus_persica Prupe.1G073500_v2.0.a1 Prupe.1G283700_v2.0.a1 Prupe.1G524100_v2.0.a1 Prupe.2G022700_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G044300_v2.0.a1 Prupe.2G048800_v2.0.a1 Prupe.2G092000_v2.0.a1 Prupe.2G216500_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.3G103400_v2.0.a1 Prupe.3G143300_v2.0.a1 Prupe.3G190000_v2.0.a1 Prupe.3G219800_v2.0.a1 Prupe.4G177800_v2.0.a1 Prupe.4G261300_v2.0.a1 Prupe.5G044600_v2.0.a1 Prupe.5G067400_v2.0.a1 Prupe.7G083900_v2.0.a1 Prupe.7G120900_v2.0.a1 Prupe.8G032200_v2.0.a1 Prupe.8G036100_v2.0.a1 Prupe.8G042700_v2.0.a1
pyrus_communis pycom01g21710 pycom02g19770 pycom03g05120 pycom05g01370 pycom05g08780 pycom05g10120 pycom07g01370 pycom07g05930 pycom08g15760 pycom08g18090 pycom08g21060 pycom09g03880 pycom10g03870 pycom13g22240 pycom16g05120 pycom16g17170 pycom17g12180 pycom17g16290 pycom17g21230 pycom17g24990 pycom215g00100
rosa_chinensis RchiOBHm_Chr1g0323031 RchiOBHm_Chr1g0324391 RchiOBHm_Chr1g0326401 RchiOBHm_Chr1g0327811 RchiOBHm_Chr1g0332521 RchiOBHm_Chr1g0336501 RchiOBHm_Chr1g0346021 RchiOBHm_Chr1g0347191 RchiOBHm_Chr1g0367181 RchiOBHm_Chr2g0089441 RchiOBHm_Chr2g0115441 RchiOBHm_Chr3g0490691 RchiOBHm_Chr4g0395251 RchiOBHm_Chr4g0398081 RchiOBHm_Chr4g0409451 RchiOBHm_Chr4g0413041 RchiOBHm_Chr4g0415471 RchiOBHm_Chr4g0420961 RchiOBHm_Chr5g0040301 RchiOBHm_Chr5g0070651 RchiOBHm_Chr6g0263011 RchiOBHm_Chr6g0270721 RchiOBHm_Chr6g0277111 RchiOBHm_Chr7g0179771 RchiOBHm_Chr7g0223051 RchiOBHm_Chr7g0225031 RchiOBHm_Chr7g0225091
rosa_laevigata RLG00000001668 RLG00000001672 RLG00000001676 RLG00000007762 RLG00000008994 RLG00000011117 RLG00000013729 RLG00000013839 RLG00000014759 RLG00000016638 RLG00000018535 RLG00000018614 RLG00000018646 RLG00000020679 RLG00000023337 RLG00000029348 RLG00000035891 RLG00000035912
rosa_multiflora Rmu_co8152500.1_g000001 Rmu_co8203314.1_g000001 Rmu_co8383183.1_g000001 Rmu_sc0000293.1_g000033 Rmu_sc0000367.1_g000226 Rmu_sc0000512.1_g000023 Rmu_sc0000594.1_g000059 Rmu_sc0000654.1_g000022 Rmu_sc0000654.1_g000047 Rmu_sc0000706.1_g000037 Rmu_sc0001348.1_g000008 Rmu_sc0001385.1_g000024 Rmu_sc0001405.1_g000002 Rmu_sc0001521.1_g000048 Rmu_sc0001932.1_g000008 Rmu_sc0001932.1_g000009 Rmu_sc0002535.1_g000011 Rmu_sc0002908.1_g000019 Rmu_sc0003709.1_g000004 Rmu_sc0003882.1_g000054 Rmu_sc0004035.1_g000007 Rmu_sc0004041.1_g000007 Rmu_sc0004288.1_g000011 Rmu_sc0004569.1_g000004 Rmu_sc0004677.1_g000016 Rmu_sc0004834.1_g000010 Rmu_sc0005193.1_g000008 Rmu_sc0005354.1_g000009 Rmu_sc0006514.1_g000021 Rmu_sc0006691.1_g000001 Rmu_sc0006888.1_g000021 Rmu_sc0006889.1_g000013 Rmu_sc0008096.1_g000017 Rmu_sc0008378.1_g000003 Rmu_sc0009127.1_g000005 Rmu_sc0009191.1_g000016 Rmu_sc0009687.1_g000018 Rmu_sc0009709.1_g000005 Rmu_sc0009880.1_g000015 Rmu_sc0011710.1_g000001 Rmu_sc0012615.1_g000004 Rmu_sc0016091.1_g000002 Rmu_sc0022339.1_g000006 Rmu_sc0026537.1_g000002 Rmu_sc0027689.1_g000002 Rmu_sc0036222.1_g000001 Rmu_sc0040890.1_g000001 Rmu_ssc0000148.1_g000006 Rmu_ssc0000151.1_g000017 Rmu_ssc0000404.1_g000018 Rmu_ssc0000449.1_g000009
rosa_roxburghii Rroxscaffold_1G00017760 Rroxscaffold_1G00059150 Rroxscaffold_2G00142560 Rroxscaffold_3G00220440 Rroxscaffold_3G00231700 Rroxscaffold_3G00232400 Rroxscaffold_3G00274510 Rroxscaffold_4G00288790 Rroxscaffold_4G00305680 Rroxscaffold_4G00314880 Rroxscaffold_4G00314900 Rroxscaffold_5G00334590 Rroxscaffold_6G00394110 Rroxscaffold_6G00415860 Rroxscaffold_7G00168240 Rroxscaffold_7G00204400 Rroxscaffold_7G00207840
rosa_rugosa Rorug01G0034900 Rorug02G0079500 Rorug02G0229000 Rorug02G0229100 Rorug02G0291400 Rorug02G0298800 Rorug03G0046400 Rorug03G0064700 Rorug03G0077300 Rorug03G0199000 Rorug03G0200400 Rorug04G0205200 Rorug05G0025400 Rorug05G0127400 Rorug05G0192100 Rorug05G0453400 Rorug05G0538300 Rorug06G0035200 Rorug06G0241000 Rorug06G0268300 Rorug07G0120300 Rorug07G0145000 Rorug07G0209100 Rorug07G0240500 Rorug07G0271700
rosa_samantha Rh1AG179100 Rh1BG106900 Rh1BG163400 Rh1BG163500 Rh1BG323500 Rh2CG447900 Rh2DG503700 Rh3AG293600 Rh3CG229100 Rh3DG221500 Rh4AG106000 Rh4BG267700 Rh4CG062500 Rh4CG090100 Rh4CG114800 Rh5AG038400 Rh5BG395400 Rh5CG441700 Rh5CG572000 Rh6AG222400 Rh6AG264500 Rh6BG137400 Rh6BG225700 Rh6CG144300 Rh6DG087600 Rh6DG096000 Rh6DG362400 Rh6DG390200 Rh7AG207500 Rh7AG324700 Rh7AG388800 Rh7AG437100 Rh7BG019000 Rh7BG374600 Rh7CG028700 Rh7CG341500 Rh7CG408000 Rh7CG408300 Rh7DG354600
rosa_wichuraiana Rw0G009630 Rw0G012170 Rw4G022700 Rw5G028420 Rw5G029490 Rw6G007220 Rw6G007410 Rw6G017880 Rw7G012440 Rw7G021830 Rw7G027490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 556
AccII CGCG 1 cut(s) 537
AciI CCGC 6 cut(s) 148, 173, 286, 436, 535, 646
AclWI GGATC 1 cut(s) 24
AcsI RAATTY 2 cut(s) 407, 513
AcuI CTGAAG 1 cut(s) 435
AfaI GTAC 1 cut(s) 282
AfiI CCNNNNNNNGG 2 cut(s) 122, 556
AflII CTTAAG 1 cut(s) 230
AgsI TTSAA 4 cut(s) 32, 38, 76, 155
AjnI CCWGG 1 cut(s) 120
Alw26I GTCTC 1 cut(s) 490
AlwI GGATC 1 cut(s) 24
AoxI GGCC 1 cut(s) 161
ApeKI GCWGC 1 cut(s) 438
ApoI RAATTY 2 cut(s) 407, 513
Asp700I GAANNNNTTC 2 cut(s) 244, 420
AspLEI GCGC 1 cut(s) 539
AsuHPI GGTGA 1 cut(s) 616
BanII GRGCYC 1 cut(s) 535
BbsI GAAGAC 1 cut(s) 423
BbvI GCAGC 1 cut(s) 425
BccI CCATC 2 cut(s) 83, 680
BceAI ACGGC 1 cut(s) 414
BciT130I CCWGG 1 cut(s) 122
BclI TGATCA 1 cut(s) 469
BcoDI GTCTC 1 cut(s) 490
BfaI CTAG 1 cut(s) 368
BfrI CTTAAG 1 cut(s) 230
BisI GCNGC 3 cut(s) 286, 439, 646
BlsI GCNGC 3 cut(s) 287, 440, 647
Bme1390I CCNGG 1 cut(s) 122
BmrFI CCNGG 1 cut(s) 122
BpiI GAAGAC 1 cut(s) 423
Bpu10I CCTNAGC 2 cut(s) 111, 270
BsaJI CCNNGG 2 cut(s) 121, 358
BsaWI WCCGGW 1 cut(s) 102
Bsc4I CCNNNNNNNGG 2 cut(s) 122, 556
BseBI CCWGG 1 cut(s) 122
BseDI CCNNGG 2 cut(s) 121, 358
BseGI GGATG 2 cut(s) 328, 565
BseLI CCNNNNNNNGG 2 cut(s) 122, 556
BseMII CTCAG 1 cut(s) 102
BseRI GAGGAG 3 cut(s) 156, 159, 620
BseXI GCAGC 1 cut(s) 425
Bsh1236I CGCG 1 cut(s) 537
BshFI GGCC 1 cut(s) 163
BsiSI CCGG 1 cut(s) 103
BslI CCNNNNNNNGG 2 cut(s) 122, 556
BsmAI GTCTC 1 cut(s) 490
BsmI GAATGC 3 cut(s) 150, 348, 531
BsnI GGCC 1 cut(s) 163
Bsp1286I GDGCHC 1 cut(s) 535
Bsp143I GATC 4 cut(s) 16, 293, 469, 696
BspACI CCGC 6 cut(s) 148, 173, 286, 436, 535, 646
BspANI GGCC 1 cut(s) 163
BspCNI CTCAG 1 cut(s) 103
BspFNI CGCG 1 cut(s) 537
BspPI GGATC 1 cut(s) 24
BspTI CTTAAG 1 cut(s) 230
BssECI CCNNGG 2 cut(s) 121, 358
BssMI GATC 4 cut(s) 16, 293, 469, 696
BssT1I CCWWGG 1 cut(s) 358
Bst2UI CCWGG 1 cut(s) 122
Bst4CI ACNGT 4 cut(s) 199, 280, 555, 577
Bst6I CTCTTC 1 cut(s) 597
BstAFI CTTAAG 1 cut(s) 230
BstC8I GCNNGC 2 cut(s) 531, 535
BstDEI CTNAG 6 cut(s) 111, 270, 290, 313, 542, 594
BstF5I GGATG 2 cut(s) 328, 565
BstFNI CGCG 1 cut(s) 537
BstHHI GCGC 1 cut(s) 539
BstKTI GATC 4 cut(s) 19, 296, 472, 699
BstMAI GTCTC 1 cut(s) 490
BstMBI GATC 4 cut(s) 16, 293, 469, 696
BstMWI GCNNNNNNNGC 1 cut(s) 435
BstNI CCWGG 1 cut(s) 122
BstSCI CCNGG 1 cut(s) 120
BstUI CGCG 1 cut(s) 537
BstV1I GCAGC 1 cut(s) 425
BstV2I GAAGAC 1 cut(s) 423
BstX2I RGATCY 1 cut(s) 696
BstYI RGATCY 1 cut(s) 696
BsuRI GGCC 1 cut(s) 163
BtsCI GGATG 2 cut(s) 328, 565
Cac8I GCNNGC 2 cut(s) 531, 535
CfoI GCGC 1 cut(s) 539
CseI GACGC 1 cut(s) 73
Csp6I GTAC 1 cut(s) 281
CviQI GTAC 1 cut(s) 281
DdeI CTNAG 6 cut(s) 111, 270, 290, 313, 542, 594
DpnI GATC 4 cut(s) 18, 295, 471, 698
DpnII GATC 4 cut(s) 16, 293, 469, 696
Eam1104I CTCTTC 1 cut(s) 597
EarI CTCTTC 1 cut(s) 597
EciI GGCGGA 1 cut(s) 162
Eco130I CCWWGG 1 cut(s) 358
Eco24I GRGCYC 1 cut(s) 535
Eco57I CTGAAG 1 cut(s) 435
EcoRII CCWGG 1 cut(s) 120
EcoT14I CCWWGG 1 cut(s) 358
EcoT22I ATGCAT 1 cut(s) 506
EcoT38I GRGCYC 1 cut(s) 535
ErhI CCWWGG 1 cut(s) 358
FaiI YATR 7 cut(s) 56, 189, 207, 209, 506, 681, 683
FauI CCCGC 1 cut(s) 542
FbaI TGATCA 1 cut(s) 469
Fnu4HI GCNGC 3 cut(s) 286, 439, 646
FokI GGATG 2 cut(s) 335, 572
FriOI GRGCYC 1 cut(s) 535
Fsp4HI GCNGC 3 cut(s) 286, 439, 646
FspBI CTAG 1 cut(s) 368
GlaI GCGC 1 cut(s) 538
GluI GCNGC 3 cut(s) 286, 439, 646
HaeIII GGCC 1 cut(s) 163
HapII CCGG 1 cut(s) 103
HgaI GACGC 1 cut(s) 73
HhaI GCGC 1 cut(s) 539
Hin6I GCGC 1 cut(s) 537
HinP1I GCGC 1 cut(s) 537
HincII GTYRAC 1 cut(s) 227
HindII GTYRAC 1 cut(s) 227
HinfI GANTC 2 cut(s) 240, 263
HpaII CCGG 1 cut(s) 103
HphI GGTGA 1 cut(s) 616
Hpy166II GTNNAC 1 cut(s) 227
Hpy188I TCNGA 3 cut(s) 16, 519, 701
Hpy8I GTNNAC 1 cut(s) 227
Hpy99I CGWCG 1 cut(s) 89
HpyAV CCTTC 1 cut(s) 70
HpyCH4III ACNGT 4 cut(s) 199, 280, 555, 577
HpyCH4V TGCA 2 cut(s) 454, 504
HpyF10VI GCNNNNNNNGC 1 cut(s) 435
HpyF3I CTNAG 6 cut(s) 111, 270, 290, 313, 542, 594
HspAI GCGC 1 cut(s) 537
Ksp22I TGATCA 1 cut(s) 469
Kzo9I GATC 4 cut(s) 16, 293, 469, 696
LpnPI CCDG 6 cut(s) 107, 116, 123, 134, 440, 640
Lsp1109I GCAGC 1 cut(s) 425
MaeI CTAG 1 cut(s) 368
MaeIII GTNAC 2 cut(s) 571, 577
MalI GATC 4 cut(s) 18, 295, 471, 698
MboI GATC 4 cut(s) 16, 293, 469, 696
MboII GAAGA 3 cut(s) 428, 578, 614
MfeI CAATTG 1 cut(s) 155
MflI RGATCY 1 cut(s) 696
MhlI GDGCHC 1 cut(s) 535
MluCI AATT 4 cut(s) 155, 407, 513, 649
MmeI TCCRAC 3 cut(s) 76, 333, 537
Mph1103I ATGCAT 1 cut(s) 506
MroXI GAANNNNTTC 2 cut(s) 244, 420
MseI TTAA 2 cut(s) 231, 405
MspA1I CMGCKG 1 cut(s) 438
MspCI CTTAAG 1 cut(s) 230
MspI CCGG 1 cut(s) 103
MspR9I CCNGG 1 cut(s) 122
MunI CAATTG 1 cut(s) 155
Mva1269I GAATGC 3 cut(s) 150, 348, 531
MvaI CCWGG 1 cut(s) 122
MvnI CGCG 1 cut(s) 537
MwoI GCNNNNNNNGC 1 cut(s) 435
NdeII GATC 4 cut(s) 16, 293, 469, 696
NmuCI GTSAC 2 cut(s) 571, 577
NsiI ATGCAT 1 cut(s) 506
PctI GAATGC 3 cut(s) 150, 348, 531
PdmI GAANNNNTTC 2 cut(s) 244, 420
PfeI GAWTC 2 cut(s) 240, 263
PflMI CCANNNNNTGG 1 cut(s) 556
PkrI GCNGC 3 cut(s) 287, 440, 647
Psp6I CCWGG 1 cut(s) 120
PspGI CCWGG 1 cut(s) 120
PsuI RGATCY 1 cut(s) 696
RsaI GTAC 1 cut(s) 282
RsaNI GTAC 1 cut(s) 281
SaqAI TTAA 2 cut(s) 231, 405
SatI GCNGC 3 cut(s) 286, 439, 646
Sau3AI GATC 4 cut(s) 16, 293, 469, 696
ScrFI CCNGG 1 cut(s) 122
SduI GDGCHC 1 cut(s) 535
SetI ASST 5 cut(s) 72, 112, 206, 401, 618
SmlI CTYRAG 1 cut(s) 230
SmoI CTYRAG 1 cut(s) 230
Sse9I AATT 4 cut(s) 155, 407, 513, 649
SsiI CCGC 6 cut(s) 148, 173, 286, 436, 535, 646
SspMI CTAG 1 cut(s) 368
StyD4I CCNGG 1 cut(s) 120
StyI CCWWGG 1 cut(s) 358
TaaI ACNGT 4 cut(s) 199, 280, 555, 577
TaqI TCGA 2 cut(s) 87, 296
TasI AATT 4 cut(s) 155, 407, 513, 649
TauI GCSGC 2 cut(s) 288, 648
TfiI GAWTC 2 cut(s) 240, 263
Tru1I TTAA 2 cut(s) 231, 405
Tru9I TTAA 2 cut(s) 231, 405
TseFI GTSAC 2 cut(s) 571, 577
TseI GCWGC 1 cut(s) 438
Tsp45I GTSAC 2 cut(s) 571, 577
TspDTI ATGAA 1 cut(s) 339
TspGWI ACGGA 1 cut(s) 434
Van91I CCANNNNNTGG 1 cut(s) 556
Vha464I CTTAAG 1 cut(s) 230
XapI RAATTY 2 cut(s) 407, 513
XmnI GAANNNNTTC 2 cut(s) 244, 420
XspI CTAG 1 cut(s) 368
Zsp2I ATGCAT 1 cut(s) 506
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.