DNA mismatch repair protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| HATPase_c_3 | PF13589 | 153 - 192 | 5.5e-07 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 253 |
| AccBSI | CCGCTC | 1 cut(s) | 130 |
| AccII | CGCG | 1 cut(s) | 598 |
| AciI | CCGC | 4 cut(s) | 130, 397, 429, 531 |
| AcoI | YGGCCR | 1 cut(s) | 562 |
| AcsI | RAATTY | 2 cut(s) | 175, 390 |
| AcyI | GRCGYC | 1 cut(s) | 492 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 76 |
| AgeI | ACCGGT | 1 cut(s) | 333 |
| AgsI | TTSAA | 2 cut(s) | 88, 466 |
| AjnI | CCWGG | 3 cut(s) | 60, 69, 108 |
| AluBI | AGCT | 2 cut(s) | 472, 541 |
| AluI | AGCT | 2 cut(s) | 472, 541 |
| Alw21I | GWGCWC | 1 cut(s) | 474 |
| Alw26I | GTCTC | 2 cut(s) | 460, 556 |
| AoxI | GGCC | 3 cut(s) | 72, 532, 562 |
| ApoI | RAATTY | 2 cut(s) | 175, 390 |
| AsiGI | ACCGGT | 1 cut(s) | 333 |
| AspS9I | GGNCC | 1 cut(s) | 64 |
| AsuHPI | GGTGA | 4 cut(s) | 271, 323, 386, 446 |
| AvaII | GGWCC | 1 cut(s) | 64 |
| BanII | GRGCYC | 2 cut(s) | 276, 474 |
| BbsI | GAAGAC | 1 cut(s) | 76 |
| Bbv12I | GWGCWC | 1 cut(s) | 474 |
| BceAI | ACGGC | 2 cut(s) | 544, 577 |
| BciT130I | CCWGG | 3 cut(s) | 62, 71, 110 |
| BcoDI | GTCTC | 2 cut(s) | 460, 556 |
| BfaI | CTAG | 1 cut(s) | 239 |
| BisI | GCNGC | 2 cut(s) | 429, 532 |
| BlsI | GCNGC | 2 cut(s) | 430, 533 |
| Bme1390I | CCNGG | 3 cut(s) | 62, 71, 110 |
| Bme18I | GGWCC | 1 cut(s) | 64 |
| BmgT120I | GGNCC | 1 cut(s) | 64 |
| BmiI | GGNNCC | 2 cut(s) | 160, 381 |
| BmrFI | CCNGG | 3 cut(s) | 62, 71, 110 |
| BmsI | GCATC | 2 cut(s) | 199, 208 |
| BpiI | GAAGAC | 1 cut(s) | 76 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 235, 267 |
| BpmI | CTGGAG | 1 cut(s) | 53 |
| BpuEI | CTTGAG | 1 cut(s) | 521 |
| BsaHI | GRCGYC | 1 cut(s) | 492 |
| BsaJI | CCNNGG | 5 cut(s) | 75, 213, 251, 400, 565 |
| BsaWI | WCCGGW | 2 cut(s) | 136, 333 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 367, 397, 482, 488, 512, 518 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 76 |
| Bse118I | RCCGGY | 2 cut(s) | 333, 431 |
| BseBI | CCWGG | 3 cut(s) | 62, 71, 110 |
| BseDI | CCNNGG | 5 cut(s) | 75, 213, 251, 400, 565 |
| BseGI | GGATG | 2 cut(s) | 441, 543 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 76 |
| BseRI | GAGGAG | 3 cut(s) | 240, 490, 493 |
| Bsh1236I | CGCG | 1 cut(s) | 598 |
| Bsh1285I | CGRYCG | 2 cut(s) | 81, 257 |
| BshFI | GGCC | 3 cut(s) | 74, 534, 564 |
| BshTI | ACCGGT | 1 cut(s) | 333 |
| BsiEI | CGRYCG | 2 cut(s) | 81, 257 |
| BsiHKAI | GWGCWC | 1 cut(s) | 474 |
| BsiSI | CCGG | 4 cut(s) | 137, 334, 432, 613 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 76 |
| BsmAI | GTCTC | 2 cut(s) | 460, 556 |
| BsnI | GGCC | 3 cut(s) | 74, 534, 564 |
| Bsp1286I | GDGCHC | 2 cut(s) | 276, 474 |
| Bsp19I | CCATGG | 1 cut(s) | 213 |
| BspACI | CCGC | 4 cut(s) | 130, 397, 429, 531 |
| BspANI | GGCC | 3 cut(s) | 74, 534, 564 |
| BspFNI | CGCG | 1 cut(s) | 598 |
| BspLI | GGNNCC | 2 cut(s) | 160, 381 |
| BsrBI | CCGCTC | 1 cut(s) | 130 |
| BsrFI | RCCGGY | 2 cut(s) | 333, 431 |
| BssAI | RCCGGY | 2 cut(s) | 333, 431 |
| BssECI | CCNNGG | 5 cut(s) | 75, 213, 251, 400, 565 |
| BssNI | GRCGYC | 1 cut(s) | 492 |
| BssT1I | CCWWGG | 2 cut(s) | 213, 400 |
| Bst2UI | CCWGG | 3 cut(s) | 62, 71, 110 |
| Bst4CI | ACNGT | 2 cut(s) | 286, 632 |
| BstACI | GRCGYC | 1 cut(s) | 492 |
| BstDEI | CTNAG | 1 cut(s) | 306 |
| BstDSI | CCRYGG | 2 cut(s) | 213, 565 |
| BstEII | GGTNACC | 1 cut(s) | 132 |
| BstF5I | GGATG | 2 cut(s) | 441, 543 |
| BstFNI | CGCG | 1 cut(s) | 598 |
| BstMAI | GTCTC | 2 cut(s) | 460, 556 |
| BstMCI | CGRYCG | 2 cut(s) | 81, 257 |
| BstNI | CCWGG | 3 cut(s) | 62, 71, 110 |
| BstPI | GGTNACC | 1 cut(s) | 132 |
| BstSCI | CCNGG | 3 cut(s) | 60, 69, 108 |
| BstUI | CGCG | 1 cut(s) | 598 |
| BstV2I | GAAGAC | 1 cut(s) | 76 |
| BsuRI | GGCC | 3 cut(s) | 74, 534, 564 |
| BtgI | CCRYGG | 2 cut(s) | 213, 565 |
| BtgZI | GCGATG | 1 cut(s) | 185 |
| BtsCI | GGATG | 2 cut(s) | 441, 543 |
| Cfr10I | RCCGGY | 2 cut(s) | 333, 431 |
| Cfr13I | GGNCC | 1 cut(s) | 64 |
| CseI | GACGC | 1 cut(s) | 500 |
| CsiI | ACCWGGT | 1 cut(s) | 108 |
| CspAI | ACCGGT | 1 cut(s) | 333 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 335, 370 |
| CviAII | CATG | 1 cut(s) | 214 |
| CviJI | RGCY | 9 cut(s) | 74, 274, 382, 472, 486, 534, 541, 564, 582 |
| CviKI_1 | RGCY | 9 cut(s) | 74, 274, 382, 472, 486, 534, 541, 564, 582 |
| DdeI | CTNAG | 1 cut(s) | 306 |
| DraI | TTTAAA | 1 cut(s) | 181 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 253 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 253 |
| EaeI | YGGCCR | 1 cut(s) | 562 |
| Ecl136II | GAGCTC | 1 cut(s) | 472 |
| Eco130I | CCWWGG | 2 cut(s) | 213, 400 |
| Eco147I | AGGCCT | 1 cut(s) | 74 |
| Eco24I | GRGCYC | 2 cut(s) | 276, 474 |
| Eco47I | GGWCC | 1 cut(s) | 64 |
| Eco53kI | GAGCTC | 1 cut(s) | 472 |
| Eco91I | GGTNACC | 1 cut(s) | 132 |
| EcoICRI | GAGCTC | 1 cut(s) | 472 |
| EcoO109I | RGGNCCY | 1 cut(s) | 64 |
| EcoO65I | GGTNACC | 1 cut(s) | 132 |
| EcoRII | CCWGG | 3 cut(s) | 60, 69, 108 |
| EcoT14I | CCWWGG | 2 cut(s) | 213, 400 |
| EcoT38I | GRGCYC | 2 cut(s) | 276, 474 |
| ErhI | CCWWGG | 2 cut(s) | 213, 400 |
| FaeI | CATG | 1 cut(s) | 217 |
| FaiI | YATR | 6 cut(s) | 29, 96, 173, 215, 232, 300 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 335, 367 |
| FatI | CATG | 1 cut(s) | 213 |
| Fnu4HI | GCNGC | 2 cut(s) | 429, 532 |
| FokI | GGATG | 2 cut(s) | 428, 530 |
| FriOI | GRGCYC | 2 cut(s) | 276, 474 |
| Fsp4HI | GCNGC | 2 cut(s) | 429, 532 |
| FspBI | CTAG | 1 cut(s) | 239 |
| GluI | GCNGC | 2 cut(s) | 429, 532 |
| GsuI | CTGGAG | 1 cut(s) | 53 |
| HaeIII | GGCC | 3 cut(s) | 74, 534, 564 |
| HapII | CCGG | 4 cut(s) | 137, 334, 432, 613 |
| HgaI | GACGC | 1 cut(s) | 500 |
| Hin1I | GRCGYC | 1 cut(s) | 492 |
| Hin1II | CATG | 1 cut(s) | 217 |
| HinfI | GANTC | 7 cut(s) | 51, 247, 326, 407, 423, 570, 576 |
| HpaII | CCGG | 4 cut(s) | 137, 334, 432, 613 |
| HphI | GGTGA | 4 cut(s) | 271, 323, 386, 446 |
| Hpy166II | GTNNAC | 1 cut(s) | 418 |
| Hpy188I | TCNGA | 3 cut(s) | 50, 556, 575 |
| Hpy188III | TCNNGA | 1 cut(s) | 478 |
| Hpy8I | GTNNAC | 1 cut(s) | 418 |
| Hpy99I | CGWCG | 8 cut(s) | 26, 379, 479, 494, 518, 521, 560, 563 |
| HpyAV | CCTTC | 1 cut(s) | 472 |
| HpyCH4III | ACNGT | 2 cut(s) | 286, 632 |
| HpyCH4IV | ACGT | 2 cut(s) | 263, 513 |
| HpyCH4V | TGCA | 1 cut(s) | 122 |
| HpyF3I | CTNAG | 1 cut(s) | 306 |
| HpySE526I | ACGT | 2 cut(s) | 263, 513 |
| Hsp92I | GRCGYC | 1 cut(s) | 492 |
| Hsp92II | CATG | 1 cut(s) | 217 |
| LmnI | GCTCC | 3 cut(s) | 364, 379, 469 |
| LweI | GCATC | 2 cut(s) | 199, 208 |
| MabI | ACCWGGT | 1 cut(s) | 108 |
| MaeI | CTAG | 1 cut(s) | 239 |
| MaeII | ACGT | 2 cut(s) | 263, 513 |
| MaeIII | GTNAC | 4 cut(s) | 13, 132, 259, 317 |
| MbiI | CCGCTC | 1 cut(s) | 130 |
| MboII | GAAGA | 2 cut(s) | 76, 136 |
| MhlI | GDGCHC | 2 cut(s) | 276, 474 |
| MluCI | AATT | 6 cut(s) | 103, 175, 311, 347, 390, 603 |
| MlyI | GAGTC | 3 cut(s) | 241, 416, 585 |
| MmeI | TCCRAC | 2 cut(s) | 469, 579 |
| MseI | TTAA | 5 cut(s) | 149, 180, 510, 602, 621 |
| MspI | CCGG | 4 cut(s) | 137, 334, 432, 613 |
| MspR9I | CCNGG | 3 cut(s) | 62, 71, 110 |
| MvaI | CCWGG | 3 cut(s) | 62, 71, 110 |
| MvnI | CGCG | 1 cut(s) | 598 |
| NcoI | CCATGG | 1 cut(s) | 213 |
| NlaIII | CATG | 1 cut(s) | 217 |
| NlaIV | GGNNCC | 2 cut(s) | 160, 381 |
| NmuCI | GTSAC | 1 cut(s) | 259 |
| PceI | AGGCCT | 1 cut(s) | 74 |
| PfeI | GAWTC | 4 cut(s) | 51, 326, 423, 570 |
| PinAI | ACCGGT | 1 cut(s) | 333 |
| PkrI | GCNGC | 2 cut(s) | 430, 533 |
| PleI | GAGTC | 3 cut(s) | 241, 415, 584 |
| PpsI | GAGTC | 3 cut(s) | 241, 415, 584 |
| PpuMI | RGGWCCY | 1 cut(s) | 64 |
| Psp124BI | GAGCTC | 1 cut(s) | 474 |
| Psp5II | RGGWCCY | 1 cut(s) | 64 |
| Psp6I | CCWGG | 3 cut(s) | 60, 69, 108 |
| PspEI | GGTNACC | 1 cut(s) | 132 |
| PspGI | CCWGG | 3 cut(s) | 60, 69, 108 |
| PspN4I | GGNNCC | 2 cut(s) | 160, 381 |
| PspPI | GGNCC | 1 cut(s) | 64 |
| PspPPI | RGGWCCY | 1 cut(s) | 64 |
| SacI | GAGCTC | 1 cut(s) | 474 |
| SaqAI | TTAA | 5 cut(s) | 149, 180, 510, 602, 621 |
| SatI | GCNGC | 2 cut(s) | 429, 532 |
| Sau96I | GGNCC | 1 cut(s) | 64 |
| SchI | GAGTC | 3 cut(s) | 241, 416, 585 |
| ScrFI | CCNGG | 3 cut(s) | 62, 71, 110 |
| SduI | GDGCHC | 2 cut(s) | 276, 474 |
| SetI | ASST | 7 cut(s) | 69, 111, 266, 441, 474, 516, 543 |
| SexAI | ACCWGGT | 1 cut(s) | 108 |
| SfaNI | GCATC | 2 cut(s) | 199, 208 |
| SgrAI | CRCCGGYG | 2 cut(s) | 333, 431 |
| SinI | GGWCC | 1 cut(s) | 64 |
| SmlI | CTYRAG | 1 cut(s) | 536 |
| SmoI | CTYRAG | 1 cut(s) | 536 |
| Sse9I | AATT | 6 cut(s) | 103, 175, 311, 347, 390, 603 |
| SseBI | AGGCCT | 1 cut(s) | 74 |
| SsiI | CCGC | 4 cut(s) | 130, 397, 429, 531 |
| SspMI | CTAG | 1 cut(s) | 239 |
| SstI | GAGCTC | 1 cut(s) | 474 |
| StuI | AGGCCT | 1 cut(s) | 74 |
| StyD4I | CCNGG | 3 cut(s) | 60, 69, 108 |
| StyI | CCWWGG | 2 cut(s) | 213, 400 |
| TaaI | ACNGT | 2 cut(s) | 286, 632 |
| TaiI | ACGT | 2 cut(s) | 266, 516 |
| TaqI | TCGA | 2 cut(s) | 477, 489 |
| TaqII | GACCGA | 2 cut(s) | 67, 243 |
| TasI | AATT | 6 cut(s) | 103, 175, 311, 347, 390, 603 |
| TauI | GCSGC | 2 cut(s) | 431, 534 |
| TfiI | GAWTC | 4 cut(s) | 51, 326, 423, 570 |
| Tru1I | TTAA | 5 cut(s) | 149, 180, 510, 602, 621 |
| Tru9I | TTAA | 5 cut(s) | 149, 180, 510, 602, 621 |
| TseFI | GTSAC | 1 cut(s) | 259 |
| Tsp45I | GTSAC | 1 cut(s) | 259 |
| TspDTI | ATGAA | 1 cut(s) | 188 |
| TspGWI | ACGGA | 3 cut(s) | 392, 400, 582 |
| VpaK11BI | GGWCC | 1 cut(s) | 64 |
| XapI | RAATTY | 2 cut(s) | 175, 390 |
| XspI | CTAG | 1 cut(s) | 239 |