Rmu_sc0004569.1_g000004

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004569.1
OG0000093
Physical Location & Seq
Forward (+)
10111 .. 11959
1849 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004569.1_g000004.1.cds

Sequence Viewer

Length: 972 bp
atgggtggctgcaggtgggttgctgctgcagaacgcacgaggacgcgcggggctggggctttgatttgcgcagcaggtgggctggaaaggaggaggctggaagaaggctctagaggtctggccgtacaagaagaaggatctggacaaggccggctgtggggctgcaggaatcggtgctgcagggatcgttccttatgggctggcggggacgaggccggtctagactgtgcaggtgggaggccgcgcgtgatttgggatgaggaggaggtgcagcgcttggcgaggctggagaccagtttgtggctgctgggatctgcgaaggtgagcaatgcacccccacaggattttccccctcaattatctcactctattccgaaattggtttggaactggatttggaaacttcacactatgcccaagatcaaaaacttcttttggcgagctgtttcaaatgcgattgcgacaaaggctaacctcttcaagagacatcttgcacggagccccctctgccccatctgcaattcccagtcagaaacactagagcatgcaatcttctcttacccgtgggcttcggcagtttggtttggccaccctctaagctacaaagtcgacaatgcatccttaacctcctttgatagatggttcaccacctcaatgacaatctgggatatgaacactcttgagtgtggtttggcagcaattgttagagatagctctgggtccatgattaacggagtctctctgctttcctctacccccaccgcaagcgtggtcgaagctctagctttacaactggtgcggcccctatgctcttctctccctcaagatgcacatatcacaacagaatcagatgcactctccttaataaaagcaatcacagatcactctttcctagtagattggcaagtccaaccattagtcggcgacctccgcatctttgcgcaggcctctccttcattcagctggtgttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

323

Amino Acids

35.68

Weight (kDa)

8.31

Isoelectric Point (pI)

45.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000093)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G09490
fragaria_vesca FvH4_1g23791 FvH4_2g01641 FvH4_2g04612 FvH4_2g06831 FvH4_2g07841 FvH4_2g13581 FvH4_2g27220 FvH4_2g30621 FvH4_2g34753 FvH4_3g10392 FvH4_3g24291 FvH4_3g25030 FvH4_3g29361 FvH4_3g31372 FvH4_3g32402 FvH4_3g43651 FvH4_4g03830 FvH4_4g05481 FvH4_4g20431 FvH4_4g21421 FvH4_4g25931 FvH4_5g08801 FvH4_5g21021 FvH4_5g26254 FvH4_5g30931 FvH4_5g31281 FvH4_5g33581 FvH4_5g35622 FvH4_6g02100 FvH4_6g07963 FvH4_6g11620 FvH4_6g16031 FvH4_6g19041 FvH4_6g24211 FvH4_6g24271 FvH4_6g30670 FvH4_6g49540 FvH4_7g25914
malus_domestica MD03G1245200.v1.1 MD04G1168000.v1.1 MD09G1242600.v1.1 MD15G1334000.v1.1 MD17G1165700.v1.1
prunus_persica Prupe.1G073500_v2.0.a1 Prupe.1G283700_v2.0.a1 Prupe.1G524100_v2.0.a1 Prupe.2G022700_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G044300_v2.0.a1 Prupe.2G048800_v2.0.a1 Prupe.2G092000_v2.0.a1 Prupe.2G216500_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.3G103400_v2.0.a1 Prupe.3G143300_v2.0.a1 Prupe.3G190000_v2.0.a1 Prupe.3G219800_v2.0.a1 Prupe.4G177800_v2.0.a1 Prupe.4G261300_v2.0.a1 Prupe.5G044600_v2.0.a1 Prupe.5G067400_v2.0.a1 Prupe.7G083900_v2.0.a1 Prupe.7G120900_v2.0.a1 Prupe.8G032200_v2.0.a1 Prupe.8G036100_v2.0.a1 Prupe.8G042700_v2.0.a1
pyrus_communis pycom01g21710 pycom02g19770 pycom03g05120 pycom05g01370 pycom05g08780 pycom05g10120 pycom07g01370 pycom07g05930 pycom08g15760 pycom08g18090 pycom08g21060 pycom09g03880 pycom10g03870 pycom13g22240 pycom16g05120 pycom16g17170 pycom17g12180 pycom17g16290 pycom17g21230 pycom17g24990 pycom215g00100
rosa_chinensis RchiOBHm_Chr1g0323031 RchiOBHm_Chr1g0324391 RchiOBHm_Chr1g0326401 RchiOBHm_Chr1g0327811 RchiOBHm_Chr1g0332521 RchiOBHm_Chr1g0336501 RchiOBHm_Chr1g0346021 RchiOBHm_Chr1g0347191 RchiOBHm_Chr1g0367181 RchiOBHm_Chr2g0089441 RchiOBHm_Chr2g0115441 RchiOBHm_Chr3g0490691 RchiOBHm_Chr4g0395251 RchiOBHm_Chr4g0398081 RchiOBHm_Chr4g0409451 RchiOBHm_Chr4g0413041 RchiOBHm_Chr4g0415471 RchiOBHm_Chr4g0420961 RchiOBHm_Chr5g0040301 RchiOBHm_Chr5g0070651 RchiOBHm_Chr6g0263011 RchiOBHm_Chr6g0270721 RchiOBHm_Chr6g0277111 RchiOBHm_Chr7g0179771 RchiOBHm_Chr7g0223051 RchiOBHm_Chr7g0225031 RchiOBHm_Chr7g0225091
rosa_laevigata RLG00000001668 RLG00000001672 RLG00000001676 RLG00000007762 RLG00000008994 RLG00000011117 RLG00000013729 RLG00000013839 RLG00000014759 RLG00000016638 RLG00000018535 RLG00000018614 RLG00000018646 RLG00000020679 RLG00000023337 RLG00000029348 RLG00000035891 RLG00000035912
rosa_multiflora Rmu_co8152500.1_g000001 Rmu_co8203314.1_g000001 Rmu_co8383183.1_g000001 Rmu_sc0000293.1_g000033 Rmu_sc0000367.1_g000226 Rmu_sc0000512.1_g000023 Rmu_sc0000594.1_g000059 Rmu_sc0000654.1_g000022 Rmu_sc0000654.1_g000047 Rmu_sc0000706.1_g000037 Rmu_sc0001348.1_g000008 Rmu_sc0001385.1_g000024 Rmu_sc0001405.1_g000002 Rmu_sc0001521.1_g000048 Rmu_sc0001932.1_g000008 Rmu_sc0001932.1_g000009 Rmu_sc0002535.1_g000011 Rmu_sc0002908.1_g000019 Rmu_sc0003709.1_g000004 Rmu_sc0003882.1_g000054 Rmu_sc0004035.1_g000007 Rmu_sc0004041.1_g000007 Rmu_sc0004288.1_g000011 Rmu_sc0004569.1_g000004 Rmu_sc0004677.1_g000016 Rmu_sc0004834.1_g000010 Rmu_sc0005193.1_g000008 Rmu_sc0005354.1_g000009 Rmu_sc0006514.1_g000021 Rmu_sc0006691.1_g000001 Rmu_sc0006888.1_g000021 Rmu_sc0006889.1_g000013 Rmu_sc0008096.1_g000017 Rmu_sc0008378.1_g000003 Rmu_sc0009127.1_g000005 Rmu_sc0009191.1_g000016 Rmu_sc0009687.1_g000018 Rmu_sc0009709.1_g000005 Rmu_sc0009880.1_g000015 Rmu_sc0011710.1_g000001 Rmu_sc0012615.1_g000004 Rmu_sc0016091.1_g000002 Rmu_sc0022339.1_g000006 Rmu_sc0026537.1_g000002 Rmu_sc0027689.1_g000002 Rmu_sc0036222.1_g000001 Rmu_sc0040890.1_g000001 Rmu_ssc0000148.1_g000006 Rmu_ssc0000151.1_g000017 Rmu_ssc0000404.1_g000018 Rmu_ssc0000449.1_g000009
rosa_roxburghii Rroxscaffold_1G00017760 Rroxscaffold_1G00059150 Rroxscaffold_2G00142560 Rroxscaffold_3G00220440 Rroxscaffold_3G00231700 Rroxscaffold_3G00232400 Rroxscaffold_3G00274510 Rroxscaffold_4G00288790 Rroxscaffold_4G00305680 Rroxscaffold_4G00314880 Rroxscaffold_4G00314900 Rroxscaffold_5G00334590 Rroxscaffold_6G00394110 Rroxscaffold_6G00415860 Rroxscaffold_7G00168240 Rroxscaffold_7G00204400 Rroxscaffold_7G00207840
rosa_rugosa Rorug01G0034900 Rorug02G0079500 Rorug02G0229000 Rorug02G0229100 Rorug02G0291400 Rorug02G0298800 Rorug03G0046400 Rorug03G0064700 Rorug03G0077300 Rorug03G0199000 Rorug03G0200400 Rorug04G0205200 Rorug05G0025400 Rorug05G0127400 Rorug05G0192100 Rorug05G0453400 Rorug05G0538300 Rorug06G0035200 Rorug06G0241000 Rorug06G0268300 Rorug07G0120300 Rorug07G0145000 Rorug07G0209100 Rorug07G0240500 Rorug07G0271700
rosa_samantha Rh1AG179100 Rh1BG106900 Rh1BG163400 Rh1BG163500 Rh1BG323500 Rh2CG447900 Rh2DG503700 Rh3AG293600 Rh3CG229100 Rh3DG221500 Rh4AG106000 Rh4BG267700 Rh4CG062500 Rh4CG090100 Rh4CG114800 Rh5AG038400 Rh5BG395400 Rh5CG441700 Rh5CG572000 Rh6AG222400 Rh6AG264500 Rh6BG137400 Rh6BG225700 Rh6CG144300 Rh6DG087600 Rh6DG096000 Rh6DG362400 Rh6DG390200 Rh7AG207500 Rh7AG324700 Rh7AG388800 Rh7AG437100 Rh7BG019000 Rh7BG374600 Rh7CG028700 Rh7CG341500 Rh7CG408000 Rh7CG408300 Rh7DG354600
rosa_wichuraiana Rw0G009630 Rw0G012170 Rw4G022700 Rw5G028420 Rw5G029490 Rw6G007220 Rw6G007410 Rw6G017880 Rw7G012440 Rw7G021830 Rw7G027490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 3, 65, 221
Acc16I TGCGCA 2 cut(s) 70, 942
Acc36I ACCTGC 3 cut(s) 3, 65, 221
AccB7I CCANNNNNTGG 1 cut(s) 300
AccI GTMKAC 1 cut(s) 609
AccII CGCG 4 cut(s) 46, 48, 244, 246
AciI CCGC 6 cut(s) 48, 204, 242, 762, 799, 931
AclWI GGATC 3 cut(s) 145, 192, 319
AcoI YGGCCR 2 cut(s) 120, 586
AfaI GTAC 1 cut(s) 126
AfeI AGCGCT 1 cut(s) 275
AfiI CCNNNNNNNGG 3 cut(s) 157, 300, 920
AgsI TTSAA 2 cut(s) 450, 481
AluBI AGCT 6 cut(s) 443, 600, 714, 779, 785, 963
AluI AGCT 6 cut(s) 443, 600, 714, 779, 785, 963
Alw26I GTCTC 3 cut(s) 284, 478, 742
AlwI GGATC 3 cut(s) 145, 192, 319
Aor51HI AGCGCT 1 cut(s) 275
AoxI GGCC 7 cut(s) 120, 148, 213, 239, 586, 800, 945
ApeKI GCWGC 9 cut(s) 9, 23, 26, 71, 162, 177, 271, 304, 695
AspLEI GCGC 5 cut(s) 48, 71, 246, 276, 943
AspS9I GGNCC 2 cut(s) 720, 801
AsuHPI GGTGA 2 cut(s) 334, 637
AvaII GGWCC 1 cut(s) 720
BalI TGGCCA 1 cut(s) 588
BanII GRGCYC 1 cut(s) 503
BauI CACGAG 1 cut(s) 37
BbvI GCAGC 8 cut(s) 10, 13, 83, 149, 164, 283, 291, 707
BccI CCATC 2 cut(s) 521, 633
BceAI ACGGC 1 cut(s) 107
BcoDI GTCTC 3 cut(s) 284, 478, 742
BfaI CTAG 5 cut(s) 111, 221, 539, 782, 893
BfmI CTRYAG 4 cut(s) 10, 27, 163, 178
BfoI RGCGCY 1 cut(s) 277
BfuAI ACCTGC 3 cut(s) 3, 65, 221
Bme18I GGWCC 1 cut(s) 720
BmgT120I GGNCC 2 cut(s) 720, 801
BmiI GGNNCC 3 cut(s) 500, 721, 803
BmrI ACTGGG 1 cut(s) 520
BmsI GCATC 4 cut(s) 626, 817, 841, 942
BmuI ACTGGG 1 cut(s) 520
BpmI CTGGAG 1 cut(s) 308
BpuEI CTTGAG 2 cut(s) 701, 807
BsaI GGTCTC 1 cut(s) 284
BsaJI CCNNGG 1 cut(s) 563
Bsc4I CCNNNNNNNGG 3 cut(s) 157, 300, 920
Bse118I RCCGGY 2 cut(s) 150, 215
Bse1I ACTGG 4 cut(s) 294, 395, 526, 798
Bse3DI GCAATG 1 cut(s) 334
BseDI CCNNGG 1 cut(s) 563
BseGI GGATG 2 cut(s) 262, 617
BseLI CCNNNNNNNGG 3 cut(s) 157, 300, 920
BseMI GCAATG 1 cut(s) 334
BseNI ACTGG 4 cut(s) 294, 395, 526, 798
BseRI GAGGAG 3 cut(s) 106, 275, 278
BseXI GCAGC 8 cut(s) 10, 13, 83, 149, 164, 283, 291, 707
BseYI CCCAGC 2 cut(s) 53, 307
BsgI GTGCAG 2 cut(s) 249, 290
Bsh1236I CGCG 4 cut(s) 46, 48, 244, 246
BshFI GGCC 7 cut(s) 122, 150, 215, 241, 588, 802, 947
BsiSI CCGG 2 cut(s) 151, 216
BslFI GGGAC 1 cut(s) 221
BslI CCNNNNNNNGG 3 cut(s) 157, 300, 920
BsmAI GTCTC 3 cut(s) 284, 478, 742
BsmFI GGGAC 1 cut(s) 221
BsnI GGCC 7 cut(s) 122, 150, 215, 241, 588, 802, 947
Bso31I GGTCTC 1 cut(s) 284
Bsp1286I GDGCHC 1 cut(s) 503
Bsp143I GATC 5 cut(s) 137, 184, 311, 420, 880
BspACI CCGC 6 cut(s) 48, 204, 242, 762, 799, 931
BspANI GGCC 7 cut(s) 122, 150, 215, 241, 588, 802, 947
BspFNI CGCG 4 cut(s) 46, 48, 244, 246
BspLI GGNNCC 3 cut(s) 500, 721, 803
BspMAI CTGCAG 4 cut(s) 14, 31, 167, 182
BspMI ACCTGC 3 cut(s) 3, 65, 221
BspPI GGATC 3 cut(s) 145, 192, 319
BspQI GCTCTTC 1 cut(s) 817
BspTNI GGTCTC 1 cut(s) 284
BsrDI GCAATG 1 cut(s) 334
BsrFI RCCGGY 2 cut(s) 150, 215
BsrI ACTGG 4 cut(s) 294, 395, 526, 798
BssAI RCCGGY 2 cut(s) 150, 215
BssECI CCNNGG 1 cut(s) 563
BssMI GATC 5 cut(s) 137, 184, 311, 420, 880
BssSI CACGAG 1 cut(s) 37
Bst2BI CACGAG 1 cut(s) 37
Bst4CI ACNGT 1 cut(s) 227
Bst6I CTCTTC 2 cut(s) 482, 817
BstC8I GCNNGC 6 cut(s) 152, 202, 441, 546, 766, 945
BstDEI CTNAG 1 cut(s) 596
BstDSI CCRYGG 1 cut(s) 563
BstF5I GGATG 2 cut(s) 262, 617
BstFNI CGCG 4 cut(s) 46, 48, 244, 246
BstH2I RGCGCY 1 cut(s) 277
BstHHI GCGC 5 cut(s) 48, 71, 246, 276, 943
BstKTI GATC 5 cut(s) 140, 187, 314, 423, 883
BstMAI GTCTC 3 cut(s) 284, 478, 742
BstMBI GATC 5 cut(s) 137, 184, 311, 420, 880
BstMWI GCNNNNNNNGC 4 cut(s) 467, 507, 516, 930
BstNSI RCATGY 1 cut(s) 548
BstSFI CTRYAG 4 cut(s) 10, 27, 163, 178
BstUI CGCG 4 cut(s) 46, 48, 244, 246
BstV1I GCAGC 8 cut(s) 10, 13, 83, 149, 164, 283, 291, 707
BstX2I RGATCY 2 cut(s) 137, 311
BstYI RGATCY 2 cut(s) 137, 311
BsuRI GGCC 7 cut(s) 122, 150, 215, 241, 588, 802, 947
BtgI CCRYGG 1 cut(s) 563
BtsCI GGATG 2 cut(s) 262, 617
BveI ACCTGC 3 cut(s) 3, 65, 221
Cac8I GCNNGC 6 cut(s) 152, 202, 441, 546, 766, 945
CfoI GCGC 5 cut(s) 48, 71, 246, 276, 943
Cfr10I RCCGGY 2 cut(s) 150, 215
Cfr13I GGNCC 2 cut(s) 720, 801
CseI GACGC 1 cut(s) 52
Csp6I GTAC 1 cut(s) 125
CviAII CATG 2 cut(s) 545, 724
CviQI GTAC 1 cut(s) 125
DdeI CTNAG 1 cut(s) 596
DpnI GATC 5 cut(s) 139, 186, 313, 422, 882
DpnII GATC 5 cut(s) 137, 184, 311, 420, 880
EaeI YGGCCR 2 cut(s) 120, 586
Eam1104I CTCTTC 2 cut(s) 482, 817
EarI CTCTTC 2 cut(s) 482, 817
Eco147I AGGCCT 1 cut(s) 947
Eco24I GRGCYC 1 cut(s) 503
Eco31I GGTCTC 1 cut(s) 284
Eco47I GGWCC 1 cut(s) 720
Eco47III AGCGCT 1 cut(s) 275
EcoT22I ATGCAT 1 cut(s) 619
EcoT38I GRGCYC 1 cut(s) 503
FaeI CATG 2 cut(s) 548, 727
FaiI YATR 7 cut(s) 196, 413, 546, 671, 725, 808, 834
FaqI GGGAC 1 cut(s) 221
FatI CATG 2 cut(s) 544, 723
FauI CCCGC 2 cut(s) 41, 197
FblI GTMKAC 1 cut(s) 609
FokI GGATG 2 cut(s) 269, 604
FriOI GRGCYC 1 cut(s) 503
FspBI CTAG 5 cut(s) 111, 221, 539, 782, 893
FspI TGCGCA 2 cut(s) 70, 942
GlaI GCGC 5 cut(s) 47, 70, 245, 275, 942
GsaI CCCAGC 2 cut(s) 57, 311
GsuI CTGGAG 1 cut(s) 308
HaeII RGCGCY 1 cut(s) 277
HaeIII GGCC 7 cut(s) 122, 150, 215, 241, 588, 802, 947
HapII CCGG 2 cut(s) 151, 216
HgaI GACGC 1 cut(s) 52
HhaI GCGC 5 cut(s) 48, 71, 246, 276, 943
Hin1II CATG 2 cut(s) 548, 727
Hin6I GCGC 5 cut(s) 46, 69, 244, 274, 941
HinP1I GCGC 5 cut(s) 46, 69, 244, 274, 941
HincII GTYRAC 1 cut(s) 610
HindII GTYRAC 1 cut(s) 610
HinfI GANTC 3 cut(s) 169, 735, 845
HpaII CCGG 2 cut(s) 151, 216
HphI GGTGA 2 cut(s) 334, 637
Hpy166II GTNNAC 2 cut(s) 610, 645
Hpy188I TCNGA 3 cut(s) 375, 532, 850
Hpy188III TCNNGA 6 cut(s) 111, 141, 221, 481, 680, 824
Hpy8I GTNNAC 2 cut(s) 610, 645
HpyAV CCTTC 4 cut(s) 98, 128, 313, 963
HpyCH4III ACNGT 1 cut(s) 227
HpyF10VI GCNNNNNNNGC 4 cut(s) 467, 507, 516, 930
HpyF3I CTNAG 1 cut(s) 596
Hsp92II CATG 2 cut(s) 548, 727
HspAI GCGC 5 cut(s) 46, 69, 244, 274, 941
KroI GCCGGC 1 cut(s) 150
KroNI GCCGGC 1 cut(s) 152
Kzo9I GATC 5 cut(s) 137, 184, 311, 420, 880
LguI GCTCTTC 1 cut(s) 817
LmnI GCTCC 1 cut(s) 498
Lsp1109I GCAGC 8 cut(s) 10, 13, 83, 149, 164, 283, 291, 707
LweI GCATC 4 cut(s) 626, 817, 841, 942
MaeI CTAG 5 cut(s) 111, 221, 539, 782, 893
MalI GATC 5 cut(s) 139, 186, 313, 422, 882
MboI GATC 5 cut(s) 137, 184, 311, 420, 880
MboII GAAGA 5 cut(s) 113, 143, 469, 544, 804
MfeI CAATTG 1 cut(s) 699
MflI RGATCY 2 cut(s) 137, 311
MhlI GDGCHC 1 cut(s) 503
MlsI TGGCCA 1 cut(s) 588
MluCI AATT 4 cut(s) 356, 377, 520, 699
MluNI TGGCCA 1 cut(s) 588
MlyI GAGTC 1 cut(s) 744
MmeI TCCRAC 1 cut(s) 934
Mox20I TGGCCA 1 cut(s) 588
Mph1103I ATGCAT 1 cut(s) 619
MroNI GCCGGC 1 cut(s) 150
MscI TGGCCA 1 cut(s) 588
MseI TTAA 3 cut(s) 623, 729, 863
MslI CAYNNNNRTG 1 cut(s) 653
Msp20I TGGCCA 1 cut(s) 588
MspA1I CMGCKG 1 cut(s) 963
MspI CCGG 2 cut(s) 151, 216
MunI CAATTG 1 cut(s) 699
MvnI CGCG 4 cut(s) 46, 48, 244, 246
MwoI GCNNNNNNNGC 4 cut(s) 467, 507, 516, 930
NaeI GCCGGC 1 cut(s) 152
NdeII GATC 5 cut(s) 137, 184, 311, 420, 880
NgoMIV GCCGGC 1 cut(s) 150
NlaIII CATG 2 cut(s) 548, 727
NlaIV GGNNCC 3 cut(s) 500, 721, 803
NsbI TGCGCA 2 cut(s) 70, 942
NsiI ATGCAT 1 cut(s) 619
NspI RCATGY 1 cut(s) 548
PaeI GCATGC 1 cut(s) 548
PaqCI CACCTGC 3 cut(s) 3, 65, 221
PceI AGGCCT 1 cut(s) 947
PciSI GCTCTTC 1 cut(s) 817
PdiI GCCGGC 1 cut(s) 152
PfeI GAWTC 2 cut(s) 169, 845
PflMI CCANNNNNTGG 1 cut(s) 300
PleI GAGTC 1 cut(s) 743
PpsI GAGTC 1 cut(s) 743
PspFI CCCAGC 2 cut(s) 53, 307
PspN4I GGNNCC 3 cut(s) 500, 721, 803
PspPI GGNCC 2 cut(s) 720, 801
PstI CTGCAG 4 cut(s) 14, 31, 167, 182
PsuI RGATCY 2 cut(s) 137, 311
PvuII CAGCTG 1 cut(s) 963
RsaI GTAC 1 cut(s) 126
RsaNI GTAC 1 cut(s) 125
RseI CAYNNNNRTG 1 cut(s) 653
SalI GTCGAC 1 cut(s) 608
SapI GCTCTTC 1 cut(s) 817
SaqAI TTAA 3 cut(s) 623, 729, 863
Sau3AI GATC 5 cut(s) 137, 184, 311, 420, 880
Sau96I GGNCC 2 cut(s) 720, 801
SchI GAGTC 1 cut(s) 744
SduI GDGCHC 1 cut(s) 503
SfaNI GCATC 4 cut(s) 626, 817, 841, 942
SfcI CTRYAG 4 cut(s) 10, 27, 163, 178
SinI GGWCC 1 cut(s) 720
SmiMI CAYNNNNRTG 1 cut(s) 653
SmlI CTYRAG 2 cut(s) 680, 822
SmoI CTYRAG 2 cut(s) 680, 822
SphI GCATGC 1 cut(s) 548
Sse9I AATT 4 cut(s) 356, 377, 520, 699
SseBI AGGCCT 1 cut(s) 947
SsiI CCGC 6 cut(s) 48, 204, 242, 762, 799, 931
SspMI CTAG 5 cut(s) 111, 221, 539, 782, 893
StuI AGGCCT 1 cut(s) 947
TaaI ACNGT 1 cut(s) 227
TaqI TCGA 2 cut(s) 609, 774
TasI AATT 4 cut(s) 356, 377, 520, 699
TauI GCSGC 2 cut(s) 244, 802
TfiI GAWTC 2 cut(s) 169, 845
Tru1I TTAA 3 cut(s) 623, 729, 863
Tru9I TTAA 3 cut(s) 623, 729, 863
TseI GCWGC 9 cut(s) 9, 23, 26, 71, 162, 177, 271, 304, 695
TspDTI ATGAA 2 cut(s) 686, 945
TspGWI ACGGA 2 cut(s) 511, 747
Van91I CCANNNNNTGG 1 cut(s) 300
VpaK11BI GGWCC 1 cut(s) 720
XbaI TCTAGA 2 cut(s) 110, 220
XceI RCATGY 1 cut(s) 548
XcmI CCANNNNNNNNNTGG 1 cut(s) 766
XmiI GTMKAC 1 cut(s) 609
XspI CTAG 5 cut(s) 111, 221, 539, 782, 893
Zsp2I ATGCAT 1 cut(s) 619
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.