FvH4_2g34753

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000093
Physical Location & Seq
Reverse (-)
25738657 .. 25739959
1303 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g34753.t1

Sequence Viewer

Length: 1059 bp
ATGGTGTTCCGGCCTTTCTTGGAGGAAAATGATATTGTGACAATCAAGGCTATTCCAATTGGAAGTGCAACTTATGATGACTTGTTGGTGTGGCCTCATACAAAGTCTCGGAATTACTCGGTAAAAAGTGGCTATCATAAATTGTTTGCAAGCCAGGGGAAGTCGGGCACATGTATGCCTTCCTCTTCCCATTCTTTTGATATCAGAATTTGGAAGTTGATTTGGAGGCCAAATATGGCTCCTAAGGTGGCTAACTTCATGTGGAGAGCTTTGTCGAACGCCCTGCCTTCCTTGTGGAGCCTCTTCAGAAGGAAAATAGTGAAAACCCCAATTTATGCTATTTGTGGTGATCAGCCAGAGACCATTGAGCATTGCCTGTTACACTGCCCTTGGACTTTAGCTGTGTGGTTTGGGTGCTCTCTGGGTTACACTCCTGATAGGGGGAAAATTTCTCATCTTGAGGAATGTTGGAGATCCATAAGAATGCTGCTATGTTTCCGTGTGAAAAAGAGGATGTTCTTAATTTTGTCTTCTTCTCAGTTAATTTCAAGAGCTCCTACTCTGTGGACTCCACCTCCTGTTGATGTAGTAAAGATCAACTTTGATGGTGCTTGGAAGGAGTCAAATCTTAATAGTGGAGTGGGAGTAATAATTCGCAGCCATATGGGTTTGTCTATTGCTGGAGCTAGTCTTTTTCGTTCCCACAACTCAACGGTTGAGGCTGAAGCTGAGGCTCTCTTATATGGTTTCCGAATGGCTGTGGTGTTGAAGCTGGAAAAGATAATTATTGAAGGGGATTGTCAGGAAGTGATCAAGGCATTAAGTGACTCTTCTTTCTCTCCTAGCCGGAGAATCTCCCCAATCCTAAAGAAGGTTGCTCACTTGGTTCCATTTTTTAGAAGTATTCATTGGAACTGGGTTCCACGAGAAGCCAACCGCCTTGCAAACGCAGCGGCCAAGCTTGCTATTCAGAGTTTGTGCTCTCAGGAATGGGCTAACAGGCCCCCAAACTCTTTGATTTCAGTTTTAAGGAATGATGGATTACCTGCCCCTCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_3 zf-RVT

Protein Analysis

353

Amino Acids

39.72

Weight (kDa)

9.68

Isoelectric Point (pI)

49.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RVT PF13966 39 - 136 1e-15 zinc-binding in reverse transcriptase
RVT_3 PF13456 200 - 322 5e-27 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000093)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G09490
fragaria_vesca FvH4_1g23791 FvH4_2g01641 FvH4_2g04612 FvH4_2g06831 FvH4_2g07841 FvH4_2g13581 FvH4_2g27220 FvH4_2g30621 FvH4_2g34753 FvH4_3g10392 FvH4_3g24291 FvH4_3g25030 FvH4_3g29361 FvH4_3g31372 FvH4_3g32402 FvH4_3g43651 FvH4_4g03830 FvH4_4g05481 FvH4_4g20431 FvH4_4g21421 FvH4_4g25931 FvH4_5g08801 FvH4_5g21021 FvH4_5g26254 FvH4_5g30931 FvH4_5g31281 FvH4_5g33581 FvH4_5g35622 FvH4_6g02100 FvH4_6g07963 FvH4_6g11620 FvH4_6g16031 FvH4_6g19041 FvH4_6g24211 FvH4_6g24271 FvH4_6g30670 FvH4_6g49540 FvH4_7g25914
malus_domestica MD03G1245200.v1.1 MD04G1168000.v1.1 MD09G1242600.v1.1 MD15G1334000.v1.1 MD17G1165700.v1.1
prunus_persica Prupe.1G073500_v2.0.a1 Prupe.1G283700_v2.0.a1 Prupe.1G524100_v2.0.a1 Prupe.2G022700_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G044300_v2.0.a1 Prupe.2G048800_v2.0.a1 Prupe.2G092000_v2.0.a1 Prupe.2G216500_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.3G103400_v2.0.a1 Prupe.3G143300_v2.0.a1 Prupe.3G190000_v2.0.a1 Prupe.3G219800_v2.0.a1 Prupe.4G177800_v2.0.a1 Prupe.4G261300_v2.0.a1 Prupe.5G044600_v2.0.a1 Prupe.5G067400_v2.0.a1 Prupe.7G083900_v2.0.a1 Prupe.7G120900_v2.0.a1 Prupe.8G032200_v2.0.a1 Prupe.8G036100_v2.0.a1 Prupe.8G042700_v2.0.a1
pyrus_communis pycom01g21710 pycom02g19770 pycom03g05120 pycom05g01370 pycom05g08780 pycom05g10120 pycom07g01370 pycom07g05930 pycom08g15760 pycom08g18090 pycom08g21060 pycom09g03880 pycom10g03870 pycom13g22240 pycom16g05120 pycom16g17170 pycom17g12180 pycom17g16290 pycom17g21230 pycom17g24990 pycom215g00100
rosa_chinensis RchiOBHm_Chr1g0323031 RchiOBHm_Chr1g0324391 RchiOBHm_Chr1g0326401 RchiOBHm_Chr1g0327811 RchiOBHm_Chr1g0332521 RchiOBHm_Chr1g0336501 RchiOBHm_Chr1g0346021 RchiOBHm_Chr1g0347191 RchiOBHm_Chr1g0367181 RchiOBHm_Chr2g0089441 RchiOBHm_Chr2g0115441 RchiOBHm_Chr3g0490691 RchiOBHm_Chr4g0395251 RchiOBHm_Chr4g0398081 RchiOBHm_Chr4g0409451 RchiOBHm_Chr4g0413041 RchiOBHm_Chr4g0415471 RchiOBHm_Chr4g0420961 RchiOBHm_Chr5g0040301 RchiOBHm_Chr5g0070651 RchiOBHm_Chr6g0263011 RchiOBHm_Chr6g0270721 RchiOBHm_Chr6g0277111 RchiOBHm_Chr7g0179771 RchiOBHm_Chr7g0223051 RchiOBHm_Chr7g0225031 RchiOBHm_Chr7g0225091
rosa_laevigata RLG00000001668 RLG00000001672 RLG00000001676 RLG00000007762 RLG00000008994 RLG00000011117 RLG00000013729 RLG00000013839 RLG00000014759 RLG00000016638 RLG00000018535 RLG00000018614 RLG00000018646 RLG00000020679 RLG00000023337 RLG00000029348 RLG00000035891 RLG00000035912
rosa_multiflora Rmu_co8152500.1_g000001 Rmu_co8203314.1_g000001 Rmu_co8383183.1_g000001 Rmu_sc0000293.1_g000033 Rmu_sc0000367.1_g000226 Rmu_sc0000512.1_g000023 Rmu_sc0000594.1_g000059 Rmu_sc0000654.1_g000022 Rmu_sc0000654.1_g000047 Rmu_sc0000706.1_g000037 Rmu_sc0001348.1_g000008 Rmu_sc0001385.1_g000024 Rmu_sc0001405.1_g000002 Rmu_sc0001521.1_g000048 Rmu_sc0001932.1_g000008 Rmu_sc0001932.1_g000009 Rmu_sc0002535.1_g000011 Rmu_sc0002908.1_g000019 Rmu_sc0003709.1_g000004 Rmu_sc0003882.1_g000054 Rmu_sc0004035.1_g000007 Rmu_sc0004041.1_g000007 Rmu_sc0004288.1_g000011 Rmu_sc0004569.1_g000004 Rmu_sc0004677.1_g000016 Rmu_sc0004834.1_g000010 Rmu_sc0005193.1_g000008 Rmu_sc0005354.1_g000009 Rmu_sc0006514.1_g000021 Rmu_sc0006691.1_g000001 Rmu_sc0006888.1_g000021 Rmu_sc0006889.1_g000013 Rmu_sc0008096.1_g000017 Rmu_sc0008378.1_g000003 Rmu_sc0009127.1_g000005 Rmu_sc0009191.1_g000016 Rmu_sc0009687.1_g000018 Rmu_sc0009709.1_g000005 Rmu_sc0009880.1_g000015 Rmu_sc0011710.1_g000001 Rmu_sc0012615.1_g000004 Rmu_sc0016091.1_g000002 Rmu_sc0022339.1_g000006 Rmu_sc0026537.1_g000002 Rmu_sc0027689.1_g000002 Rmu_sc0036222.1_g000001 Rmu_sc0040890.1_g000001 Rmu_ssc0000148.1_g000006 Rmu_ssc0000151.1_g000017 Rmu_ssc0000404.1_g000018 Rmu_ssc0000449.1_g000009
rosa_roxburghii Rroxscaffold_1G00017760 Rroxscaffold_1G00059150 Rroxscaffold_2G00142560 Rroxscaffold_3G00220440 Rroxscaffold_3G00231700 Rroxscaffold_3G00232400 Rroxscaffold_3G00274510 Rroxscaffold_4G00288790 Rroxscaffold_4G00305680 Rroxscaffold_4G00314880 Rroxscaffold_4G00314900 Rroxscaffold_5G00334590 Rroxscaffold_6G00394110 Rroxscaffold_6G00415860 Rroxscaffold_7G00168240 Rroxscaffold_7G00204400 Rroxscaffold_7G00207840
rosa_rugosa Rorug01G0034900 Rorug02G0079500 Rorug02G0229000 Rorug02G0229100 Rorug02G0291400 Rorug02G0298800 Rorug03G0046400 Rorug03G0064700 Rorug03G0077300 Rorug03G0199000 Rorug03G0200400 Rorug04G0205200 Rorug05G0025400 Rorug05G0127400 Rorug05G0192100 Rorug05G0453400 Rorug05G0538300 Rorug06G0035200 Rorug06G0241000 Rorug06G0268300 Rorug07G0120300 Rorug07G0145000 Rorug07G0209100 Rorug07G0240500 Rorug07G0271700
rosa_samantha Rh1AG179100 Rh1BG106900 Rh1BG163400 Rh1BG163500 Rh1BG323500 Rh2CG447900 Rh2DG503700 Rh3AG293600 Rh3CG229100 Rh3DG221500 Rh4AG106000 Rh4BG267700 Rh4CG062500 Rh4CG090100 Rh4CG114800 Rh5AG038400 Rh5BG395400 Rh5CG441700 Rh5CG572000 Rh6AG222400 Rh6AG264500 Rh6BG137400 Rh6BG225700 Rh6CG144300 Rh6DG087600 Rh6DG096000 Rh6DG362400 Rh6DG390200 Rh7AG207500 Rh7AG324700 Rh7AG388800 Rh7AG437100 Rh7BG019000 Rh7BG374600 Rh7CG028700 Rh7CG341500 Rh7CG408000 Rh7CG408300 Rh7DG354600
rosa_wichuraiana Rw0G009630 Rw0G012170 Rw4G022700 Rw5G028420 Rw5G029490 Rw6G007220 Rw6G007410 Rw6G017880 Rw7G012440 Rw7G021830 Rw7G027490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1054
AciI CCGC 2 cut(s) 937, 953
AclWI GGATC 1 cut(s) 468
AcoI YGGCCR 1 cut(s) 954
AcsI RAATTY 2 cut(s) 207, 447
AcuI CTGAAG 2 cut(s) 289, 744
AfiI CCNNNNNNNGG 2 cut(s) 440, 871
AflIII ACRYGT 1 cut(s) 170
AgsI TTSAA 3 cut(s) 549, 769, 791
AjnI CCWGG 1 cut(s) 153
AjuI GAANNNNNNNTTGG 2 cut(s) 892, 924
AluBI AGCT 7 cut(s) 269, 401, 554, 686, 728, 772, 961
AluI AGCT 7 cut(s) 269, 401, 554, 686, 728, 772, 961
Alw21I GWGCWC 3 cut(s) 419, 556, 983
Alw26I GTCTC 2 cut(s) 111, 353
AlwI GGATC 1 cut(s) 468
AoxI GGCC 5 cut(s) 11, 92, 227, 954, 1001
ApeKI GCWGC 3 cut(s) 487, 657, 950
ApoI RAATTY 2 cut(s) 207, 447
AspS9I GGNCC 1 cut(s) 1002
AsuHPI GGTGA 1 cut(s) 359
AxyI CCTNAGG 1 cut(s) 243
BaeGI GKGCMC 1 cut(s) 170
BanII GRGCYC 1 cut(s) 556
BauI CACGAG 1 cut(s) 924
BbsI GAAGAC 1 cut(s) 522
Bbv12I GWGCWC 3 cut(s) 419, 556, 983
BbvCI CCTCAGC 1 cut(s) 729
BbvI GCAGC 3 cut(s) 474, 669, 962
BccI CCATC 2 cut(s) 599, 1031
BcgI CGANNNNNNTGC 2 cut(s) 265, 299
BciT130I CCWGG 1 cut(s) 155
BclI TGATCA 2 cut(s) 349, 810
BcoDI GTCTC 2 cut(s) 111, 353
BfaI CTAG 2 cut(s) 687, 843
BfuAI ACCTGC 1 cut(s) 1054
BisI GCNGC 4 cut(s) 488, 658, 951, 954
BlsI GCNGC 4 cut(s) 489, 659, 952, 955
Bme1390I CCNGG 1 cut(s) 155
BmgT120I GGNCC 1 cut(s) 1002
BmiI GGNNCC 5 cut(s) 240, 299, 888, 921, 1004
BmrFI CCNGG 1 cut(s) 155
BmrI ACTGGG 1 cut(s) 925
BmuI ACTGGG 1 cut(s) 925
BpiI GAAGAC 1 cut(s) 522
BpmI CTGGAG 1 cut(s) 702
Bpu10I CCTNAGC 1 cut(s) 729
BpuEI CTTGAG 1 cut(s) 479
BsaI GGTCTC 1 cut(s) 353
BsaJI CCNNGG 2 cut(s) 154, 389
BsaXI ACNNNNNCTCC 4 cut(s) 559, 589, 630, 660
Bsc4I CCNNNNNNNGG 2 cut(s) 440, 871
Bse1I ACTGG 1 cut(s) 920
Bse21I CCTNAGG 1 cut(s) 243
Bse3DI GCAATG 1 cut(s) 370
BseBI CCWGG 1 cut(s) 155
BseDI CCNNGG 2 cut(s) 154, 389
BseGI GGATG 1 cut(s) 519
BseLI CCNNNNNNNGG 2 cut(s) 440, 871
BseMI GCAATG 1 cut(s) 370
BseMII CTCAG 3 cut(s) 551, 720, 998
BseNI ACTGG 1 cut(s) 920
BseSI GKGCMC 1 cut(s) 170
BseXI GCAGC 3 cut(s) 474, 669, 962
BshFI GGCC 5 cut(s) 13, 94, 229, 956, 1003
BsiHKAI GWGCWC 3 cut(s) 419, 556, 983
BsiSI CCGG 2 cut(s) 10, 847
BslI CCNNNNNNNGG 2 cut(s) 440, 871
BsmAI GTCTC 2 cut(s) 111, 353
BsmI GAATGC 1 cut(s) 489
BsnI GGCC 5 cut(s) 13, 94, 229, 956, 1003
Bso31I GGTCTC 1 cut(s) 353
Bsp1286I GDGCHC 4 cut(s) 170, 419, 556, 983
Bsp143I GATC 4 cut(s) 349, 473, 594, 810
BspACI CCGC 2 cut(s) 937, 953
BspANI GGCC 5 cut(s) 13, 94, 229, 956, 1003
BspCNI CTCAG 3 cut(s) 550, 721, 997
BspLI GGNNCC 5 cut(s) 240, 299, 888, 921, 1004
BspMI ACCTGC 1 cut(s) 1054
BspPI GGATC 1 cut(s) 468
BspTNI GGTCTC 1 cut(s) 353
BsrDI GCAATG 1 cut(s) 370
BsrI ACTGG 1 cut(s) 920
BssECI CCNNGG 2 cut(s) 154, 389
BssMI GATC 4 cut(s) 349, 473, 594, 810
BssSI CACGAG 1 cut(s) 924
BssT1I CCWWGG 1 cut(s) 389
Bst2BI CACGAG 1 cut(s) 924
Bst2UI CCWGG 1 cut(s) 155
Bst4CI ACNGT 1 cut(s) 715
Bst6I CTCTTC 3 cut(s) 190, 308, 835
BstC8I GCNNGC 2 cut(s) 151, 963
BstDEI CTNAG 4 cut(s) 243, 537, 729, 984
BstENI CCTNNNNNAGG 1 cut(s) 869
BstF5I GGATG 1 cut(s) 519
BstKTI GATC 4 cut(s) 352, 476, 597, 813
BstMAI GTCTC 2 cut(s) 111, 353
BstMBI GATC 4 cut(s) 349, 473, 594, 810
BstMWI GCNNNNNNNGC 2 cut(s) 950, 962
BstNI CCWGG 1 cut(s) 155
BstNSI RCATGY 1 cut(s) 174
BstSCI CCNGG 1 cut(s) 153
BstSLI GKGCMC 1 cut(s) 170
BstV1I GCAGC 3 cut(s) 474, 669, 962
BstV2I GAAGAC 1 cut(s) 522
BstX2I RGATCY 1 cut(s) 473
BstYI RGATCY 1 cut(s) 473
Bsu36I CCTNAGG 1 cut(s) 243
BsuRI GGCC 5 cut(s) 13, 94, 229, 956, 1003
BtsCI GGATG 1 cut(s) 519
BtsI GCAGTG 1 cut(s) 382
BtsIMutI CAGTG 1 cut(s) 382
BveI ACCTGC 1 cut(s) 1054
Cac8I GCNNGC 2 cut(s) 151, 963
Cfr13I GGNCC 1 cut(s) 1002
CviAII CATG 2 cut(s) 171, 259
DdeI CTNAG 4 cut(s) 243, 537, 729, 984
DpnI GATC 4 cut(s) 351, 475, 596, 812
DpnII GATC 4 cut(s) 349, 473, 594, 810
EaeI YGGCCR 1 cut(s) 954
Eam1104I CTCTTC 3 cut(s) 190, 308, 835
EarI CTCTTC 3 cut(s) 190, 308, 835
Ecl136II GAGCTC 1 cut(s) 554
Eco130I CCWWGG 1 cut(s) 389
Eco24I GRGCYC 1 cut(s) 556
Eco31I GGTCTC 1 cut(s) 353
Eco32I GATATC 1 cut(s) 202
Eco53kI GAGCTC 1 cut(s) 554
Eco57I CTGAAG 2 cut(s) 289, 744
Eco81I CCTNAGG 1 cut(s) 243
EcoICRI GAGCTC 1 cut(s) 554
EcoNI CCTNNNNNAGG 1 cut(s) 869
EcoO109I RGGNCCY 1 cut(s) 1002
EcoRII CCWGG 1 cut(s) 153
EcoRV GATATC 1 cut(s) 202
EcoT14I CCWWGG 1 cut(s) 389
EcoT38I GRGCYC 1 cut(s) 556
ErhI CCWWGG 1 cut(s) 389
FaeI CATG 2 cut(s) 174, 262
FalI AAGNNNNNCTT 6 cut(s) 55, 87, 584, 616, 814, 846
FatI CATG 2 cut(s) 170, 258
FauNDI CATATG 1 cut(s) 663
FbaI TGATCA 2 cut(s) 349, 810
Fnu4HI GCNGC 4 cut(s) 488, 658, 951, 954
FokI GGATG 1 cut(s) 526
FriOI GRGCYC 1 cut(s) 556
Fsp4HI GCNGC 4 cut(s) 488, 658, 951, 954
FspBI CTAG 2 cut(s) 687, 843
GluI GCNGC 4 cut(s) 488, 658, 951, 954
GsuI CTGGAG 1 cut(s) 702
HaeIII GGCC 5 cut(s) 13, 94, 229, 956, 1003
HapII CCGG 2 cut(s) 10, 847
Hin1II CATG 2 cut(s) 174, 262
HindIII AAGCTT 1 cut(s) 959
HinfI GANTC 4 cut(s) 568, 620, 827, 852
HpaII CCGG 2 cut(s) 10, 847
HphI GGTGA 1 cut(s) 359
Hpy166II GTNNAC 1 cut(s) 567
Hpy188I TCNGA 5 cut(s) 111, 206, 308, 752, 972
Hpy188III TCNNGA 5 cut(s) 434, 458, 549, 803, 986
Hpy8I GTNNAC 1 cut(s) 567
HpyAV CCTTC 6 cut(s) 189, 297, 303, 610, 785, 865
HpyCH4III ACNGT 1 cut(s) 715
HpyCH4V TGCA 3 cut(s) 68, 149, 944
HpyF10VI GCNNNNNNNGC 2 cut(s) 950, 962
HpyF3I CTNAG 4 cut(s) 243, 537, 729, 984
Hsp92II CATG 2 cut(s) 174, 262
Ksp22I TGATCA 2 cut(s) 349, 810
Kzo9I GATC 4 cut(s) 349, 473, 594, 810
LmnI GCTCC 4 cut(s) 244, 297, 559, 683
Lsp1109I GCAGC 3 cut(s) 474, 669, 962
MaeI CTAG 2 cut(s) 687, 843
MaeIII GTNAC 4 cut(s) 37, 378, 425, 824
MalI GATC 4 cut(s) 351, 475, 596, 812
MboI GATC 4 cut(s) 349, 473, 594, 810
MboII GAAGA 5 cut(s) 177, 295, 522, 525, 822
MfeI CAATTG 1 cut(s) 57
MflI RGATCY 1 cut(s) 473
MhlI GDGCHC 4 cut(s) 170, 419, 556, 983
MlyI GAGTC 3 cut(s) 562, 629, 821
MmeI TCCRAC 1 cut(s) 449
MseI TTAA 6 cut(s) 521, 542, 630, 821, 1028, 1057
MslI CAYNNNNRTG 2 cut(s) 173, 482
MspA1I CMGCKG 1 cut(s) 953
MspI CCGG 2 cut(s) 10, 847
MspR9I CCNGG 1 cut(s) 155
MunI CAATTG 1 cut(s) 57
Mva1269I GAATGC 1 cut(s) 489
MvaI CCWGG 1 cut(s) 155
MwoI GCNNNNNNNGC 2 cut(s) 950, 962
NdeI CATATG 1 cut(s) 663
NdeII GATC 4 cut(s) 349, 473, 594, 810
NlaIII CATG 2 cut(s) 174, 262
NlaIV GGNNCC 5 cut(s) 240, 299, 888, 921, 1004
NmuCI GTSAC 2 cut(s) 37, 824
NspI RCATGY 1 cut(s) 174
PciI ACATGT 1 cut(s) 170
PctI GAATGC 1 cut(s) 489
PfeI GAWTC 1 cut(s) 852
PkrI GCNGC 4 cut(s) 489, 659, 952, 955
PleI GAGTC 3 cut(s) 562, 628, 821
PpsI GAGTC 3 cut(s) 562, 628, 821
PscI ACATGT 1 cut(s) 170
Psp124BI GAGCTC 1 cut(s) 556
Psp6I CCWGG 1 cut(s) 153
PspGI CCWGG 1 cut(s) 153
PspN4I GGNNCC 5 cut(s) 240, 299, 888, 921, 1004
PspPI GGNCC 1 cut(s) 1002
PsuI RGATCY 1 cut(s) 473
RseI CAYNNNNRTG 2 cut(s) 173, 482
SacI GAGCTC 1 cut(s) 556
SaqAI TTAA 6 cut(s) 521, 542, 630, 821, 1028, 1057
SatI GCNGC 4 cut(s) 488, 658, 951, 954
Sau3AI GATC 4 cut(s) 349, 473, 594, 810
Sau96I GGNCC 1 cut(s) 1002
SchI GAGTC 3 cut(s) 562, 629, 821
ScrFI CCNGG 1 cut(s) 155
SduI GDGCHC 4 cut(s) 170, 419, 556, 983
SmiMI CAYNNNNRTG 2 cut(s) 173, 482
SmlI CTYRAG 1 cut(s) 458
SmoI CTYRAG 1 cut(s) 458
SsiI CCGC 2 cut(s) 937, 953
SspMI CTAG 2 cut(s) 687, 843
SstI GAGCTC 1 cut(s) 556
StyD4I CCNGG 1 cut(s) 153
StyI CCWWGG 1 cut(s) 389
TaaI ACNGT 1 cut(s) 715
TaqI TCGA 1 cut(s) 275
TauI GCSGC 1 cut(s) 956
TfiI GAWTC 1 cut(s) 852
Tru1I TTAA 6 cut(s) 521, 542, 630, 821, 1028, 1057
Tru9I TTAA 6 cut(s) 521, 542, 630, 821, 1028, 1057
TscAI CASTG 1 cut(s) 389
TseFI GTSAC 2 cut(s) 37, 824
TseI GCWGC 3 cut(s) 487, 657, 950
Tsp45I GTSAC 2 cut(s) 37, 824
TspDTI ATGAA 2 cut(s) 247, 896
TspGWI ACGGA 1 cut(s) 488
TspRI CASTG 1 cut(s) 389
XagI CCTNNNNNAGG 1 cut(s) 869
XapI RAATTY 2 cut(s) 207, 447
XceI RCATGY 1 cut(s) 174
XspI CTAG 2 cut(s) 687, 843
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.