Prupe.2G092000_v2.0.a1

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000093
Physical Location & Seq
Forward (+)
14491531 .. 14492587
1057 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G092000.1

Sequence Viewer

Length: 1026 bp
ATGAAGCATCGACCATCTTACTCTCTTGAGGTCAGCCTAAAAGTTTGGAATTTGCTATGGAAGGCAGCAATCCCCCTCAAAATGAAACACTTCCTCTGGAGGACAGTTCACGGAACTTTGGCAATTGAACTGGCTCTTTTCAATCGCAAGATCAGACAAACCCCCATTTGCCCATTATGCAAAGAGCATGAGGAGTTTGTTGAGCACCTTATTTTGCTTTGTCCTTGGGTGAGTCTAATATGGTCTGGAGTGTTACCTAATTGGATCAATGGCTTTTGGAGTGCACCACAAAAGCACATCTTACGCCAAATCACTATCACTGCGTGGGCTATTTGGAAAGCAAGGAACATAGCCATGTTTGATGATGTGCCCCTTAATCCAATCCTCACCATTCAATCCATCACCTCTCAACTCACAGAGCTTAATATGATTTTGGACGTGACAAGGGATAAAATGACCAGACATGATGAACCCATCCCTACGCGCCTATGGTATGCTCCAATCACTCCAAACTTAAAGATTGATGTGGCTTGGCACTCTTCTTCTCGCCGAGATGGTGTGGATATTATTATTCGTAATGCGCATGAAATGTTTGTGGGTACCAACGTCATTCCTTTCTCGGTTGAGTCGGCAATCATGGCTGAAGCTAATGCCGCCCTTAAGGGTTGTCTCTTTGCAATGGAGCTGGGTCTTACTTGTGCTTGTTTCGAATCGAACTCAAAGGAACTCGTGGACAGCATCAATGGCAATATCCGAAGGGGACGATGGTGTCTGTACCCCATTCTTACTAGAATTCGCGATTATCATCACAACTTCAAACATTGTACCTGGACTTGGATGCGCAAGTCTAGAAACGAAGCTACAGATCATTTGGCAACTATCGCACTATTGAGGTTGAGCCCGGGAGTCTGGACATCCAGCCCCCCTCTCCTCCCCCCACCTCACTTGTGCATGTTCTCTACAACGATGGTCTCCCTTGCCCGCCAACAAGTGCCAAATGCTGTGTGCCAGTTTGGATGGCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

342

Amino Acids

39.27

Weight (kDa)

9.22

Isoelectric Point (pI)

48.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000093)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G09490
fragaria_vesca FvH4_1g23791 FvH4_2g01641 FvH4_2g04612 FvH4_2g06831 FvH4_2g07841 FvH4_2g13581 FvH4_2g27220 FvH4_2g30621 FvH4_2g34753 FvH4_3g10392 FvH4_3g24291 FvH4_3g25030 FvH4_3g29361 FvH4_3g31372 FvH4_3g32402 FvH4_3g43651 FvH4_4g03830 FvH4_4g05481 FvH4_4g20431 FvH4_4g21421 FvH4_4g25931 FvH4_5g08801 FvH4_5g21021 FvH4_5g26254 FvH4_5g30931 FvH4_5g31281 FvH4_5g33581 FvH4_5g35622 FvH4_6g02100 FvH4_6g07963 FvH4_6g11620 FvH4_6g16031 FvH4_6g19041 FvH4_6g24211 FvH4_6g24271 FvH4_6g30670 FvH4_6g49540 FvH4_7g25914
malus_domestica MD03G1245200.v1.1 MD04G1168000.v1.1 MD09G1242600.v1.1 MD15G1334000.v1.1 MD17G1165700.v1.1
prunus_persica Prupe.1G073500_v2.0.a1 Prupe.1G283700_v2.0.a1 Prupe.1G524100_v2.0.a1 Prupe.2G022700_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G044300_v2.0.a1 Prupe.2G048800_v2.0.a1 Prupe.2G092000_v2.0.a1 Prupe.2G216500_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.3G103400_v2.0.a1 Prupe.3G143300_v2.0.a1 Prupe.3G190000_v2.0.a1 Prupe.3G219800_v2.0.a1 Prupe.4G177800_v2.0.a1 Prupe.4G261300_v2.0.a1 Prupe.5G044600_v2.0.a1 Prupe.5G067400_v2.0.a1 Prupe.7G083900_v2.0.a1 Prupe.7G120900_v2.0.a1 Prupe.8G032200_v2.0.a1 Prupe.8G036100_v2.0.a1 Prupe.8G042700_v2.0.a1
pyrus_communis pycom01g21710 pycom02g19770 pycom03g05120 pycom05g01370 pycom05g08780 pycom05g10120 pycom07g01370 pycom07g05930 pycom08g15760 pycom08g18090 pycom08g21060 pycom09g03880 pycom10g03870 pycom13g22240 pycom16g05120 pycom16g17170 pycom17g12180 pycom17g16290 pycom17g21230 pycom17g24990 pycom215g00100
rosa_chinensis RchiOBHm_Chr1g0323031 RchiOBHm_Chr1g0324391 RchiOBHm_Chr1g0326401 RchiOBHm_Chr1g0327811 RchiOBHm_Chr1g0332521 RchiOBHm_Chr1g0336501 RchiOBHm_Chr1g0346021 RchiOBHm_Chr1g0347191 RchiOBHm_Chr1g0367181 RchiOBHm_Chr2g0089441 RchiOBHm_Chr2g0115441 RchiOBHm_Chr3g0490691 RchiOBHm_Chr4g0395251 RchiOBHm_Chr4g0398081 RchiOBHm_Chr4g0409451 RchiOBHm_Chr4g0413041 RchiOBHm_Chr4g0415471 RchiOBHm_Chr4g0420961 RchiOBHm_Chr5g0040301 RchiOBHm_Chr5g0070651 RchiOBHm_Chr6g0263011 RchiOBHm_Chr6g0270721 RchiOBHm_Chr6g0277111 RchiOBHm_Chr7g0179771 RchiOBHm_Chr7g0223051 RchiOBHm_Chr7g0225031 RchiOBHm_Chr7g0225091
rosa_laevigata RLG00000001668 RLG00000001672 RLG00000001676 RLG00000007762 RLG00000008994 RLG00000011117 RLG00000013729 RLG00000013839 RLG00000014759 RLG00000016638 RLG00000018535 RLG00000018614 RLG00000018646 RLG00000020679 RLG00000023337 RLG00000029348 RLG00000035891 RLG00000035912
rosa_multiflora Rmu_co8152500.1_g000001 Rmu_co8203314.1_g000001 Rmu_co8383183.1_g000001 Rmu_sc0000293.1_g000033 Rmu_sc0000367.1_g000226 Rmu_sc0000512.1_g000023 Rmu_sc0000594.1_g000059 Rmu_sc0000654.1_g000022 Rmu_sc0000654.1_g000047 Rmu_sc0000706.1_g000037 Rmu_sc0001348.1_g000008 Rmu_sc0001385.1_g000024 Rmu_sc0001405.1_g000002 Rmu_sc0001521.1_g000048 Rmu_sc0001932.1_g000008 Rmu_sc0001932.1_g000009 Rmu_sc0002535.1_g000011 Rmu_sc0002908.1_g000019 Rmu_sc0003709.1_g000004 Rmu_sc0003882.1_g000054 Rmu_sc0004035.1_g000007 Rmu_sc0004041.1_g000007 Rmu_sc0004288.1_g000011 Rmu_sc0004569.1_g000004 Rmu_sc0004677.1_g000016 Rmu_sc0004834.1_g000010 Rmu_sc0005193.1_g000008 Rmu_sc0005354.1_g000009 Rmu_sc0006514.1_g000021 Rmu_sc0006691.1_g000001 Rmu_sc0006888.1_g000021 Rmu_sc0006889.1_g000013 Rmu_sc0008096.1_g000017 Rmu_sc0008378.1_g000003 Rmu_sc0009127.1_g000005 Rmu_sc0009191.1_g000016 Rmu_sc0009687.1_g000018 Rmu_sc0009709.1_g000005 Rmu_sc0009880.1_g000015 Rmu_sc0011710.1_g000001 Rmu_sc0012615.1_g000004 Rmu_sc0016091.1_g000002 Rmu_sc0022339.1_g000006 Rmu_sc0026537.1_g000002 Rmu_sc0027689.1_g000002 Rmu_sc0036222.1_g000001 Rmu_sc0040890.1_g000001 Rmu_ssc0000148.1_g000006 Rmu_ssc0000151.1_g000017 Rmu_ssc0000404.1_g000018 Rmu_ssc0000449.1_g000009
rosa_roxburghii Rroxscaffold_1G00017760 Rroxscaffold_1G00059150 Rroxscaffold_2G00142560 Rroxscaffold_3G00220440 Rroxscaffold_3G00231700 Rroxscaffold_3G00232400 Rroxscaffold_3G00274510 Rroxscaffold_4G00288790 Rroxscaffold_4G00305680 Rroxscaffold_4G00314880 Rroxscaffold_4G00314900 Rroxscaffold_5G00334590 Rroxscaffold_6G00394110 Rroxscaffold_6G00415860 Rroxscaffold_7G00168240 Rroxscaffold_7G00204400 Rroxscaffold_7G00207840
rosa_rugosa Rorug01G0034900 Rorug02G0079500 Rorug02G0229000 Rorug02G0229100 Rorug02G0291400 Rorug02G0298800 Rorug03G0046400 Rorug03G0064700 Rorug03G0077300 Rorug03G0199000 Rorug03G0200400 Rorug04G0205200 Rorug05G0025400 Rorug05G0127400 Rorug05G0192100 Rorug05G0453400 Rorug05G0538300 Rorug06G0035200 Rorug06G0241000 Rorug06G0268300 Rorug07G0120300 Rorug07G0145000 Rorug07G0209100 Rorug07G0240500 Rorug07G0271700
rosa_samantha Rh1AG179100 Rh1BG106900 Rh1BG163400 Rh1BG163500 Rh1BG323500 Rh2CG447900 Rh2DG503700 Rh3AG293600 Rh3CG229100 Rh3DG221500 Rh4AG106000 Rh4BG267700 Rh4CG062500 Rh4CG090100 Rh4CG114800 Rh5AG038400 Rh5BG395400 Rh5CG441700 Rh5CG572000 Rh6AG222400 Rh6AG264500 Rh6BG137400 Rh6BG225700 Rh6CG144300 Rh6DG087600 Rh6DG096000 Rh6DG362400 Rh6DG390200 Rh7AG207500 Rh7AG324700 Rh7AG388800 Rh7AG437100 Rh7BG019000 Rh7BG374600 Rh7CG028700 Rh7CG341500 Rh7CG408000 Rh7CG408300 Rh7DG354600
rosa_wichuraiana Rw0G009630 Rw0G012170 Rw4G022700 Rw5G028420 Rw5G029490 Rw6G007220 Rw6G007410 Rw6G017880 Rw7G012440 Rw7G021830 Rw7G027490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 768
Acc16I TGCGCA 2 cut(s) 582, 842
Acc65I GGTACC 1 cut(s) 599
AccB1I GGYRCC 1 cut(s) 599
AccII CGCG 2 cut(s) 484, 798
AciI CCGC 2 cut(s) 654, 982
AclWI GGATC 1 cut(s) 272
AcsI RAATTY 2 cut(s) 49, 792
AcuI CTGAAG 1 cut(s) 663
AdeI CACNNNGTG 1 cut(s) 324
AfaI GTAC 3 cut(s) 601, 776, 826
AfiI CCNNNNNNNGG 1 cut(s) 834
AflII CTTAAG 1 cut(s) 659
AgsI TTSAA 4 cut(s) 128, 142, 395, 817
AjiI CACGTC 1 cut(s) 439
AjnI CCWGG 1 cut(s) 827
AluBI AGCT 4 cut(s) 421, 647, 685, 860
AluI AGCT 4 cut(s) 421, 647, 685, 860
Alw21I GWGCWC 2 cut(s) 207, 286
Alw26I GTCTC 2 cut(s) 674, 976
Alw44I GTGCAC 1 cut(s) 282
AlwI GGATC 1 cut(s) 272
Ama87I CYCGRG 1 cut(s) 901
ApaLI GTGCAC 1 cut(s) 282
ApeKI GCWGC 1 cut(s) 65
ApoI RAATTY 2 cut(s) 49, 792
Asp700I GAANNNNTTC 1 cut(s) 89
Asp718I GGTACC 1 cut(s) 599
AspLEI GCGC 3 cut(s) 486, 583, 843
AsuC2I CCSGG 2 cut(s) 902, 903
AsuHPI GGTGA 3 cut(s) 241, 379, 394
AsuII TTCGAA 1 cut(s) 708
AvaI CYCGRG 1 cut(s) 901
BaeGI GKGCMC 2 cut(s) 286, 372
BaeI ACNNNNGTAYC 2 cut(s) 591, 624
BanI GGYRCC 1 cut(s) 599
BanII GRGCYC 1 cut(s) 902
BauI CACGAG 1 cut(s) 728
Bbv12I GWGCWC 2 cut(s) 207, 286
BbvI GCAGC 1 cut(s) 77
BccI CCATC 7 cut(s) 22, 407, 482, 548, 759, 961, 1011
BciT130I CCWGG 1 cut(s) 829
BcnI CCSGG 2 cut(s) 902, 903
BcoDI GTCTC 2 cut(s) 674, 976
BfaI CTAG 2 cut(s) 789, 849
BfmI CTRYAG 1 cut(s) 861
BfrI CTTAAG 1 cut(s) 659
BisI GCNGC 2 cut(s) 66, 654
BlsI GCNGC 2 cut(s) 67, 655
Bme1390I CCNGG 3 cut(s) 829, 902, 903
BmeT110I CYCGRG 1 cut(s) 901
BmgBI CACGTC 1 cut(s) 439
BmiI GGNNCC 1 cut(s) 601
BmrFI CCNGG 3 cut(s) 829, 902, 903
BmsI GCATC 3 cut(s) 16, 747, 828
BpmI CTGGAG 2 cut(s) 118, 267
Bpu14I TTCGAA 1 cut(s) 708
BpuEI CTTGAG 1 cut(s) 47
BpuMI CCSGG 2 cut(s) 902, 903
BsaBI GATNNNNATC 1 cut(s) 804
BsaI GGTCTC 1 cut(s) 976
BsaJI CCNNGG 2 cut(s) 224, 901
Bsc4I CCNNNNNNNGG 1 cut(s) 834
Bse1I ACTGG 2 cut(s) 135, 1009
Bse3DI GCAATG 1 cut(s) 684
Bse8I GATNNNNATC 1 cut(s) 804
BseBI CCWGG 1 cut(s) 829
BseDI CCNNGG 2 cut(s) 224, 901
BseGI GGATG 4 cut(s) 474, 843, 914, 1022
BseJI GATNNNNATC 1 cut(s) 804
BseLI CCNNNNNNNGG 1 cut(s) 834
BseMI GCAATG 1 cut(s) 684
BseNI ACTGG 2 cut(s) 135, 1009
BseRI GAGGAG 2 cut(s) 206, 920
BseSI GKGCMC 2 cut(s) 286, 372
BseXI GCAGC 1 cut(s) 77
BseYI CCCAGC 1 cut(s) 685
Bsh1236I CGCG 2 cut(s) 484, 798
BshNI GGYRCC 1 cut(s) 599
BsiHKAI GWGCWC 2 cut(s) 207, 286
BsiHKCI CYCGRG 1 cut(s) 901
BsiSI CCGG 1 cut(s) 902
BslFI GGGAC 1 cut(s) 774
BslI CCNNNNNNNGG 1 cut(s) 834
BsmAI GTCTC 2 cut(s) 674, 976
BsmFI GGGAC 1 cut(s) 774
Bso31I GGTCTC 1 cut(s) 976
BsoBI CYCGRG 1 cut(s) 901
Bsp119I TTCGAA 1 cut(s) 708
Bsp1286I GDGCHC 4 cut(s) 207, 286, 372, 902
Bsp143I GATC 3 cut(s) 150, 264, 865
Bsp68I TCGCGA 1 cut(s) 798
BspACI CCGC 2 cut(s) 654, 982
BspFNI CGCG 2 cut(s) 484, 798
BspLI GGNNCC 1 cut(s) 601
BspPI GGATC 1 cut(s) 272
BspT104I TTCGAA 1 cut(s) 708
BspT107I GGYRCC 1 cut(s) 599
BspTI CTTAAG 1 cut(s) 659
BspTNI GGTCTC 1 cut(s) 976
BsrDI GCAATG 1 cut(s) 684
BsrI ACTGG 2 cut(s) 135, 1009
BssECI CCNNGG 2 cut(s) 224, 901
BssMI GATC 3 cut(s) 150, 264, 865
BssSI CACGAG 1 cut(s) 728
BssT1I CCWWGG 1 cut(s) 224
Bst2BI CACGAG 1 cut(s) 728
Bst2UI CCWGG 1 cut(s) 829
Bst4CI ACNGT 1 cut(s) 106
Bst6I CTCTTC 1 cut(s) 544
BstAFI CTTAAG 1 cut(s) 659
BstBI TTCGAA 1 cut(s) 708
BstC8I GCNNGC 1 cut(s) 982
BstF5I GGATG 4 cut(s) 474, 843, 914, 1022
BstFNI CGCG 2 cut(s) 484, 798
BstHHI GCGC 3 cut(s) 486, 583, 843
BstKTI GATC 3 cut(s) 153, 267, 868
BstMAI GTCTC 2 cut(s) 674, 976
BstMBI GATC 3 cut(s) 150, 264, 865
BstMWI GCNNNNNNNGC 5 cut(s) 177, 638, 653, 744, 881
BstNI CCWGG 1 cut(s) 829
BstNSI RCATGY 1 cut(s) 955
BstSCI CCNGG 3 cut(s) 827, 900, 901
BstSFI CTRYAG 1 cut(s) 861
BstSLI GKGCMC 2 cut(s) 286, 372
BstUI CGCG 2 cut(s) 484, 798
BstV1I GCAGC 1 cut(s) 77
BtrI CACGTC 1 cut(s) 439
BtsCI GGATG 4 cut(s) 474, 843, 914, 1022
BtsI GCAGTG 1 cut(s) 318
BtsIMutI CAGTG 1 cut(s) 318
BtuMI TCGCGA 1 cut(s) 798
Cac8I GCNNGC 1 cut(s) 982
CfoI GCGC 3 cut(s) 486, 583, 843
Cfr9I CCCGGG 1 cut(s) 901
Csp6I GTAC 3 cut(s) 600, 775, 825
CspCI CAANNNNNGTGG 2 cut(s) 927, 962
CviAII CATG 6 cut(s) 188, 355, 464, 584, 637, 952
CviQI GTAC 3 cut(s) 600, 775, 825
DpnI GATC 3 cut(s) 152, 266, 867
DpnII GATC 3 cut(s) 150, 264, 865
DraIII CACNNNGTG 1 cut(s) 324
DrdI GACNNNNNNGTC 1 cut(s) 768
DseDI GACNNNNNNGTC 1 cut(s) 768
Eam1104I CTCTTC 1 cut(s) 544
EarI CTCTTC 1 cut(s) 544
Eco130I CCWWGG 1 cut(s) 224
Eco24I GRGCYC 1 cut(s) 902
Eco31I GGTCTC 1 cut(s) 976
Eco57I CTGAAG 1 cut(s) 663
Eco88I CYCGRG 1 cut(s) 901
EcoRI GAATTC 1 cut(s) 792
EcoRII CCWGG 1 cut(s) 827
EcoT14I CCWWGG 1 cut(s) 224
EcoT38I GRGCYC 1 cut(s) 902
ErhI CCWWGG 1 cut(s) 224
FaeI CATG 6 cut(s) 191, 358, 467, 587, 640, 955
FalI AAGNNNNNCTT 2 cut(s) 284, 316
FaqI GGGAC 1 cut(s) 774
FatI CATG 6 cut(s) 187, 354, 463, 583, 636, 951
FauI CCCGC 1 cut(s) 989
Fnu4HI GCNGC 2 cut(s) 66, 654
FokI GGATG 3 cut(s) 461, 850, 901
FriOI GRGCYC 1 cut(s) 902
Fsp4HI GCNGC 2 cut(s) 66, 654
FspAI RTGCGCAY 1 cut(s) 582
FspBI CTAG 2 cut(s) 789, 849
FspI TGCGCA 2 cut(s) 582, 842
GlaI GCGC 3 cut(s) 485, 582, 842
GluI GCNGC 2 cut(s) 66, 654
GsaI CCCAGC 1 cut(s) 689
GsuI CTGGAG 2 cut(s) 118, 267
HapII CCGG 1 cut(s) 902
HhaI GCGC 3 cut(s) 486, 583, 843
Hin1II CATG 6 cut(s) 191, 358, 467, 587, 640, 955
Hin6I GCGC 3 cut(s) 484, 581, 841
HinP1I GCGC 3 cut(s) 484, 581, 841
HinfI GANTC 4 cut(s) 232, 626, 710, 906
HpaII CCGG 1 cut(s) 902
HphI GGTGA 3 cut(s) 241, 379, 394
Hpy166II GTNNAC 3 cut(s) 109, 284, 733
Hpy188I TCNGA 3 cut(s) 155, 755, 1025
Hpy188III TCNNGA 6 cut(s) 26, 97, 246, 797, 849, 910
Hpy8I GTNNAC 3 cut(s) 109, 284, 733
HpyAV CCTTC 2 cut(s) 55, 750
HpyCH4III ACNGT 1 cut(s) 106
HpyCH4IV ACGT 2 cut(s) 438, 606
HpyCH4V TGCA 4 cut(s) 180, 284, 677, 951
HpyF10VI GCNNNNNNNGC 5 cut(s) 177, 638, 653, 744, 881
HpySE526I ACGT 2 cut(s) 438, 606
Hsp92II CATG 6 cut(s) 191, 358, 467, 587, 640, 955
HspAI GCGC 3 cut(s) 484, 581, 841
KpnI GGTACC 1 cut(s) 603
Kzo9I GATC 3 cut(s) 150, 264, 865
LmnI GCTCC 2 cut(s) 502, 682
Lsp1109I GCAGC 1 cut(s) 77
LweI GCATC 3 cut(s) 16, 747, 828
MaeI CTAG 2 cut(s) 789, 849
MaeII ACGT 2 cut(s) 438, 606
MaeIII GTNAC 2 cut(s) 252, 439
MalI GATC 3 cut(s) 152, 266, 867
MboI GATC 3 cut(s) 150, 264, 865
MboII GAAGA 2 cut(s) 531, 534
MfeI CAATTG 1 cut(s) 123
MhlI GDGCHC 4 cut(s) 207, 286, 372, 902
MluCI AATT 4 cut(s) 49, 123, 259, 792
MlyI GAGTC 3 cut(s) 241, 635, 915
MroXI GAANNNNTTC 1 cut(s) 89
MseI TTAA 4 cut(s) 375, 423, 515, 660
MslI CAYNNNNRTG 1 cut(s) 353
MspCI CTTAAG 1 cut(s) 659
MspI CCGG 1 cut(s) 902
MspR9I CCNGG 3 cut(s) 829, 902, 903
MunI CAATTG 1 cut(s) 123
MvaI CCWGG 1 cut(s) 829
MvnI CGCG 2 cut(s) 484, 798
MwoI GCNNNNNNNGC 5 cut(s) 177, 638, 653, 744, 881
NciI CCSGG 2 cut(s) 902, 903
NdeII GATC 3 cut(s) 150, 264, 865
NlaIII CATG 6 cut(s) 191, 358, 467, 587, 640, 955
NlaIV GGNNCC 1 cut(s) 601
NmeAIII GCCGAG 1 cut(s) 575
NmuCI GTSAC 1 cut(s) 439
NruI TCGCGA 1 cut(s) 798
NsbI TGCGCA 2 cut(s) 582, 842
NspI RCATGY 1 cut(s) 955
NspV TTCGAA 1 cut(s) 708
PdmI GAANNNNTTC 1 cut(s) 89
PfeI GAWTC 1 cut(s) 710
PkrI GCNGC 2 cut(s) 67, 655
PleI GAGTC 3 cut(s) 240, 634, 914
PpsI GAGTC 3 cut(s) 240, 634, 914
Psp6I CCWGG 1 cut(s) 827
PspFI CCCAGC 1 cut(s) 685
PspGI CCWGG 1 cut(s) 827
PspN4I GGNNCC 1 cut(s) 601
RruI TCGCGA 1 cut(s) 798
RsaI GTAC 3 cut(s) 601, 776, 826
RsaNI GTAC 3 cut(s) 600, 775, 825
RseI CAYNNNNRTG 1 cut(s) 353
SaqAI TTAA 4 cut(s) 375, 423, 515, 660
SatI GCNGC 2 cut(s) 66, 654
Sau3AI GATC 3 cut(s) 150, 264, 865
SchI GAGTC 3 cut(s) 241, 635, 915
ScrFI CCNGG 3 cut(s) 829, 902, 903
SduI GDGCHC 4 cut(s) 207, 286, 372, 902
SfaNI GCATC 3 cut(s) 16, 747, 828
SfcI CTRYAG 1 cut(s) 861
SfuI TTCGAA 1 cut(s) 708
SmaI CCCGGG 1 cut(s) 903
SmiMI CAYNNNNRTG 1 cut(s) 353
SmlI CTYRAG 2 cut(s) 26, 659
SmoI CTYRAG 2 cut(s) 26, 659
Sse9I AATT 4 cut(s) 49, 123, 259, 792
SsiI CCGC 2 cut(s) 654, 982
SspMI CTAG 2 cut(s) 789, 849
StyD4I CCNGG 3 cut(s) 827, 900, 901
StyI CCWWGG 1 cut(s) 224
TaaI ACNGT 1 cut(s) 106
TaiI ACGT 2 cut(s) 441, 609
TaqI TCGA 3 cut(s) 10, 708, 713
TasI AATT 4 cut(s) 49, 123, 259, 792
TauI GCSGC 1 cut(s) 656
TfiI GAWTC 1 cut(s) 710
Tru1I TTAA 4 cut(s) 375, 423, 515, 660
Tru9I TTAA 4 cut(s) 375, 423, 515, 660
TscAI CASTG 1 cut(s) 325
TseFI GTSAC 1 cut(s) 439
TseI GCWGC 1 cut(s) 65
Tsp45I GTSAC 1 cut(s) 439
TspDTI ATGAA 4 cut(s) 17, 98, 483, 600
TspGWI ACGGA 1 cut(s) 126
TspMI CCCGGG 1 cut(s) 901
TspRI CASTG 1 cut(s) 325
Vha464I CTTAAG 1 cut(s) 659
VneI GTGCAC 1 cut(s) 282
XapI RAATTY 2 cut(s) 49, 792
XbaI TCTAGA 1 cut(s) 848
XceI RCATGY 1 cut(s) 955
XmaI CCCGGG 1 cut(s) 901
XmnI GAANNNNTTC 1 cut(s) 89
XspI CTAG 2 cut(s) 789, 849
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.