Ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 42 - 101 | 9.7e-09 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 155 |
| AccIII | TCCGGA | 1 cut(s) | 106 |
| AciI | CCGC | 1 cut(s) | 203 |
| AclWI | GGATC | 2 cut(s) | 140, 217 |
| AcuI | CTGAAG | 1 cut(s) | 267 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 155 |
| AgsI | TTSAA | 2 cut(s) | 239, 287 |
| AluBI | AGCT | 1 cut(s) | 245 |
| AluI | AGCT | 1 cut(s) | 245 |
| Alw26I | GTCTC | 1 cut(s) | 16 |
| AlwI | GGATC | 2 cut(s) | 140, 217 |
| Aor13HI | TCCGGA | 1 cut(s) | 106 |
| AoxI | GGCC | 1 cut(s) | 135 |
| ApeKI | GCWGC | 1 cut(s) | 242 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 322 |
| AspS9I | GGNCC | 1 cut(s) | 4 |
| AsuC2I | CCSGG | 1 cut(s) | 62 |
| AsuHPI | GGTGA | 1 cut(s) | 127 |
| AvaII | GGWCC | 1 cut(s) | 4 |
| BbvI | GCAGC | 1 cut(s) | 254 |
| BccI | CCATC | 1 cut(s) | 157 |
| BcnI | CCSGG | 1 cut(s) | 62 |
| BcoDI | GTCTC | 1 cut(s) | 16 |
| BisI | GCNGC | 1 cut(s) | 243 |
| BlsI | GCNGC | 1 cut(s) | 244 |
| Bme1390I | CCNGG | 1 cut(s) | 62 |
| Bme18I | GGWCC | 1 cut(s) | 4 |
| BmgT120I | GGNCC | 1 cut(s) | 4 |
| BmiI | GGNNCC | 1 cut(s) | 96 |
| BmrFI | CCNGG | 1 cut(s) | 62 |
| BpuMI | CCSGG | 1 cut(s) | 62 |
| BsaJI | CCNNGG | 3 cut(s) | 60, 138, 265 |
| BsaWI | WCCGGW | 1 cut(s) | 106 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 155 |
| Bse1I | ACTGG | 2 cut(s) | 30, 282 |
| BseAI | TCCGGA | 1 cut(s) | 106 |
| BseDI | CCNNGG | 3 cut(s) | 60, 138, 265 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 155 |
| BseNI | ACTGG | 2 cut(s) | 30, 282 |
| BseRI | GAGGAG | 2 cut(s) | 90, 93 |
| BseXI | GCAGC | 1 cut(s) | 254 |
| BshFI | GGCC | 1 cut(s) | 137 |
| BsiSI | CCGG | 2 cut(s) | 62, 107 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 155 |
| BsmAI | GTCTC | 1 cut(s) | 16 |
| BsnI | GGCC | 1 cut(s) | 137 |
| Bsp13I | TCCGGA | 1 cut(s) | 106 |
| Bsp143I | GATC | 3 cut(s) | 145, 181, 209 |
| BspACI | CCGC | 1 cut(s) | 203 |
| BspANI | GGCC | 1 cut(s) | 137 |
| BspEI | TCCGGA | 1 cut(s) | 106 |
| BspLI | GGNNCC | 1 cut(s) | 96 |
| BspPI | GGATC | 2 cut(s) | 140, 217 |
| BsrI | ACTGG | 2 cut(s) | 30, 282 |
| BssECI | CCNNGG | 3 cut(s) | 60, 138, 265 |
| BssMI | GATC | 3 cut(s) | 145, 181, 209 |
| BssT1I | CCWWGG | 2 cut(s) | 138, 265 |
| Bst4CI | ACNGT | 1 cut(s) | 128 |
| Bst6I | CTCTTC | 1 cut(s) | 76 |
| BstDEI | CTNAG | 1 cut(s) | 13 |
| BstKTI | GATC | 3 cut(s) | 148, 184, 212 |
| BstMAI | GTCTC | 1 cut(s) | 16 |
| BstMBI | GATC | 3 cut(s) | 145, 181, 209 |
| BstSCI | CCNGG | 1 cut(s) | 60 |
| BstV1I | GCAGC | 1 cut(s) | 254 |
| BsuRI | GGCC | 1 cut(s) | 137 |
| Cfr13I | GGNCC | 1 cut(s) | 4 |
| CviJI | RGCY | 3 cut(s) | 65, 137, 245 |
| CviKI_1 | RGCY | 3 cut(s) | 65, 137, 245 |
| DdeI | CTNAG | 1 cut(s) | 13 |
| DpnI | GATC | 3 cut(s) | 147, 183, 211 |
| DpnII | GATC | 3 cut(s) | 145, 181, 209 |
| Eam1104I | CTCTTC | 1 cut(s) | 76 |
| EarI | CTCTTC | 1 cut(s) | 76 |
| Eco130I | CCWWGG | 2 cut(s) | 138, 265 |
| Eco47I | GGWCC | 1 cut(s) | 4 |
| Eco57I | CTGAAG | 1 cut(s) | 267 |
| EcoT14I | CCWWGG | 2 cut(s) | 138, 265 |
| ErhI | CCWWGG | 2 cut(s) | 138, 265 |
| FaiI | YATR | 3 cut(s) | 186, 194, 291 |
| FauI | CCCGC | 1 cut(s) | 196 |
| Fnu4HI | GCNGC | 1 cut(s) | 243 |
| Fsp4HI | GCNGC | 1 cut(s) | 243 |
| GluI | GCNGC | 1 cut(s) | 243 |
| HaeIII | GGCC | 1 cut(s) | 137 |
| HapII | CCGG | 2 cut(s) | 62, 107 |
| HinfI | GANTC | 3 cut(s) | 175, 270, 323 |
| HpaII | CCGG | 2 cut(s) | 62, 107 |
| HphI | GGTGA | 1 cut(s) | 127 |
| Hpy188I | TCNGA | 1 cut(s) | 76 |
| Hpy188III | TCNNGA | 2 cut(s) | 107, 179 |
| HpyCH4III | ACNGT | 1 cut(s) | 128 |
| HpyCH4V | TGCA | 1 cut(s) | 257 |
| HpyF3I | CTNAG | 1 cut(s) | 13 |
| Kpn2I | TCCGGA | 1 cut(s) | 106 |
| Kzo9I | GATC | 3 cut(s) | 145, 181, 209 |
| LpnPI | CCDG | 4 cut(s) | 11, 75, 120, 263 |
| Lsp1109I | GCAGC | 1 cut(s) | 254 |
| MaeIII | GTNAC | 2 cut(s) | 115, 224 |
| MalI | GATC | 3 cut(s) | 147, 183, 211 |
| MboI | GATC | 3 cut(s) | 145, 181, 209 |
| MboII | GAAGA | 3 cut(s) | 63, 260, 287 |
| MfeI | CAATTG | 1 cut(s) | 282 |
| MluCI | AATT | 2 cut(s) | 258, 282 |
| MlyI | GAGTC | 1 cut(s) | 279 |
| MnlI | CCTC | 4 cut(s) | 108, 111, 114, 152 |
| MroI | TCCGGA | 1 cut(s) | 106 |
| MroXI | GAANNNNTTC | 1 cut(s) | 322 |
| MseI | TTAA | 1 cut(s) | 123 |
| MspA1I | CMGCKG | 1 cut(s) | 245 |
| MspI | CCGG | 2 cut(s) | 62, 107 |
| MspR9I | CCNGG | 1 cut(s) | 62 |
| MunI | CAATTG | 1 cut(s) | 282 |
| NciI | CCSGG | 1 cut(s) | 62 |
| NdeII | GATC | 3 cut(s) | 145, 181, 209 |
| NlaIV | GGNNCC | 1 cut(s) | 96 |
| NmuCI | GTSAC | 2 cut(s) | 115, 224 |
| PdmI | GAANNNNTTC | 1 cut(s) | 322 |
| PfeI | GAWTC | 2 cut(s) | 175, 323 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 155 |
| PkrI | GCNGC | 1 cut(s) | 244 |
| PleI | GAGTC | 1 cut(s) | 278 |
| PpsI | GAGTC | 1 cut(s) | 278 |
| PspN4I | GGNNCC | 1 cut(s) | 96 |
| PspPI | GGNCC | 1 cut(s) | 4 |
| PvuII | CAGCTG | 1 cut(s) | 245 |
| SaqAI | TTAA | 1 cut(s) | 123 |
| SatI | GCNGC | 1 cut(s) | 243 |
| Sau3AI | GATC | 3 cut(s) | 145, 181, 209 |
| Sau96I | GGNCC | 1 cut(s) | 4 |
| SchI | GAGTC | 1 cut(s) | 279 |
| ScrFI | CCNGG | 1 cut(s) | 62 |
| SetI | ASST | 4 cut(s) | 100, 163, 169, 247 |
| SinI | GGWCC | 1 cut(s) | 4 |
| Sse9I | AATT | 2 cut(s) | 258, 282 |
| SsiI | CCGC | 1 cut(s) | 203 |
| StyD4I | CCNGG | 1 cut(s) | 60 |
| StyI | CCWWGG | 2 cut(s) | 138, 265 |
| TaaI | ACNGT | 1 cut(s) | 128 |
| TaqI | TCGA | 4 cut(s) | 144, 178, 212, 273 |
| TasI | AATT | 2 cut(s) | 258, 282 |
| TfiI | GAWTC | 2 cut(s) | 175, 323 |
| Tru1I | TTAA | 1 cut(s) | 123 |
| Tru9I | TTAA | 1 cut(s) | 123 |
| TseFI | GTSAC | 2 cut(s) | 115, 224 |
| TseI | GCWGC | 1 cut(s) | 242 |
| Tsp45I | GTSAC | 2 cut(s) | 115, 224 |
| TspDTI | ATGAA | 2 cut(s) | 70, 287 |
| TspGWI | ACGGA | 1 cut(s) | 243 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 155 |
| VpaK11BI | GGWCC | 1 cut(s) | 4 |
| XmnI | GAANNNNTTC | 1 cut(s) | 322 |