Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 215, 224 |
| AcoI | YGGCCR | 1 cut(s) | 225 |
| AcuI | CTGAAG | 1 cut(s) | 151 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 214, 261 |
| AgsI | TTSAA | 2 cut(s) | 40, 157 |
| AluBI | AGCT | 5 cut(s) | 203, 232, 296, 350, 356 |
| AluI | AGCT | 5 cut(s) | 203, 232, 296, 350, 356 |
| Alw26I | GTCTC | 1 cut(s) | 389 |
| AoxI | GGCC | 1 cut(s) | 225 |
| ApeKI | GCWGC | 4 cut(s) | 29, 221, 350, 353 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 144 |
| AsuNHI | GCTAGC | 1 cut(s) | 232 |
| BbsI | GAAGAC | 1 cut(s) | 147 |
| BbvI | GCAGC | 4 cut(s) | 41, 208, 337, 365 |
| BcoDI | GTCTC | 1 cut(s) | 389 |
| BfaI | CTAG | 2 cut(s) | 233, 339 |
| BfmI | CTRYAG | 1 cut(s) | 351 |
| BisI | GCNGC | 5 cut(s) | 30, 222, 225, 351, 354 |
| BlsI | GCNGC | 5 cut(s) | 31, 223, 226, 352, 355 |
| BmsI | GCATC | 2 cut(s) | 208, 298 |
| BmtI | GCTAGC | 1 cut(s) | 236 |
| BpiI | GAAGAC | 1 cut(s) | 147 |
| BsaJI | CCNNGG | 1 cut(s) | 13 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 306, 336 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 214, 261 |
| BseDI | CCNNGG | 1 cut(s) | 13 |
| BseGI | GGATG | 2 cut(s) | 223, 270 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 214, 261 |
| BseMII | CTCAG | 1 cut(s) | 163 |
| BseXI | GCAGC | 4 cut(s) | 41, 208, 337, 365 |
| BshFI | GGCC | 1 cut(s) | 227 |
| BslFI | GGGAC | 1 cut(s) | 145 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 214, 261 |
| BsmAI | GTCTC | 1 cut(s) | 389 |
| BsmFI | GGGAC | 1 cut(s) | 145 |
| BsnI | GGCC | 1 cut(s) | 227 |
| BspACI | CCGC | 2 cut(s) | 215, 224 |
| BspANI | GGCC | 1 cut(s) | 227 |
| BspCNI | CTCAG | 1 cut(s) | 162 |
| BspMAI | CTGCAG | 1 cut(s) | 355 |
| BspOI | GCTAGC | 1 cut(s) | 236 |
| BspQI | GCTCTTC | 1 cut(s) | 303 |
| BssECI | CCNNGG | 1 cut(s) | 13 |
| BssT1I | CCWWGG | 1 cut(s) | 13 |
| Bst4CI | ACNGT | 2 cut(s) | 71, 209 |
| Bst6I | CTCTTC | 1 cut(s) | 303 |
| BstC8I | GCNNGC | 1 cut(s) | 234 |
| BstDEI | CTNAG | 2 cut(s) | 149, 365 |
| BstF5I | GGATG | 2 cut(s) | 223, 270 |
| BstMAI | GTCTC | 1 cut(s) | 389 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 221, 233, 238 |
| BstSFI | CTRYAG | 1 cut(s) | 351 |
| BstV1I | GCAGC | 4 cut(s) | 41, 208, 337, 365 |
| BstV2I | GAAGAC | 1 cut(s) | 147 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 107 |
| BsuRI | GGCC | 1 cut(s) | 227 |
| BtsCI | GGATG | 2 cut(s) | 223, 270 |
| Cac8I | GCNNGC | 1 cut(s) | 234 |
| CviJI | RGCY | 9 cut(s) | 5, 104, 203, 227, 232, 247, 296, 350, 356 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 104, 203, 227, 232, 247, 296, 350, 356 |
| DdeI | CTNAG | 2 cut(s) | 149, 365 |
| EaeI | YGGCCR | 1 cut(s) | 225 |
| Eam1104I | CTCTTC | 1 cut(s) | 303 |
| EarI | CTCTTC | 1 cut(s) | 303 |
| Eco130I | CCWWGG | 1 cut(s) | 13 |
| Eco57I | CTGAAG | 1 cut(s) | 151 |
| EcoT14I | CCWWGG | 1 cut(s) | 13 |
| ErhI | CCWWGG | 1 cut(s) | 13 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 149, 181 |
| FaqI | GGGAC | 1 cut(s) | 145 |
| Fnu4HI | GCNGC | 5 cut(s) | 30, 222, 225, 351, 354 |
| FokI | GGATG | 2 cut(s) | 230, 277 |
| Fsp4HI | GCNGC | 5 cut(s) | 30, 222, 225, 351, 354 |
| FspBI | CTAG | 2 cut(s) | 233, 339 |
| GluI | GCNGC | 5 cut(s) | 30, 222, 225, 351, 354 |
| HaeIII | GGCC | 1 cut(s) | 227 |
| HinfI | GANTC | 2 cut(s) | 190, 321 |
| Hpy166II | GTNNAC | 2 cut(s) | 94, 371 |
| Hpy188III | TCNNGA | 1 cut(s) | 305 |
| Hpy8I | GTNNAC | 2 cut(s) | 94, 371 |
| Hpy99I | CGWCG | 1 cut(s) | 306 |
| HpyAV | CCTTC | 1 cut(s) | 155 |
| HpyCH4III | ACNGT | 2 cut(s) | 71, 209 |
| HpyCH4V | TGCA | 2 cut(s) | 183, 353 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 221, 233, 238 |
| HpyF3I | CTNAG | 2 cut(s) | 149, 365 |
| LguI | GCTCTTC | 1 cut(s) | 303 |
| LpnPI | CCDG | 3 cut(s) | 118, 136, 340 |
| Lsp1109I | GCAGC | 4 cut(s) | 41, 208, 337, 365 |
| LweI | GCATC | 2 cut(s) | 208, 298 |
| MaeI | CTAG | 2 cut(s) | 233, 339 |
| MaeIII | GTNAC | 2 cut(s) | 65, 170 |
| MboII | GAAGA | 2 cut(s) | 152, 290 |
| MlyI | GAGTC | 2 cut(s) | 184, 315 |
| MmeI | TCCRAC | 2 cut(s) | 98, 368 |
| MnlI | CCTC | 2 cut(s) | 237, 292 |
| MroXI | GAANNNNTTC | 1 cut(s) | 144 |
| MseI | TTAA | 2 cut(s) | 8, 397 |
| MspA1I | CMGCKG | 2 cut(s) | 215, 350 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 221, 233, 238 |
| NheI | GCTAGC | 1 cut(s) | 232 |
| NmuCI | GTSAC | 2 cut(s) | 65, 170 |
| PciSI | GCTCTTC | 1 cut(s) | 303 |
| PdmI | GAANNNNTTC | 1 cut(s) | 144 |
| PkrI | GCNGC | 5 cut(s) | 31, 223, 226, 352, 355 |
| PleI | GAGTC | 2 cut(s) | 184, 315 |
| PpsI | GAGTC | 2 cut(s) | 184, 315 |
| PstI | CTGCAG | 1 cut(s) | 355 |
| PvuII | CAGCTG | 1 cut(s) | 350 |
| SapI | GCTCTTC | 1 cut(s) | 303 |
| SaqAI | TTAA | 2 cut(s) | 8, 397 |
| SatI | GCNGC | 5 cut(s) | 30, 222, 225, 351, 354 |
| SchI | GAGTC | 2 cut(s) | 184, 315 |
| SfaNI | GCATC | 2 cut(s) | 208, 298 |
| SfcI | CTRYAG | 1 cut(s) | 351 |
| SsiI | CCGC | 2 cut(s) | 215, 224 |
| SspMI | CTAG | 2 cut(s) | 233, 339 |
| StyI | CCWWGG | 1 cut(s) | 13 |
| TaaI | ACNGT | 2 cut(s) | 71, 209 |
| TauI | GCSGC | 1 cut(s) | 227 |
| Tru1I | TTAA | 2 cut(s) | 8, 397 |
| Tru9I | TTAA | 2 cut(s) | 8, 397 |
| TseFI | GTSAC | 2 cut(s) | 65, 170 |
| TseI | GCWGC | 4 cut(s) | 29, 221, 350, 353 |
| Tsp45I | GTSAC | 2 cut(s) | 65, 170 |
| TspDTI | ATGAA | 1 cut(s) | 281 |
| XmnI | GAANNNNTTC | 1 cut(s) | 144 |
| XspI | CTAG | 2 cut(s) | 233, 339 |