FvH4_4g05481

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000093
Physical Location & Seq
Forward (+)
4737532 .. 4739535
2004 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g05481.t1

Sequence Viewer

Length: 1107 bp
ATGTCAGGTTTGTTTTCTAGAAGGATTGCGTCTGCACCAACTTGTCCTATCTGCAACCTTCATGAGGAAACTGTAGAACACTGCCTTCTTTTGTGTCCTTGGGCAGTCCAAACCTGGTTTTCTTCCTCTCTAAATTACAGAATTGATGTCAATAATATAACCACGTTTGACCGGTGGTTGGATGCTATTTCCAAAATGTCAAACCAGTCAAAAGAGGATAGGAACTACCTGCTCACTATGATATCCTTCATCAGTTGGGAAATTTGGAAGAGTAGGTGCAGCTTCATATACCAACACAAAAAGCTTGATCCGATTGGAACTTCACAAAGAGCTTCTCAGTCTAGTGTTGAGTACCTGCATGCAAAAGCCCAGGCAACAACCCTTCATTCCCTCAATCCCAGTAGCCCCATAATCTCCATCTCAAACCAACTCTACCCTCTCCATTATCAAAACCCAACCTCCTCATCAAACCACAGTGACCACACCCCATCACATCAACCTTTTCTTCCTAATGCTAACCATGATCATCAGCCAAGCAATTTTCCCTCCCATCAAATTACTTCCACTCAAACTCATTCCCATTCCCCTAGCCCCACTCTACCACACACTTGGCTGGCCCCGCCTCAAGGAATAATCAAGGTAAACCTGGATGGTGCTTGGAATTCGGAAGATAATAGTGCAGGAATTAGAGTCATTGCAAGAGATTCAGAAGGAAACCTGGTTTCGGGTGCAGCCTCCTCCATTTCAGCCCAATCTTCTATTGAGGCTGAAGCTAAAACGGCTCTTGAAGCTCTATCTCTAGCACAGGCTGGCAATTTCAGTGGAGTTATCTTTGAGTTTGATTCCCAAATTCTAGTCAACACCATCAATAACCCATCGAAAGCCTCACATTGGTTACTCCGGCCAGTCGGTGCACGAAGCAGACGGGCATCAATTTTCTTCTCCTTCTCTTGCTGGAATTGGATTCCACGGAAAGCGAATGAAGCGGCAAACTGCGTCGCTACGCTAGCTCGCCGGCGGATGTGCCCGGAGTCTTGGATTTCCAGACCCCCATCCTTGCTGGTTCATGTCTTGTCTTGGGATGGTCTGCCATGCCCTCCGATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

369

Amino Acids

40.96

Weight (kDa)

8.1

Isoelectric Point (pI)

58.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RVT PF13966 4 - 39 8e-06 zinc-binding in reverse transcriptase
RVT_3 PF13456 215 - 336 5e-19 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000093)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G09490
fragaria_vesca FvH4_1g23791 FvH4_2g01641 FvH4_2g04612 FvH4_2g06831 FvH4_2g07841 FvH4_2g13581 FvH4_2g27220 FvH4_2g30621 FvH4_2g34753 FvH4_3g10392 FvH4_3g24291 FvH4_3g25030 FvH4_3g29361 FvH4_3g31372 FvH4_3g32402 FvH4_3g43651 FvH4_4g03830 FvH4_4g05481 FvH4_4g20431 FvH4_4g21421 FvH4_4g25931 FvH4_5g08801 FvH4_5g21021 FvH4_5g26254 FvH4_5g30931 FvH4_5g31281 FvH4_5g33581 FvH4_5g35622 FvH4_6g02100 FvH4_6g07963 FvH4_6g11620 FvH4_6g16031 FvH4_6g19041 FvH4_6g24211 FvH4_6g24271 FvH4_6g30670 FvH4_6g49540 FvH4_7g25914
malus_domestica MD03G1245200.v1.1 MD04G1168000.v1.1 MD09G1242600.v1.1 MD15G1334000.v1.1 MD17G1165700.v1.1
prunus_persica Prupe.1G073500_v2.0.a1 Prupe.1G283700_v2.0.a1 Prupe.1G524100_v2.0.a1 Prupe.2G022700_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G044300_v2.0.a1 Prupe.2G048800_v2.0.a1 Prupe.2G092000_v2.0.a1 Prupe.2G216500_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.3G103400_v2.0.a1 Prupe.3G143300_v2.0.a1 Prupe.3G190000_v2.0.a1 Prupe.3G219800_v2.0.a1 Prupe.4G177800_v2.0.a1 Prupe.4G261300_v2.0.a1 Prupe.5G044600_v2.0.a1 Prupe.5G067400_v2.0.a1 Prupe.7G083900_v2.0.a1 Prupe.7G120900_v2.0.a1 Prupe.8G032200_v2.0.a1 Prupe.8G036100_v2.0.a1 Prupe.8G042700_v2.0.a1
pyrus_communis pycom01g21710 pycom02g19770 pycom03g05120 pycom05g01370 pycom05g08780 pycom05g10120 pycom07g01370 pycom07g05930 pycom08g15760 pycom08g18090 pycom08g21060 pycom09g03880 pycom10g03870 pycom13g22240 pycom16g05120 pycom16g17170 pycom17g12180 pycom17g16290 pycom17g21230 pycom17g24990 pycom215g00100
rosa_chinensis RchiOBHm_Chr1g0323031 RchiOBHm_Chr1g0324391 RchiOBHm_Chr1g0326401 RchiOBHm_Chr1g0327811 RchiOBHm_Chr1g0332521 RchiOBHm_Chr1g0336501 RchiOBHm_Chr1g0346021 RchiOBHm_Chr1g0347191 RchiOBHm_Chr1g0367181 RchiOBHm_Chr2g0089441 RchiOBHm_Chr2g0115441 RchiOBHm_Chr3g0490691 RchiOBHm_Chr4g0395251 RchiOBHm_Chr4g0398081 RchiOBHm_Chr4g0409451 RchiOBHm_Chr4g0413041 RchiOBHm_Chr4g0415471 RchiOBHm_Chr4g0420961 RchiOBHm_Chr5g0040301 RchiOBHm_Chr5g0070651 RchiOBHm_Chr6g0263011 RchiOBHm_Chr6g0270721 RchiOBHm_Chr6g0277111 RchiOBHm_Chr7g0179771 RchiOBHm_Chr7g0223051 RchiOBHm_Chr7g0225031 RchiOBHm_Chr7g0225091
rosa_laevigata RLG00000001668 RLG00000001672 RLG00000001676 RLG00000007762 RLG00000008994 RLG00000011117 RLG00000013729 RLG00000013839 RLG00000014759 RLG00000016638 RLG00000018535 RLG00000018614 RLG00000018646 RLG00000020679 RLG00000023337 RLG00000029348 RLG00000035891 RLG00000035912
rosa_multiflora Rmu_co8152500.1_g000001 Rmu_co8203314.1_g000001 Rmu_co8383183.1_g000001 Rmu_sc0000293.1_g000033 Rmu_sc0000367.1_g000226 Rmu_sc0000512.1_g000023 Rmu_sc0000594.1_g000059 Rmu_sc0000654.1_g000022 Rmu_sc0000654.1_g000047 Rmu_sc0000706.1_g000037 Rmu_sc0001348.1_g000008 Rmu_sc0001385.1_g000024 Rmu_sc0001405.1_g000002 Rmu_sc0001521.1_g000048 Rmu_sc0001932.1_g000008 Rmu_sc0001932.1_g000009 Rmu_sc0002535.1_g000011 Rmu_sc0002908.1_g000019 Rmu_sc0003709.1_g000004 Rmu_sc0003882.1_g000054 Rmu_sc0004035.1_g000007 Rmu_sc0004041.1_g000007 Rmu_sc0004288.1_g000011 Rmu_sc0004569.1_g000004 Rmu_sc0004677.1_g000016 Rmu_sc0004834.1_g000010 Rmu_sc0005193.1_g000008 Rmu_sc0005354.1_g000009 Rmu_sc0006514.1_g000021 Rmu_sc0006691.1_g000001 Rmu_sc0006888.1_g000021 Rmu_sc0006889.1_g000013 Rmu_sc0008096.1_g000017 Rmu_sc0008378.1_g000003 Rmu_sc0009127.1_g000005 Rmu_sc0009191.1_g000016 Rmu_sc0009687.1_g000018 Rmu_sc0009709.1_g000005 Rmu_sc0009880.1_g000015 Rmu_sc0011710.1_g000001 Rmu_sc0012615.1_g000004 Rmu_sc0016091.1_g000002 Rmu_sc0022339.1_g000006 Rmu_sc0026537.1_g000002 Rmu_sc0027689.1_g000002 Rmu_sc0036222.1_g000001 Rmu_sc0040890.1_g000001 Rmu_ssc0000148.1_g000006 Rmu_ssc0000151.1_g000017 Rmu_ssc0000404.1_g000018 Rmu_ssc0000449.1_g000009
rosa_roxburghii Rroxscaffold_1G00017760 Rroxscaffold_1G00059150 Rroxscaffold_2G00142560 Rroxscaffold_3G00220440 Rroxscaffold_3G00231700 Rroxscaffold_3G00232400 Rroxscaffold_3G00274510 Rroxscaffold_4G00288790 Rroxscaffold_4G00305680 Rroxscaffold_4G00314880 Rroxscaffold_4G00314900 Rroxscaffold_5G00334590 Rroxscaffold_6G00394110 Rroxscaffold_6G00415860 Rroxscaffold_7G00168240 Rroxscaffold_7G00204400 Rroxscaffold_7G00207840
rosa_rugosa Rorug01G0034900 Rorug02G0079500 Rorug02G0229000 Rorug02G0229100 Rorug02G0291400 Rorug02G0298800 Rorug03G0046400 Rorug03G0064700 Rorug03G0077300 Rorug03G0199000 Rorug03G0200400 Rorug04G0205200 Rorug05G0025400 Rorug05G0127400 Rorug05G0192100 Rorug05G0453400 Rorug05G0538300 Rorug06G0035200 Rorug06G0241000 Rorug06G0268300 Rorug07G0120300 Rorug07G0145000 Rorug07G0209100 Rorug07G0240500 Rorug07G0271700
rosa_samantha Rh1AG179100 Rh1BG106900 Rh1BG163400 Rh1BG163500 Rh1BG323500 Rh2CG447900 Rh2DG503700 Rh3AG293600 Rh3CG229100 Rh3DG221500 Rh4AG106000 Rh4BG267700 Rh4CG062500 Rh4CG090100 Rh4CG114800 Rh5AG038400 Rh5BG395400 Rh5CG441700 Rh5CG572000 Rh6AG222400 Rh6AG264500 Rh6BG137400 Rh6BG225700 Rh6CG144300 Rh6DG087600 Rh6DG096000 Rh6DG362400 Rh6DG390200 Rh7AG207500 Rh7AG324700 Rh7AG388800 Rh7AG437100 Rh7BG019000 Rh7BG374600 Rh7CG028700 Rh7CG341500 Rh7CG408000 Rh7CG408300 Rh7DG354600
rosa_wichuraiana Rw0G009630 Rw0G012170 Rw4G022700 Rw5G028420 Rw5G029490 Rw6G007220 Rw6G007410 Rw6G017880 Rw7G012440 Rw7G021830 Rw7G027490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 237, 363
AciI CCGC 3 cut(s) 620, 986, 1018
AclWI GGATC 1 cut(s) 302
AcoI YGGCCR 1 cut(s) 902
AcsI RAATTY 3 cut(s) 261, 661, 849
AcuI CTGAAG 1 cut(s) 789
AfaI GTAC 1 cut(s) 353
AfiI CCNNNNNNNGG 5 cut(s) 64, 178, 626, 724, 891
AgeI ACCGGT 1 cut(s) 171
AgsI TTSAA 1 cut(s) 788
AjnI CCWGG 4 cut(s) 113, 369, 645, 717
AluBI AGCT 6 cut(s) 282, 304, 332, 773, 791, 1010
AluI AGCT 6 cut(s) 282, 304, 332, 773, 791, 1010
Alw21I GWGCWC 1 cut(s) 916
Alw44I GTGCAC 1 cut(s) 912
AlwI GGATC 1 cut(s) 302
AoxI GGCC 2 cut(s) 615, 902
ApaLI GTGCAC 1 cut(s) 912
ApeKI GCWGC 2 cut(s) 279, 731
ApoI RAATTY 3 cut(s) 261, 661, 849
AsiGI ACCGGT 1 cut(s) 171
AspS9I GGNCC 1 cut(s) 616
AsuC2I CCSGG 1 cut(s) 1028
AsuNHI GCTAGC 1 cut(s) 1006
BaeGI GKGCMC 2 cut(s) 916, 1028
Bbv12I GWGCWC 1 cut(s) 916
BbvI GCAGC 2 cut(s) 291, 743
BccI CCATC 8 cut(s) 425, 496, 558, 644, 872, 883, 1060, 1076
BceAI ACGGC 1 cut(s) 795
BciT130I CCWGG 4 cut(s) 115, 371, 647, 719
BclI TGATCA 1 cut(s) 523
BcnI CCSGG 1 cut(s) 1028
BfaI CTAG 6 cut(s) 18, 342, 588, 800, 854, 1007
BfmI CTRYAG 1 cut(s) 72
BfuAI ACCTGC 2 cut(s) 237, 363
BisI GCNGC 3 cut(s) 280, 732, 987
BlsI GCNGC 3 cut(s) 281, 733, 988
Bme1390I CCNGG 5 cut(s) 115, 371, 647, 719, 1028
BmgT120I GGNCC 1 cut(s) 616
BmiI GGNNCC 1 cut(s) 618
BmrFI CCNGG 5 cut(s) 115, 371, 647, 719, 1028
BmrI ACTGGG 1 cut(s) 393
BmsI GCATC 2 cut(s) 172, 938
BmtI GCTAGC 1 cut(s) 1010
BmuI ACTGGG 1 cut(s) 393
BpuEI CTTGAG 1 cut(s) 609
BpuMI CCSGG 1 cut(s) 1028
BsaJI CCNNGG 3 cut(s) 98, 369, 968
BsaWI WCCGGW 1 cut(s) 171
BsaXI ACNNNNNCTCC 2 cut(s) 443, 473
Bsc4I CCNNNNNNNGG 5 cut(s) 64, 178, 626, 724, 891
Bse118I RCCGGY 2 cut(s) 171, 1014
Bse1I ACTGG 3 cut(s) 205, 399, 905
Bse3DI GCAATG 1 cut(s) 693
BseBI CCWGG 4 cut(s) 115, 371, 647, 719
BseDI CCNNGG 3 cut(s) 98, 369, 968
BseGI GGATG 5 cut(s) 187, 655, 1026, 1052, 1087
BseLI CCNNNNNNNGG 5 cut(s) 64, 178, 626, 724, 891
BseMI GCAATG 1 cut(s) 693
BseMII CTCAG 1 cut(s) 350
BseNI ACTGG 3 cut(s) 205, 399, 905
BseRI GAGGAG 2 cut(s) 451, 727
BseSI GKGCMC 2 cut(s) 916, 1028
BseXI GCAGC 2 cut(s) 291, 743
BsgI GTGCAG 4 cut(s) 18, 298, 699, 750
BshFI GGCC 2 cut(s) 617, 904
BshTI ACCGGT 1 cut(s) 171
BsiHKAI GWGCWC 1 cut(s) 916
BsiSI CCGG 4 cut(s) 172, 901, 1015, 1028
BslI CCNNNNNNNGG 5 cut(s) 64, 178, 626, 724, 891
BsnI GGCC 2 cut(s) 617, 904
Bsp1286I GDGCHC 2 cut(s) 916, 1028
Bsp143I GATC 2 cut(s) 307, 523
BspACI CCGC 3 cut(s) 620, 986, 1018
BspANI GGCC 2 cut(s) 617, 904
BspCNI CTCAG 1 cut(s) 349
BspHI TCATGA 1 cut(s) 61
BspLI GGNNCC 1 cut(s) 618
BspMI ACCTGC 2 cut(s) 237, 363
BspOI GCTAGC 1 cut(s) 1010
BspPI GGATC 1 cut(s) 302
BsrDI GCAATG 1 cut(s) 693
BsrFI RCCGGY 2 cut(s) 171, 1014
BsrI ACTGG 3 cut(s) 205, 399, 905
BssAI RCCGGY 2 cut(s) 171, 1014
BssECI CCNNGG 3 cut(s) 98, 369, 968
BssMI GATC 2 cut(s) 307, 523
BssT1I CCWWGG 1 cut(s) 98
Bst2UI CCWGG 4 cut(s) 115, 371, 647, 719
Bst4CI ACNGT 2 cut(s) 73, 476
Bst6I CTCTTC 1 cut(s) 263
BstC8I GCNNGC 6 cut(s) 360, 615, 811, 1008, 1012, 1016
BstDEI CTNAG 1 cut(s) 336
BstDSI CCRYGG 1 cut(s) 968
BstENI CCTNNNNNAGG 1 cut(s) 62
BstF5I GGATG 5 cut(s) 187, 655, 1026, 1052, 1087
BstKTI GATC 2 cut(s) 310, 526
BstMBI GATC 2 cut(s) 307, 523
BstMWI GCNNNNNNNGC 5 cut(s) 619, 779, 788, 983, 1007
BstNI CCWGG 4 cut(s) 115, 371, 647, 719
BstNSI RCATGY 1 cut(s) 362
BstSCI CCNGG 5 cut(s) 113, 369, 645, 717, 1026
BstSFI CTRYAG 1 cut(s) 72
BstSLI GKGCMC 2 cut(s) 916, 1028
BstV1I GCAGC 2 cut(s) 291, 743
BstXI CCANNNNNNTGG 1 cut(s) 609
BsuRI GGCC 2 cut(s) 617, 904
BtgI CCRYGG 1 cut(s) 968
BtsCI GGATG 5 cut(s) 187, 655, 1026, 1052, 1087
BtsI GCAGTG 1 cut(s) 79
BtsIMutI CAGTG 3 cut(s) 79, 481, 826
BveI ACCTGC 2 cut(s) 237, 363
Cac8I GCNNGC 6 cut(s) 360, 615, 811, 1008, 1012, 1016
CciI TCATGA 1 cut(s) 61
Cfr10I RCCGGY 2 cut(s) 171, 1014
Cfr13I GGNCC 1 cut(s) 616
CseI GACGC 2 cut(s) 18, 985
CsiI ACCWGGT 2 cut(s) 113, 717
Csp6I GTAC 1 cut(s) 352
CspAI ACCGGT 1 cut(s) 171
CspCI CAANNNNNGTGG 2 cut(s) 802, 837
CviAII CATG 5 cut(s) 62, 359, 521, 1067, 1092
CviQI GTAC 1 cut(s) 352
DdeI CTNAG 1 cut(s) 336
DpnI GATC 2 cut(s) 309, 525
DpnII GATC 2 cut(s) 307, 523
EaeI YGGCCR 1 cut(s) 902
Eam1104I CTCTTC 1 cut(s) 263
EarI CTCTTC 1 cut(s) 263
EciI GGCGGA 1 cut(s) 1033
Eco130I CCWWGG 1 cut(s) 98
Eco32I GATATC 1 cut(s) 243
Eco57I CTGAAG 1 cut(s) 789
EcoNI CCTNNNNNAGG 1 cut(s) 62
EcoRI GAATTC 1 cut(s) 661
EcoRII CCWGG 4 cut(s) 113, 369, 645, 717
EcoRV GATATC 1 cut(s) 243
EcoT14I CCWWGG 1 cut(s) 98
ErhI CCWWGG 1 cut(s) 98
FaeI CATG 5 cut(s) 65, 362, 524, 1070, 1095
FatI CATG 5 cut(s) 61, 358, 520, 1066, 1091
FauI CCCGC 1 cut(s) 627
FbaI TGATCA 1 cut(s) 523
Fnu4HI GCNGC 3 cut(s) 280, 732, 987
FokI GGATG 5 cut(s) 194, 662, 1033, 1039, 1094
Fsp4HI GCNGC 3 cut(s) 280, 732, 987
FspBI CTAG 6 cut(s) 18, 342, 588, 800, 854, 1007
GluI GCNGC 3 cut(s) 280, 732, 987
HaeIII GGCC 2 cut(s) 617, 904
HapII CCGG 4 cut(s) 172, 901, 1015, 1028
HgaI GACGC 2 cut(s) 18, 985
Hin1II CATG 5 cut(s) 65, 362, 524, 1070, 1095
HincII GTYRAC 1 cut(s) 859
HindII GTYRAC 1 cut(s) 859
HindIII AAGCTT 1 cut(s) 302
HinfI GANTC 5 cut(s) 690, 704, 842, 964, 1031
HpaII CCGG 4 cut(s) 172, 901, 1015, 1028
Hpy166II GTNNAC 3 cut(s) 643, 859, 914
Hpy188I TCNGA 4 cut(s) 312, 667, 709, 1101
Hpy188III TCNNGA 4 cut(s) 18, 62, 785, 1044
Hpy8I GTNNAC 3 cut(s) 643, 859, 914
Hpy99I CGWCG 1 cut(s) 1001
HpyAV CCTTC 7 cut(s) 15, 68, 95, 256, 392, 704, 955
HpyCH4III ACNGT 2 cut(s) 73, 476
HpyCH4IV ACGT 1 cut(s) 164
HpyCH4V TGCA 9 cut(s) 35, 54, 279, 358, 362, 680, 698, 731, 914
HpyF10VI GCNNNNNNNGC 5 cut(s) 619, 779, 788, 983, 1007
HpyF3I CTNAG 1 cut(s) 336
HpySE526I ACGT 1 cut(s) 164
Hsp92II CATG 5 cut(s) 65, 362, 524, 1070, 1095
KroI GCCGGC 1 cut(s) 1014
KroNI GCCGGC 1 cut(s) 1016
Ksp22I TGATCA 1 cut(s) 523
Kzo9I GATC 2 cut(s) 307, 523
Lsp1109I GCAGC 2 cut(s) 291, 743
LweI GCATC 2 cut(s) 172, 938
MabI ACCWGGT 2 cut(s) 113, 717
MaeI CTAG 6 cut(s) 18, 342, 588, 800, 854, 1007
MaeII ACGT 1 cut(s) 164
MaeIII GTNAC 2 cut(s) 476, 894
MalI GATC 2 cut(s) 309, 525
MboI GATC 2 cut(s) 307, 523
MboII GAAGA 6 cut(s) 114, 280, 497, 680, 747, 931
MhlI GDGCHC 2 cut(s) 916, 1028
MlyI GAGTC 2 cut(s) 699, 1040
MmeI TCCRAC 1 cut(s) 159
MreI CGCCGGCG 1 cut(s) 1014
MroNI GCCGGC 1 cut(s) 1014
MspI CCGG 4 cut(s) 172, 901, 1015, 1028
MspR9I CCNGG 5 cut(s) 115, 371, 647, 719, 1028
MvaI CCWGG 4 cut(s) 115, 371, 647, 719
MwoI GCNNNNNNNGC 5 cut(s) 619, 779, 788, 983, 1007
NaeI GCCGGC 1 cut(s) 1016
NciI CCSGG 1 cut(s) 1028
NdeII GATC 2 cut(s) 307, 523
NgoMIV GCCGGC 1 cut(s) 1014
NheI GCTAGC 1 cut(s) 1006
NlaIII CATG 5 cut(s) 65, 362, 524, 1070, 1095
NlaIV GGNNCC 1 cut(s) 618
NmuCI GTSAC 1 cut(s) 476
NspI RCATGY 1 cut(s) 362
PaeI GCATGC 1 cut(s) 362
PagI TCATGA 1 cut(s) 61
PdiI GCCGGC 1 cut(s) 1016
PfeI GAWTC 3 cut(s) 704, 842, 964
PinAI ACCGGT 1 cut(s) 171
PkrI GCNGC 3 cut(s) 281, 733, 988
PleI GAGTC 2 cut(s) 698, 1039
PpsI GAGTC 2 cut(s) 698, 1039
Psp6I CCWGG 4 cut(s) 113, 369, 645, 717
PspGI CCWGG 4 cut(s) 113, 369, 645, 717
PspN4I GGNNCC 1 cut(s) 618
PspPI GGNCC 1 cut(s) 616
RsaI GTAC 1 cut(s) 353
RsaNI GTAC 1 cut(s) 352
SatI GCNGC 3 cut(s) 280, 732, 987
Sau3AI GATC 2 cut(s) 307, 523
Sau96I GGNCC 1 cut(s) 616
SchI GAGTC 2 cut(s) 699, 1040
ScrFI CCNGG 5 cut(s) 115, 371, 647, 719, 1028
SduI GDGCHC 2 cut(s) 916, 1028
SexAI ACCWGGT 2 cut(s) 113, 717
SfaNI GCATC 2 cut(s) 172, 938
SfcI CTRYAG 1 cut(s) 72
SgrAI CRCCGGYG 1 cut(s) 1014
SmlI CTYRAG 1 cut(s) 624
SmoI CTYRAG 1 cut(s) 624
SphI GCATGC 1 cut(s) 362
SsiI CCGC 3 cut(s) 620, 986, 1018
SspMI CTAG 6 cut(s) 18, 342, 588, 800, 854, 1007
StyD4I CCNGG 5 cut(s) 113, 369, 645, 717, 1026
StyI CCWWGG 1 cut(s) 98
TaaI ACNGT 2 cut(s) 73, 476
TaiI ACGT 1 cut(s) 167
TaqI TCGA 1 cut(s) 878
TauI GCSGC 1 cut(s) 989
TfiI GAWTC 3 cut(s) 704, 842, 964
TscAI CASTG 3 cut(s) 86, 481, 826
TseFI GTSAC 1 cut(s) 476
TseI GCWGC 2 cut(s) 279, 731
Tsp45I GTSAC 1 cut(s) 476
TspDTI ATGAA 6 cut(s) 50, 238, 274, 374, 996, 1055
TspGWI ACGGA 1 cut(s) 985
TspRI CASTG 3 cut(s) 86, 481, 826
VneI GTGCAC 1 cut(s) 912
XagI CCTNNNNNAGG 1 cut(s) 62
XapI RAATTY 3 cut(s) 261, 661, 849
XbaI TCTAGA 1 cut(s) 17
XceI RCATGY 1 cut(s) 362
XspI CTAG 6 cut(s) 18, 342, 588, 800, 854, 1007
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.