Prupe.8G042700_v2.0.a1

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000093
Physical Location & Seq
Forward (+)
4443419 .. 4446678
3260 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G042700.1

Sequence Viewer

Length: 1158 bp
ATGTCAGATCGACTGGTATGGCCCCGAGATAGAAATGGCTGCTACTCTGTGAAATCTGGGTATCATTGGCTTCATAGTGTGAACGTTGTCAGGCGCCTTCATCACCCTTCTTCGTCTACGACCGTGGACACCGATTGTTGGAAAATGATGTGGAAAACCAATGCCCCCCCCCAAAAAAAAATAAAAACCTTCTTGTGGCGAGCGCTTCGGAATGCTATTGCTGCATTTGTTAAACTCTTTATAAGGAAATGCTCCCAGACTCCTCTCTACCCTCTGTGTAATTGCTACCCTGAGACTGTGAAGCATATGCTTCTTCTCTGCTCATGGGTCGAGACGATTCGGTTTGGCAGCCCATTAAGTCTTAGAGTAGATAAATGTTCTATTTCTACTCTGGATGTATGGCTATGCAATACGTTCTTTACTATTGGCACAGAGCAGAATGATGGGGATGGGATCAAAACCACAATATGCTTCCTTTGTTGGCACATATGGAAGGAAAGGTGCAAGGCAGTAATAGAACAATGTTCTCCCTCCTCTAGGGACACTATCCAAAGGGCTTCAAACGTAGCTAATGAGTTCCTTTCCTCCAGGGAGCGCTACCAAGCGAACCACAATCCTAGGCCCAAAAACTTGGCGCATAATACGGCATGGTCGGCCCCTCTCAGCCCCTTGGTGAAATTAAACGTGGATGCGGCTTGGGACCCAATCTCCAAATCTGTAGGTATTGGTATGGTGGTCAGGGACCACAATGGTCAGTTCTTGGAGGGTAAATCTTTGCTGGCTCAGGCGGACTCGACTCTACTGGCTGAATGCTTAGCGTGCCTAGAAAGGTGCAGATTTGCTTCGAATCGGGGTGATCAACTGGTGTCTTTTGAGTTTGATTGCCTTGAAGCCGTTAAAAGTATCAATGGTGACATCTCTCGGGGGAAGTGGGAGATTTACCCAATCCTTAGTAACATAAGAGATTTTCTCTTGGCGTTCAGGTCTTGTAGCTGGACTTGGATTCGCAGAATCGCAAATGAGGCCGCAGATCACTTGGCACAGCTTGCTAAGTCGAGGATGTGCAACGAAGTTTGGGCTTATAGGCCTCCATCCTCTCTCACGTTCATCTTGAATAAGGATGGCCTTCCGTGTCCTCCAAACAAATGTTTAGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

386

Amino Acids

43.93

Weight (kDa)

9.08

Isoelectric Point (pI)

41.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000093)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G09490
fragaria_vesca FvH4_1g23791 FvH4_2g01641 FvH4_2g04612 FvH4_2g06831 FvH4_2g07841 FvH4_2g13581 FvH4_2g27220 FvH4_2g30621 FvH4_2g34753 FvH4_3g10392 FvH4_3g24291 FvH4_3g25030 FvH4_3g29361 FvH4_3g31372 FvH4_3g32402 FvH4_3g43651 FvH4_4g03830 FvH4_4g05481 FvH4_4g20431 FvH4_4g21421 FvH4_4g25931 FvH4_5g08801 FvH4_5g21021 FvH4_5g26254 FvH4_5g30931 FvH4_5g31281 FvH4_5g33581 FvH4_5g35622 FvH4_6g02100 FvH4_6g07963 FvH4_6g11620 FvH4_6g16031 FvH4_6g19041 FvH4_6g24211 FvH4_6g24271 FvH4_6g30670 FvH4_6g49540 FvH4_7g25914
malus_domestica MD03G1245200.v1.1 MD04G1168000.v1.1 MD09G1242600.v1.1 MD15G1334000.v1.1 MD17G1165700.v1.1
prunus_persica Prupe.1G073500_v2.0.a1 Prupe.1G283700_v2.0.a1 Prupe.1G524100_v2.0.a1 Prupe.2G022700_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G044300_v2.0.a1 Prupe.2G048800_v2.0.a1 Prupe.2G092000_v2.0.a1 Prupe.2G216500_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.3G103400_v2.0.a1 Prupe.3G143300_v2.0.a1 Prupe.3G190000_v2.0.a1 Prupe.3G219800_v2.0.a1 Prupe.4G177800_v2.0.a1 Prupe.4G261300_v2.0.a1 Prupe.5G044600_v2.0.a1 Prupe.5G067400_v2.0.a1 Prupe.7G083900_v2.0.a1 Prupe.7G120900_v2.0.a1 Prupe.8G032200_v2.0.a1 Prupe.8G036100_v2.0.a1 Prupe.8G042700_v2.0.a1
pyrus_communis pycom01g21710 pycom02g19770 pycom03g05120 pycom05g01370 pycom05g08780 pycom05g10120 pycom07g01370 pycom07g05930 pycom08g15760 pycom08g18090 pycom08g21060 pycom09g03880 pycom10g03870 pycom13g22240 pycom16g05120 pycom16g17170 pycom17g12180 pycom17g16290 pycom17g21230 pycom17g24990 pycom215g00100
rosa_chinensis RchiOBHm_Chr1g0323031 RchiOBHm_Chr1g0324391 RchiOBHm_Chr1g0326401 RchiOBHm_Chr1g0327811 RchiOBHm_Chr1g0332521 RchiOBHm_Chr1g0336501 RchiOBHm_Chr1g0346021 RchiOBHm_Chr1g0347191 RchiOBHm_Chr1g0367181 RchiOBHm_Chr2g0089441 RchiOBHm_Chr2g0115441 RchiOBHm_Chr3g0490691 RchiOBHm_Chr4g0395251 RchiOBHm_Chr4g0398081 RchiOBHm_Chr4g0409451 RchiOBHm_Chr4g0413041 RchiOBHm_Chr4g0415471 RchiOBHm_Chr4g0420961 RchiOBHm_Chr5g0040301 RchiOBHm_Chr5g0070651 RchiOBHm_Chr6g0263011 RchiOBHm_Chr6g0270721 RchiOBHm_Chr6g0277111 RchiOBHm_Chr7g0179771 RchiOBHm_Chr7g0223051 RchiOBHm_Chr7g0225031 RchiOBHm_Chr7g0225091
rosa_laevigata RLG00000001668 RLG00000001672 RLG00000001676 RLG00000007762 RLG00000008994 RLG00000011117 RLG00000013729 RLG00000013839 RLG00000014759 RLG00000016638 RLG00000018535 RLG00000018614 RLG00000018646 RLG00000020679 RLG00000023337 RLG00000029348 RLG00000035891 RLG00000035912
rosa_multiflora Rmu_co8152500.1_g000001 Rmu_co8203314.1_g000001 Rmu_co8383183.1_g000001 Rmu_sc0000293.1_g000033 Rmu_sc0000367.1_g000226 Rmu_sc0000512.1_g000023 Rmu_sc0000594.1_g000059 Rmu_sc0000654.1_g000022 Rmu_sc0000654.1_g000047 Rmu_sc0000706.1_g000037 Rmu_sc0001348.1_g000008 Rmu_sc0001385.1_g000024 Rmu_sc0001405.1_g000002 Rmu_sc0001521.1_g000048 Rmu_sc0001932.1_g000008 Rmu_sc0001932.1_g000009 Rmu_sc0002535.1_g000011 Rmu_sc0002908.1_g000019 Rmu_sc0003709.1_g000004 Rmu_sc0003882.1_g000054 Rmu_sc0004035.1_g000007 Rmu_sc0004041.1_g000007 Rmu_sc0004288.1_g000011 Rmu_sc0004569.1_g000004 Rmu_sc0004677.1_g000016 Rmu_sc0004834.1_g000010 Rmu_sc0005193.1_g000008 Rmu_sc0005354.1_g000009 Rmu_sc0006514.1_g000021 Rmu_sc0006691.1_g000001 Rmu_sc0006888.1_g000021 Rmu_sc0006889.1_g000013 Rmu_sc0008096.1_g000017 Rmu_sc0008378.1_g000003 Rmu_sc0009127.1_g000005 Rmu_sc0009191.1_g000016 Rmu_sc0009687.1_g000018 Rmu_sc0009709.1_g000005 Rmu_sc0009880.1_g000015 Rmu_sc0011710.1_g000001 Rmu_sc0012615.1_g000004 Rmu_sc0016091.1_g000002 Rmu_sc0022339.1_g000006 Rmu_sc0026537.1_g000002 Rmu_sc0027689.1_g000002 Rmu_sc0036222.1_g000001 Rmu_sc0040890.1_g000001 Rmu_ssc0000148.1_g000006 Rmu_ssc0000151.1_g000017 Rmu_ssc0000404.1_g000018 Rmu_ssc0000449.1_g000009
rosa_roxburghii Rroxscaffold_1G00017760 Rroxscaffold_1G00059150 Rroxscaffold_2G00142560 Rroxscaffold_3G00220440 Rroxscaffold_3G00231700 Rroxscaffold_3G00232400 Rroxscaffold_3G00274510 Rroxscaffold_4G00288790 Rroxscaffold_4G00305680 Rroxscaffold_4G00314880 Rroxscaffold_4G00314900 Rroxscaffold_5G00334590 Rroxscaffold_6G00394110 Rroxscaffold_6G00415860 Rroxscaffold_7G00168240 Rroxscaffold_7G00204400 Rroxscaffold_7G00207840
rosa_rugosa Rorug01G0034900 Rorug02G0079500 Rorug02G0229000 Rorug02G0229100 Rorug02G0291400 Rorug02G0298800 Rorug03G0046400 Rorug03G0064700 Rorug03G0077300 Rorug03G0199000 Rorug03G0200400 Rorug04G0205200 Rorug05G0025400 Rorug05G0127400 Rorug05G0192100 Rorug05G0453400 Rorug05G0538300 Rorug06G0035200 Rorug06G0241000 Rorug06G0268300 Rorug07G0120300 Rorug07G0145000 Rorug07G0209100 Rorug07G0240500 Rorug07G0271700
rosa_samantha Rh1AG179100 Rh1BG106900 Rh1BG163400 Rh1BG163500 Rh1BG323500 Rh2CG447900 Rh2DG503700 Rh3AG293600 Rh3CG229100 Rh3DG221500 Rh4AG106000 Rh4BG267700 Rh4CG062500 Rh4CG090100 Rh4CG114800 Rh5AG038400 Rh5BG395400 Rh5CG441700 Rh5CG572000 Rh6AG222400 Rh6AG264500 Rh6BG137400 Rh6BG225700 Rh6CG144300 Rh6DG087600 Rh6DG096000 Rh6DG362400 Rh6DG390200 Rh7AG207500 Rh7AG324700 Rh7AG388800 Rh7AG437100 Rh7BG019000 Rh7BG374600 Rh7CG028700 Rh7CG341500 Rh7CG408000 Rh7CG408300 Rh7DG354600
rosa_wichuraiana Rw0G009630 Rw0G012170 Rw4G022700 Rw5G028420 Rw5G029490 Rw6G007220 Rw6G007410 Rw6G017880 Rw7G012440 Rw7G021830 Rw7G027490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 242
AccB1I GGYRCC 1 cut(s) 93
AccI GTMKAC 1 cut(s) 116
AciI CCGC 3 cut(s) 692, 788, 1026
AclI AACGTT 1 cut(s) 84
AclWI GGATC 1 cut(s) 461
AcyI GRCGYC 1 cut(s) 94
AfeI AGCGCT 2 cut(s) 204, 596
AfiI CCNNNNNNNGG 3 cut(s) 138, 195, 537
AgsI TTSAA 3 cut(s) 561, 890, 1114
AjnI CCWGG 1 cut(s) 587
AluBI AGCT 3 cut(s) 569, 993, 1045
AluI AGCT 3 cut(s) 569, 993, 1045
Alw26I GTCTC 2 cut(s) 287, 326
AlwI GGATC 1 cut(s) 461
Ama87I CYCGRG 2 cut(s) 24, 921
Aor51HI AGCGCT 2 cut(s) 204, 596
AoxI GGCC 6 cut(s) 20, 620, 654, 1023, 1085, 1123
ApeKI GCWGC 3 cut(s) 39, 221, 348
ArsI GACNNNNNNTTYG 1 cut(s) 1137
AspA2I CCTAGG 1 cut(s) 617
AspLEI GCGC 4 cut(s) 96, 205, 597, 637
AspS9I GGNCC 5 cut(s) 21, 621, 655, 700, 742
AsuHPI GGTGA 4 cut(s) 95, 685, 866, 923
AsuII TTCGAA 1 cut(s) 845
AvaI CYCGRG 2 cut(s) 24, 921
AvaII GGWCC 2 cut(s) 700, 742
AvrII CCTAGG 1 cut(s) 617
BanI GGYRCC 1 cut(s) 93
BbvI GCAGC 3 cut(s) 26, 208, 360
BccI CCATC 4 cut(s) 437, 443, 1099, 1115
BceAI ACGGC 2 cut(s) 660, 878
BciT130I CCWGG 1 cut(s) 589
BclI TGATCA 1 cut(s) 856
BcoDI GTCTC 2 cut(s) 287, 326
BfaI CTAG 3 cut(s) 537, 618, 824
BfmI CTRYAG 1 cut(s) 717
BfoI RGCGCY 3 cut(s) 97, 206, 598
BisI GCNGC 5 cut(s) 40, 222, 349, 693, 1026
BlnI CCTAGG 1 cut(s) 617
BlpI GCTNAGC 1 cut(s) 814
BlsI GCNGC 5 cut(s) 41, 223, 350, 694, 1027
Bme1390I CCNGG 1 cut(s) 589
Bme18I GGWCC 2 cut(s) 700, 742
BmeT110I CYCGRG 2 cut(s) 24, 921
BmgT120I GGNCC 5 cut(s) 21, 621, 655, 700, 742
BmiI GGNNCC 6 cut(s) 23, 95, 657, 701, 702, 743
BmrFI CCNGG 1 cut(s) 589
BmsI GCATC 1 cut(s) 679
BplI GAGNNNNNCTC 2 cut(s) 954, 986
BpmI CTGGAG 1 cut(s) 571
Bpu10I CCTNAGC 1 cut(s) 783
Bpu1102I GCTNAGC 1 cut(s) 814
Bpu14I TTCGAA 1 cut(s) 845
BsaHI GRCGYC 1 cut(s) 94
BsaJI CCNNGG 4 cut(s) 123, 588, 617, 669
BsaXI ACNNNNNCTCC 2 cut(s) 692, 722
Bsc4I CCNNNNNNNGG 3 cut(s) 138, 195, 537
Bse1I ACTGG 3 cut(s) 18, 807, 867
BseBI CCWGG 1 cut(s) 589
BseDI CCNNGG 4 cut(s) 123, 588, 617, 669
BseGI GGATG 6 cut(s) 400, 454, 694, 1065, 1091, 1126
BseLI CCNNNNNNNGG 3 cut(s) 138, 195, 537
BseMII CTCAG 3 cut(s) 282, 676, 797
BseNI ACTGG 3 cut(s) 18, 807, 867
BseRI GAGGAG 2 cut(s) 252, 523
BseXI GCAGC 3 cut(s) 26, 208, 360
BsgI GTGCAG 1 cut(s) 853
Bsh1285I CGRYCG 1 cut(s) 123
BshFI GGCC 6 cut(s) 22, 622, 656, 1025, 1087, 1125
BshNI GGYRCC 1 cut(s) 93
BsiEI CGRYCG 1 cut(s) 123
BsiHKCI CYCGRG 2 cut(s) 24, 921
BslFI GGGAC 3 cut(s) 554, 713, 755
BslI CCNNNNNNNGG 3 cut(s) 138, 195, 537
BsmAI GTCTC 2 cut(s) 287, 326
BsmBI CGTCTC 1 cut(s) 326
BsmFI GGGAC 3 cut(s) 554, 713, 755
BsmI GAATGC 2 cut(s) 217, 815
BsnI GGCC 6 cut(s) 22, 622, 656, 1025, 1087, 1125
BsoBI CYCGRG 2 cut(s) 24, 921
Bsp119I TTCGAA 1 cut(s) 845
Bsp143I GATC 4 cut(s) 7, 453, 856, 1030
Bsp1720I GCTNAGC 1 cut(s) 814
BspACI CCGC 3 cut(s) 692, 788, 1026
BspANI GGCC 6 cut(s) 22, 622, 656, 1025, 1087, 1125
BspCNI CTCAG 3 cut(s) 283, 675, 796
BspLI GGNNCC 6 cut(s) 23, 95, 657, 701, 702, 743
BspPI GGATC 1 cut(s) 461
BspT104I TTCGAA 1 cut(s) 845
BspT107I GGYRCC 1 cut(s) 93
BsrI ACTGG 3 cut(s) 18, 807, 867
BssECI CCNNGG 4 cut(s) 123, 588, 617, 669
BssMI GATC 4 cut(s) 7, 453, 856, 1030
BssNI GRCGYC 1 cut(s) 94
BssT1I CCWWGG 2 cut(s) 617, 669
Bst2UI CCWGG 1 cut(s) 589
Bst4CI ACNGT 2 cut(s) 124, 298
BstACI GRCGYC 1 cut(s) 94
BstAPI GCANNNNNTGC 1 cut(s) 1046
BstBI TTCGAA 1 cut(s) 845
BstC8I GCNNGC 4 cut(s) 201, 780, 820, 1047
BstDEI CTNAG 7 cut(s) 291, 362, 662, 783, 814, 950, 1050
BstDSI CCRYGG 1 cut(s) 123
BstENI CCTNNNNNAGG 1 cut(s) 535
BstF5I GGATG 6 cut(s) 400, 454, 694, 1065, 1091, 1126
BstH2I RGCGCY 3 cut(s) 97, 206, 598
BstHHI GCGC 4 cut(s) 96, 205, 597, 637
BstKTI GATC 4 cut(s) 10, 456, 859, 1033
BstMAI GTCTC 2 cut(s) 287, 326
BstMBI GATC 4 cut(s) 7, 453, 856, 1030
BstMCI CGRYCG 1 cut(s) 123
BstMWI GCNNNNNNNGC 5 cut(s) 221, 653, 819, 1022, 1046
BstNI CCWGG 1 cut(s) 589
BstSCI CCNGG 1 cut(s) 587
BstSFI CTRYAG 1 cut(s) 717
BstV1I GCAGC 3 cut(s) 26, 208, 360
BstXI CCANNNNNNTGG 1 cut(s) 631
BsuRI GGCC 6 cut(s) 22, 622, 656, 1025, 1087, 1125
BtgI CCRYGG 1 cut(s) 123
BtsCI GGATG 6 cut(s) 400, 454, 694, 1065, 1091, 1126
Cac8I GCNNGC 4 cut(s) 201, 780, 820, 1047
CfoI GCGC 4 cut(s) 96, 205, 597, 637
Cfr13I GGNCC 5 cut(s) 21, 621, 655, 700, 742
CviAII CATG 2 cut(s) 324, 648
DdeI CTNAG 7 cut(s) 291, 362, 662, 783, 814, 950, 1050
DinI GGCGCC 1 cut(s) 95
DpnI GATC 4 cut(s) 9, 455, 858, 1032
DpnII GATC 4 cut(s) 7, 453, 856, 1030
EciI GGCGGA 1 cut(s) 803
Eco130I CCWWGG 2 cut(s) 617, 669
Eco147I AGGCCT 1 cut(s) 1087
Eco47I GGWCC 2 cut(s) 700, 742
Eco47III AGCGCT 2 cut(s) 204, 596
Eco88I CYCGRG 2 cut(s) 24, 921
EcoNI CCTNNNNNAGG 1 cut(s) 535
EcoO109I RGGNCCY 1 cut(s) 700
EcoRII CCWGG 1 cut(s) 587
EcoT14I CCWWGG 2 cut(s) 617, 669
EgeI GGCGCC 1 cut(s) 95
EheI GGCGCC 1 cut(s) 95
ErhI CCWWGG 2 cut(s) 617, 669
Esp3I CGTCTC 1 cut(s) 326
FaeI CATG 2 cut(s) 327, 651
FaqI GGGAC 3 cut(s) 554, 713, 755
FatI CATG 2 cut(s) 323, 647
FauNDI CATATG 2 cut(s) 306, 488
FbaI TGATCA 1 cut(s) 856
FblI GTMKAC 1 cut(s) 116
Fnu4HI GCNGC 5 cut(s) 40, 222, 349, 693, 1026
FokI GGATG 6 cut(s) 407, 461, 701, 1072, 1078, 1133
Fsp4HI GCNGC 5 cut(s) 40, 222, 349, 693, 1026
FspBI CTAG 3 cut(s) 537, 618, 824
GlaI GCGC 4 cut(s) 95, 204, 596, 636
GluI GCNGC 5 cut(s) 40, 222, 349, 693, 1026
GsuI CTGGAG 1 cut(s) 571
HaeII RGCGCY 3 cut(s) 97, 206, 598
HaeIII GGCC 6 cut(s) 22, 622, 656, 1025, 1087, 1125
HhaI GCGC 4 cut(s) 96, 205, 597, 637
Hin1I GRCGYC 1 cut(s) 94
Hin1II CATG 2 cut(s) 327, 651
Hin6I GCGC 4 cut(s) 94, 203, 595, 635
HinP1I GCGC 4 cut(s) 94, 203, 595, 635
HinfI GANTC 7 cut(s) 259, 337, 791, 796, 847, 1003, 1011
HphI GGTGA 4 cut(s) 95, 685, 866, 923
Hpy166II GTNNAC 3 cut(s) 82, 117, 127
Hpy188I TCNGA 3 cut(s) 7, 210, 1157
Hpy188III TCNNGA 3 cut(s) 331, 392, 1111
Hpy8I GTNNAC 3 cut(s) 82, 117, 127
HpyAV CCTTC 5 cut(s) 107, 117, 199, 487, 1136
HpyCH4III ACNGT 2 cut(s) 124, 298
HpyCH4IV ACGT 5 cut(s) 84, 413, 564, 684, 1103
HpyCH4V TGCA 5 cut(s) 224, 408, 504, 834, 1065
HpyF10VI GCNNNNNNNGC 5 cut(s) 221, 653, 819, 1022, 1046
HpyF3I CTNAG 7 cut(s) 291, 362, 662, 783, 814, 950, 1050
HpySE526I ACGT 5 cut(s) 84, 413, 564, 684, 1103
Hsp92I GRCGYC 1 cut(s) 94
Hsp92II CATG 2 cut(s) 327, 651
HspAI GCGC 4 cut(s) 94, 203, 595, 635
KasI GGCGCC 1 cut(s) 93
KflI GGGWCCC 1 cut(s) 700
Ksp22I TGATCA 1 cut(s) 856
Kzo9I GATC 4 cut(s) 7, 453, 856, 1030
LmnI GCTCC 2 cut(s) 257, 592
Lsp1109I GCAGC 3 cut(s) 26, 208, 360
LweI GCATC 1 cut(s) 679
MaeI CTAG 3 cut(s) 537, 618, 824
MaeII ACGT 5 cut(s) 84, 413, 564, 684, 1103
MaeIII GTNAC 2 cut(s) 911, 953
MalI GATC 4 cut(s) 9, 455, 858, 1032
MboI GATC 4 cut(s) 7, 453, 856, 1030
MboII GAAGA 2 cut(s) 102, 305
MluCI AATT 2 cut(s) 280, 677
Mly113I GGCGCC 1 cut(s) 94
MlyI GAGTC 3 cut(s) 253, 785, 790
MmeI TCCRAC 1 cut(s) 119
MseI TTAA 4 cut(s) 231, 356, 680, 897
MspR9I CCNGG 1 cut(s) 589
Mva1269I GAATGC 2 cut(s) 217, 815
MvaI CCWGG 1 cut(s) 589
MwoI GCNNNNNNNGC 5 cut(s) 221, 653, 819, 1022, 1046
NarI GGCGCC 1 cut(s) 94
NdeI CATATG 2 cut(s) 306, 488
NdeII GATC 4 cut(s) 7, 453, 856, 1030
NlaIII CATG 2 cut(s) 327, 651
NlaIV GGNNCC 6 cut(s) 23, 95, 657, 701, 702, 743
NmuCI GTSAC 1 cut(s) 911
NspV TTCGAA 1 cut(s) 845
PceI AGGCCT 1 cut(s) 1087
PctI GAATGC 2 cut(s) 217, 815
PfeI GAWTC 4 cut(s) 337, 847, 1003, 1011
PkrI GCNGC 5 cut(s) 41, 223, 350, 694, 1027
PleI GAGTC 3 cut(s) 253, 785, 790
PluTI GGCGCC 1 cut(s) 97
PpsI GAGTC 3 cut(s) 253, 785, 790
PpuMI RGGWCCY 1 cut(s) 700
PsiI TTATAA 1 cut(s) 242
Psp1406I AACGTT 1 cut(s) 84
Psp5II RGGWCCY 1 cut(s) 700
Psp6I CCWGG 1 cut(s) 587
PspGI CCWGG 1 cut(s) 587
PspN4I GGNNCC 6 cut(s) 23, 95, 657, 701, 702, 743
PspPI GGNCC 5 cut(s) 21, 621, 655, 700, 742
PspPPI RGGWCCY 1 cut(s) 700
SaqAI TTAA 4 cut(s) 231, 356, 680, 897
SatI GCNGC 5 cut(s) 40, 222, 349, 693, 1026
Sau3AI GATC 4 cut(s) 7, 453, 856, 1030
Sau96I GGNCC 5 cut(s) 21, 621, 655, 700, 742
SchI GAGTC 3 cut(s) 253, 785, 790
ScrFI CCNGG 1 cut(s) 589
SfaNI GCATC 1 cut(s) 679
SfcI CTRYAG 1 cut(s) 717
SfoI GGCGCC 1 cut(s) 95
SfuI TTCGAA 1 cut(s) 845
SinI GGWCC 2 cut(s) 700, 742
Sse9I AATT 2 cut(s) 280, 677
SseBI AGGCCT 1 cut(s) 1087
SsiI CCGC 3 cut(s) 692, 788, 1026
SspDI GGCGCC 1 cut(s) 93
SspMI CTAG 3 cut(s) 537, 618, 824
StuI AGGCCT 1 cut(s) 1087
StyD4I CCNGG 1 cut(s) 587
StyI CCWWGG 2 cut(s) 617, 669
TaaI ACNGT 2 cut(s) 124, 298
TaiI ACGT 5 cut(s) 87, 416, 567, 687, 1106
TaqI TCGA 5 cut(s) 10, 330, 794, 845, 1055
TasI AATT 2 cut(s) 280, 677
TauI GCSGC 2 cut(s) 695, 1028
TfiI GAWTC 4 cut(s) 337, 847, 1003, 1011
Tru1I TTAA 4 cut(s) 231, 356, 680, 897
Tru9I TTAA 4 cut(s) 231, 356, 680, 897
TseFI GTSAC 1 cut(s) 911
TseI GCWGC 3 cut(s) 39, 221, 348
Tsp45I GTSAC 1 cut(s) 911
TspDTI ATGAA 3 cut(s) 62, 89, 1096
TspGWI ACGGA 1 cut(s) 1119
VpaK11BI GGWCC 2 cut(s) 700, 742
XagI CCTNNNNNAGG 1 cut(s) 535
XmaJI CCTAGG 1 cut(s) 617
XmiI GTMKAC 1 cut(s) 116
XspI CTAG 3 cut(s) 537, 618, 824
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.