Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 317 |
| AcuI | CTGAAG | 1 cut(s) | 164 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 252 |
| AgsI | TTSAA | 2 cut(s) | 175, 197 |
| AluBI | AGCT | 2 cut(s) | 17, 160 |
| AluI | AGCT | 2 cut(s) | 17, 160 |
| AlwI | GGATC | 1 cut(s) | 317 |
| AoxI | GGCC | 2 cut(s) | 138, 151 |
| ApeKI | GCWGC | 1 cut(s) | 164 |
| AspS9I | GGNCC | 1 cut(s) | 151 |
| BbvCI | CCTCAGC | 1 cut(s) | 135 |
| BbvI | GCAGC | 1 cut(s) | 151 |
| BccI | CCATC | 1 cut(s) | 128 |
| BceAI | ACGGC | 1 cut(s) | 125 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 113, 147 |
| BclI | TGATCA | 1 cut(s) | 270 |
| BisI | GCNGC | 1 cut(s) | 165 |
| BlsI | GCNGC | 1 cut(s) | 166 |
| BmgT120I | GGNCC | 1 cut(s) | 151 |
| BmsI | GCATC | 1 cut(s) | 121 |
| BpmI | CTGGAG | 2 cut(s) | 140, 274 |
| Bpu10I | CCTNAGC | 1 cut(s) | 135 |
| BsaJI | CCNNGG | 1 cut(s) | 141 |
| BsaWI | WCCGGW | 1 cut(s) | 306 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 252 |
| Bse1I | ACTGG | 1 cut(s) | 257 |
| BseDI | CCNNGG | 1 cut(s) | 141 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 252 |
| BseMII | CTCAG | 1 cut(s) | 126 |
| BseNI | ACTGG | 1 cut(s) | 257 |
| BseXI | GCAGC | 1 cut(s) | 151 |
| BshFI | GGCC | 2 cut(s) | 140, 153 |
| BsiSI | CCGG | 1 cut(s) | 307 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 252 |
| BsmI | GAATGC | 1 cut(s) | 96 |
| BsnI | GGCC | 2 cut(s) | 140, 153 |
| Bsp143I | GATC | 2 cut(s) | 270, 309 |
| BspANI | GGCC | 2 cut(s) | 140, 153 |
| BspCNI | CTCAG | 1 cut(s) | 127 |
| BspPI | GGATC | 1 cut(s) | 317 |
| BsrI | ACTGG | 1 cut(s) | 257 |
| BssECI | CCNNGG | 1 cut(s) | 141 |
| BssMI | GATC | 2 cut(s) | 270, 309 |
| BstC8I | GCNNGC | 2 cut(s) | 94, 162 |
| BstDEI | CTNAG | 1 cut(s) | 135 |
| BstDSI | CCRYGG | 1 cut(s) | 141 |
| BstKTI | GATC | 2 cut(s) | 273, 312 |
| BstMBI | GATC | 2 cut(s) | 270, 309 |
| BstV1I | GCAGC | 1 cut(s) | 151 |
| BsuRI | GGCC | 2 cut(s) | 140, 153 |
| BtgI | CCRYGG | 1 cut(s) | 141 |
| Cac8I | GCNNGC | 2 cut(s) | 94, 162 |
| Cfr13I | GGNCC | 1 cut(s) | 151 |
| CviAII | CATG | 1 cut(s) | 101 |
| CviJI | RGCY | 4 cut(s) | 17, 140, 153, 160 |
| CviKI_1 | RGCY | 4 cut(s) | 17, 140, 153, 160 |
| DdeI | CTNAG | 1 cut(s) | 135 |
| DpnI | GATC | 2 cut(s) | 272, 311 |
| DpnII | GATC | 2 cut(s) | 270, 309 |
| Eco57I | CTGAAG | 1 cut(s) | 164 |
| EcoO109I | RGGNCCY | 1 cut(s) | 151 |
| FaeI | CATG | 1 cut(s) | 104 |
| FaiI | YATR | 4 cut(s) | 62, 69, 102, 269 |
| FatI | CATG | 1 cut(s) | 100 |
| FbaI | TGATCA | 1 cut(s) | 270 |
| Fnu4HI | GCNGC | 1 cut(s) | 165 |
| Fsp4HI | GCNGC | 1 cut(s) | 165 |
| GluI | GCNGC | 1 cut(s) | 165 |
| GsuI | CTGGAG | 2 cut(s) | 140, 274 |
| HaeIII | GGCC | 2 cut(s) | 140, 153 |
| HapII | CCGG | 1 cut(s) | 307 |
| Hin1II | CATG | 1 cut(s) | 104 |
| HincII | GTYRAC | 1 cut(s) | 35 |
| HindII | GTYRAC | 1 cut(s) | 35 |
| HinfI | GANTC | 2 cut(s) | 106, 175 |
| HpaII | CCGG | 1 cut(s) | 307 |
| Hpy166II | GTNNAC | 1 cut(s) | 35 |
| Hpy188I | TCNGA | 1 cut(s) | 183 |
| Hpy8I | GTNNAC | 1 cut(s) | 35 |
| HpyAV | CCTTC | 1 cut(s) | 191 |
| HpyCH4V | TGCA | 2 cut(s) | 92, 207 |
| HpyF3I | CTNAG | 1 cut(s) | 135 |
| Hsp92II | CATG | 1 cut(s) | 104 |
| Ksp22I | TGATCA | 1 cut(s) | 270 |
| Kzo9I | GATC | 2 cut(s) | 270, 309 |
| LpnPI | CCDG | 3 cut(s) | 72, 170, 238 |
| Lsp1109I | GCAGC | 1 cut(s) | 151 |
| LweI | GCATC | 1 cut(s) | 121 |
| MaeIII | GTNAC | 2 cut(s) | 74, 107 |
| MalI | GATC | 2 cut(s) | 272, 311 |
| MboI | GATC | 2 cut(s) | 270, 309 |
| MboII | GAAGA | 3 cut(s) | 38, 170, 196 |
| MfeI | CAATTG | 1 cut(s) | 170 |
| MluCI | AATT | 5 cut(s) | 51, 170, 189, 232, 313 |
| MlyI | GAGTC | 1 cut(s) | 115 |
| MnlI | CCTC | 3 cut(s) | 130, 164, 306 |
| MseI | TTAA | 3 cut(s) | 147, 218, 316 |
| MspI | CCGG | 1 cut(s) | 307 |
| MunI | CAATTG | 1 cut(s) | 170 |
| Mva1269I | GAATGC | 1 cut(s) | 96 |
| NdeII | GATC | 2 cut(s) | 270, 309 |
| NlaIII | CATG | 1 cut(s) | 104 |
| NmuCI | GTSAC | 2 cut(s) | 74, 107 |
| PctI | GAATGC | 1 cut(s) | 96 |
| PfeI | GAWTC | 1 cut(s) | 175 |
| PkrI | GCNGC | 1 cut(s) | 166 |
| PleI | GAGTC | 1 cut(s) | 114 |
| PpsI | GAGTC | 1 cut(s) | 114 |
| PspPI | GGNCC | 1 cut(s) | 151 |
| SaqAI | TTAA | 3 cut(s) | 147, 218, 316 |
| SatI | GCNGC | 1 cut(s) | 165 |
| Sau3AI | GATC | 2 cut(s) | 270, 309 |
| Sau96I | GGNCC | 1 cut(s) | 151 |
| SchI | GAGTC | 1 cut(s) | 115 |
| SetI | ASST | 3 cut(s) | 19, 162, 298 |
| SfaNI | GCATC | 1 cut(s) | 121 |
| SgeI | CNNG | 8 cut(s) | 30, 99, 105, 113, 154, 169, 173, 265 |
| Sse9I | AATT | 5 cut(s) | 51, 170, 189, 232, 313 |
| TaqI | TCGA | 1 cut(s) | 123 |
| TasI | AATT | 5 cut(s) | 51, 170, 189, 232, 313 |
| TfiI | GAWTC | 1 cut(s) | 175 |
| Tru1I | TTAA | 3 cut(s) | 147, 218, 316 |
| Tru9I | TTAA | 3 cut(s) | 147, 218, 316 |
| TseFI | GTSAC | 2 cut(s) | 74, 107 |
| TseI | GCWGC | 1 cut(s) | 164 |
| Tsp45I | GTSAC | 2 cut(s) | 74, 107 |
| TspDTI | ATGAA | 3 cut(s) | 39, 89, 225 |