Rorug07G0240500

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000093
Physical Location & Seq
Forward (+)
22130339 .. 22131641
1303 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0240500.1

Sequence Viewer

Length: 642 bp
ATGGAGAAAGCAGCAGCAGCAGAGGGATCCATGGCGGCCGAGCGCGACCCGGAGAGGTCGCAGCACCACCTCACAGTCCCCTCCGGGTTGACTCAGTCCGAGTTCGAGGAGTTGAAGCCCTGCGTGGCCGAGTTCCACACGTACCGGGTAGGCCCGGGGTATTGCTCCTCCCTACTGGCGCAGCGAGTCCACGCGCCGCTGGAGACGGTGTGGAGTGTGGTGCGGCGGTTCGACCGGCCGCAGACGTACAAGCACTTCATCCGGAGCTGCACGGTCAGAGAAGGGATTGTAATGAGCGTGGGATGCACGAGGGAGGTGAATGTAATTTCGGGGCTACCGGCGGCGACGAGCACGGAGAGGCTGGACTTGCTGGACGATGACCGACACGTCACCGGGTTCAGTATTACAGGGGGAGAGCACCGGCTGAGGAATTACCGGTCGGTGACCACCGTGCATGGGTTCGAGCGCGACGGGAGGATCTGCACGGTCGTTTTGGAATCGTATGTGGTGGATGTGCCGGAGGGGAATAGCGAGGAGGAAACGCGGCTGTTCGCCGATACGGTGGTCAGGTTGAATCTGCAGAAGCTGGCGTCGGTCACGGAAGCCATGGCCCGTGACGGTGACGCTAATTTCCAGGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04144 map04144
Pfam Domains
Protein Families
RVT_3 zf-RVT

Protein Analysis

213

Amino Acids

23.74

Weight (kDa)

5.63

Isoelectric Point (pI)

41.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Polyketide_cyc2 PF10604 62 - 200 5.8e-13 Polyketide cyclase / dehydrase and lipid transport
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000093)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G09490
fragaria_vesca FvH4_1g23791 FvH4_2g01641 FvH4_2g04612 FvH4_2g06831 FvH4_2g07841 FvH4_2g13581 FvH4_2g27220 FvH4_2g30621 FvH4_2g34753 FvH4_3g10392 FvH4_3g24291 FvH4_3g25030 FvH4_3g29361 FvH4_3g31372 FvH4_3g32402 FvH4_3g43651 FvH4_4g03830 FvH4_4g05481 FvH4_4g20431 FvH4_4g21421 FvH4_4g25931 FvH4_5g08801 FvH4_5g21021 FvH4_5g26254 FvH4_5g30931 FvH4_5g31281 FvH4_5g33581 FvH4_5g35622 FvH4_6g02100 FvH4_6g07963 FvH4_6g11620 FvH4_6g16031 FvH4_6g19041 FvH4_6g24211 FvH4_6g24271 FvH4_6g30670 FvH4_6g49540 FvH4_7g25914
malus_domestica MD03G1245200.v1.1 MD04G1168000.v1.1 MD09G1242600.v1.1 MD15G1334000.v1.1 MD17G1165700.v1.1
prunus_persica Prupe.1G073500_v2.0.a1 Prupe.1G283700_v2.0.a1 Prupe.1G524100_v2.0.a1 Prupe.2G022700_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G044300_v2.0.a1 Prupe.2G048800_v2.0.a1 Prupe.2G092000_v2.0.a1 Prupe.2G216500_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.3G103400_v2.0.a1 Prupe.3G143300_v2.0.a1 Prupe.3G190000_v2.0.a1 Prupe.3G219800_v2.0.a1 Prupe.4G177800_v2.0.a1 Prupe.4G261300_v2.0.a1 Prupe.5G044600_v2.0.a1 Prupe.5G067400_v2.0.a1 Prupe.7G083900_v2.0.a1 Prupe.7G120900_v2.0.a1 Prupe.8G032200_v2.0.a1 Prupe.8G036100_v2.0.a1 Prupe.8G042700_v2.0.a1
pyrus_communis pycom01g21710 pycom02g19770 pycom03g05120 pycom05g01370 pycom05g08780 pycom05g10120 pycom07g01370 pycom07g05930 pycom08g15760 pycom08g18090 pycom08g21060 pycom09g03880 pycom10g03870 pycom13g22240 pycom16g05120 pycom16g17170 pycom17g12180 pycom17g16290 pycom17g21230 pycom17g24990 pycom215g00100
rosa_chinensis RchiOBHm_Chr1g0323031 RchiOBHm_Chr1g0324391 RchiOBHm_Chr1g0326401 RchiOBHm_Chr1g0327811 RchiOBHm_Chr1g0332521 RchiOBHm_Chr1g0336501 RchiOBHm_Chr1g0346021 RchiOBHm_Chr1g0347191 RchiOBHm_Chr1g0367181 RchiOBHm_Chr2g0089441 RchiOBHm_Chr2g0115441 RchiOBHm_Chr3g0490691 RchiOBHm_Chr4g0395251 RchiOBHm_Chr4g0398081 RchiOBHm_Chr4g0409451 RchiOBHm_Chr4g0413041 RchiOBHm_Chr4g0415471 RchiOBHm_Chr4g0420961 RchiOBHm_Chr5g0040301 RchiOBHm_Chr5g0070651 RchiOBHm_Chr6g0263011 RchiOBHm_Chr6g0270721 RchiOBHm_Chr6g0277111 RchiOBHm_Chr7g0179771 RchiOBHm_Chr7g0223051 RchiOBHm_Chr7g0225031 RchiOBHm_Chr7g0225091
rosa_laevigata RLG00000001668 RLG00000001672 RLG00000001676 RLG00000007762 RLG00000008994 RLG00000011117 RLG00000013729 RLG00000013839 RLG00000014759 RLG00000016638 RLG00000018535 RLG00000018614 RLG00000018646 RLG00000020679 RLG00000023337 RLG00000029348 RLG00000035891 RLG00000035912
rosa_multiflora Rmu_co8152500.1_g000001 Rmu_co8203314.1_g000001 Rmu_co8383183.1_g000001 Rmu_sc0000293.1_g000033 Rmu_sc0000367.1_g000226 Rmu_sc0000512.1_g000023 Rmu_sc0000594.1_g000059 Rmu_sc0000654.1_g000022 Rmu_sc0000654.1_g000047 Rmu_sc0000706.1_g000037 Rmu_sc0001348.1_g000008 Rmu_sc0001385.1_g000024 Rmu_sc0001405.1_g000002 Rmu_sc0001521.1_g000048 Rmu_sc0001932.1_g000008 Rmu_sc0001932.1_g000009 Rmu_sc0002535.1_g000011 Rmu_sc0002908.1_g000019 Rmu_sc0003709.1_g000004 Rmu_sc0003882.1_g000054 Rmu_sc0004035.1_g000007 Rmu_sc0004041.1_g000007 Rmu_sc0004288.1_g000011 Rmu_sc0004569.1_g000004 Rmu_sc0004677.1_g000016 Rmu_sc0004834.1_g000010 Rmu_sc0005193.1_g000008 Rmu_sc0005354.1_g000009 Rmu_sc0006514.1_g000021 Rmu_sc0006691.1_g000001 Rmu_sc0006888.1_g000021 Rmu_sc0006889.1_g000013 Rmu_sc0008096.1_g000017 Rmu_sc0008378.1_g000003 Rmu_sc0009127.1_g000005 Rmu_sc0009191.1_g000016 Rmu_sc0009687.1_g000018 Rmu_sc0009709.1_g000005 Rmu_sc0009880.1_g000015 Rmu_sc0011710.1_g000001 Rmu_sc0012615.1_g000004 Rmu_sc0016091.1_g000002 Rmu_sc0022339.1_g000006 Rmu_sc0026537.1_g000002 Rmu_sc0027689.1_g000002 Rmu_sc0036222.1_g000001 Rmu_sc0040890.1_g000001 Rmu_ssc0000148.1_g000006 Rmu_ssc0000151.1_g000017 Rmu_ssc0000404.1_g000018 Rmu_ssc0000449.1_g000009
rosa_roxburghii Rroxscaffold_1G00017760 Rroxscaffold_1G00059150 Rroxscaffold_2G00142560 Rroxscaffold_3G00220440 Rroxscaffold_3G00231700 Rroxscaffold_3G00232400 Rroxscaffold_3G00274510 Rroxscaffold_4G00288790 Rroxscaffold_4G00305680 Rroxscaffold_4G00314880 Rroxscaffold_4G00314900 Rroxscaffold_5G00334590 Rroxscaffold_6G00394110 Rroxscaffold_6G00415860 Rroxscaffold_7G00168240 Rroxscaffold_7G00204400 Rroxscaffold_7G00207840
rosa_rugosa Rorug01G0034900 Rorug02G0079500 Rorug02G0229000 Rorug02G0229100 Rorug02G0291400 Rorug02G0298800 Rorug03G0046400 Rorug03G0064700 Rorug03G0077300 Rorug03G0199000 Rorug03G0200400 Rorug04G0205200 Rorug05G0025400 Rorug05G0127400 Rorug05G0192100 Rorug05G0453400 Rorug05G0538300 Rorug06G0035200 Rorug06G0241000 Rorug06G0268300 Rorug07G0120300 Rorug07G0145000 Rorug07G0209100 Rorug07G0240500 Rorug07G0271700
rosa_samantha Rh1AG179100 Rh1BG106900 Rh1BG163400 Rh1BG163500 Rh1BG323500 Rh2CG447900 Rh2DG503700 Rh3AG293600 Rh3CG229100 Rh3DG221500 Rh4AG106000 Rh4BG267700 Rh4CG062500 Rh4CG090100 Rh4CG114800 Rh5AG038400 Rh5BG395400 Rh5CG441700 Rh5CG572000 Rh6AG222400 Rh6AG264500 Rh6BG137400 Rh6BG225700 Rh6CG144300 Rh6DG087600 Rh6DG096000 Rh6DG362400 Rh6DG390200 Rh7AG207500 Rh7AG324700 Rh7AG388800 Rh7AG437100 Rh7BG019000 Rh7BG374600 Rh7CG028700 Rh7CG341500 Rh7CG408000 Rh7CG408300 Rh7DG354600
rosa_wichuraiana Rw0G009630 Rw0G012170 Rw4G022700 Rw5G028420 Rw5G029490 Rw6G007220 Rw6G007410 Rw6G017880 Rw7G012440 Rw7G021830 Rw7G027490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 386
AccII CGCG 4 cut(s) 45, 194, 468, 544
AccIII TCCGGA 1 cut(s) 261
AciI CCGC 7 cut(s) 35, 197, 223, 226, 239, 341, 544
AclWI GGATC 3 cut(s) 21, 34, 485
AcoI YGGCCR 3 cut(s) 36, 126, 236
AcyI GRCGYC 1 cut(s) 590
AfaI GTAC 2 cut(s) 143, 248
AfiI CCNNNNNNNGG 1 cut(s) 456
AflIII ACRYGT 2 cut(s) 138, 385
AgeI ACCGGT 1 cut(s) 435
AgsI TTSAA 2 cut(s) 115, 574
AjiI CACGTC 1 cut(s) 388
AjnI CCWGG 1 cut(s) 633
AluBI AGCT 2 cut(s) 267, 586
AluI AGCT 2 cut(s) 267, 586
Alw21I GWGCWC 2 cut(s) 353, 420
Alw26I GTCTC 1 cut(s) 197
AlwI GGATC 3 cut(s) 21, 34, 485
AlwNI CAGNNNCTG 1 cut(s) 586
Ama87I CYCGRG 1 cut(s) 154
Aor13HI TCCGGA 1 cut(s) 261
AoxI GGCC 5 cut(s) 36, 126, 151, 236, 609
ApeKI GCWGC 6 cut(s) 11, 14, 17, 61, 181, 267
AsiGI ACCGGT 1 cut(s) 435
AspLEI GCGC 4 cut(s) 45, 181, 196, 468
AspS9I GGNCC 2 cut(s) 152, 610
AsuC2I CCSGG 6 cut(s) 50, 85, 146, 155, 156, 394
AsuHPI GGTGA 4 cut(s) 328, 382, 454, 632
AvaI CYCGRG 1 cut(s) 154
BaeI ACNNNNGTAYC 2 cut(s) 549, 582
BamHI GGATCC 1 cut(s) 26
BarI GAAGNNNNNNTAC 2 cut(s) 239, 271
BauI CACGAG 1 cut(s) 307
Bbv12I GWGCWC 2 cut(s) 353, 420
BbvCI CCTCAGC 1 cut(s) 425
BbvI GCAGC 6 cut(s) 23, 26, 29, 73, 193, 254
BciT130I CCWGG 1 cut(s) 635
BcnI CCSGG 6 cut(s) 50, 85, 146, 155, 156, 394
BcoDI GTCTC 1 cut(s) 197
BfmI CTRYAG 1 cut(s) 578
Bme1390I CCNGG 7 cut(s) 50, 85, 146, 155, 156, 394, 635
BmeT110I CYCGRG 1 cut(s) 154
BmgBI CACGTC 1 cut(s) 388
BmgT120I GGNCC 2 cut(s) 152, 610
BmiI GGNNCC 1 cut(s) 28
BmrFI CCNGG 7 cut(s) 50, 85, 146, 155, 156, 394, 635
BmsI GCATC 1 cut(s) 293
BpmI CTGGAG 1 cut(s) 221
Bpu10I CCTNAGC 1 cut(s) 425
BpuMI CCSGG 6 cut(s) 50, 85, 146, 155, 156, 394
BsaAI YACGTR 1 cut(s) 141
BsaHI GRCGYC 1 cut(s) 590
BsaJI CCNNGG 4 cut(s) 30, 154, 155, 606
BsaWI WCCGGW 2 cut(s) 261, 435
BsaXI ACNNNNNCTCC 2 cut(s) 194, 224
Bsc4I CCNNNNNNNGG 1 cut(s) 456
Bse118I RCCGGY 4 cut(s) 234, 337, 420, 435
Bse1I ACTGG 1 cut(s) 180
BseAI TCCGGA 1 cut(s) 261
BseBI CCWGG 1 cut(s) 635
BseDI CCNNGG 4 cut(s) 30, 154, 155, 606
BseGI GGATG 3 cut(s) 258, 308, 517
BseLI CCNNNNNNNGG 1 cut(s) 456
BseMII CTCAG 2 cut(s) 107, 416
BseNI ACTGG 1 cut(s) 180
BseRI GAGGAG 3 cut(s) 122, 157, 548
BseX3I CGGCCG 2 cut(s) 36, 236
BseXI GCAGC 6 cut(s) 23, 26, 29, 73, 193, 254
BsgI GTGCAG 2 cut(s) 253, 466
Bsh1236I CGCG 4 cut(s) 45, 194, 468, 544
Bsh1285I CGRYCG 5 cut(s) 39, 235, 239, 440, 489
BshFI GGCC 5 cut(s) 38, 128, 153, 238, 611
BshTI ACCGGT 1 cut(s) 435
BsiEI CGRYCG 5 cut(s) 39, 235, 239, 440, 489
BsiHKAI GWGCWC 2 cut(s) 353, 420
BsiHKCI CYCGRG 1 cut(s) 154
BslFI GGGAC 1 cut(s) 62
BslI CCNNNNNNNGG 1 cut(s) 456
BsmAI GTCTC 1 cut(s) 197
BsmBI CGTCTC 1 cut(s) 197
BsmFI GGGAC 1 cut(s) 62
BsnI GGCC 5 cut(s) 38, 128, 153, 238, 611
BsoBI CYCGRG 1 cut(s) 154
Bsp1286I GDGCHC 2 cut(s) 353, 420
Bsp13I TCCGGA 1 cut(s) 261
Bsp143I GATC 2 cut(s) 26, 477
Bsp19I CCATGG 2 cut(s) 30, 606
BspACI CCGC 7 cut(s) 35, 197, 223, 226, 239, 341, 544
BspANI GGCC 5 cut(s) 38, 128, 153, 238, 611
BspCNI CTCAG 2 cut(s) 106, 417
BspEI TCCGGA 1 cut(s) 261
BspFNI CGCG 4 cut(s) 45, 194, 468, 544
BspLI GGNNCC 1 cut(s) 28
BspMAI CTGCAG 1 cut(s) 582
BspPI GGATC 3 cut(s) 21, 34, 485
BsrFI RCCGGY 4 cut(s) 234, 337, 420, 435
BsrI ACTGG 1 cut(s) 180
BssAI RCCGGY 4 cut(s) 234, 337, 420, 435
BssECI CCNNGG 4 cut(s) 30, 154, 155, 606
BssMI GATC 2 cut(s) 26, 477
BssNI GRCGYC 1 cut(s) 590
BssSI CACGAG 1 cut(s) 307
BssT1I CCWWGG 2 cut(s) 30, 606
Bst2BI CACGAG 1 cut(s) 307
Bst2UI CCWGG 1 cut(s) 635
Bst4CI ACNGT 7 cut(s) 76, 208, 274, 451, 487, 562, 620
BstACI GRCGYC 1 cut(s) 590
BstBAI YACGTR 1 cut(s) 141
BstC8I GCNNGC 1 cut(s) 588
BstDEI CTNAG 2 cut(s) 93, 425
BstDSI CCRYGG 2 cut(s) 30, 606
BstEII GGTNACC 1 cut(s) 442
BstF5I GGATG 3 cut(s) 258, 308, 517
BstFNI CGCG 4 cut(s) 45, 194, 468, 544
BstHHI GCGC 4 cut(s) 45, 181, 196, 468
BstKTI GATC 2 cut(s) 29, 480
BstMAI GTCTC 1 cut(s) 197
BstMBI GATC 2 cut(s) 26, 477
BstMCI CGRYCG 5 cut(s) 39, 235, 239, 440, 489
BstMWI GCNNNNNNNGC 3 cut(s) 17, 303, 367
BstNI CCWGG 1 cut(s) 635
BstPI GGTNACC 1 cut(s) 442
BstSCI CCNGG 7 cut(s) 48, 83, 144, 153, 154, 392, 633
BstSFI CTRYAG 1 cut(s) 578
BstUI CGCG 4 cut(s) 45, 194, 468, 544
BstV1I GCAGC 6 cut(s) 23, 26, 29, 73, 193, 254
BstX2I RGATCY 2 cut(s) 26, 477
BstYI RGATCY 2 cut(s) 26, 477
BstZI CGGCCG 2 cut(s) 36, 236
BsuRI GGCC 5 cut(s) 38, 128, 153, 238, 611
BtgI CCRYGG 2 cut(s) 30, 606
BtrI CACGTC 1 cut(s) 388
BtsCI GGATG 3 cut(s) 258, 308, 517
Cac8I GCNNGC 1 cut(s) 588
CaiI CAGNNNCTG 1 cut(s) 586
CfoI GCGC 4 cut(s) 45, 181, 196, 468
Cfr10I RCCGGY 4 cut(s) 234, 337, 420, 435
Cfr13I GGNCC 2 cut(s) 152, 610
Cfr9I CCCGGG 1 cut(s) 154
CseI GACGC 2 cut(s) 579, 632
Csp6I GTAC 2 cut(s) 142, 247
CspAI ACCGGT 1 cut(s) 435
CviAII CATG 3 cut(s) 31, 455, 607
CviQI GTAC 2 cut(s) 142, 247
DdeI CTNAG 2 cut(s) 93, 425
DpnI GATC 2 cut(s) 28, 479
DpnII GATC 2 cut(s) 26, 477
DrdI GACNNNNNNGTC 1 cut(s) 386
DseDI GACNNNNNNGTC 1 cut(s) 386
EaeI YGGCCR 3 cut(s) 36, 126, 236
EagI CGGCCG 2 cut(s) 36, 236
EclXI CGGCCG 2 cut(s) 36, 236
Eco130I CCWWGG 2 cut(s) 30, 606
Eco52I CGGCCG 2 cut(s) 36, 236
Eco88I CYCGRG 1 cut(s) 154
Eco91I GGTNACC 1 cut(s) 442
EcoO65I GGTNACC 1 cut(s) 442
EcoRII CCWGG 1 cut(s) 633
EcoT14I CCWWGG 2 cut(s) 30, 606
ErhI CCWWGG 2 cut(s) 30, 606
Esp3I CGTCTC 1 cut(s) 197
FaeI CATG 3 cut(s) 34, 458, 610
FaiI YATR 4 cut(s) 32, 456, 504, 608
FaqI GGGAC 1 cut(s) 62
FatI CATG 3 cut(s) 30, 454, 606
FokI GGATG 3 cut(s) 245, 315, 524
GlaI GCGC 4 cut(s) 44, 180, 195, 467
GsuI CTGGAG 1 cut(s) 221
HaeIII GGCC 5 cut(s) 38, 128, 153, 238, 611
HgaI GACGC 2 cut(s) 579, 632
HhaI GCGC 4 cut(s) 45, 181, 196, 468
Hin1I GRCGYC 1 cut(s) 590
Hin1II CATG 3 cut(s) 34, 458, 610
Hin6I GCGC 4 cut(s) 43, 179, 194, 466
HinP1I GCGC 4 cut(s) 43, 179, 194, 466
HincII GTYRAC 1 cut(s) 90
HindII GTYRAC 1 cut(s) 90
HinfI GANTC 4 cut(s) 91, 186, 497, 574
HphI GGTGA 4 cut(s) 328, 382, 454, 632
Hpy166II GTNNAC 2 cut(s) 90, 190
Hpy188I TCNGA 3 cut(s) 100, 278, 641
Hpy188III TCNNGA 1 cut(s) 262
Hpy8I GTNNAC 2 cut(s) 90, 190
Hpy99I CGWCG 3 cut(s) 349, 473, 595
HpyAV CCTTC 1 cut(s) 275
HpyCH4III ACNGT 7 cut(s) 76, 208, 274, 451, 487, 562, 620
HpyCH4IV ACGT 3 cut(s) 140, 245, 387
HpyCH4V TGCA 5 cut(s) 270, 306, 454, 483, 580
HpyF10VI GCNNNNNNNGC 3 cut(s) 17, 303, 367
HpyF3I CTNAG 2 cut(s) 93, 425
HpySE526I ACGT 3 cut(s) 140, 245, 387
Hsp92I GRCGYC 1 cut(s) 590
Hsp92II CATG 3 cut(s) 34, 458, 610
HspAI GCGC 4 cut(s) 43, 179, 194, 466
Kpn2I TCCGGA 1 cut(s) 261
Kzo9I GATC 2 cut(s) 26, 477
LmnI GCTCC 2 cut(s) 170, 264
Lsp1109I GCAGC 6 cut(s) 23, 26, 29, 73, 193, 254
LweI GCATC 1 cut(s) 293
MaeII ACGT 3 cut(s) 140, 245, 387
MaeIII GTNAC 5 cut(s) 388, 442, 595, 614, 620
MalI GATC 2 cut(s) 28, 479
MboI GATC 2 cut(s) 26, 477
MflI RGATCY 2 cut(s) 26, 477
MhlI GDGCHC 2 cut(s) 353, 420
MluCI AATT 3 cut(s) 324, 430, 628
MlyI GAGTC 2 cut(s) 85, 195
MroI TCCGGA 1 cut(s) 261
MspA1I CMGCKG 1 cut(s) 199
MspR9I CCNGG 7 cut(s) 50, 85, 146, 155, 156, 394, 635
MvaI CCWGG 1 cut(s) 635
MvnI CGCG 4 cut(s) 45, 194, 468, 544
MwoI GCNNNNNNNGC 3 cut(s) 17, 303, 367
NciI CCSGG 6 cut(s) 50, 85, 146, 155, 156, 394
NcoI CCATGG 2 cut(s) 30, 606
NdeII GATC 2 cut(s) 26, 477
NlaIII CATG 3 cut(s) 34, 458, 610
NlaIV GGNNCC 1 cut(s) 28
NmeAIII GCCGAG 2 cut(s) 64, 154
NmuCI GTSAC 5 cut(s) 388, 442, 595, 614, 620
PfeI GAWTC 2 cut(s) 497, 574
PflFI GACNNNGTC 1 cut(s) 94
PinAI ACCGGT 1 cut(s) 435
PleI GAGTC 2 cut(s) 85, 194
PpsI GAGTC 2 cut(s) 85, 194
Ppu21I YACGTR 1 cut(s) 141
Psp6I CCWGG 1 cut(s) 633
PspEI GGTNACC 1 cut(s) 442
PspGI CCWGG 1 cut(s) 633
PspN4I GGNNCC 1 cut(s) 28
PspPI GGNCC 2 cut(s) 152, 610
PstI CTGCAG 1 cut(s) 582
PstNI CAGNNNCTG 1 cut(s) 586
PsuI RGATCY 2 cut(s) 26, 477
PsyI GACNNNGTC 1 cut(s) 94
RsaI GTAC 2 cut(s) 143, 248
RsaNI GTAC 2 cut(s) 142, 247
Sau3AI GATC 2 cut(s) 26, 477
Sau96I GGNCC 2 cut(s) 152, 610
SchI GAGTC 2 cut(s) 85, 195
ScrFI CCNGG 7 cut(s) 50, 85, 146, 155, 156, 394, 635
SduI GDGCHC 2 cut(s) 353, 420
SfaNI GCATC 1 cut(s) 293
SfcI CTRYAG 1 cut(s) 578
SmaI CCCGGG 1 cut(s) 156
Sse9I AATT 3 cut(s) 324, 430, 628
SsiI CCGC 7 cut(s) 35, 197, 223, 226, 239, 341, 544
StyD4I CCNGG 7 cut(s) 48, 83, 144, 153, 154, 392, 633
StyI CCWWGG 2 cut(s) 30, 606
TaaI ACNGT 7 cut(s) 76, 208, 274, 451, 487, 562, 620
TaiI ACGT 3 cut(s) 143, 248, 390
TaqI TCGA 3 cut(s) 105, 231, 462
TaqII GACCGA 2 cut(s) 396, 583
TasI AATT 3 cut(s) 324, 430, 628
TauI GCSGC 6 cut(s) 38, 199, 226, 241, 344, 547
TfiI GAWTC 2 cut(s) 497, 574
TseFI GTSAC 5 cut(s) 388, 442, 595, 614, 620
TseI GCWGC 6 cut(s) 11, 14, 17, 61, 181, 267
Tsp45I GTSAC 5 cut(s) 388, 442, 595, 614, 620
TspDTI ATGAA 1 cut(s) 247
TspGWI ACGGA 2 cut(s) 368, 614
TspMI CCCGGG 1 cut(s) 154
Tth111I GACNNNGTC 1 cut(s) 94
XmaI CCCGGG 1 cut(s) 154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.