Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 204 |
| AciI | CCGC | 1 cut(s) | 179 |
| AclWI | GGATC | 1 cut(s) | 248 |
| AcoI | YGGCCR | 1 cut(s) | 180 |
| AcsI | RAATTY | 1 cut(s) | 79 |
| AcuI | CTGAAG | 1 cut(s) | 171 |
| AluBI | AGCT | 2 cut(s) | 158, 175 |
| AluI | AGCT | 2 cut(s) | 158, 175 |
| AlwI | GGATC | 1 cut(s) | 248 |
| AoxI | GGCC | 2 cut(s) | 180, 278 |
| ApeKI | GCWGC | 2 cut(s) | 110, 155 |
| ApoI | RAATTY | 1 cut(s) | 79 |
| AsuII | TTCGAA | 1 cut(s) | 76 |
| BauI | CACGAG | 1 cut(s) | 117 |
| BbvI | GCAGC | 2 cut(s) | 97, 167 |
| BccI | CCATC | 1 cut(s) | 20 |
| BfaI | CTAG | 2 cut(s) | 98, 298 |
| BfmI | CTRYAG | 1 cut(s) | 193 |
| BisI | GCNGC | 3 cut(s) | 111, 156, 180 |
| BlsI | GCNGC | 3 cut(s) | 112, 157, 181 |
| BmiI | GGNNCC | 1 cut(s) | 260 |
| BmsI | GCATC | 1 cut(s) | 122 |
| Bpu14I | TTCGAA | 1 cut(s) | 76 |
| BpuEI | CTTGAG | 1 cut(s) | 158 |
| BsaAI | YACGTR | 1 cut(s) | 208 |
| Bse3DI | GCAATG | 1 cut(s) | 49 |
| BseMI | GCAATG | 1 cut(s) | 49 |
| BseXI | GCAGC | 2 cut(s) | 97, 167 |
| BshFI | GGCC | 2 cut(s) | 182, 280 |
| BsnI | GGCC | 2 cut(s) | 182, 280 |
| Bsp119I | TTCGAA | 1 cut(s) | 76 |
| Bsp143I | GATC | 1 cut(s) | 240 |
| BspACI | CCGC | 1 cut(s) | 179 |
| BspANI | GGCC | 2 cut(s) | 182, 280 |
| BspLI | GGNNCC | 1 cut(s) | 260 |
| BspPI | GGATC | 1 cut(s) | 248 |
| BspT104I | TTCGAA | 1 cut(s) | 76 |
| BsrDI | GCAATG | 1 cut(s) | 49 |
| BssMI | GATC | 1 cut(s) | 240 |
| BssSI | CACGAG | 1 cut(s) | 117 |
| Bst2BI | CACGAG | 1 cut(s) | 117 |
| Bst4CI | ACNGT | 1 cut(s) | 263 |
| BstBAI | YACGTR | 1 cut(s) | 208 |
| BstBI | TTCGAA | 1 cut(s) | 76 |
| BstC8I | GCNNGC | 1 cut(s) | 177 |
| BstKTI | GATC | 1 cut(s) | 243 |
| BstMBI | GATC | 1 cut(s) | 240 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 155 |
| BstSFI | CTRYAG | 1 cut(s) | 193 |
| BstV1I | GCAGC | 2 cut(s) | 97, 167 |
| BsuRI | GGCC | 2 cut(s) | 182, 280 |
| Cac8I | GCNNGC | 1 cut(s) | 177 |
| CviAII | CATG | 1 cut(s) | 163 |
| CviJI | RGCY | 8 cut(s) | 105, 110, 149, 158, 175, 182, 192, 280 |
| CviKI_1 | RGCY | 8 cut(s) | 105, 110, 149, 158, 175, 182, 192, 280 |
| DpnI | GATC | 1 cut(s) | 242 |
| DpnII | GATC | 1 cut(s) | 240 |
| EaeI | YGGCCR | 1 cut(s) | 180 |
| Eco147I | AGGCCT | 1 cut(s) | 280 |
| Eco57I | CTGAAG | 1 cut(s) | 171 |
| FaeI | CATG | 1 cut(s) | 166 |
| FaiI | YATR | 3 cut(s) | 164, 195, 254 |
| FatI | CATG | 1 cut(s) | 162 |
| FblI | GTMKAC | 1 cut(s) | 204 |
| Fnu4HI | GCNGC | 3 cut(s) | 111, 156, 180 |
| Fsp4HI | GCNGC | 3 cut(s) | 111, 156, 180 |
| FspBI | CTAG | 2 cut(s) | 98, 298 |
| GluI | GCNGC | 3 cut(s) | 111, 156, 180 |
| HaeIII | GGCC | 2 cut(s) | 182, 280 |
| Hin1II | CATG | 1 cut(s) | 166 |
| HinfI | GANTC | 3 cut(s) | 66, 212, 218 |
| Hpy166II | GTNNAC | 2 cut(s) | 205, 235 |
| Hpy188I | TCNGA | 1 cut(s) | 217 |
| Hpy188III | TCNNGA | 2 cut(s) | 117, 137 |
| Hpy8I | GTNNAC | 2 cut(s) | 205, 235 |
| HpyAV | CCTTC | 1 cut(s) | 291 |
| HpyCH4III | ACNGT | 1 cut(s) | 263 |
| HpyCH4IV | ACGT | 1 cut(s) | 207 |
| HpyCH4V | TGCA | 1 cut(s) | 113 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 155 |
| HpySE526I | ACGT | 1 cut(s) | 207 |
| Hsp92II | CATG | 1 cut(s) | 166 |
| Kzo9I | GATC | 1 cut(s) | 240 |
| LmnI | GCTCC | 1 cut(s) | 172 |
| LpnPI | CCDG | 1 cut(s) | 262 |
| Lsp1109I | GCAGC | 2 cut(s) | 97, 167 |
| LweI | GCATC | 1 cut(s) | 122 |
| MaeI | CTAG | 2 cut(s) | 98, 298 |
| MaeII | ACGT | 1 cut(s) | 207 |
| MaeIII | GTNAC | 1 cut(s) | 125 |
| MalI | GATC | 1 cut(s) | 242 |
| MboI | GATC | 1 cut(s) | 240 |
| MluCI | AATT | 1 cut(s) | 79 |
| MlyI | GAGTC | 2 cut(s) | 75, 212 |
| MmeI | TCCRAC | 2 cut(s) | 43, 150 |
| MnlI | CCTC | 5 cut(s) | 95, 133, 139, 241, 283 |
| MseI | TTAA | 2 cut(s) | 12, 18 |
| MspA1I | CMGCKG | 1 cut(s) | 158 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 155 |
| NdeII | GATC | 1 cut(s) | 240 |
| NlaIII | CATG | 1 cut(s) | 166 |
| NlaIV | GGNNCC | 1 cut(s) | 260 |
| NmuCI | GTSAC | 1 cut(s) | 125 |
| NspV | TTCGAA | 1 cut(s) | 76 |
| PceI | AGGCCT | 1 cut(s) | 280 |
| PfeI | GAWTC | 1 cut(s) | 212 |
| PkrI | GCNGC | 3 cut(s) | 112, 157, 181 |
| PleI | GAGTC | 2 cut(s) | 74, 212 |
| PpsI | GAGTC | 2 cut(s) | 74, 212 |
| Ppu21I | YACGTR | 1 cut(s) | 208 |
| PspN4I | GGNNCC | 1 cut(s) | 260 |
| PvuII | CAGCTG | 1 cut(s) | 158 |
| SaqAI | TTAA | 2 cut(s) | 12, 18 |
| SatI | GCNGC | 3 cut(s) | 111, 156, 180 |
| Sau3AI | GATC | 1 cut(s) | 240 |
| SchI | GAGTC | 2 cut(s) | 75, 212 |
| SetI | ASST | 5 cut(s) | 144, 160, 177, 210, 294 |
| SfaNI | GCATC | 1 cut(s) | 122 |
| SfcI | CTRYAG | 1 cut(s) | 193 |
| SfuI | TTCGAA | 1 cut(s) | 76 |
| SmlI | CTYRAG | 1 cut(s) | 137 |
| SmoI | CTYRAG | 1 cut(s) | 137 |
| Sse9I | AATT | 1 cut(s) | 79 |
| SseBI | AGGCCT | 1 cut(s) | 280 |
| SsiI | CCGC | 1 cut(s) | 179 |
| SspI | AATATT | 1 cut(s) | 22 |
| SspMI | CTAG | 2 cut(s) | 98, 298 |
| StuI | AGGCCT | 1 cut(s) | 280 |
| TaaI | ACNGT | 1 cut(s) | 263 |
| TaiI | ACGT | 1 cut(s) | 210 |
| TaqI | TCGA | 1 cut(s) | 76 |
| TasI | AATT | 1 cut(s) | 79 |
| TauI | GCSGC | 1 cut(s) | 182 |
| TfiI | GAWTC | 1 cut(s) | 212 |
| Tru1I | TTAA | 2 cut(s) | 12, 18 |
| Tru9I | TTAA | 2 cut(s) | 12, 18 |
| TseFI | GTSAC | 1 cut(s) | 125 |
| TseI | GCWGC | 2 cut(s) | 110, 155 |
| Tsp45I | GTSAC | 1 cut(s) | 125 |
| XapI | RAATTY | 1 cut(s) | 79 |
| XmiI | GTMKAC | 1 cut(s) | 204 |
| XspI | CTAG | 2 cut(s) | 98, 298 |