FvH4_5g33581

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000093
Physical Location & Seq
Reverse (-)
24318694 .. 24320980
2287 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g33581.t1

Sequence Viewer

Length: 1029 bp
ATGGGTGGCGGTATTCTTATAGATGGGGCTTTACCTCCATCGTCCCCTCAGCTGGTTGACTCTCTAATTGACTGGGACACTCATACTTGGCGTCTTGATGGAGTAGCCAATGTACTCAGCCGAGAGGCTGAGGATCGGATTCGCTGTATCCCTATTGGGGAGGAGGATGGGAATGATAGACTATTATGGCCTTGGAGTAAAAATGGATCTTTCACTGTTAAATCTGGCTATCATTGGTTACATCAACAAAGCTCCATGAATGCAAGTCCTCTGGTTATTACTGGGACATCGCATAGAGTTGGTAAGAAGATGTGGAGACTTTTGTGGGGAATGCCGACTCTACCTAAGTACCTGAAGATTAATTGTGATGCCTCTTGGAACCCAAGTTTGAATGTGGGTCTGGGAATAGTGATTCGGGATCATTCTGGAGCTTTAGTTGGTGGTGCTTCAATGAGGATTCGTTGTTCTTCACCGAAAATTGCAGAGGCGGAGGCCATCCTCCTTGGTGCATCTACTGCAGCCTCTAACAGGTGGAGGAAAGTGGTATTAGAGTCAGACTCTCAAGCAATTATTGAGGAGTGCCGGAATCGGAAGAACAAGAACTGGAAAATTTACCCGATCATAAGTCGAATCCGGAAGCTGTGTTCGAGGTTCGCCGATTGCATCTGGAGCTGGGCTCCGCGTGAAGCGAATGGCGCCGCCCACTGTGCCGCCGCGCTTGCCTCTCGGACTGTGGGTCTGAAAAGATGGGCTCACCAGCCACCACGGTCCATGATCTCTGTACTCAGAAATGACAGTCTCCCTTGTCCTCCGCTGGGGATGGAAAGTTGGAAACAAGGCAGTGGACTAGGGAAGGATGAGCAGGGCATCCTAGAACCGTGGAAGATACCAGAAAAGGCTGGGAGTAGTTGTGAGGACAGCAAGATGGCAGGTAAAACGGAAGATAAAGGTGCAAGGAAAAGTGAAGACAAAGTTCCTGAGAAAGCTGAAGTCAAAGCTGCACAGAAAATAGAAGATGATAATCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

343

Amino Acids

37.76

Weight (kDa)

9.09

Isoelectric Point (pI)

47.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_3 PF13456 121 - 240 4.3e-24 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000093)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G09490
fragaria_vesca FvH4_1g23791 FvH4_2g01641 FvH4_2g04612 FvH4_2g06831 FvH4_2g07841 FvH4_2g13581 FvH4_2g27220 FvH4_2g30621 FvH4_2g34753 FvH4_3g10392 FvH4_3g24291 FvH4_3g25030 FvH4_3g29361 FvH4_3g31372 FvH4_3g32402 FvH4_3g43651 FvH4_4g03830 FvH4_4g05481 FvH4_4g20431 FvH4_4g21421 FvH4_4g25931 FvH4_5g08801 FvH4_5g21021 FvH4_5g26254 FvH4_5g30931 FvH4_5g31281 FvH4_5g33581 FvH4_5g35622 FvH4_6g02100 FvH4_6g07963 FvH4_6g11620 FvH4_6g16031 FvH4_6g19041 FvH4_6g24211 FvH4_6g24271 FvH4_6g30670 FvH4_6g49540 FvH4_7g25914
malus_domestica MD03G1245200.v1.1 MD04G1168000.v1.1 MD09G1242600.v1.1 MD15G1334000.v1.1 MD17G1165700.v1.1
prunus_persica Prupe.1G073500_v2.0.a1 Prupe.1G283700_v2.0.a1 Prupe.1G524100_v2.0.a1 Prupe.2G022700_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G022800_v2.0.a1 Prupe.2G044300_v2.0.a1 Prupe.2G048800_v2.0.a1 Prupe.2G092000_v2.0.a1 Prupe.2G216500_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.2G216600_v2.0.a1 Prupe.3G103400_v2.0.a1 Prupe.3G143300_v2.0.a1 Prupe.3G190000_v2.0.a1 Prupe.3G219800_v2.0.a1 Prupe.4G177800_v2.0.a1 Prupe.4G261300_v2.0.a1 Prupe.5G044600_v2.0.a1 Prupe.5G067400_v2.0.a1 Prupe.7G083900_v2.0.a1 Prupe.7G120900_v2.0.a1 Prupe.8G032200_v2.0.a1 Prupe.8G036100_v2.0.a1 Prupe.8G042700_v2.0.a1
pyrus_communis pycom01g21710 pycom02g19770 pycom03g05120 pycom05g01370 pycom05g08780 pycom05g10120 pycom07g01370 pycom07g05930 pycom08g15760 pycom08g18090 pycom08g21060 pycom09g03880 pycom10g03870 pycom13g22240 pycom16g05120 pycom16g17170 pycom17g12180 pycom17g16290 pycom17g21230 pycom17g24990 pycom215g00100
rosa_chinensis RchiOBHm_Chr1g0323031 RchiOBHm_Chr1g0324391 RchiOBHm_Chr1g0326401 RchiOBHm_Chr1g0327811 RchiOBHm_Chr1g0332521 RchiOBHm_Chr1g0336501 RchiOBHm_Chr1g0346021 RchiOBHm_Chr1g0347191 RchiOBHm_Chr1g0367181 RchiOBHm_Chr2g0089441 RchiOBHm_Chr2g0115441 RchiOBHm_Chr3g0490691 RchiOBHm_Chr4g0395251 RchiOBHm_Chr4g0398081 RchiOBHm_Chr4g0409451 RchiOBHm_Chr4g0413041 RchiOBHm_Chr4g0415471 RchiOBHm_Chr4g0420961 RchiOBHm_Chr5g0040301 RchiOBHm_Chr5g0070651 RchiOBHm_Chr6g0263011 RchiOBHm_Chr6g0270721 RchiOBHm_Chr6g0277111 RchiOBHm_Chr7g0179771 RchiOBHm_Chr7g0223051 RchiOBHm_Chr7g0225031 RchiOBHm_Chr7g0225091
rosa_laevigata RLG00000001668 RLG00000001672 RLG00000001676 RLG00000007762 RLG00000008994 RLG00000011117 RLG00000013729 RLG00000013839 RLG00000014759 RLG00000016638 RLG00000018535 RLG00000018614 RLG00000018646 RLG00000020679 RLG00000023337 RLG00000029348 RLG00000035891 RLG00000035912
rosa_multiflora Rmu_co8152500.1_g000001 Rmu_co8203314.1_g000001 Rmu_co8383183.1_g000001 Rmu_sc0000293.1_g000033 Rmu_sc0000367.1_g000226 Rmu_sc0000512.1_g000023 Rmu_sc0000594.1_g000059 Rmu_sc0000654.1_g000022 Rmu_sc0000654.1_g000047 Rmu_sc0000706.1_g000037 Rmu_sc0001348.1_g000008 Rmu_sc0001385.1_g000024 Rmu_sc0001405.1_g000002 Rmu_sc0001521.1_g000048 Rmu_sc0001932.1_g000008 Rmu_sc0001932.1_g000009 Rmu_sc0002535.1_g000011 Rmu_sc0002908.1_g000019 Rmu_sc0003709.1_g000004 Rmu_sc0003882.1_g000054 Rmu_sc0004035.1_g000007 Rmu_sc0004041.1_g000007 Rmu_sc0004288.1_g000011 Rmu_sc0004569.1_g000004 Rmu_sc0004677.1_g000016 Rmu_sc0004834.1_g000010 Rmu_sc0005193.1_g000008 Rmu_sc0005354.1_g000009 Rmu_sc0006514.1_g000021 Rmu_sc0006691.1_g000001 Rmu_sc0006888.1_g000021 Rmu_sc0006889.1_g000013 Rmu_sc0008096.1_g000017 Rmu_sc0008378.1_g000003 Rmu_sc0009127.1_g000005 Rmu_sc0009191.1_g000016 Rmu_sc0009687.1_g000018 Rmu_sc0009709.1_g000005 Rmu_sc0009880.1_g000015 Rmu_sc0011710.1_g000001 Rmu_sc0012615.1_g000004 Rmu_sc0016091.1_g000002 Rmu_sc0022339.1_g000006 Rmu_sc0026537.1_g000002 Rmu_sc0027689.1_g000002 Rmu_sc0036222.1_g000001 Rmu_sc0040890.1_g000001 Rmu_ssc0000148.1_g000006 Rmu_ssc0000151.1_g000017 Rmu_ssc0000404.1_g000018 Rmu_ssc0000449.1_g000009
rosa_roxburghii Rroxscaffold_1G00017760 Rroxscaffold_1G00059150 Rroxscaffold_2G00142560 Rroxscaffold_3G00220440 Rroxscaffold_3G00231700 Rroxscaffold_3G00232400 Rroxscaffold_3G00274510 Rroxscaffold_4G00288790 Rroxscaffold_4G00305680 Rroxscaffold_4G00314880 Rroxscaffold_4G00314900 Rroxscaffold_5G00334590 Rroxscaffold_6G00394110 Rroxscaffold_6G00415860 Rroxscaffold_7G00168240 Rroxscaffold_7G00204400 Rroxscaffold_7G00207840
rosa_rugosa Rorug01G0034900 Rorug02G0079500 Rorug02G0229000 Rorug02G0229100 Rorug02G0291400 Rorug02G0298800 Rorug03G0046400 Rorug03G0064700 Rorug03G0077300 Rorug03G0199000 Rorug03G0200400 Rorug04G0205200 Rorug05G0025400 Rorug05G0127400 Rorug05G0192100 Rorug05G0453400 Rorug05G0538300 Rorug06G0035200 Rorug06G0241000 Rorug06G0268300 Rorug07G0120300 Rorug07G0145000 Rorug07G0209100 Rorug07G0240500 Rorug07G0271700
rosa_samantha Rh1AG179100 Rh1BG106900 Rh1BG163400 Rh1BG163500 Rh1BG323500 Rh2CG447900 Rh2DG503700 Rh3AG293600 Rh3CG229100 Rh3DG221500 Rh4AG106000 Rh4BG267700 Rh4CG062500 Rh4CG090100 Rh4CG114800 Rh5AG038400 Rh5BG395400 Rh5CG441700 Rh5CG572000 Rh6AG222400 Rh6AG264500 Rh6BG137400 Rh6BG225700 Rh6CG144300 Rh6DG087600 Rh6DG096000 Rh6DG362400 Rh6DG390200 Rh7AG207500 Rh7AG324700 Rh7AG388800 Rh7AG437100 Rh7BG019000 Rh7BG374600 Rh7CG028700 Rh7CG341500 Rh7CG408000 Rh7CG408300 Rh7DG354600
rosa_wichuraiana Rw0G009630 Rw0G012170 Rw4G022700 Rw5G028420 Rw5G029490 Rw6G007220 Rw6G007410 Rw6G017880 Rw7G012440 Rw7G021830 Rw7G027490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 920
AccB1I GGYRCC 1 cut(s) 695
AccII CGCG 2 cut(s) 682, 716
AccIII TCCGGA 1 cut(s) 633
AciI CCGC 7 cut(s) 9, 488, 680, 699, 711, 714, 812
AclWI GGATC 3 cut(s) 141, 214, 426
AcsI RAATTY 1 cut(s) 609
AcuI CTGAAG 2 cut(s) 374, 1008
AcyI GRCGYC 2 cut(s) 91, 696
AfaI GTAC 3 cut(s) 114, 350, 783
AfiI CCNNNNNNNGG 4 cut(s) 52, 157, 528, 815
AgsI TTSAA 2 cut(s) 391, 450
AhdI GACNNNNNGTC 1 cut(s) 735
AloI GAACNNNNNNTCC 4 cut(s) 448, 480, 628, 660
AluBI AGCT 7 cut(s) 52, 252, 431, 640, 672, 986, 998
AluI AGCT 7 cut(s) 52, 252, 431, 640, 672, 986, 998
Alw26I GTCTC 2 cut(s) 310, 803
AlwI GGATC 3 cut(s) 141, 214, 426
Aor13HI TCCGGA 1 cut(s) 633
AoxI GGCC 2 cut(s) 188, 492
ApeKI GCWGC 2 cut(s) 518, 998
ApoI RAATTY 1 cut(s) 609
AseI ATTAAT 1 cut(s) 360
AspLEI GCGC 2 cut(s) 698, 718
AspS9I GGNCC 1 cut(s) 768
AsuHPI GGTGA 2 cut(s) 462, 746
AvaII GGWCC 1 cut(s) 768
BaeI ACNNNNGTAYC 2 cut(s) 332, 365
BanI GGYRCC 1 cut(s) 695
BanII GRGCYC 2 cut(s) 679, 754
BbsI GAAGAC 1 cut(s) 972
BbvCI CCTCAGC 2 cut(s) 48, 129
BbvI GCAGC 2 cut(s) 530, 985
BccI CCATC 8 cut(s) 17, 46, 92, 161, 503, 741, 814, 919
BciVI GTATCC 1 cut(s) 158
BcoDI GTCTC 2 cut(s) 310, 803
BfaI CTAG 2 cut(s) 848, 872
BfmI CTRYAG 1 cut(s) 516
BfoI RGCGCY 1 cut(s) 699
BfuAI ACCTGC 1 cut(s) 920
BfuI GTATCC 1 cut(s) 158
BisI GCNGC 5 cut(s) 519, 699, 711, 714, 999
BlsI GCNGC 5 cut(s) 520, 700, 712, 715, 1000
Bme18I GGWCC 1 cut(s) 768
BmeRI GACNNNNNGTC 1 cut(s) 735
BmgT120I GGNCC 1 cut(s) 768
BmiI GGNNCC 3 cut(s) 380, 678, 697
BmrI ACTGGG 2 cut(s) 82, 291
BmsI GCATC 4 cut(s) 358, 518, 672, 876
BmuI ACTGGG 2 cut(s) 82, 291
BpiI GAAGAC 1 cut(s) 972
BplI GAGNNNNNCTC 4 cut(s) 542, 574, 661, 693
BpmI CTGGAG 2 cut(s) 447, 688
Bpu10I CCTNAGC 2 cut(s) 48, 129
BpuEI CTTGAG 1 cut(s) 546
BsaBI GATNNNNATC 1 cut(s) 1020
BsaHI GRCGYC 2 cut(s) 91, 696
BsaJI CCNNGG 4 cut(s) 191, 502, 764, 878
BsaWI WCCGGW 1 cut(s) 633
BsaXI ACNNNNNCTCC 4 cut(s) 420, 450, 895, 925
Bsc4I CCNNNNNNNGG 4 cut(s) 52, 157, 528, 815
Bse1I ACTGG 3 cut(s) 77, 286, 608
Bse8I GATNNNNATC 1 cut(s) 1020
BseAI TCCGGA 1 cut(s) 633
BseDI CCNNGG 4 cut(s) 191, 502, 764, 878
BseGI GGATG 5 cut(s) 172, 495, 825, 862, 867
BseJI GATNNNNATC 1 cut(s) 1020
BseLI CCNNNNNNNGG 4 cut(s) 52, 157, 528, 815
BseMII CTCAG 5 cut(s) 62, 120, 130, 799, 969
BseNI ACTGG 3 cut(s) 77, 286, 608
BseRI GAGGAG 2 cut(s) 176, 590
BseXI GCAGC 2 cut(s) 530, 985
BseYI CCCAGC 3 cut(s) 672, 814, 899
BsgI GTGCAG 1 cut(s) 984
Bsh1236I CGCG 2 cut(s) 682, 716
BshFI GGCC 2 cut(s) 190, 494
BshNI GGYRCC 1 cut(s) 695
BsiSI CCGG 2 cut(s) 583, 634
BslFI GGGAC 3 cut(s) 28, 89, 298
BslI CCNNNNNNNGG 4 cut(s) 52, 157, 528, 815
BsmAI GTCTC 2 cut(s) 310, 803
BsmFI GGGAC 3 cut(s) 28, 89, 298
BsmI GAATGC 2 cut(s) 265, 336
BsnI GGCC 2 cut(s) 190, 494
Bsp1286I GDGCHC 2 cut(s) 679, 754
Bsp13I TCCGGA 1 cut(s) 633
Bsp143I GATC 5 cut(s) 133, 206, 418, 618, 774
BspACI CCGC 7 cut(s) 9, 488, 680, 699, 711, 714, 812
BspANI GGCC 2 cut(s) 190, 494
BspCNI CTCAG 5 cut(s) 61, 121, 129, 798, 970
BspEI TCCGGA 1 cut(s) 633
BspFNI CGCG 2 cut(s) 682, 716
BspLI GGNNCC 3 cut(s) 380, 678, 697
BspMAI CTGCAG 1 cut(s) 520
BspMI ACCTGC 1 cut(s) 920
BspPI GGATC 3 cut(s) 141, 214, 426
BspT107I GGYRCC 1 cut(s) 695
BsrI ACTGG 3 cut(s) 77, 286, 608
BssECI CCNNGG 4 cut(s) 191, 502, 764, 878
BssMI GATC 5 cut(s) 133, 206, 418, 618, 774
BssNI GRCGYC 2 cut(s) 91, 696
BssT1I CCWWGG 2 cut(s) 191, 502
Bst4CI ACNGT 6 cut(s) 217, 707, 733, 768, 797, 879
BstACI GRCGYC 2 cut(s) 91, 696
BstAPI GCANNNNNTGC 1 cut(s) 515
BstC8I GCNNGC 1 cut(s) 720
BstDEI CTNAG 6 cut(s) 48, 116, 129, 345, 785, 978
BstDSI CCRYGG 2 cut(s) 764, 878
BstENI CCTNNNNNAGG 1 cut(s) 526
BstF5I GGATG 5 cut(s) 172, 495, 825, 862, 867
BstFNI CGCG 2 cut(s) 682, 716
BstH2I RGCGCY 1 cut(s) 699
BstHHI GCGC 2 cut(s) 698, 718
BstKTI GATC 5 cut(s) 136, 209, 421, 621, 777
BstMAI GTCTC 2 cut(s) 310, 803
BstMBI GATC 5 cut(s) 133, 206, 418, 618, 774
BstMWI GCNNNNNNNGC 5 cut(s) 515, 669, 695, 707, 719
BstSFI CTRYAG 1 cut(s) 516
BstUI CGCG 2 cut(s) 682, 716
BstV1I GCAGC 2 cut(s) 530, 985
BstV2I GAAGAC 1 cut(s) 972
BstX2I RGATCY 1 cut(s) 206
BstYI RGATCY 1 cut(s) 206
BsuI GTATCC 1 cut(s) 158
BsuRI GGCC 2 cut(s) 190, 494
BtgI CCRYGG 2 cut(s) 764, 878
BtgZI GCGATG 1 cut(s) 273
BtsCI GGATG 5 cut(s) 172, 495, 825, 862, 867
BtsI GCAGTG 1 cut(s) 847
BtsIMutI CAGTG 3 cut(s) 213, 703, 847
BveI ACCTGC 1 cut(s) 920
Cac8I GCNNGC 1 cut(s) 720
CfoI GCGC 2 cut(s) 698, 718
Cfr13I GGNCC 1 cut(s) 768
CseI GACGC 1 cut(s) 80
Csp6I GTAC 3 cut(s) 113, 349, 782
CviAII CATG 2 cut(s) 256, 772
CviQI GTAC 3 cut(s) 113, 349, 782
DdeI CTNAG 6 cut(s) 48, 116, 129, 345, 785, 978
DinI GGCGCC 1 cut(s) 697
DpnI GATC 5 cut(s) 135, 208, 420, 620, 776
DpnII GATC 5 cut(s) 133, 206, 418, 618, 774
DriI GACNNNNNGTC 1 cut(s) 735
Eam1105I GACNNNNNGTC 1 cut(s) 735
EciI GGCGGA 1 cut(s) 503
Eco130I CCWWGG 2 cut(s) 191, 502
Eco24I GRGCYC 2 cut(s) 679, 754
Eco47I GGWCC 1 cut(s) 768
Eco57I CTGAAG 2 cut(s) 374, 1008
EcoNI CCTNNNNNAGG 1 cut(s) 526
EcoT14I CCWWGG 2 cut(s) 191, 502
EcoT38I GRGCYC 2 cut(s) 679, 754
EgeI GGCGCC 1 cut(s) 697
EheI GGCGCC 1 cut(s) 697
ErhI CCWWGG 2 cut(s) 191, 502
FaeI CATG 2 cut(s) 259, 775
FaiI YATR 7 cut(s) 20, 84, 187, 257, 294, 623, 773
FaqI GGGAC 3 cut(s) 28, 89, 298
FatI CATG 2 cut(s) 255, 771
Fnu4HI GCNGC 5 cut(s) 519, 699, 711, 714, 999
FokI GGATG 5 cut(s) 179, 482, 832, 854, 869
FriOI GRGCYC 2 cut(s) 679, 754
Fsp4HI GCNGC 5 cut(s) 519, 699, 711, 714, 999
FspBI CTAG 2 cut(s) 848, 872
GlaI GCGC 2 cut(s) 697, 717
GluI GCNGC 5 cut(s) 519, 699, 711, 714, 999
GsaI CCCAGC 3 cut(s) 676, 818, 903
GsuI CTGGAG 2 cut(s) 447, 688
HaeII RGCGCY 1 cut(s) 699
HaeIII GGCC 2 cut(s) 190, 494
HapII CCGG 2 cut(s) 583, 634
HgaI GACGC 1 cut(s) 80
HhaI GCGC 2 cut(s) 698, 718
Hin1I GRCGYC 2 cut(s) 91, 696
Hin1II CATG 2 cut(s) 259, 775
Hin6I GCGC 2 cut(s) 696, 716
HinP1I GCGC 2 cut(s) 696, 716
HincII GTYRAC 1 cut(s) 58
HindII GTYRAC 1 cut(s) 58
HinfI GANTC 9 cut(s) 59, 139, 337, 412, 457, 551, 557, 586, 630
HpaII CCGG 2 cut(s) 583, 634
HphI GGTGA 2 cut(s) 462, 746
Hpy166II GTNNAC 2 cut(s) 58, 845
Hpy188I TCNGA 6 cut(s) 138, 556, 591, 729, 741, 788
Hpy188III TCNNGA 6 cut(s) 95, 416, 426, 634, 667, 977
Hpy8I GTNNAC 2 cut(s) 58, 845
HpyAV CCTTC 1 cut(s) 847
HpyCH4III ACNGT 6 cut(s) 217, 707, 733, 768, 797, 879
HpyCH4V TGCA 7 cut(s) 263, 482, 509, 518, 663, 953, 1001
HpyF10VI GCNNNNNNNGC 5 cut(s) 515, 669, 695, 707, 719
HpyF3I CTNAG 6 cut(s) 48, 116, 129, 345, 785, 978
Hsp92I GRCGYC 2 cut(s) 91, 696
Hsp92II CATG 2 cut(s) 259, 775
HspAI GCGC 2 cut(s) 696, 716
KasI GGCGCC 1 cut(s) 695
Kpn2I TCCGGA 1 cut(s) 633
Kzo9I GATC 5 cut(s) 133, 206, 418, 618, 774
LmnI GCTCC 4 cut(s) 257, 428, 669, 682
Lsp1109I GCAGC 2 cut(s) 530, 985
LweI GCATC 4 cut(s) 358, 518, 672, 876
MaeI CTAG 2 cut(s) 848, 872
MaeIII GTNAC 1 cut(s) 237
MalI GATC 5 cut(s) 135, 208, 420, 620, 776
MboI GATC 5 cut(s) 133, 206, 418, 618, 774
MboII GAAGA 8 cut(s) 319, 367, 459, 604, 895, 953, 977, 1025
MflI RGATCY 1 cut(s) 206
MhlI GDGCHC 2 cut(s) 679, 754
MluCI AATT 5 cut(s) 66, 361, 477, 567, 609
Mly113I GGCGCC 1 cut(s) 696
MlyI GAGTC 4 cut(s) 53, 331, 551, 560
MmeI TCCRAC 1 cut(s) 809
MroI TCCGGA 1 cut(s) 633
MseI TTAA 2 cut(s) 219, 360
MspA1I CMGCKG 2 cut(s) 52, 814
MspI CCGG 2 cut(s) 583, 634
Mva1269I GAATGC 2 cut(s) 265, 336
MvnI CGCG 2 cut(s) 682, 716
MwoI GCNNNNNNNGC 5 cut(s) 515, 669, 695, 707, 719
NarI GGCGCC 1 cut(s) 696
NdeII GATC 5 cut(s) 133, 206, 418, 618, 774
NlaIII CATG 2 cut(s) 259, 775
NlaIV GGNNCC 3 cut(s) 380, 678, 697
NmeAIII GCCGAG 1 cut(s) 146
PctI GAATGC 2 cut(s) 265, 336
PfeI GAWTC 5 cut(s) 139, 412, 457, 586, 630
PkrI GCNGC 5 cut(s) 520, 700, 712, 715, 1000
PleI GAGTC 4 cut(s) 53, 331, 551, 559
PluTI GGCGCC 1 cut(s) 699
PpsI GAGTC 4 cut(s) 53, 331, 551, 559
PshBI ATTAAT 1 cut(s) 360
PspFI CCCAGC 3 cut(s) 672, 814, 899
PspN4I GGNNCC 3 cut(s) 380, 678, 697
PspPI GGNCC 1 cut(s) 768
PstI CTGCAG 1 cut(s) 520
PsuI RGATCY 1 cut(s) 206
PvuII CAGCTG 1 cut(s) 52
RsaI GTAC 3 cut(s) 114, 350, 783
RsaNI GTAC 3 cut(s) 113, 349, 782
SaqAI TTAA 2 cut(s) 219, 360
SatI GCNGC 5 cut(s) 519, 699, 711, 714, 999
Sau3AI GATC 5 cut(s) 133, 206, 418, 618, 774
Sau96I GGNCC 1 cut(s) 768
SchI GAGTC 4 cut(s) 53, 331, 551, 560
SduI GDGCHC 2 cut(s) 679, 754
SfaNI GCATC 4 cut(s) 358, 518, 672, 876
SfcI CTRYAG 1 cut(s) 516
SfoI GGCGCC 1 cut(s) 697
SinI GGWCC 1 cut(s) 768
SmlI CTYRAG 1 cut(s) 561
SmoI CTYRAG 1 cut(s) 561
Sse9I AATT 5 cut(s) 66, 361, 477, 567, 609
SsiI CCGC 7 cut(s) 9, 488, 680, 699, 711, 714, 812
SspDI GGCGCC 1 cut(s) 695
SspMI CTAG 2 cut(s) 848, 872
StyI CCWWGG 2 cut(s) 191, 502
TaaI ACNGT 6 cut(s) 217, 707, 733, 768, 797, 879
TaqI TCGA 2 cut(s) 628, 647
TasI AATT 5 cut(s) 66, 361, 477, 567, 609
TatI WGTACW 2 cut(s) 112, 781
TauI GCSGC 3 cut(s) 701, 713, 716
TfiI GAWTC 5 cut(s) 139, 412, 457, 586, 630
Tru1I TTAA 2 cut(s) 219, 360
Tru9I TTAA 2 cut(s) 219, 360
TscAI CASTG 3 cut(s) 220, 710, 847
TseI GCWGC 2 cut(s) 518, 998
TspDTI ATGAA 1 cut(s) 272
TspGWI ACGGA 1 cut(s) 953
TspRI CASTG 3 cut(s) 220, 710, 847
VpaK11BI GGWCC 1 cut(s) 768
VspI ATTAAT 1 cut(s) 360
XagI CCTNNNNNAGG 1 cut(s) 526
XapI RAATTY 1 cut(s) 609
XspI CTAG 2 cut(s) 848, 872
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.