ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 190 |
| AccII | CGCG | 1 cut(s) | 188 |
| AciI | CCGC | 1 cut(s) | 188 |
| AcsI | RAATTY | 2 cut(s) | 66, 130 |
| AdeI | CACNNNGTG | 1 cut(s) | 190 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 190, 210 |
| AgsI | TTSAA | 2 cut(s) | 10, 73 |
| AluBI | AGCT | 1 cut(s) | 125 |
| AluI | AGCT | 1 cut(s) | 125 |
| Alw26I | GTCTC | 1 cut(s) | 163 |
| AoxI | GGCC | 3 cut(s) | 192, 231, 239 |
| ApeKI | GCWGC | 1 cut(s) | 179 |
| ApoI | RAATTY | 2 cut(s) | 66, 130 |
| AspS9I | GGNCC | 2 cut(s) | 218, 231 |
| AvaII | GGWCC | 1 cut(s) | 218 |
| BbvCI | CCTCAGC | 1 cut(s) | 222 |
| BbvI | GCAGC | 1 cut(s) | 166 |
| BccI | CCATC | 4 cut(s) | 56, 141, 222, 269 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 69, 103 |
| BcoDI | GTCTC | 1 cut(s) | 163 |
| BfaI | CTAG | 1 cut(s) | 162 |
| BisI | GCNGC | 1 cut(s) | 180 |
| BlsI | GCNGC | 1 cut(s) | 181 |
| Bme18I | GGWCC | 1 cut(s) | 218 |
| BmgT120I | GGNCC | 2 cut(s) | 218, 231 |
| BmiI | GGNNCC | 1 cut(s) | 219 |
| BmsI | GCATC | 1 cut(s) | 97 |
| Bpu10I | CCTNAGC | 1 cut(s) | 222 |
| BpuEI | CTTGAG | 1 cut(s) | 47 |
| BsaI | GGTCTC | 1 cut(s) | 163 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 190, 210 |
| Bse1I | ACTGG | 1 cut(s) | 297 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 190, 210 |
| BseMII | CTCAG | 1 cut(s) | 236 |
| BseNI | ACTGG | 1 cut(s) | 297 |
| BseXI | GCAGC | 1 cut(s) | 166 |
| Bsh1236I | CGCG | 1 cut(s) | 188 |
| Bsh1285I | CGRYCG | 1 cut(s) | 89 |
| BshFI | GGCC | 3 cut(s) | 194, 233, 241 |
| BsiEI | CGRYCG | 1 cut(s) | 89 |
| BsiSI | CCGG | 1 cut(s) | 138 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 190, 210 |
| BsmAI | GTCTC | 1 cut(s) | 163 |
| BsnI | GGCC | 3 cut(s) | 194, 233, 241 |
| Bso31I | GGTCTC | 1 cut(s) | 163 |
| BspACI | CCGC | 1 cut(s) | 188 |
| BspANI | GGCC | 3 cut(s) | 194, 233, 241 |
| BspCNI | CTCAG | 1 cut(s) | 235 |
| BspFNI | CGCG | 1 cut(s) | 188 |
| BspLI | GGNNCC | 1 cut(s) | 219 |
| BspTNI | GGTCTC | 1 cut(s) | 163 |
| BsrI | ACTGG | 1 cut(s) | 297 |
| Bst4CI | ACNGT | 1 cut(s) | 77 |
| BstC8I | GCNNGC | 1 cut(s) | 123 |
| BstDEI | CTNAG | 2 cut(s) | 143, 222 |
| BstFNI | CGCG | 1 cut(s) | 188 |
| BstMAI | GTCTC | 1 cut(s) | 163 |
| BstMCI | CGRYCG | 1 cut(s) | 89 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 10, 19, 185, 200 |
| BstUI | CGCG | 1 cut(s) | 188 |
| BstV1I | GCAGC | 1 cut(s) | 166 |
| BsuRI | GGCC | 3 cut(s) | 194, 233, 241 |
| BtgZI | GCGATG | 1 cut(s) | 241 |
| BtsIMutI | CAGTG | 1 cut(s) | 290 |
| Cac8I | GCNNGC | 1 cut(s) | 123 |
| Cfr13I | GGNCC | 2 cut(s) | 218, 231 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 279 |
| CviAII | CATG | 2 cut(s) | 260, 302 |
| CviJI | RGCY | 6 cut(s) | 13, 22, 125, 194, 233, 241 |
| CviKI_1 | RGCY | 6 cut(s) | 13, 22, 125, 194, 233, 241 |
| DdeI | CTNAG | 2 cut(s) | 143, 222 |
| DraIII | CACNNNGTG | 1 cut(s) | 190 |
| Eco31I | GGTCTC | 1 cut(s) | 163 |
| Eco47I | GGWCC | 1 cut(s) | 218 |
| EcoO109I | RGGNCCY | 1 cut(s) | 218 |
| FaeI | CATG | 2 cut(s) | 263, 305 |
| FaiI | YATR | 2 cut(s) | 261, 303 |
| FatI | CATG | 2 cut(s) | 259, 301 |
| Fnu4HI | GCNGC | 1 cut(s) | 180 |
| Fsp4HI | GCNGC | 1 cut(s) | 180 |
| FspBI | CTAG | 1 cut(s) | 162 |
| GluI | GCNGC | 1 cut(s) | 180 |
| HaeIII | GGCC | 3 cut(s) | 194, 233, 241 |
| HapII | CCGG | 1 cut(s) | 138 |
| Hin1II | CATG | 2 cut(s) | 263, 305 |
| HinfI | GANTC | 1 cut(s) | 279 |
| HpaII | CCGG | 1 cut(s) | 138 |
| Hpy188I | TCNGA | 4 cut(s) | 102, 129, 210, 274 |
| Hpy188III | TCNNGA | 2 cut(s) | 26, 162 |
| Hpy99I | CGWCG | 1 cut(s) | 120 |
| HpyAV | CCTTC | 1 cut(s) | 161 |
| HpyCH4III | ACNGT | 1 cut(s) | 77 |
| HpyCH4IV | ACGT | 1 cut(s) | 42 |
| HpyCH4V | TGCA | 3 cut(s) | 39, 80, 301 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 10, 19, 185, 200 |
| HpyF3I | CTNAG | 2 cut(s) | 143, 222 |
| HpySE526I | ACGT | 1 cut(s) | 42 |
| Hsp92II | CATG | 2 cut(s) | 263, 305 |
| LpnPI | CCDG | 2 cut(s) | 151, 278 |
| Lsp1109I | GCAGC | 1 cut(s) | 166 |
| LweI | GCATC | 1 cut(s) | 97 |
| MaeI | CTAG | 1 cut(s) | 162 |
| MaeII | ACGT | 1 cut(s) | 42 |
| MboII | GAAGA | 3 cut(s) | 62, 71, 248 |
| MluCI | AATT | 3 cut(s) | 34, 66, 130 |
| MlyI | GAGTC | 1 cut(s) | 273 |
| MnlI | CCTC | 9 cut(s) | 22, 25, 33, 40, 108, 204, 205, 231, 259 |
| MspI | CCGG | 1 cut(s) | 138 |
| MvnI | CGCG | 1 cut(s) | 188 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 10, 19, 185, 200 |
| NlaIII | CATG | 2 cut(s) | 263, 305 |
| NlaIV | GGNNCC | 1 cut(s) | 219 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 190 |
| PkrI | GCNGC | 1 cut(s) | 181 |
| PleI | GAGTC | 1 cut(s) | 273 |
| PpsI | GAGTC | 1 cut(s) | 273 |
| PpuMI | RGGWCCY | 1 cut(s) | 218 |
| Psp5II | RGGWCCY | 1 cut(s) | 218 |
| PspN4I | GGNNCC | 1 cut(s) | 219 |
| PspPI | GGNCC | 2 cut(s) | 218, 231 |
| PspPPI | RGGWCCY | 1 cut(s) | 218 |
| SatI | GCNGC | 1 cut(s) | 180 |
| Sau96I | GGNCC | 2 cut(s) | 218, 231 |
| SchI | GAGTC | 1 cut(s) | 273 |
| SetI | ASST | 2 cut(s) | 45, 127 |
| SfaNI | GCATC | 1 cut(s) | 97 |
| SinI | GGWCC | 1 cut(s) | 218 |
| SmlI | CTYRAG | 1 cut(s) | 26 |
| SmoI | CTYRAG | 1 cut(s) | 26 |
| Sse9I | AATT | 3 cut(s) | 34, 66, 130 |
| SsiI | CCGC | 1 cut(s) | 188 |
| SspMI | CTAG | 1 cut(s) | 162 |
| TaaI | ACNGT | 1 cut(s) | 77 |
| TaiI | ACGT | 1 cut(s) | 45 |
| TaqI | TCGA | 2 cut(s) | 57, 89 |
| TaqII | GACCGA | 1 cut(s) | 75 |
| TasI | AATT | 3 cut(s) | 34, 66, 130 |
| TscAI | CASTG | 1 cut(s) | 297 |
| TseI | GCWGC | 1 cut(s) | 179 |
| TspDTI | ATGAA | 1 cut(s) | 248 |
| TspRI | CASTG | 1 cut(s) | 297 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 190 |
| VpaK11BI | GGWCC | 1 cut(s) | 218 |
| XapI | RAATTY | 2 cut(s) | 66, 130 |
| XbaI | TCTAGA | 1 cut(s) | 161 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 211 |
| XspI | CTAG | 1 cut(s) | 162 |