Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 101, 358 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 261 |
| AgsI | TTSAA | 3 cut(s) | 40, 223, 311 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 77, 109 |
| AluBI | AGCT | 2 cut(s) | 149, 167 |
| AluI | AGCT | 2 cut(s) | 149, 167 |
| AoxI | GGCC | 1 cut(s) | 123 |
| ApeKI | GCWGC | 2 cut(s) | 65, 140 |
| AspS9I | GGNCC | 2 cut(s) | 124, 335 |
| AsuII | TTCGAA | 1 cut(s) | 83 |
| AvaII | GGWCC | 1 cut(s) | 335 |
| BbvI | GCAGC | 2 cut(s) | 77, 127 |
| BccI | CCATC | 1 cut(s) | 115 |
| BfmI | CTRYAG | 1 cut(s) | 141 |
| BisI | GCNGC | 3 cut(s) | 66, 141, 359 |
| BlsI | GCNGC | 3 cut(s) | 67, 142, 360 |
| Bme18I | GGWCC | 1 cut(s) | 335 |
| BmgT120I | GGNCC | 2 cut(s) | 124, 335 |
| BmiI | GGNNCC | 1 cut(s) | 126 |
| BmsI | GCATC | 2 cut(s) | 16, 38 |
| Bpu14I | TTCGAA | 1 cut(s) | 83 |
| BpuEI | CTTGAG | 1 cut(s) | 275 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 261 |
| Bse1I | ACTGG | 1 cut(s) | 331 |
| Bse3DI | GCAATG | 1 cut(s) | 141 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 261 |
| BseMI | GCAATG | 1 cut(s) | 141 |
| BseNI | ACTGG | 1 cut(s) | 331 |
| BseXI | GCAGC | 2 cut(s) | 77, 127 |
| BshFI | GGCC | 1 cut(s) | 125 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 261 |
| BsmI | GAATGC | 1 cut(s) | 10 |
| BsnI | GGCC | 1 cut(s) | 125 |
| Bsp119I | TTCGAA | 1 cut(s) | 83 |
| BspACI | CCGC | 2 cut(s) | 101, 358 |
| BspANI | GGCC | 1 cut(s) | 125 |
| BspLI | GGNNCC | 1 cut(s) | 126 |
| BspMAI | CTGCAG | 1 cut(s) | 145 |
| BspT104I | TTCGAA | 1 cut(s) | 83 |
| BsrDI | GCAATG | 1 cut(s) | 141 |
| BsrI | ACTGG | 1 cut(s) | 331 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 71, 140, 355 |
| BstBI | TTCGAA | 1 cut(s) | 83 |
| BstC8I | GCNNGC | 1 cut(s) | 103 |
| BstDEI | CTNAG | 1 cut(s) | 241 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 71, 107, 131, 140, 146, 355 |
| BstSFI | CTRYAG | 1 cut(s) | 141 |
| BstV1I | GCAGC | 2 cut(s) | 77, 127 |
| BsuRI | GGCC | 1 cut(s) | 125 |
| Cac8I | GCNNGC | 1 cut(s) | 103 |
| Cfr13I | GGNCC | 2 cut(s) | 124, 335 |
| CviAII | CATG | 1 cut(s) | 33 |
| CviJI | RGCY | 6 cut(s) | 125, 140, 149, 155, 167, 254 |
| CviKI_1 | RGCY | 6 cut(s) | 125, 140, 149, 155, 167, 254 |
| DdeI | CTNAG | 1 cut(s) | 241 |
| Eco47I | GGWCC | 1 cut(s) | 335 |
| EcoT22I | ATGCAT | 1 cut(s) | 31 |
| FaeI | CATG | 1 cut(s) | 36 |
| FaiI | YATR | 6 cut(s) | 34, 55, 57, 170, 227, 365 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 33, 65 |
| FatI | CATG | 1 cut(s) | 32 |
| FauI | CCCGC | 1 cut(s) | 94 |
| Fnu4HI | GCNGC | 3 cut(s) | 66, 141, 359 |
| Fsp4HI | GCNGC | 3 cut(s) | 66, 141, 359 |
| GluI | GCNGC | 3 cut(s) | 66, 141, 359 |
| HaeIII | GGCC | 1 cut(s) | 125 |
| Hin1II | CATG | 1 cut(s) | 36 |
| HindIII | AAGCTT | 1 cut(s) | 147 |
| HinfI | GANTC | 2 cut(s) | 44, 80 |
| Hpy166II | GTNNAC | 1 cut(s) | 335 |
| Hpy188I | TCNGA | 2 cut(s) | 217, 264 |
| Hpy8I | GTNNAC | 1 cut(s) | 335 |
| HpyAV | CCTTC | 1 cut(s) | 138 |
| HpyCH4V | TGCA | 5 cut(s) | 29, 134, 143, 196, 318 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 71, 107, 131, 140, 146, 355 |
| HpyF3I | CTNAG | 1 cut(s) | 241 |
| Hsp92II | CATG | 1 cut(s) | 36 |
| LpnPI | CCDG | 4 cut(s) | 269, 282, 312, 328 |
| Lsp1109I | GCAGC | 2 cut(s) | 77, 127 |
| LweI | GCATC | 2 cut(s) | 16, 38 |
| MboII | GAAGA | 1 cut(s) | 204 |
| MfeI | CAATTG | 1 cut(s) | 69 |
| MluCI | AATT | 1 cut(s) | 69 |
| MlyI | GAGTC | 1 cut(s) | 38 |
| Mph1103I | ATGCAT | 1 cut(s) | 31 |
| MseI | TTAA | 1 cut(s) | 323 |
| MunI | CAATTG | 1 cut(s) | 69 |
| Mva1269I | GAATGC | 1 cut(s) | 10 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 71, 107, 131, 140, 146, 355 |
| NlaIII | CATG | 1 cut(s) | 36 |
| NlaIV | GGNNCC | 1 cut(s) | 126 |
| NsiI | ATGCAT | 1 cut(s) | 31 |
| NspV | TTCGAA | 1 cut(s) | 83 |
| PctI | GAATGC | 1 cut(s) | 10 |
| PfeI | GAWTC | 1 cut(s) | 80 |
| PkrI | GCNGC | 3 cut(s) | 67, 142, 360 |
| PleI | GAGTC | 1 cut(s) | 38 |
| PpsI | GAGTC | 1 cut(s) | 38 |
| PspN4I | GGNNCC | 1 cut(s) | 126 |
| PspPI | GGNCC | 2 cut(s) | 124, 335 |
| PstI | CTGCAG | 1 cut(s) | 145 |
| SaqAI | TTAA | 1 cut(s) | 323 |
| SatI | GCNGC | 3 cut(s) | 66, 141, 359 |
| Sau96I | GGNCC | 2 cut(s) | 124, 335 |
| SchI | GAGTC | 1 cut(s) | 38 |
| SetI | ASST | 2 cut(s) | 151, 169 |
| SfaNI | GCATC | 2 cut(s) | 16, 38 |
| SfcI | CTRYAG | 1 cut(s) | 141 |
| SfuI | TTCGAA | 1 cut(s) | 83 |
| SinI | GGWCC | 1 cut(s) | 335 |
| SmlI | CTYRAG | 1 cut(s) | 290 |
| SmoI | CTYRAG | 1 cut(s) | 290 |
| Sse9I | AATT | 1 cut(s) | 69 |
| SsiI | CCGC | 2 cut(s) | 101, 358 |
| SspI | AATATT | 1 cut(s) | 282 |
| TaqI | TCGA | 1 cut(s) | 83 |
| TasI | AATT | 1 cut(s) | 69 |
| TauI | GCSGC | 1 cut(s) | 361 |
| TfiI | GAWTC | 1 cut(s) | 80 |
| Tru1I | TTAA | 1 cut(s) | 323 |
| Tru9I | TTAA | 1 cut(s) | 323 |
| TseI | GCWGC | 2 cut(s) | 65, 140 |
| TspDTI | ATGAA | 2 cut(s) | 17, 196 |
| TspGWI | ACGGA | 1 cut(s) | 180 |
| VpaK11BI | GGWCC | 1 cut(s) | 335 |
| Zsp2I | ATGCAT | 1 cut(s) | 31 |