Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 172 |
| AciI | CCGC | 2 cut(s) | 170, 200 |
| AclWI | GGATC | 3 cut(s) | 158, 160, 173 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 93, 237, 238 |
| AjnI | CCWGG | 1 cut(s) | 292 |
| AluBI | AGCT | 2 cut(s) | 65, 179 |
| AluI | AGCT | 2 cut(s) | 65, 179 |
| Alw21I | GWGCWC | 1 cut(s) | 230 |
| Alw26I | GTCTC | 1 cut(s) | 129 |
| AlwI | GGATC | 3 cut(s) | 158, 160, 173 |
| AoxI | GGCC | 4 cut(s) | 3, 248, 286, 296 |
| ApeKI | GCWGC | 2 cut(s) | 188, 197 |
| AspS9I | GGNCC | 2 cut(s) | 249, 296 |
| AsuHPI | GGTGA | 1 cut(s) | 119 |
| BamHI | GGATCC | 1 cut(s) | 165 |
| Bbv12I | GWGCWC | 1 cut(s) | 230 |
| BbvI | GCAGC | 2 cut(s) | 175, 209 |
| BccI | CCATC | 1 cut(s) | 278 |
| BciT130I | CCWGG | 1 cut(s) | 294 |
| BclI | TGATCA | 1 cut(s) | 111 |
| BcoDI | GTCTC | 1 cut(s) | 129 |
| BisI | GCNGC | 3 cut(s) | 189, 198, 201 |
| BlsI | GCNGC | 3 cut(s) | 190, 199, 202 |
| Bme1390I | CCNGG | 1 cut(s) | 294 |
| BmgT120I | GGNCC | 2 cut(s) | 249, 296 |
| BmiI | GGNNCC | 2 cut(s) | 167, 251 |
| BmrFI | CCNGG | 1 cut(s) | 294 |
| BmsI | GCATC | 1 cut(s) | 184 |
| BpmI | CTGGAG | 1 cut(s) | 56 |
| BsaJI | CCNNGG | 2 cut(s) | 292, 293 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 93, 237, 238 |
| BseBI | CCWGG | 1 cut(s) | 294 |
| BseDI | CCNNGG | 2 cut(s) | 292, 293 |
| BseGI | GGATG | 1 cut(s) | 58 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 93, 237, 238 |
| BseMII | CTCAG | 2 cut(s) | 34, 266 |
| BseRI | GAGGAG | 1 cut(s) | 292 |
| BseXI | GCAGC | 2 cut(s) | 175, 209 |
| Bsh1236I | CGCG | 1 cut(s) | 172 |
| BshFI | GGCC | 4 cut(s) | 5, 250, 288, 298 |
| BsiHKAI | GWGCWC | 1 cut(s) | 230 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 93, 237, 238 |
| BsmAI | GTCTC | 1 cut(s) | 129 |
| BsnI | GGCC | 4 cut(s) | 5, 250, 288, 298 |
| Bsp1286I | GDGCHC | 1 cut(s) | 230 |
| Bsp143I | GATC | 3 cut(s) | 111, 150, 165 |
| BspACI | CCGC | 2 cut(s) | 170, 200 |
| BspANI | GGCC | 4 cut(s) | 5, 250, 288, 298 |
| BspCNI | CTCAG | 2 cut(s) | 33, 267 |
| BspFNI | CGCG | 1 cut(s) | 172 |
| BspLI | GGNNCC | 2 cut(s) | 167, 251 |
| BspPI | GGATC | 3 cut(s) | 158, 160, 173 |
| BssECI | CCNNGG | 2 cut(s) | 292, 293 |
| BssMI | GATC | 3 cut(s) | 111, 150, 165 |
| Bst2UI | CCWGG | 1 cut(s) | 294 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 209 |
| BstDEI | CTNAG | 2 cut(s) | 20, 275 |
| BstF5I | GGATG | 1 cut(s) | 58 |
| BstFNI | CGCG | 1 cut(s) | 172 |
| BstKTI | GATC | 3 cut(s) | 114, 153, 168 |
| BstMAI | GTCTC | 1 cut(s) | 129 |
| BstMBI | GATC | 3 cut(s) | 111, 150, 165 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 185, 194, 197, 209 |
| BstNI | CCWGG | 1 cut(s) | 294 |
| BstSCI | CCNGG | 1 cut(s) | 292 |
| BstUI | CGCG | 1 cut(s) | 172 |
| BstV1I | GCAGC | 2 cut(s) | 175, 209 |
| BstX2I | RGATCY | 1 cut(s) | 165 |
| BstYI | RGATCY | 1 cut(s) | 165 |
| BsuRI | GGCC | 4 cut(s) | 5, 250, 288, 298 |
| BtsCI | GGATG | 1 cut(s) | 58 |
| Cfr13I | GGNCC | 2 cut(s) | 249, 296 |
| CviAII | CATG | 1 cut(s) | 146 |
| CviJI | RGCY | 6 cut(s) | 5, 65, 179, 250, 288, 298 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 65, 179, 250, 288, 298 |
| DdeI | CTNAG | 2 cut(s) | 20, 275 |
| DpnI | GATC | 3 cut(s) | 113, 152, 167 |
| DpnII | GATC | 3 cut(s) | 111, 150, 165 |
| DraI | TTTAAA | 1 cut(s) | 15 |
| EcoO109I | RGGNCCY | 1 cut(s) | 249 |
| EcoRII | CCWGG | 1 cut(s) | 292 |
| FaeI | CATG | 1 cut(s) | 149 |
| FaiI | YATR | 1 cut(s) | 147 |
| FatI | CATG | 1 cut(s) | 145 |
| FauI | CCCGC | 1 cut(s) | 177 |
| FbaI | TGATCA | 1 cut(s) | 111 |
| Fnu4HI | GCNGC | 3 cut(s) | 189, 198, 201 |
| FokI | GGATG | 1 cut(s) | 65 |
| Fsp4HI | GCNGC | 3 cut(s) | 189, 198, 201 |
| GluI | GCNGC | 3 cut(s) | 189, 198, 201 |
| GsuI | CTGGAG | 1 cut(s) | 56 |
| HaeIII | GGCC | 4 cut(s) | 5, 250, 288, 298 |
| Hin1II | CATG | 1 cut(s) | 149 |
| HinfI | GANTC | 1 cut(s) | 99 |
| HphI | GGTGA | 1 cut(s) | 119 |
| Hpy188I | TCNGA | 2 cut(s) | 82, 276 |
| Hpy188III | TCNNGA | 2 cut(s) | 22, 35 |
| HpyAV | CCTTC | 1 cut(s) | 230 |
| HpyCH4V | TGCA | 2 cut(s) | 48, 197 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 185, 194, 197, 209 |
| HpyF3I | CTNAG | 2 cut(s) | 20, 275 |
| Hsp92II | CATG | 1 cut(s) | 149 |
| Ksp22I | TGATCA | 1 cut(s) | 111 |
| Kzo9I | GATC | 3 cut(s) | 111, 150, 165 |
| LmnI | GCTCC | 1 cut(s) | 233 |
| LpnPI | CCDG | 4 cut(s) | 7, 20, 143, 279 |
| Lsp1109I | GCAGC | 2 cut(s) | 175, 209 |
| LweI | GCATC | 1 cut(s) | 184 |
| MalI | GATC | 3 cut(s) | 113, 152, 167 |
| MboI | GATC | 3 cut(s) | 111, 150, 165 |
| MfeI | CAATTG | 1 cut(s) | 154 |
| MflI | RGATCY | 1 cut(s) | 165 |
| MhlI | GDGCHC | 1 cut(s) | 230 |
| MluCI | AATT | 3 cut(s) | 154, 160, 270 |
| MmeI | TCCRAC | 1 cut(s) | 74 |
| MnlI | CCTC | 7 cut(s) | 16, 31, 88, 213, 268, 270, 299 |
| MseI | TTAA | 1 cut(s) | 14 |
| MspA1I | CMGCKG | 1 cut(s) | 200 |
| MspR9I | CCNGG | 1 cut(s) | 294 |
| MunI | CAATTG | 1 cut(s) | 154 |
| MvaI | CCWGG | 1 cut(s) | 294 |
| MvnI | CGCG | 1 cut(s) | 172 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 185, 194, 197, 209 |
| NdeII | GATC | 3 cut(s) | 111, 150, 165 |
| NlaIII | CATG | 1 cut(s) | 149 |
| NlaIV | GGNNCC | 2 cut(s) | 167, 251 |
| PasI | CCCWGGG | 1 cut(s) | 293 |
| PfeI | GAWTC | 1 cut(s) | 99 |
| PkrI | GCNGC | 3 cut(s) | 190, 199, 202 |
| Psp6I | CCWGG | 1 cut(s) | 292 |
| PspGI | CCWGG | 1 cut(s) | 292 |
| PspN4I | GGNNCC | 2 cut(s) | 167, 251 |
| PspPI | GGNCC | 2 cut(s) | 249, 296 |
| PsuI | RGATCY | 1 cut(s) | 165 |
| SaqAI | TTAA | 1 cut(s) | 14 |
| SatI | GCNGC | 3 cut(s) | 189, 198, 201 |
| Sau3AI | GATC | 3 cut(s) | 111, 150, 165 |
| Sau96I | GGNCC | 2 cut(s) | 249, 296 |
| ScrFI | CCNGG | 1 cut(s) | 294 |
| SduI | GDGCHC | 1 cut(s) | 230 |
| SetI | ASST | 5 cut(s) | 67, 132, 181, 224, 260 |
| SfaNI | GCATC | 1 cut(s) | 184 |
| Sse9I | AATT | 3 cut(s) | 154, 160, 270 |
| SsiI | CCGC | 2 cut(s) | 170, 200 |
| SspI | AATATT | 1 cut(s) | 28 |
| StyD4I | CCNGG | 1 cut(s) | 292 |
| TasI | AATT | 3 cut(s) | 154, 160, 270 |
| TauI | GCSGC | 1 cut(s) | 203 |
| TfiI | GAWTC | 1 cut(s) | 99 |
| Tru1I | TTAA | 1 cut(s) | 14 |
| Tru9I | TTAA | 1 cut(s) | 14 |
| TseI | GCWGC | 2 cut(s) | 188, 197 |
| TspDTI | ATGAA | 1 cut(s) | 134 |