Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 72, 86 |
| AciI | CCGC | 3 cut(s) | 70, 84, 86 |
| AcoI | YGGCCR | 1 cut(s) | 87 |
| AflIII | ACRYGT | 1 cut(s) | 189 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 132 |
| AluBI | AGCT | 4 cut(s) | 36, 65, 94, 98 |
| AluI | AGCT | 4 cut(s) | 36, 65, 94, 98 |
| Alw21I | GWGCWC | 1 cut(s) | 116 |
| Alw44I | GTGCAC | 1 cut(s) | 112 |
| AoxI | GGCC | 2 cut(s) | 87, 172 |
| ApaLI | GTGCAC | 1 cut(s) | 112 |
| ApeKI | GCWGC | 1 cut(s) | 74 |
| AspLEI | GCGC | 1 cut(s) | 74 |
| AspS9I | GGNCC | 2 cut(s) | 126, 134 |
| AsuNHI | GCTAGC | 1 cut(s) | 94 |
| AvaII | GGWCC | 2 cut(s) | 126, 134 |
| BaeGI | GKGCMC | 1 cut(s) | 116 |
| Bbv12I | GWGCWC | 1 cut(s) | 116 |
| BbvI | GCAGC | 1 cut(s) | 61 |
| BccI | CCATC | 1 cut(s) | 164 |
| BfaI | CTAG | 3 cut(s) | 57, 95, 99 |
| BisI | GCNGC | 3 cut(s) | 75, 84, 87 |
| BlsI | GCNGC | 3 cut(s) | 76, 85, 88 |
| Bme18I | GGWCC | 2 cut(s) | 126, 134 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 132 |
| BmgT120I | GGNCC | 2 cut(s) | 126, 134 |
| BmsI | GCATC | 1 cut(s) | 70 |
| BmtI | GCTAGC | 1 cut(s) | 98 |
| BpuEI | CTTGAG | 1 cut(s) | 102 |
| Bsa29I | ATCGAT | 1 cut(s) | 153 |
| BsaAI | YACGTR | 1 cut(s) | 192 |
| BsaJI | CCNNGG | 1 cut(s) | 84 |
| BseCI | ATCGAT | 1 cut(s) | 153 |
| BseDI | CCNNGG | 1 cut(s) | 84 |
| BseSI | GKGCMC | 1 cut(s) | 116 |
| BseXI | GCAGC | 1 cut(s) | 61 |
| BseYI | CCCAGC | 1 cut(s) | 13 |
| Bsh1236I | CGCG | 2 cut(s) | 72, 86 |
| BshFI | GGCC | 2 cut(s) | 89, 174 |
| BshVI | ATCGAT | 1 cut(s) | 153 |
| BsiHKAI | GWGCWC | 1 cut(s) | 116 |
| BsnI | GGCC | 2 cut(s) | 89, 174 |
| Bsp1286I | GDGCHC | 1 cut(s) | 116 |
| Bsp143I | GATC | 1 cut(s) | 150 |
| BspACI | CCGC | 3 cut(s) | 70, 84, 86 |
| BspANI | GGCC | 2 cut(s) | 89, 174 |
| BspDI | ATCGAT | 1 cut(s) | 153 |
| BspFNI | CGCG | 2 cut(s) | 72, 86 |
| BspOI | GCTAGC | 1 cut(s) | 98 |
| BssECI | CCNNGG | 1 cut(s) | 84 |
| BssMI | GATC | 1 cut(s) | 150 |
| BstBAI | YACGTR | 1 cut(s) | 192 |
| BstC8I | GCNNGC | 1 cut(s) | 96 |
| BstDSI | CCRYGG | 1 cut(s) | 84 |
| BstFNI | CGCG | 2 cut(s) | 72, 86 |
| BstHHI | GCGC | 1 cut(s) | 74 |
| BstKTI | GATC | 1 cut(s) | 153 |
| BstMBI | GATC | 1 cut(s) | 150 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 71, 80, 83, 95 |
| BstSLI | GKGCMC | 1 cut(s) | 116 |
| BstUI | CGCG | 2 cut(s) | 72, 86 |
| BstV1I | GCAGC | 1 cut(s) | 61 |
| Bsu15I | ATCGAT | 1 cut(s) | 153 |
| BsuRI | GGCC | 2 cut(s) | 89, 174 |
| BsuTUI | ATCGAT | 1 cut(s) | 153 |
| BtgI | CCRYGG | 1 cut(s) | 84 |
| Cac8I | GCNNGC | 1 cut(s) | 96 |
| CfoI | GCGC | 1 cut(s) | 74 |
| Cfr13I | GGNCC | 2 cut(s) | 126, 134 |
| Cfr42I | CCGCGG | 1 cut(s) | 87 |
| ClaI | ATCGAT | 1 cut(s) | 153 |
| CviAII | CATG | 1 cut(s) | 180 |
| CviJI | RGCY | 6 cut(s) | 36, 65, 89, 94, 98, 174 |
| CviKI_1 | RGCY | 6 cut(s) | 36, 65, 89, 94, 98, 174 |
| DpnI | GATC | 1 cut(s) | 152 |
| DpnII | GATC | 1 cut(s) | 150 |
| DriI | GACNNNNNGTC | 1 cut(s) | 132 |
| EaeI | YGGCCR | 1 cut(s) | 87 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 132 |
| Eco47I | GGWCC | 2 cut(s) | 126, 134 |
| FaeI | CATG | 1 cut(s) | 183 |
| FaiI | YATR | 3 cut(s) | 149, 181, 195 |
| FatI | CATG | 1 cut(s) | 179 |
| Fnu4HI | GCNGC | 3 cut(s) | 75, 84, 87 |
| Fsp4HI | GCNGC | 3 cut(s) | 75, 84, 87 |
| FspBI | CTAG | 3 cut(s) | 57, 95, 99 |
| GlaI | GCGC | 1 cut(s) | 73 |
| GluI | GCNGC | 3 cut(s) | 75, 84, 87 |
| GsaI | CCCAGC | 1 cut(s) | 17 |
| HaeIII | GGCC | 2 cut(s) | 89, 174 |
| HhaI | GCGC | 1 cut(s) | 74 |
| Hin1II | CATG | 1 cut(s) | 183 |
| Hin6I | GCGC | 1 cut(s) | 72 |
| HinP1I | GCGC | 1 cut(s) | 72 |
| HindIII | AAGCTT | 1 cut(s) | 34 |
| Hpy166II | GTNNAC | 2 cut(s) | 114, 185 |
| Hpy188I | TCNGA | 1 cut(s) | 200 |
| Hpy188III | TCNNGA | 1 cut(s) | 49 |
| Hpy8I | GTNNAC | 2 cut(s) | 114, 185 |
| HpyCH4IV | ACGT | 1 cut(s) | 191 |
| HpyCH4V | TGCA | 1 cut(s) | 114 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 71, 80, 83, 95 |
| HpySE526I | ACGT | 1 cut(s) | 191 |
| Hsp92II | CATG | 1 cut(s) | 183 |
| HspAI | GCGC | 1 cut(s) | 72 |
| KspI | CCGCGG | 1 cut(s) | 87 |
| Kzo9I | GATC | 1 cut(s) | 150 |
| LpnPI | CCDG | 1 cut(s) | 34 |
| Lsp1109I | GCAGC | 1 cut(s) | 61 |
| LweI | GCATC | 1 cut(s) | 70 |
| MaeI | CTAG | 3 cut(s) | 57, 95, 99 |
| MaeII | ACGT | 1 cut(s) | 191 |
| MalI | GATC | 1 cut(s) | 152 |
| MboI | GATC | 1 cut(s) | 150 |
| MfeI | CAATTG | 1 cut(s) | 19 |
| MhlI | GDGCHC | 1 cut(s) | 116 |
| MluCI | AATT | 3 cut(s) | 6, 19, 25 |
| MmeI | TCCRAC | 1 cut(s) | 164 |
| MnlI | CCTC | 4 cut(s) | 99, 147, 154, 185 |
| MseI | TTAA | 2 cut(s) | 5, 165 |
| MspA1I | CMGCKG | 1 cut(s) | 86 |
| MunI | CAATTG | 1 cut(s) | 19 |
| MvnI | CGCG | 2 cut(s) | 72, 86 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 71, 80, 83, 95 |
| NdeII | GATC | 1 cut(s) | 150 |
| NheI | GCTAGC | 1 cut(s) | 94 |
| NlaIII | CATG | 1 cut(s) | 183 |
| PkrI | GCNGC | 3 cut(s) | 76, 85, 88 |
| Ppu21I | YACGTR | 1 cut(s) | 192 |
| PspFI | CCCAGC | 1 cut(s) | 13 |
| PspPI | GGNCC | 2 cut(s) | 126, 134 |
| SacII | CCGCGG | 1 cut(s) | 87 |
| SaqAI | TTAA | 2 cut(s) | 5, 165 |
| SatI | GCNGC | 3 cut(s) | 75, 84, 87 |
| Sau3AI | GATC | 1 cut(s) | 150 |
| Sau96I | GGNCC | 2 cut(s) | 126, 134 |
| SduI | GDGCHC | 1 cut(s) | 116 |
| SetI | ASST | 7 cut(s) | 38, 67, 96, 100, 110, 146, 194 |
| SfaNI | GCATC | 1 cut(s) | 70 |
| Sfr303I | CCGCGG | 1 cut(s) | 87 |
| SgrBI | CCGCGG | 1 cut(s) | 87 |
| SinI | GGWCC | 2 cut(s) | 126, 134 |
| SmlI | CTYRAG | 1 cut(s) | 117 |
| SmoI | CTYRAG | 1 cut(s) | 117 |
| Sse9I | AATT | 3 cut(s) | 6, 19, 25 |
| SsiI | CCGC | 3 cut(s) | 70, 84, 86 |
| SspMI | CTAG | 3 cut(s) | 57, 95, 99 |
| TaiI | ACGT | 1 cut(s) | 194 |
| TaqI | TCGA | 1 cut(s) | 153 |
| TasI | AATT | 3 cut(s) | 6, 19, 25 |
| TauI | GCSGC | 2 cut(s) | 86, 89 |
| Tru1I | TTAA | 2 cut(s) | 5, 165 |
| Tru9I | TTAA | 2 cut(s) | 5, 165 |
| TseI | GCWGC | 1 cut(s) | 74 |
| VneI | GTGCAC | 1 cut(s) | 112 |
| VpaK11BI | GGWCC | 2 cut(s) | 126, 134 |
| XspI | CTAG | 3 cut(s) | 57, 95, 99 |