Protein SET DOMAIN GROUP
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G17240 AT5G17240 |
| fragaria_vesca | FvH4_1g27420 |
| malus_domestica | MD07G1015500.v1.1 MD17G1287300.v1.1 |
| prunus_persica | Prupe.3G014000_v2.0.a1 |
| pyrus_communis | pycom07g01180 pycom07g01780 pycom07g01830 pycom07g01860 |
| rosa_chinensis | RchiOBHm_Chr3g0488621 |
| rosa_laevigata | RLG00000022939 |
| rosa_multiflora | Rmu_sc0005363.1_g000050 |
| rosa_roxburghii | Rroxscaffold_6G00394090 |
| rosa_rugosa | Rorug03G0239700 Rorug03G0239800 |
| rosa_samantha | Rh3AG288600 Rh3BG325300 Rh3CG322900 Rh3DG321600 |
| rosa_wichuraiana | Rw3G025540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1362 |
| Acc16I | TGCGCA | 1 cut(s) | 1290 |
| AccB1I | GGYRCC | 1 cut(s) | 339 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 289 |
| AccBSI | CCGCTC | 1 cut(s) | 984 |
| AciI | CCGC | 5 cut(s) | 132, 198, 362, 552, 984 |
| AclWI | GGATC | 1 cut(s) | 1363 |
| AcsI | RAATTY | 2 cut(s) | 355, 395 |
| AcyI | GRCGYC | 1 cut(s) | 780 |
| AfaI | GTAC | 1 cut(s) | 715 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 128, 289, 349, 951 |
| AflII | CTTAAG | 1 cut(s) | 503 |
| AgsI | TTSAA | 6 cut(s) | 37, 457, 1094, 1147, 1169, 1276 |
| AjiI | CACGTC | 1 cut(s) | 724 |
| AjnI | CCWGG | 3 cut(s) | 348, 640, 1371 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1074, 1106 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1337, 1369 |
| Alw21I | GWGCWC | 3 cut(s) | 253, 873, 1233 |
| Alw26I | GTCTC | 2 cut(s) | 115, 612 |
| AlwI | GGATC | 1 cut(s) | 1363 |
| Ama87I | CYCGRG | 1 cut(s) | 1214 |
| AoxI | GGCC | 4 cut(s) | 94, 447, 825, 953 |
| ApeKI | GCWGC | 3 cut(s) | 149, 437, 593 |
| ApoI | RAATTY | 2 cut(s) | 355, 395 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 746, 778 |
| AspLEI | GCGC | 2 cut(s) | 490, 1291 |
| AspS9I | GGNCC | 3 cut(s) | 94, 826, 1435 |
| AsuHPI | GGTGA | 3 cut(s) | 364, 404, 706 |
| AvaI | CYCGRG | 1 cut(s) | 1214 |
| AvaII | GGWCC | 1 cut(s) | 1435 |
| BanI | GGYRCC | 1 cut(s) | 339 |
| BanII | GRGCYC | 1 cut(s) | 1233 |
| BauI | CACGAG | 2 cut(s) | 153, 246 |
| Bbv12I | GWGCWC | 3 cut(s) | 253, 873, 1233 |
| BbvCI | CCTCAGC | 1 cut(s) | 462 |
| BbvI | GCAGC | 3 cut(s) | 136, 424, 605 |
| BccI | CCATC | 1 cut(s) | 1000 |
| BceAI | ACGGC | 2 cut(s) | 44, 92 |
| BciT130I | CCWGG | 3 cut(s) | 350, 642, 1373 |
| BcoDI | GTCTC | 2 cut(s) | 115, 612 |
| BfaI | CTAG | 1 cut(s) | 380 |
| BfrI | CTTAAG | 1 cut(s) | 503 |
| BisI | GCNGC | 4 cut(s) | 150, 362, 438, 594 |
| BlsI | GCNGC | 4 cut(s) | 151, 363, 439, 595 |
| Bme1390I | CCNGG | 3 cut(s) | 350, 642, 1373 |
| Bme18I | GGWCC | 1 cut(s) | 1435 |
| BmeT110I | CYCGRG | 1 cut(s) | 1214 |
| BmgBI | CACGTC | 1 cut(s) | 724 |
| BmgT120I | GGNCC | 3 cut(s) | 94, 826, 1435 |
| BmiI | GGNNCC | 2 cut(s) | 341, 927 |
| BmrFI | CCNGG | 3 cut(s) | 350, 642, 1373 |
| BmsI | GCATC | 3 cut(s) | 53, 415, 580 |
| BpmI | CTGGAG | 2 cut(s) | 663, 878 |
| Bpu10I | CCTNAGC | 1 cut(s) | 462 |
| BpuEI | CTTGAG | 3 cut(s) | 494, 550, 887 |
| BsaHI | GRCGYC | 1 cut(s) | 780 |
| BsaJI | CCNNGG | 2 cut(s) | 584, 921 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 257, 287, 1337, 1342, 1367, 1372 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 128, 289, 349, 951 |
| Bse1I | ACTGG | 2 cut(s) | 72, 723 |
| Bse3DI | GCAATG | 1 cut(s) | 231 |
| BseBI | CCWGG | 3 cut(s) | 350, 642, 1373 |
| BseDI | CCNNGG | 2 cut(s) | 584, 921 |
| BseGI | GGATG | 5 cut(s) | 238, 427, 472, 595, 1244 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 128, 289, 349, 951 |
| BseMI | GCAATG | 1 cut(s) | 231 |
| BseMII | CTCAG | 1 cut(s) | 453 |
| BseNI | ACTGG | 2 cut(s) | 72, 723 |
| BseXI | GCAGC | 3 cut(s) | 136, 424, 605 |
| BseYI | CCCAGC | 1 cut(s) | 596 |
| BsgI | GTGCAG | 1 cut(s) | 621 |
| BshFI | GGCC | 4 cut(s) | 96, 449, 827, 955 |
| BshNI | GGYRCC | 1 cut(s) | 339 |
| BsiHKAI | GWGCWC | 3 cut(s) | 253, 873, 1233 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1214 |
| BsiSI | CCGG | 1 cut(s) | 129 |
| BslFI | GGGAC | 1 cut(s) | 1204 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 128, 289, 349, 951 |
| BsmAI | GTCTC | 2 cut(s) | 115, 612 |
| BsmBI | CGTCTC | 1 cut(s) | 115 |
| BsmFI | GGGAC | 1 cut(s) | 1204 |
| BsnI | GGCC | 4 cut(s) | 96, 449, 827, 955 |
| BsoBI | CYCGRG | 1 cut(s) | 1214 |
| Bsp1286I | GDGCHC | 3 cut(s) | 253, 873, 1233 |
| Bsp143I | GATC | 3 cut(s) | 157, 1174, 1368 |
| Bsp19I | CCATGG | 1 cut(s) | 584 |
| BspACI | CCGC | 5 cut(s) | 132, 198, 362, 552, 984 |
| BspANI | GGCC | 4 cut(s) | 96, 449, 827, 955 |
| BspCNI | CTCAG | 1 cut(s) | 454 |
| BspHI | TCATGA | 2 cut(s) | 1110, 1420 |
| BspLI | GGNNCC | 2 cut(s) | 341, 927 |
| BspPI | GGATC | 1 cut(s) | 1363 |
| BspQI | GCTCTTC | 1 cut(s) | 642 |
| BspT107I | GGYRCC | 1 cut(s) | 339 |
| BspTI | CTTAAG | 1 cut(s) | 503 |
| BsrBI | CCGCTC | 1 cut(s) | 984 |
| BsrDI | GCAATG | 1 cut(s) | 231 |
| BsrI | ACTGG | 2 cut(s) | 72, 723 |
| BssECI | CCNNGG | 2 cut(s) | 584, 921 |
| BssMI | GATC | 3 cut(s) | 157, 1174, 1368 |
| BssNI | GRCGYC | 1 cut(s) | 780 |
| BssSI | CACGAG | 2 cut(s) | 153, 246 |
| BssT1I | CCWWGG | 2 cut(s) | 584, 921 |
| Bst2BI | CACGAG | 2 cut(s) | 153, 246 |
| Bst2UI | CCWGG | 3 cut(s) | 350, 642, 1373 |
| Bst4CI | ACNGT | 2 cut(s) | 1008, 1405 |
| Bst6I | CTCTTC | 4 cut(s) | 130, 320, 642, 1142 |
| BstACI | GRCGYC | 1 cut(s) | 780 |
| BstAFI | CTTAAG | 1 cut(s) | 503 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 412 |
| BstC8I | GCNNGC | 3 cut(s) | 408, 678, 825 |
| BstDEI | CTNAG | 2 cut(s) | 462, 798 |
| BstDSI | CCRYGG | 1 cut(s) | 584 |
| BstF5I | GGATG | 5 cut(s) | 238, 427, 472, 595, 1244 |
| BstHHI | GCGC | 2 cut(s) | 490, 1291 |
| BstKTI | GATC | 3 cut(s) | 160, 1177, 1371 |
| BstMAI | GTCTC | 2 cut(s) | 115, 612 |
| BstMBI | GATC | 3 cut(s) | 157, 1174, 1368 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 257, 412, 434, 446, 682, 868 |
| BstNI | CCWGG | 3 cut(s) | 350, 642, 1373 |
| BstNSI | RCATGY | 1 cut(s) | 680 |
| BstSCI | CCNGG | 3 cut(s) | 348, 640, 1371 |
| BstV1I | GCAGC | 3 cut(s) | 136, 424, 605 |
| BstX2I | RGATCY | 1 cut(s) | 1368 |
| BstYI | RGATCY | 1 cut(s) | 1368 |
| BsuRI | GGCC | 4 cut(s) | 96, 449, 827, 955 |
| BtgI | CCRYGG | 1 cut(s) | 584 |
| BtrI | CACGTC | 1 cut(s) | 724 |
| BtsCI | GGATG | 5 cut(s) | 238, 427, 472, 595, 1244 |
| BtsIMutI | CAGTG | 1 cut(s) | 716 |
| Cac8I | GCNNGC | 3 cut(s) | 408, 678, 825 |
| CciI | TCATGA | 2 cut(s) | 1110, 1420 |
| CfoI | GCGC | 2 cut(s) | 490, 1291 |
| Cfr13I | GGNCC | 3 cut(s) | 94, 826, 1435 |
| CseI | GACGC | 1 cut(s) | 788 |
| CsiI | ACCWGGT | 1 cut(s) | 348 |
| Csp6I | GTAC | 1 cut(s) | 714 |
| CviAII | CATG | 9 cut(s) | 333, 493, 537, 585, 677, 951, 1111, 1116, 1421 |
| CviQI | GTAC | 1 cut(s) | 714 |
| DdeI | CTNAG | 2 cut(s) | 462, 798 |
| DpnI | GATC | 3 cut(s) | 159, 1176, 1370 |
| DpnII | GATC | 3 cut(s) | 157, 1174, 1368 |
| Eam1104I | CTCTTC | 4 cut(s) | 130, 320, 642, 1142 |
| EarI | CTCTTC | 4 cut(s) | 130, 320, 642, 1142 |
| EciI | GGCGGA | 1 cut(s) | 147 |
| Ecl136II | GAGCTC | 1 cut(s) | 1231 |
| Eco130I | CCWWGG | 2 cut(s) | 584, 921 |
| Eco24I | GRGCYC | 1 cut(s) | 1233 |
| Eco47I | GGWCC | 1 cut(s) | 1435 |
| Eco53kI | GAGCTC | 1 cut(s) | 1231 |
| Eco88I | CYCGRG | 1 cut(s) | 1214 |
| EcoICRI | GAGCTC | 1 cut(s) | 1231 |
| EcoO109I | RGGNCCY | 1 cut(s) | 826 |
| EcoRII | CCWGG | 3 cut(s) | 348, 640, 1371 |
| EcoT14I | CCWWGG | 2 cut(s) | 584, 921 |
| EcoT38I | GRGCYC | 1 cut(s) | 1233 |
| ErhI | CCWWGG | 2 cut(s) | 584, 921 |
| Esp3I | CGTCTC | 1 cut(s) | 115 |
| FaeI | CATG | 9 cut(s) | 336, 496, 540, 588, 680, 954, 1114, 1119, 1424 |
| FaqI | GGGAC | 1 cut(s) | 1204 |
| FatI | CATG | 9 cut(s) | 332, 492, 536, 584, 676, 950, 1110, 1115, 1420 |
| FauI | CCCGC | 1 cut(s) | 977 |
| Fnu4HI | GCNGC | 4 cut(s) | 150, 362, 438, 594 |
| FokI | GGATG | 5 cut(s) | 245, 434, 479, 602, 1231 |
| FriOI | GRGCYC | 1 cut(s) | 1233 |
| Fsp4HI | GCNGC | 4 cut(s) | 150, 362, 438, 594 |
| FspBI | CTAG | 1 cut(s) | 380 |
| FspI | TGCGCA | 1 cut(s) | 1290 |
| GlaI | GCGC | 2 cut(s) | 489, 1290 |
| GluI | GCNGC | 4 cut(s) | 150, 362, 438, 594 |
| GsaI | CCCAGC | 1 cut(s) | 600 |
| GsuI | CTGGAG | 2 cut(s) | 663, 878 |
| HaeIII | GGCC | 4 cut(s) | 96, 449, 827, 955 |
| HapII | CCGG | 1 cut(s) | 129 |
| HgaI | GACGC | 1 cut(s) | 788 |
| HhaI | GCGC | 2 cut(s) | 490, 1291 |
| Hin1I | GRCGYC | 1 cut(s) | 780 |
| Hin1II | CATG | 9 cut(s) | 336, 496, 540, 588, 680, 954, 1114, 1119, 1424 |
| Hin6I | GCGC | 2 cut(s) | 488, 1289 |
| HinP1I | GCGC | 2 cut(s) | 488, 1289 |
| HincII | GTYRAC | 1 cut(s) | 69 |
| HindII | GTYRAC | 1 cut(s) | 69 |
| HindIII | AAGCTT | 1 cut(s) | 81 |
| HinfI | GANTC | 9 cut(s) | 65, 125, 178, 737, 853, 962, 1077, 1150, 1217 |
| HpaII | CCGG | 1 cut(s) | 129 |
| HphI | GGTGA | 3 cut(s) | 364, 404, 706 |
| Hpy166II | GTNNAC | 4 cut(s) | 69, 302, 716, 727 |
| Hpy188I | TCNGA | 5 cut(s) | 49, 64, 525, 736, 981 |
| Hpy188III | TCNNGA | 9 cut(s) | 122, 155, 741, 857, 866, 1074, 1111, 1214, 1421 |
| Hpy8I | GTNNAC | 4 cut(s) | 69, 302, 716, 727 |
| HpyCH4III | ACNGT | 2 cut(s) | 1008, 1405 |
| HpyCH4IV | ACGT | 3 cut(s) | 572, 723, 729 |
| HpyCH4V | TGCA | 9 cut(s) | 224, 415, 577, 593, 638, 680, 1134, 1315, 1383 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 257, 412, 434, 446, 682, 868 |
| HpyF3I | CTNAG | 2 cut(s) | 462, 798 |
| HpySE526I | ACGT | 3 cut(s) | 572, 723, 729 |
| Hsp92I | GRCGYC | 1 cut(s) | 780 |
| Hsp92II | CATG | 9 cut(s) | 336, 496, 540, 588, 680, 954, 1114, 1119, 1424 |
| HspAI | GCGC | 2 cut(s) | 488, 1289 |
| Kzo9I | GATC | 3 cut(s) | 157, 1174, 1368 |
| LguI | GCTCTTC | 1 cut(s) | 642 |
| LmnI | GCTCC | 5 cut(s) | 4, 673, 820, 859, 1228 |
| Lsp1109I | GCAGC | 3 cut(s) | 136, 424, 605 |
| LweI | GCATC | 3 cut(s) | 53, 415, 580 |
| MabI | ACCWGGT | 1 cut(s) | 348 |
| MaeI | CTAG | 1 cut(s) | 380 |
| MaeII | ACGT | 3 cut(s) | 572, 723, 729 |
| MalI | GATC | 3 cut(s) | 159, 1176, 1370 |
| MbiI | CCGCTC | 1 cut(s) | 984 |
| MboI | GATC | 3 cut(s) | 157, 1174, 1368 |
| MboII | GAAGA | 8 cut(s) | 147, 337, 659, 756, 1138, 1159, 1181, 1378 |
| MflI | RGATCY | 1 cut(s) | 1368 |
| MhlI | GDGCHC | 3 cut(s) | 253, 873, 1233 |
| MluCI | AATT | 5 cut(s) | 51, 355, 395, 628, 1089 |
| MlyI | GAGTC | 5 cut(s) | 74, 971, 1071, 1159, 1226 |
| MmeI | TCCRAC | 4 cut(s) | 49, 595, 1036, 1105 |
| MnlI | CCTC | 7 cut(s) | 131, 457, 525, 574, 752, 1320, 1344 |
| MseI | TTAA | 5 cut(s) | 504, 627, 749, 833, 887 |
| MspA1I | CMGCKG | 1 cut(s) | 596 |
| MspCI | CTTAAG | 1 cut(s) | 503 |
| MspI | CCGG | 1 cut(s) | 129 |
| MspR9I | CCNGG | 3 cut(s) | 350, 642, 1373 |
| MvaI | CCWGG | 3 cut(s) | 350, 642, 1373 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 257, 412, 434, 446, 682, 868 |
| NcoI | CCATGG | 1 cut(s) | 584 |
| NdeII | GATC | 3 cut(s) | 157, 1174, 1368 |
| NlaIII | CATG | 9 cut(s) | 336, 496, 540, 588, 680, 954, 1114, 1119, 1424 |
| NlaIV | GGNNCC | 2 cut(s) | 341, 927 |
| NsbI | TGCGCA | 1 cut(s) | 1290 |
| NspI | RCATGY | 1 cut(s) | 680 |
| PaeI | GCATGC | 1 cut(s) | 680 |
| PaeR7I | CTCGAG | 1 cut(s) | 1214 |
| PagI | TCATGA | 2 cut(s) | 1110, 1420 |
| PciSI | GCTCTTC | 1 cut(s) | 642 |
| PfeI | GAWTC | 4 cut(s) | 125, 178, 737, 853 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 289 |
| PkrI | GCNGC | 4 cut(s) | 151, 363, 439, 595 |
| PleI | GAGTC | 5 cut(s) | 73, 970, 1071, 1158, 1225 |
| PpsI | GAGTC | 5 cut(s) | 73, 970, 1071, 1158, 1225 |
| PsiI | TTATAA | 1 cut(s) | 1362 |
| Psp124BI | GAGCTC | 1 cut(s) | 1233 |
| Psp6I | CCWGG | 3 cut(s) | 348, 640, 1371 |
| PspFI | CCCAGC | 1 cut(s) | 596 |
| PspGI | CCWGG | 3 cut(s) | 348, 640, 1371 |
| PspN4I | GGNNCC | 2 cut(s) | 341, 927 |
| PspPI | GGNCC | 3 cut(s) | 94, 826, 1435 |
| PsuI | RGATCY | 1 cut(s) | 1368 |
| PvuII | CAGCTG | 1 cut(s) | 596 |
| RsaI | GTAC | 1 cut(s) | 715 |
| RsaNI | GTAC | 1 cut(s) | 714 |
| SacI | GAGCTC | 1 cut(s) | 1233 |
| SapI | GCTCTTC | 1 cut(s) | 642 |
| SaqAI | TTAA | 5 cut(s) | 504, 627, 749, 833, 887 |
| SatI | GCNGC | 4 cut(s) | 150, 362, 438, 594 |
| Sau3AI | GATC | 3 cut(s) | 157, 1174, 1368 |
| Sau96I | GGNCC | 3 cut(s) | 94, 826, 1435 |
| SchI | GAGTC | 5 cut(s) | 74, 971, 1071, 1159, 1226 |
| ScrFI | CCNGG | 3 cut(s) | 350, 642, 1373 |
| SduI | GDGCHC | 3 cut(s) | 253, 873, 1233 |
| SexAI | ACCWGGT | 1 cut(s) | 348 |
| SfaNI | GCATC | 3 cut(s) | 53, 415, 580 |
| Sfr274I | CTCGAG | 1 cut(s) | 1214 |
| SinI | GGWCC | 1 cut(s) | 1435 |
| SlaI | CTCGAG | 1 cut(s) | 1214 |
| SmlI | CTYRAG | 5 cut(s) | 503, 509, 565, 866, 1214 |
| SmoI | CTYRAG | 5 cut(s) | 503, 509, 565, 866, 1214 |
| SphI | GCATGC | 1 cut(s) | 680 |
| Sse9I | AATT | 5 cut(s) | 51, 355, 395, 628, 1089 |
| SsiI | CCGC | 5 cut(s) | 132, 198, 362, 552, 984 |
| SspMI | CTAG | 1 cut(s) | 380 |
| SstI | GAGCTC | 1 cut(s) | 1233 |
| StyD4I | CCNGG | 3 cut(s) | 348, 640, 1371 |
| StyI | CCWWGG | 2 cut(s) | 584, 921 |
| TaaI | ACNGT | 2 cut(s) | 1008, 1405 |
| TaiI | ACGT | 3 cut(s) | 575, 726, 732 |
| TaqI | TCGA | 2 cut(s) | 1124, 1215 |
| TaqII | GACCGA | 1 cut(s) | 1423 |
| TasI | AATT | 5 cut(s) | 51, 355, 395, 628, 1089 |
| TauI | GCSGC | 1 cut(s) | 364 |
| TfiI | GAWTC | 4 cut(s) | 125, 178, 737, 853 |
| Tru1I | TTAA | 5 cut(s) | 504, 627, 749, 833, 887 |
| Tru9I | TTAA | 5 cut(s) | 504, 627, 749, 833, 887 |
| TscAI | CASTG | 1 cut(s) | 723 |
| TseI | GCWGC | 3 cut(s) | 149, 437, 593 |
| TspDTI | ATGAA | 7 cut(s) | 242, 321, 324, 939, 1409, 1413, 1437 |
| TspGWI | ACGGA | 2 cut(s) | 771, 855 |
| TspRI | CASTG | 1 cut(s) | 723 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 289 |
| Vha464I | CTTAAG | 1 cut(s) | 503 |
| VpaK11BI | GGWCC | 1 cut(s) | 1435 |
| XapI | RAATTY | 2 cut(s) | 355, 395 |
| XceI | RCATGY | 1 cut(s) | 680 |
| XhoI | CTCGAG | 1 cut(s) | 1214 |
| XspI | CTAG | 1 cut(s) | 380 |