Rorug03G0239800

Protein SET DOMAIN GROUP

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0009980
Physical Location & Seq
Forward (+)
22441186 .. 22443864
2679 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0239800.1

Sequence Viewer

Length: 2001 bp
ATGAGCAGGATGCAGTTTTATTCACTTCAAACCTTTGCATTCTTACTAGCTCTTTTGTGTTGTGCTCTTATTCGAGCAGGGTGCTTGAATTTCAGCTATCCAACATTTCAAGACAAAGTGGATGAAAAGGATTTTATCCTATCCACAAATTCAAGCATATATTTAAATGCCATCCAAGTCACTCATGATGCTACTCATGCTTCCATCAACAACGAATCTGGAAGGTTTCTATATAAGAAGCGATTCAGGTTGTGGGGAGATGGTCGTCGGAACAAAGCATCCTTTAGCACTATGTTCAATATTAACATCAGTAACAAAACCAATCCGGGTGCTGAAGGCCTGGCCTTTATCTTAACTGCCAACTCTACTCTTCCGGAGAATAGCAATGGACAATGGCTTGGAATTGTAAATGCAAATTCCAATGGATCTGATCGAGCCAAAATTGTGGCGGTAGAGTTTGACACAAGTAAAAGCTACGAGCAAGATCTCGATGACAACCATGTGGGTGTGGATGTAAATAGCATTTACTCTCTCAAACAAGAGAGTTTGACAAGATATGGCATCAGGCTTTCAAGCAGTGTCAGTTATGCAGTGACAATTCAGTATGACAGCCAGAACCTCACCATATTTGTCTTCCACACCAAGGAAACTGGGGAGCAAATGAAGGATCAAGTTCTGTCCCTTCCTCTTGATCTCTCTGACTATCTTCCGGAGAAGGTTTATGTGGGATTCTCAGCTTCCACGGGCAACAACACTCAATTGAATTGCATACAGTCTTGGAACTTCACCTCTTCACATATAGATGAAAATCCAAACCTTCTGTGGGTTTGGATAGCAATCCCAGCAGCAGCAGTAATGGTCCTCCTAGCAGGAGTTGCTTCTTACTTCTACTGGAGAAGACAGCGTGAAAATAAATTACTGGAGGATGCATTTCCCGGGATAGAAGATGAGATTCAAAGCACTGCCATGGCTCCAAAAAAATTCAAACTGAAAGAACTTCAAAAAGCAACAGGCAGGTTCAATCCAAAGAACAAGCTTGGAAAAGGTGGCTTTGGAACAGTATATAAGGGACTCTTGGGAAATAAAGAGATAGCAGTCAAGAGAGTCTCAAAGGATTCACGTCAAGGCAAGCAAGAATTCATAGCAGAAGTCACCACAATAGGCAGTCTTCGTCACAAAAATTTGGTTAAATTGATTGGATGGTGCTATGAAAGCCATGAGCTTCTTATTGTGTATGAGTTGATGCCAAATGGAAGCCTTGACAGATTCCTATTTGGGAATGACAAGTTAGGCAGAGAGATGGAGGAACCACCACTGAGCTGGAAGAGAAGGCACAGCATCATAAGCGGGGTAGCTCAGGCACTAGATTATCTTCACAATGGATGCGAGAAGAGAGTACTCCACCGAGACATAAAAGCCAGCAATATCATGTTAGACTCGGATTTCACTGCACGGCTGGGAGACTTTGGACTAGCTCGTACACTTCAGCAAAGTGAAGTAACTCACCACTCCACCAAAGAGATTGCAGGAACACTAGGTTATATGGCTCCAGAAACATTTCTTACAGCAAGGGCTACAGTTGAAACAGATGTCTATGCATTTGGTGTTCTTGTGCTAGAAGTCGTCTGTGGAAGAAGGCCAGCTGGAAATCAACTTGAGCAGAGTAACTACAATAATAGCATAGTTTATTGGCTATGGGATCTTTACAGCAGGGGAAAGATCCTTGATGCTGTGGACTCAAGATTGGATGGAGACACTGATGAGGATGATATGGTGTCCGTGCTGACTTTGGGGTTAGCCTGTTGCCATCCCAACCCACATCAGAGGCCTTCCATGAGAACTGTCCTGAAGGTTCTTACAAGGGAAGCAGATCCACCATCGTTGCCAACTGAAAGACCGGCTTTTGTATGGCCATCCATGCCTCCATCATTCAAAAAGGACACAGAATCTGATTTAGATGGAGGTCGACTTACTCCATTCACAGAAATCTCTGGAAGATGA

Protein Analysis

666

Amino Acids

74.76

Weight (kDa)

6.56

Isoelectric Point (pI)

42.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 29 - 271 1.1e-67 Legume lectin domain
Lectin_L-type_dom PF18483 69 - 257 4e-07 Legume lectin beta-barrel domain
Pkinase PF00069 341 - 617 1.8e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 343 - 618 8.5e-50 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0009980)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G17240 AT5G17240
fragaria_vesca FvH4_1g27420
malus_domestica MD07G1015500.v1.1 MD17G1287300.v1.1
prunus_persica Prupe.3G014000_v2.0.a1
pyrus_communis pycom07g01180 pycom07g01780 pycom07g01830 pycom07g01860
rosa_chinensis RchiOBHm_Chr3g0488621
rosa_laevigata RLG00000022939
rosa_multiflora Rmu_sc0005363.1_g000050
rosa_roxburghii Rroxscaffold_6G00394090
rosa_rugosa Rorug03G0239700 Rorug03G0239800
rosa_samantha Rh3AG288600 Rh3BG325300 Rh3CG322900 Rh3DG321600
rosa_wichuraiana Rw3G025540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1005
AccI GTMKAC 1 cut(s) 1966
AccIII TCCGGA 2 cut(s) 373, 709
AciI CCGC 2 cut(s) 449, 1347
AclWI GGATC 5 cut(s) 433, 675, 1707, 1714, 1865
AcoI YGGCCR 1 cut(s) 1910
AcsI RAATTY 6 cut(s) 88, 148, 415, 980, 1136, 1180
AcuI CTGAAG 3 cut(s) 354, 1469, 1868
AfaI GTAC 2 cut(s) 1398, 1480
AfiI CCNNNNNNNGG 2 cut(s) 643, 823
AjiI CACGTC 1 cut(s) 1121
AjnI CCWGG 1 cut(s) 339
AloI GAACNNNNNNTCC 2 cut(s) 263, 295
Alw21I GWGCWC 1 cut(s) 67
Alw26I GTCTC 4 cut(s) 1111, 1401, 1455, 1746
AlwI GGATC 5 cut(s) 433, 675, 1707, 1714, 1865
AlwNI CAGNNNCTG 1 cut(s) 1949
Ama87I CYCGRG 1 cut(s) 935
Aor13HI TCCGGA 2 cut(s) 373, 709
AoxI GGCC 5 cut(s) 337, 342, 1637, 1826, 1910
ApeKI GCWGC 2 cut(s) 845, 848
ApoI RAATTY 6 cut(s) 88, 148, 415, 980, 1136, 1180
Asp700I GAANNNNTTC 2 cut(s) 242, 1557
AspS9I GGNCC 1 cut(s) 859
AsuC2I CCSGG 3 cut(s) 327, 936, 937
AsuHPI GGTGA 4 cut(s) 613, 778, 1144, 1496
AvaI CYCGRG 1 cut(s) 935
AvaII GGWCC 1 cut(s) 859
BalI TGGCCA 1 cut(s) 1912
BbsI GAAGAC 3 cut(s) 625, 904, 1160
Bbv12I GWGCWC 1 cut(s) 67
BbvI GCAGC 2 cut(s) 857, 860
BceAI ACGGC 1 cut(s) 1469
BcgI CGANNNNNNTGC 2 cut(s) 63, 97
BciT130I CCWGG 1 cut(s) 341
BcnI CCSGG 3 cut(s) 327, 936, 937
BcoDI GTCTC 4 cut(s) 1111, 1401, 1455, 1746
BfaI CTAG 6 cut(s) 47, 866, 1364, 1472, 1535, 1616
BfmI CTRYAG 1 cut(s) 1575
BfuAI ACCTGC 1 cut(s) 1005
BglII AGATCT 1 cut(s) 484
BisI GCNGC 2 cut(s) 846, 849
BlsI GCNGC 2 cut(s) 847, 850
BmcAI AGTACT 1 cut(s) 1398
Bme1390I CCNGG 4 cut(s) 327, 341, 936, 937
Bme18I GGWCC 1 cut(s) 859
BmeT110I CYCGRG 1 cut(s) 935
BmgBI CACGTC 1 cut(s) 1121
BmgT120I GGNCC 1 cut(s) 859
BmiI GGNNCC 3 cut(s) 972, 1308, 1548
BmrFI CCNGG 4 cut(s) 327, 341, 936, 937
BmrI ACTGGG 1 cut(s) 660
BmsI GCATC 8 cut(s) 178, 287, 570, 916, 1233, 1347, 1373, 1717
BmuI ACTGGG 1 cut(s) 660
BpiI GAAGAC 3 cut(s) 625, 904, 1160
BpmI CTGGAG 3 cut(s) 913, 941, 1533
Bpu10I CCTNAGC 1 cut(s) 1356
BpuEI CTTGAG 2 cut(s) 1676, 1723
BpuMI CCSGG 3 cut(s) 327, 936, 937
BsaBI GATNNNNATC 2 cut(s) 807, 836
BsaJI CCNNGG 4 cut(s) 642, 741, 935, 966
BsaWI WCCGGW 2 cut(s) 373, 709
Bsc4I CCNNNNNNNGG 2 cut(s) 643, 823
Bse118I RCCGGY 1 cut(s) 1897
Bse1I ACTGG 3 cut(s) 655, 896, 924
Bse3DI GCAATG 1 cut(s) 391
Bse8I GATNNNNATC 2 cut(s) 807, 836
BseAI TCCGGA 2 cut(s) 373, 709
BseBI CCWGG 1 cut(s) 341
BseDI CCNNGG 4 cut(s) 642, 741, 935, 966
BseJI GATNNNNATC 2 cut(s) 807, 836
BseLI CCNNNNNNNGG 2 cut(s) 643, 823
BseMI GCAATG 1 cut(s) 391
BseMII CTCAG 3 cut(s) 747, 1307, 1370
BseNI ACTGG 3 cut(s) 655, 896, 924
BseXI GCAGC 2 cut(s) 857, 860
BseYI CCCAGC 2 cut(s) 841, 1456
BsgI GTGCAG 1 cut(s) 1434
BshFI GGCC 5 cut(s) 339, 344, 1639, 1828, 1912
BsiHKAI GWGCWC 1 cut(s) 67
BsiHKCI CYCGRG 1 cut(s) 935
BsiSI CCGG 5 cut(s) 326, 374, 710, 936, 1898
BslFI GGGAC 2 cut(s) 664, 1083
BslI CCNNNNNNNGG 2 cut(s) 643, 823
BsmAI GTCTC 4 cut(s) 1111, 1401, 1455, 1746
BsmFI GGGAC 2 cut(s) 664, 1083
BsmI GAATGC 1 cut(s) 38
BsnI GGCC 5 cut(s) 339, 344, 1639, 1828, 1912
BsoBI CYCGRG 1 cut(s) 935
Bsp1286I GDGCHC 1 cut(s) 67
Bsp13I TCCGGA 2 cut(s) 373, 709
Bsp143I GATC 8 cut(s) 425, 430, 484, 667, 691, 1699, 1719, 1870
Bsp19I CCATGG 1 cut(s) 966
BspACI CCGC 2 cut(s) 449, 1347
BspANI GGCC 5 cut(s) 339, 344, 1639, 1828, 1912
BspCNI CTCAG 3 cut(s) 746, 1308, 1369
BspEI TCCGGA 2 cut(s) 373, 709
BspHI TCATGA 1 cut(s) 184
BspLI GGNNCC 3 cut(s) 972, 1308, 1548
BspMI ACCTGC 1 cut(s) 1005
BspPI GGATC 5 cut(s) 433, 675, 1707, 1714, 1865
BsrDI GCAATG 1 cut(s) 391
BsrFI RCCGGY 1 cut(s) 1897
BsrI ACTGG 3 cut(s) 655, 896, 924
BssAI RCCGGY 1 cut(s) 1897
BssECI CCNNGG 4 cut(s) 642, 741, 935, 966
BssMI GATC 8 cut(s) 425, 430, 484, 667, 691, 1699, 1719, 1870
BssT1I CCWWGG 2 cut(s) 642, 966
Bst2UI CCWGG 1 cut(s) 341
Bst4CI ACNGT 4 cut(s) 774, 1060, 1579, 1843
Bst6I CTCTTC 4 cut(s) 375, 796, 1319, 1385
BstAPI GCANNNNNTGC 1 cut(s) 875
BstC8I GCNNGC 3 cut(s) 1130, 1420, 1641
BstDEI CTNAG 3 cut(s) 733, 1316, 1356
BstDSI CCRYGG 2 cut(s) 741, 966
BstKTI GATC 8 cut(s) 428, 433, 487, 670, 694, 1702, 1722, 1873
BstMAI GTCTC 4 cut(s) 1111, 1401, 1455, 1746
BstMBI GATC 8 cut(s) 425, 430, 484, 667, 691, 1699, 1719, 1870
BstMWI GCNNNNNNNGC 6 cut(s) 197, 842, 875, 1212, 1344, 1918
BstNI CCWGG 1 cut(s) 341
BstSCI CCNGG 4 cut(s) 325, 339, 934, 935
BstSFI CTRYAG 1 cut(s) 1575
BstV1I GCAGC 2 cut(s) 857, 860
BstV2I GAAGAC 3 cut(s) 625, 904, 1160
BstX2I RGATCY 5 cut(s) 425, 484, 1699, 1719, 1870
BstXI CCANNNNNNTGG 2 cut(s) 445, 1320
BstYI RGATCY 5 cut(s) 425, 484, 1699, 1719, 1870
BsuRI GGCC 5 cut(s) 339, 344, 1639, 1828, 1912
BtgI CCRYGG 2 cut(s) 741, 966
BtrI CACGTC 1 cut(s) 1121
BtsI GCAGTG 4 cut(s) 583, 597, 960, 1446
BtsIMutI CAGTG 6 cut(s) 583, 597, 960, 1313, 1446, 1755
BveI ACCTGC 1 cut(s) 1005
Cac8I GCNNGC 3 cut(s) 1130, 1420, 1641
CaiI CAGNNNCTG 1 cut(s) 1949
CciI TCATGA 1 cut(s) 184
Cfr10I RCCGGY 1 cut(s) 1897
Cfr13I GGNCC 1 cut(s) 859
Cfr9I CCCGGG 1 cut(s) 935
Csp6I GTAC 2 cut(s) 1397, 1479
CspCI CAANNNNNGTGG 2 cut(s) 1863, 1898
CviAII CATG 8 cut(s) 185, 197, 500, 967, 1217, 1429, 1834, 1918
CviQI GTAC 2 cut(s) 1397, 1479
DdeI CTNAG 3 cut(s) 733, 1316, 1356
DpnI GATC 8 cut(s) 427, 432, 486, 669, 693, 1701, 1721, 1872
DpnII GATC 8 cut(s) 425, 430, 484, 667, 691, 1699, 1719, 1870
DraI TTTAAA 1 cut(s) 165
EaeI YGGCCR 1 cut(s) 1910
Eam1104I CTCTTC 4 cut(s) 375, 796, 1319, 1385
EarI CTCTTC 4 cut(s) 375, 796, 1319, 1385
Eco130I CCWWGG 2 cut(s) 642, 966
Eco147I AGGCCT 2 cut(s) 339, 1828
Eco47I GGWCC 1 cut(s) 859
Eco57I CTGAAG 3 cut(s) 354, 1469, 1868
Eco88I CYCGRG 1 cut(s) 935
EcoRI GAATTC 1 cut(s) 1136
EcoRII CCWGG 1 cut(s) 339
EcoT14I CCWWGG 2 cut(s) 642, 966
EcoT22I ATGCAT 2 cut(s) 931, 1600
ErhI CCWWGG 2 cut(s) 642, 966
FaeI CATG 8 cut(s) 188, 200, 503, 970, 1220, 1432, 1837, 1921
FalI AAGNNNNNCTT 4 cut(s) 1058, 1090, 1885, 1917
FaqI GGGAC 2 cut(s) 664, 1083
FatI CATG 8 cut(s) 184, 196, 499, 966, 1216, 1428, 1833, 1917
FauI CCCGC 1 cut(s) 1340
FblI GTMKAC 1 cut(s) 1966
Fnu4HI GCNGC 2 cut(s) 846, 849
Fsp4HI GCNGC 2 cut(s) 846, 849
FspBI CTAG 6 cut(s) 47, 866, 1364, 1472, 1535, 1616
GluI GCNGC 2 cut(s) 846, 849
GsaI CCCAGC 2 cut(s) 845, 1460
GsuI CTGGAG 3 cut(s) 913, 941, 1533
HaeIII GGCC 5 cut(s) 339, 344, 1639, 1828, 1912
HapII CCGG 5 cut(s) 326, 374, 710, 936, 1898
Hin1II CATG 8 cut(s) 188, 200, 503, 970, 1220, 1432, 1837, 1921
HincII GTYRAC 1 cut(s) 1967
HindII GTYRAC 1 cut(s) 1967
HindIII AAGCTT 1 cut(s) 1034
HpaII CCGG 5 cut(s) 326, 374, 710, 936, 1898
HphI GGTGA 4 cut(s) 613, 778, 1144, 1496
Hpy166II GTNNAC 3 cut(s) 1481, 1735, 1967
Hpy188I TCNGA 6 cut(s) 270, 430, 700, 1441, 1824, 1951
Hpy8I GTNNAC 3 cut(s) 1481, 1735, 1967
Hpy99I CGWCG 1 cut(s) 270
HpyCH4III ACNGT 4 cut(s) 774, 1060, 1579, 1843
HpyCH4IV ACGT 1 cut(s) 1120
HpyCH4V TGCA 9 cut(s) 13, 38, 413, 590, 768, 929, 1451, 1526, 1598
HpyF10VI GCNNNNNNNGC 6 cut(s) 197, 842, 875, 1212, 1344, 1918
HpyF3I CTNAG 3 cut(s) 733, 1316, 1356
HpySE526I ACGT 1 cut(s) 1120
Hsp92II CATG 8 cut(s) 188, 200, 503, 970, 1220, 1432, 1837, 1921
Kpn2I TCCGGA 2 cut(s) 373, 709
Kzo9I GATC 8 cut(s) 425, 430, 484, 667, 691, 1699, 1719, 1870
LmnI GCTCC 3 cut(s) 655, 976, 1552
Lsp1109I GCAGC 2 cut(s) 857, 860
LweI GCATC 8 cut(s) 178, 287, 570, 916, 1233, 1347, 1373, 1717
MaeI CTAG 6 cut(s) 47, 866, 1364, 1472, 1535, 1616
MaeII ACGT 1 cut(s) 1120
MaeIII GTNAC 7 cut(s) 178, 311, 592, 1150, 1172, 1498, 1664
MalI GATC 8 cut(s) 427, 432, 486, 669, 693, 1701, 1721, 1872
MboI GATC 8 cut(s) 425, 430, 484, 667, 691, 1699, 1719, 1870
MfeI CAATTG 1 cut(s) 758
MflI RGATCY 5 cut(s) 425, 484, 1699, 1719, 1870
MhlI GDGCHC 1 cut(s) 67
MlsI TGGCCA 1 cut(s) 1912
MluNI TGGCCA 1 cut(s) 1912
MlyI GAGTC 4 cut(s) 1065, 1113, 1430, 1730
MmeI TCCRAC 2 cut(s) 125, 248
Mox20I TGGCCA 1 cut(s) 1912
Mph1103I ATGCAT 2 cut(s) 931, 1600
MroI TCCGGA 2 cut(s) 373, 709
MroXI GAANNNNTTC 2 cut(s) 242, 1557
MscI TGGCCA 1 cut(s) 1912
MseI TTAA 4 cut(s) 164, 303, 353, 1188
MslI CAYNNNNRTG 3 cut(s) 504, 801, 965
Msp20I TGGCCA 1 cut(s) 1912
MspA1I CMGCKG 1 cut(s) 1643
MspI CCGG 5 cut(s) 326, 374, 710, 936, 1898
MspR9I CCNGG 4 cut(s) 327, 341, 936, 937
MunI CAATTG 1 cut(s) 758
Mva1269I GAATGC 1 cut(s) 38
MvaI CCWGG 1 cut(s) 341
MwoI GCNNNNNNNGC 6 cut(s) 197, 842, 875, 1212, 1344, 1918
NciI CCSGG 3 cut(s) 327, 936, 937
NcoI CCATGG 1 cut(s) 966
NdeII GATC 8 cut(s) 425, 430, 484, 667, 691, 1699, 1719, 1870
NlaIII CATG 8 cut(s) 188, 200, 503, 970, 1220, 1432, 1837, 1921
NlaIV GGNNCC 3 cut(s) 972, 1308, 1548
NmuCI GTSAC 4 cut(s) 178, 592, 1150, 1172
NsiI ATGCAT 2 cut(s) 931, 1600
PagI TCATGA 1 cut(s) 184
PceI AGGCCT 2 cut(s) 339, 1828
PctI GAATGC 1 cut(s) 38
PdmI GAANNNNTTC 2 cut(s) 242, 1557
PfeI GAWTC 7 cut(s) 215, 243, 729, 952, 1115, 1266, 1946
PkrI GCNGC 2 cut(s) 847, 850
PleI GAGTC 4 cut(s) 1065, 1112, 1430, 1730
PpsI GAGTC 4 cut(s) 1065, 1112, 1430, 1730
Psp6I CCWGG 1 cut(s) 339
PspFI CCCAGC 2 cut(s) 841, 1456
PspGI CCWGG 1 cut(s) 339
PspN4I GGNNCC 3 cut(s) 972, 1308, 1548
PspPI GGNCC 1 cut(s) 859
PstNI CAGNNNCTG 1 cut(s) 1949
PsuI RGATCY 5 cut(s) 425, 484, 1699, 1719, 1870
PvuII CAGCTG 1 cut(s) 1643
RsaI GTAC 2 cut(s) 1398, 1480
RsaNI GTAC 2 cut(s) 1397, 1479
RseI CAYNNNNRTG 3 cut(s) 504, 801, 965
SalI GTCGAC 1 cut(s) 1965
SaqAI TTAA 4 cut(s) 164, 303, 353, 1188
SatI GCNGC 2 cut(s) 846, 849
Sau3AI GATC 8 cut(s) 425, 430, 484, 667, 691, 1699, 1719, 1870
Sau96I GGNCC 1 cut(s) 859
ScaI AGTACT 1 cut(s) 1398
SchI GAGTC 4 cut(s) 1065, 1113, 1430, 1730
ScrFI CCNGG 4 cut(s) 327, 341, 936, 937
SduI GDGCHC 1 cut(s) 67
SfaNI GCATC 8 cut(s) 178, 287, 570, 916, 1233, 1347, 1373, 1717
SfcI CTRYAG 1 cut(s) 1575
SinI GGWCC 1 cut(s) 859
SmaI CCCGGG 1 cut(s) 937
SmiI ATTTAAAT 1 cut(s) 165
SmiMI CAYNNNNRTG 3 cut(s) 504, 801, 965
SmlI CTYRAG 2 cut(s) 1655, 1738
SmoI CTYRAG 2 cut(s) 1655, 1738
SseBI AGGCCT 2 cut(s) 339, 1828
SsiI CCGC 2 cut(s) 449, 1347
SspI AATATT 1 cut(s) 301
SspMI CTAG 6 cut(s) 47, 866, 1364, 1472, 1535, 1616
StuI AGGCCT 2 cut(s) 339, 1828
StyD4I CCNGG 4 cut(s) 325, 339, 934, 935
StyI CCWWGG 2 cut(s) 642, 966
SwaI ATTTAAAT 1 cut(s) 165
TaaI ACNGT 4 cut(s) 774, 1060, 1579, 1843
TaiI ACGT 1 cut(s) 1123
TaqI TCGA 4 cut(s) 73, 433, 489, 1966
TatI WGTACW 1 cut(s) 1396
TfiI GAWTC 7 cut(s) 215, 243, 729, 952, 1115, 1266, 1946
Tru1I TTAA 4 cut(s) 164, 303, 353, 1188
Tru9I TTAA 4 cut(s) 164, 303, 353, 1188
TscAI CASTG 6 cut(s) 583, 597, 967, 1320, 1453, 1762
TseFI GTSAC 4 cut(s) 178, 592, 1150, 1172
TseI GCWGC 2 cut(s) 845, 848
Tsp45I GTSAC 4 cut(s) 178, 592, 1150, 1172
TspDTI ATGAA 5 cut(s) 138, 677, 819, 1129, 1224
TspGWI ACGGA 1 cut(s) 1768
TspMI CCCGGG 1 cut(s) 935
TspRI CASTG 6 cut(s) 583, 597, 967, 1320, 1453, 1762
VpaK11BI GGWCC 1 cut(s) 859
XapI RAATTY 6 cut(s) 88, 148, 415, 980, 1136, 1180
XcmI CCANNNNNNNNNTGG 2 cut(s) 819, 1317
XmaI CCCGGG 1 cut(s) 935
XmiI GTMKAC 1 cut(s) 1966
XmnI GAANNNNTTC 2 cut(s) 242, 1557
XspI CTAG 6 cut(s) 47, 866, 1364, 1472, 1535, 1616
ZrmI AGTACT 1 cut(s) 1398
Zsp2I ATGCAT 2 cut(s) 931, 1600
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.